Tspan1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 116,019,078 - 116,024,818 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 116,019,066 - 116,024,798 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 116,161,881 - 116,167,621 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 116,161,869 - 116,167,601 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 115,834,486 - 115,840,203 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 115,659,813 - 115,665,530 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 114,900,039 - 114,905,756 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | D1 | NCBI | | | | | cM Map | 4 | 53.1 | NCBI | | | | |
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TSPAN1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 46,175,087 - 46,196,489 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 46,175,073 - 46,185,962 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 46,640,759 - 46,651,634 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 46,418,799 - 46,424,217 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 46,358,231 - 46,363,650 | NCBI | | | | | Celera | 1 | 44,928,039 - 44,938,924 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p34.1 | NCBI | | | | | HuRef | 1 | 44,755,698 - 44,766,611 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 46,757,853 - 46,768,753 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 46,052,282 - 46,073,710 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Tspan1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 134,883,704 - 134,896,083 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 129,646,139 - 129,659,383 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 129,646,993 - 129,652,017 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 132,263,207 - 132,268,231 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 134,017,795 - 134,022,819 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 134,040,231 - 134,045,255 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 135,019,206 - 135,032,412 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 135,019,778 - 135,025,084 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 138,803,950 - 138,816,295 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 136,442,094 - 136,447,120 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 136,447,320 - 136,452,346 (-) | NCBI | | | | | Celera | 5 | 128,175,301 - 128,180,327 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q35 | NCBI | | | | |
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Tspan1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955464 | 12,090,038 - 12,094,827 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955464 | 12,089,589 - 12,095,000 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TSPAN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 180,619,345 - 180,632,757 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 179,758,371 - 179,774,326 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 45,479,917 - 45,492,115 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 46,835,952 - 46,846,828 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 46,835,952 - 46,846,828 (+) | Ensembl | panpan1.1 | | panPan2 | |
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TSPAN1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 15 | 14,189,271 - 14,201,679 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 15 | 14,189,658 - 14,200,245 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 15 | 14,311,180 - 14,323,575 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 14,341,630 - 14,354,033 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 14,342,017 - 14,346,887 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 15 | 14,142,702 - 14,155,084 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 14,211,184 - 14,223,571 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 14,280,818 - 14,293,196 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tspan1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405058 | 61,346,745 - 61,401,991 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936474 | 27,221,586 - 27,227,015 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936474 | 27,221,691 - 27,227,226 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TSPAN1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 6 | 165,224,622 - 165,230,217 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 165,224,619 - 165,229,516 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 152,704,086 - 152,708,999 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TSPAN1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 86,599,933 - 86,613,244 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 86,599,214 - 86,605,426 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 30,375,246 - 30,386,795 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tspan1 (Heterocephalus glaber - naked mole-rat) |
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