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Gene: Nat9 (N-acetyltransferase 9 (GCN5-related, putative)) Mus musculus

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Symbol:

Nat9

Name:

N-acetyltransferase 9 (GCN5-related, putative)

RGD ID:

1551508

MGI Page

MGI

Description:

Predicted to enable tubulin N-terminal-methionine acetyltransferase activity. Predicted to be part of protein-containing complex. Is expressed in embryo. Orthologous to human NAT9 (N-acetyltransferase 9).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

1110028N05Rik; alpha/beta-tubulin-N-acetyltransferase 9; N-acetyltransferase 9; novel acetyltransferase protein; RP23-342L24.5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NAT9 (N-acetyltransferase 9)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Nat9 (N-acetyltransferase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nat9 (N-acetyltransferase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NAT9 (N-acetyltransferase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NAT9 (N-acetyltransferase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nat9 (N-acetyltransferase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NAT9 (N-acetyltransferase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NAT9 (N-acetyltransferase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nat9 (N-acetyltransferase 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Nat9 (N-acetyltransferase 9)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	NAT9 (N-acetyltransferase 9)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	nat9 (N-acetyltransferase 9 (GCN5-related, putative))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Drosophila melanogaster (fruit fly):	CG11539	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	Y67D2.5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	nat9	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	115,073,655 - 115,078,682 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	115,073,658 - 115,078,685 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	115,182,829 - 115,187,856 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	115,182,832 - 115,187,859 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	115,044,146 - 115,048,630 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	114,998,922 - 115,003,406 (-)	NCBI		MGSCv36	mm8
Celera	11	126,948,071 - 126,952,549 (-)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	80.68	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Nat9	Mouse	1,2-dimethylhydrazine	increases expression	EXP		6480464	1 and 2-Dimethylhydrazine results in increased expression of NAT9 mRNA	CTD	PMID:22206623
Nat9	Mouse	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	NAT9 (Homo sapiens)	6480464	Tetrachlorodibenzodioxin results in decreased expression of NAT9 mRNA	CTD	PMID:23152189
Nat9	Mouse	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Nat9 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of NAT9 mRNA	CTD	PMID:33387578
Nat9	Mouse	2,4-dinitrotoluene	affects expression	ISO	Nat9 (Rattus norvegicus)	6480464	2 and 4-dinitrotoluene affects the expression of NAT9 mRNA	CTD	PMID:21346803
Nat9	Mouse	3-isobutyl-1-methyl-7H-xanthine	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of NAT9 mRNA	CTD	PMID:28628672
Nat9	Mouse	acrylamide	decreases expression	ISO	NAT9 (Homo sapiens)	6480464	Acrylamide results in decreased expression of NAT9 mRNA	CTD	PMID:32763439
Nat9	Mouse	afimoxifene	decreases expression	ISO	NAT9 (Homo sapiens)	6480464	afimoxifene results in decreased expression of NAT9 mRNA	CTD	PMID:16849584
Nat9	Mouse	bisphenol A	decreases expression	ISO	Nat9 (Rattus norvegicus)	6480464	bisphenol A results in decreased expression of NAT9 mRNA	CTD	PMID:25181051 more ...
Nat9	Mouse	bisphenol A	affects expression	ISO	NAT9 (Homo sapiens)	6480464	bisphenol A affects the expression of NAT9 mRNA	CTD	PMID:30903817
Nat9	Mouse	bisphenol A	decreases methylation	EXP		6480464	bisphenol A results in decreased methylation of NAT9 promoter	CTD	PMID:27312807
Nat9	Mouse	bisphenol F	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of NAT9 mRNA	CTD	PMID:28628672
Nat9	Mouse	bisphenol F	decreases expression	EXP		6480464	bisphenol F results in decreased expression of NAT9 mRNA	CTD	PMID:38685157
Nat9	Mouse	cadmium atom	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of NAT9 mRNA	CTD	PMID:35301059
Nat9	Mouse	cadmium dichloride	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of NAT9 mRNA	CTD	PMID:35301059
Nat9	Mouse	CGP 52608	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to NAT9 gene]	CTD	PMID:28238834
Nat9	Mouse	cyclosporin A	increases expression	ISO	NAT9 (Homo sapiens)	6480464	Cyclosporine results in increased expression of NAT9 mRNA	CTD	PMID:20106945 and PMID:25562108
Nat9	Mouse	dexamethasone	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of NAT9 mRNA	CTD	PMID:28628672
Nat9	Mouse	doxorubicin	increases expression	ISO	NAT9 (Homo sapiens)	6480464	Doxorubicin results in increased expression of NAT9 mRNA	CTD	PMID:29803840
Nat9	Mouse	ethanol	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	[[Gasoline co-treated with Ethanol] results in increased abundance of [Particulate Matter co-treated with Polycyclic Aromatic Hydrocarbons]] which results in increased expression of NAT9 mRNA	CTD	PMID:29432896
Nat9	Mouse	glafenine	increases expression	ISO	Nat9 (Rattus norvegicus)	6480464	Glafenine results in increased expression of NAT9 mRNA	CTD	PMID:24136188
Nat9	Mouse	indometacin	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of NAT9 mRNA	CTD	PMID:28628672
Nat9	Mouse	paracetamol	affects expression	EXP		6480464	Acetaminophen affects the expression of NAT9 mRNA	CTD	PMID:17562736
Nat9	Mouse	paracetamol	increases expression	ISO	Nat9 (Rattus norvegicus)	6480464	Acetaminophen results in increased expression of NAT9 mRNA	CTD	PMID:33387578
Nat9	Mouse	perfluorononanoic acid	increases expression	ISO	NAT9 (Homo sapiens)	6480464	perfluoro-n-nonanoic acid results in increased expression of NAT9 mRNA	CTD	PMID:32588087
Nat9	Mouse	quercetin	increases expression	ISO	NAT9 (Homo sapiens)	6480464	Quercetin results in increased expression of NAT9 mRNA	CTD	PMID:21632981
Nat9	Mouse	resveratrol	multiple interactions	ISO	NAT9 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in increased expression of NAT9 mRNA	CTD	PMID:23557933
Nat9	Mouse	silver atom	increases expression	EXP		6480464	Silver results in increased expression of NAT9 mRNA	CTD	PMID:27131904
Nat9	Mouse	silver(0)	increases expression	EXP		6480464	Silver results in increased expression of NAT9 mRNA	CTD	PMID:27131904
Nat9	Mouse	Soman	increases expression	ISO	Nat9 (Rattus norvegicus)	6480464	Soman results in increased expression of NAT9 mRNA	CTD	PMID:19281266
Nat9	Mouse	thioacetamide	decreases expression	ISO	Nat9 (Rattus norvegicus)	6480464	Thioacetamide results in decreased expression of NAT9 mRNA	CTD	PMID:34492290
Nat9	Mouse	triphenyl phosphate	affects expression	ISO	NAT9 (Homo sapiens)	6480464	triphenyl phosphate affects the expression of NAT9 mRNA	CTD	PMID:37042841
Nat9	Mouse	triptonide	decreases expression	EXP		6480464	triptonide results in decreased expression of NAT9 mRNA	CTD	PMID:33045310

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Nat9	Mouse	protein-containing complex	part_of	IEA	UniProtKB:Q9BTE0 and ensembl:ENSP00000350467	2290270		Ensembl	GO_REF:0000107
Nat9	Mouse	protein-containing complex	part_of	ISO	UniProtKB:Q9BTE0	2290270		GO_Central	GO_REF:0000119

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Nat9	Mouse	protein binding	enables	ISO	UniProtKB:O43324	9068941	PMID:21516116 and PMID:25416956	IntAct	PMID:21516116 and PMID:25416956
Nat9	Mouse	tubulin N-terminal-methionine acetyltransferase activity	enables	IEA	RHEA:69607	2290270		RHEA	GO_REF:0000116

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:15782199	PMID:16141072	PMID:16141073	PMID:21267068	PMID:21873635	PMID:32325033	PMID:37142655

Nat9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	115,073,655 - 115,078,682 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	115,073,658 - 115,078,685 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	115,182,829 - 115,187,856 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	115,182,832 - 115,187,859 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	115,044,146 - 115,048,630 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	114,998,922 - 115,003,406 (-)	NCBI		MGSCv36	mm8
Celera	11	126,948,071 - 126,952,549 (-)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	80.68	NCBI

NAT9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	74,770,529 - 74,776,345 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	74,770,529 - 74,776,367 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	72,766,668 - 72,772,484 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	70,278,281 - 70,284,065 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	69,359,866 - 69,365,650 (-)	NCBI		Celera
Cytogenetic Map	17	q25.1	NCBI
HuRef	17	68,177,053 - 68,182,842 (-)	NCBI		HuRef
CHM1_1	17	72,831,526 - 72,837,311 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	75,662,404 - 75,668,235 (-)	NCBI		T2T-CHM13v2.0

Nat9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	100,921,306 - 100,926,646 (-)	NCBI		GRCr8
mRatBN7.2	10	100,422,326 - 100,427,510 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	100,422,331 - 100,427,611 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	105,482,221 - 105,487,207 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	104,945,288 - 104,950,275 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	100,343,318 - 100,348,105 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	103,730,215 - 103,737,052 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	103,732,187 - 103,736,973 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	104,566,346 - 104,571,588 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	105,256,791 - 105,261,562 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	105,271,294 - 105,278,101 (-)	NCBI
Celera	10	98,997,941 - 99,003,406 (-)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

Nat9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955553	1,658,932 - 1,664,382 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955553	1,658,932 - 1,664,342 (-)	NCBI	ChiLan1.0	ChiLan1.0

NAT9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	90,808,098 - 90,813,984 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	95,630,792 - 95,636,878 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	68,716,349 - 68,722,509 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	74,272,426 - 74,277,763 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	74,272,426 - 74,277,763 (-)	Ensembl	panpan1.1		panPan2

NAT9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	5,655,178 - 5,660,068 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	5,655,125 - 5,660,046 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	6,334,307 - 6,340,924 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	6,326,834 - 6,333,456 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	6,326,487 - 6,333,230 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	6,363,719 - 6,370,334 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	6,474,357 - 6,480,974 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	6,534,676 - 6,541,303 (+)	NCBI		UU_Cfam_GSD_1.0

Nat9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	6,269,281 - 6,273,352 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936594	138,224 - 142,730 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936594	138,607 - 142,677 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NAT9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	6,459,710 - 6,464,234 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	6,459,673 - 6,464,236 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	6,448,636 - 6,453,206 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NAT9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	46,882,539 - 46,888,232 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	46,883,234 - 46,887,452 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	17,668,128 - 17,674,612 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nat9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	4,632,120 - 4,640,494 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624801	4,632,361 - 4,640,454 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Nat9
181 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	1816
Count of miRNA genes:	505
Interacting mature miRNAs:	616
Transcripts:	ENSMUST00000103038, ENSMUST00000103039, ENSMUST00000103040, ENSMUST00000103041, ENSMUST00000127419, ENSMUST00000134399, ENSMUST00000134769, ENSMUST00000137843, ENSMUST00000153796
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1302034	Pkccl_m	protein kinase C content in lungs (mouse)			Not determined		11	91604608	121973369	Mouse
39128214	Lwq20_m	liver weight QTL 20 (mouse)					11	12268637	118022724	Mouse
1301072	Eae22_m	experimental allergic encephalomyelitis 22 (mouse)			Not determined		11	82377698	116377820	Mouse
1300944	Alcp20_m	alcohol preference locus 20 (mouse)			Not determined		11	95403965	121973369	Mouse
1301012	Vispl_m	visual placing (mouse)			Not determined		11	101022590	121973369	Mouse
4141939	Pregq2_m	pregnancy QTL 2 (mouse)			Not determined		11	94063779	118022724	Mouse
1301983	Berr2_m	berghei resistance locus 2 (mouse)			Not determined		11	98352609	121973369	Mouse
1300766	Skull16_m	skull morphology 16 (mouse)			Not determined		11	81574481	115574636	Mouse
10043976	Obq33_m	obesity QTL 33 (mouse)			Not determined		11	98500469	121973369	Mouse
1301057	Nidd4_m	non-insulin-dependent diabetes mellitus 4 (mouse)			Not determined		11	96810136	121973369	Mouse
1301958	Alcp18_m	alcohol preference locus 18 (mouse)			Not determined		11	95403965	121973369	Mouse
14747003	Mancz9_m	mandible centroid size 9 (mouse)					11	85844911	119844911	Mouse
10412288	Carg4_m	Candida albicans resistance gene 4 (mouse)			Not determined		11	81810267	115810267	Mouse
11251723	Ewc5_m	ethanol withdrawal and consumption 5 (mouse)					11	89869251	121973369	Mouse
15014785	Mvlq1_m	macrovesicular liver lesion QTL 1 (mouse)					11	86608320	120608320	Mouse
4141465	Dbm2_m	diabetes modifier 2 (mouse)			Not determined			94437183	118022724	Mouse
15039374	Adip29_m	adiposity 29 (mouse)					11	86608320	120608320	Mouse
1300962	Cd8mts4_m	CD8 memory T cell subset 4 (mouse)			Not determined		11	96137674	121973369	Mouse
1301095	El6_m	epilepsy 6 (mouse)			Not determined		11	93229183	121973369	Mouse
27226731	Tibmd4_m	tibia midshaft diameter 4, 10 week (mouse)					11	94190826	118890826	Mouse
11341721	Rvfs2_m	Rift Valley fever susceptibility 2 (mouse)					11	100254186	120887165	Mouse
15039376	Bw42_m	body weight QTL 42 (mouse)					11	86608320	120608320	Mouse
1558753	Ath19_m	atherosclerosis 19 (mouse)			Not determined		11	91604608	121973369	Mouse
10044001	Alcw8_m	alcohol withdrawal 8 (mouse)			Not determined		11	99254187	121973369	Mouse
1300649	Crhq1_m	compensatory renal hypertrophy QTL 1 (mouse)			Not determined		11	81574481	115574636	Mouse
27226789	Feml16_m	femur length 16, 10 week (mouse)					11	87490826	121873369	Mouse
11553867	Stmm5_m	skin tumor modifier of MSM 5 (mouse)					11	100058103	121973369	Mouse
10044007	Hbnr14_m	Heligmosomoides bakeri nematode resistance 14 (mouse)			Not determined		11	87502600	121502698	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NM_001362889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001362890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001362891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001362892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_025400	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036156891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AK003948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK009262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK020083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK082469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK148048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK154593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK186542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK213540	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK215096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL606487	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC011315	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CX208013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000103038 ⟹ ENSMUSP00000099327

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,073,658 - 115,078,158 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,182,832 - 115,187,332 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000103039 ⟹ ENSMUSP00000099328

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,073,658 - 115,078,181 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,182,832 - 115,187,355 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000103040 ⟹ ENSMUSP00000099329

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,073,658 - 115,078,216 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,182,832 - 115,187,390 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000103041 ⟹ ENSMUSP00000099330

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,073,658 - 115,078,670 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,182,832 - 115,187,844 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000127419

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,075,621 - 115,078,685 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,184,795 - 115,187,859 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000134399

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,075,620 - 115,078,668 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,184,794 - 115,187,842 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000134769

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,075,804 - 115,078,102 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,184,978 - 115,187,276 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000137843

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,075,430 - 115,077,907 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,184,604 - 115,187,081 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000153796

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	11	115,075,326 - 115,078,088 (-)	Ensembl
GRCm38.p6 Ensembl	11	115,184,500 - 115,187,262 (-)	Ensembl

RefSeq Acc Id:

NM_001362889 ⟹ NP_001349818

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	115,073,655 - 115,078,682 (-)	NCBI
GRCm38	11	115,182,829 - 115,187,856 (-)	NCBI

Sequence:

show sequence

GCTTCTCCGCCCACAGCGGGAGTCAGCTTTTCCAAGGCAGCTACAATGAAGCTGAATCAGAACACCATGCTAGTGGGCAAGAAGGTGGTCCTGGTACCCTACACCTCCGAGCATGTGCCCAGATACCA
CGAGTGGATGAAGTCAGAAGAACTGCGGCATCTGACAGCCTCAGAGCAGCTGACCCTACAGCAGGAGTATGAGATGCAGTGTAGCTGGTGTGAAGATGAAGACAAGTGCACCTTCATTGTGCTGGATG
CAGAGAAATGGCAGGCCCAGCCTCGGCCCCCTGAAGAGAGCTGCATGGTGGGAGATGTGAACCTCTTCCTCACAGACCTTGAAGACCCCACCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCTAGC
TACAGGCGGCAGGGACTTGGCACTGAGGCGTCTCTCCTGATCATGTCCTACGGTGTGACGAAGTTAGGTCTGACCAAGTTTGAGGCCAAAATCGGGCAAGAAAATGAACCTAGCATCCGGATGTTCCA
GAAACTTCACTTTAAGCAGGTGGCTATGAGCAACGTCTTCCAGGAGGTGACACTCAGGCTGGCAGTGAGCGAGCCAGAGCGGAAGTGGATTCTAGAGCAGACGAGCCACATGGAAGAGAGACCCTACA
GGACCAGGAAGGCCGAGCCTGTGACAGCCACCCTGAGCGAGCAGAAGAGTTGGAACTGCCCACTCCCAAGGCCAGACGGCTGCATGGGAGACACAAGTGCAGTCTCTTCAGTCTGCGCCAGGCTCTCC
TGAGCCAGCCATGGCCTCCCCTGGTTAGCAGTGGTCAAGAACACTCGCCAACTCCGAGCCACACACTGACCCTGACTGCACAGGAAGGGGTGGCTGGAGCCCATCAAAAGTCAGGGTGGAGGTGGGGA
CTGGAACGGATGGATGTGGAGAGCCAGCCTTCCCTGGGGCCCTGGCTGAGTAAAGCACTCGTTTGGGCAGCT

hide sequence

RefSeq Acc Id:

NM_001362890 ⟹ NP_001349819

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	115,073,655 - 115,078,225 (-)	NCBI
GRCm38	11	115,182,829 - 115,187,399 (-)	NCBI

Sequence:

show sequence

GCTGCCGTCTGCCTGGCGGAAGCGGACAGCAAGCCCCTCTACGCGCATGCGGAAAGCCTGTTTCTCCGGGACAGACGCTGACGCCTGTCGTTGGGGACGCCTTCCTCGGCAGGGGGTGGTTGTGAGCT
TTGCAGTTTGCAAACTACAGCGCTTAGACGGCCGAGGAACCACGCAAAGGGCTGAGGCCTGAGAACTTTGAGTGGGGCTTGGGGACAGGAAAACGGAAGGGCCAGAGCCGAGTGACGTGGACTCTGGA
CGCTGGAGGCTAGGGTTGGAAACAGGCAGCTACAATGAAGCTGAATCAGAACACCATGCTAGTGGGCAAGAAGGTGGTCCTGGTACCCTACACCTCCGAGCATGTGCCCAGATACCACGAGTGGATGA
AGTCAGAAGAACTGCGGCATCTGACAGCCTCAGAGCAGCTGACCCTACAGCAGGAGTATGAGATGCAGTGTAGCTGGTGTGAAGATGAAGACAAGTGCACCTTCATTGTGCTGGATGCAGAGAAATGG
CAGGCCCAGCCTCGGCCCCCTGAAGAGAGCTGCATGGTGGGAGATGTGAACCTCTTCCTCACAGACCTTGAAGACCCCACCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCTAGCTACAGGCGGCA
GGGACTTGGCACTGAGGCGTCTCTCCTGATCATGTCCTACGGTGTGACGAAGTTAGGTCTGACCAAGTTTGAGGCCAAAATCGGGCAAGAAAATGAACCTAGCATCCGGATGTTCCAGAAACTTCACT
TTAAGCAGGTGGCTATGAGCAACGTCTTCCAGGAGGTGACACTCAGGCTGGCAGTGAGCGAGCCAGAGCGGAAGTGGATTCTAGAGCAGACGAGCCACATGGAAGAGAGACCCTACAGGACCAGGAAG
GCCGAGCCTGTGACAGCCACCCTGAGCGAGCAGAAGAGTTGGAACTGCCCACTCCCAAGGCCAGACGGCTGCATGGGAGACACAAGTGCAGTCTCTTCAGTCTGCGCCAGGCTCTCCTGAGCCAGCCA
TGGCCTCCCCTGGTTAGCAGTGGTCAAGAACACTCGCCAACTCCGAGCCACACACTGACCCTGACTGCACAGGAAGGGGTGGCTGGAGCCCATCAAAAGTCAGGGTGGAGGTGGGGACTGGAACGGAT
GGATGTGGAGAGCCAGCCTTCCCTGGGGCCCTGGCTGAGTAAAGCACTCGTTTGGGCAGCT

hide sequence

RefSeq Acc Id:

NM_001362891 ⟹ NP_001349820

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	115,073,655 - 115,078,225 (-)	NCBI
GRCm38	11	115,182,829 - 115,187,399 (-)	NCBI

Sequence:

show sequence

GCTGCCGTCTGCCTGGCGGAAGCGGACAGCAAGCCCCTCTACGCGCATGCGGAAAGCCTGTTTC
TCCGGGACAGACGCTGACGCCTGTCGTTGGGGACGCCTTCCTCGGCAGGGGGTGGTTGTGAGCTTTGCAGTTTGCAAACTACAGCGCTTAGACGGCCGAGGAACCACGCAAAGGGCTGAGGCCTGAGA
ACTTTGAGTGGGGCTTGGGGACAGGAAAACGGAAGGGCCAGAGCCGAGTGACGTGGACTCTGGACGCTGGAGGCTAGGGTTGGAAACAGATACCACGAGTGGATGAAGTCAGAAGAACTGCGGCATCT
GACAGCCTCAGAGCAGCTGACCCTACAGCAGGAGTATGAGATGCAGTGTAGCTGGTGTGAAGATGAAGACAAGTGCACCTTCATTGTGCTGGATGCAGAGAAATGGCAGGCCCAGCCTCGGCCCCCTG
AAGAGAGCTGCATGGTGGGAGATGTGAACCTCTTCCTCACAGACCTTGAAGACCCCACCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCTAGCTACAGGCGGCAGGGACTTGGCACTGAGGCGTCT
CTCCTGATCATGTCCTACGGTGTGACGAAGTTAGGTCTGACCAAGTTTGAGGCCAAAATCGGGCAAGAAAATGAACCTAGCATCCGGATGTTCCAGAAACTTCACTTTAAGCAGGTGGCTATGAGCAA
CGTCTTCCAGGAGGTGACACTCAGGCTGGCAGTGAGCGAGCCAGAGCGGAAGTGGATTCTAGAGCAGACGAGCCACATGGAAGAGAGACCCTACAGGACCAGGAAGGCCGAGCCTGTGACAGCCACCC
TGAGCGAGCAGAAGAGTTGGAACTGCCCACTCCCAAGGCCAGACGGCTGCATGGGAGACACAAGTGCAGTCTCTTCAGTCTGCGCCAGGCTCTCCTGAGCCAGCCATGGCCTCCCCTGGTTAGCAGTG
GTCAAGAACACTCGCCAACTCCGAGCCACACACTGACCCTGACTGCACAGGAAGGGGTGGCTGGAGCCCATCAAAAGTCAGGGTGGAGGTGGGGACTGGAACGGATGGATGTGGAGAGCCAGCCTTCC
CTGGGGCCCTGGCTGAGTAAAGCACTCGTTTGGGCAGCT

hide sequence

RefSeq Acc Id:

NM_001362892 ⟹ NP_001349821

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	115,073,655 - 115,077,660 (-)	NCBI
GRCm38	11	115,182,829 - 115,186,834 (-)	NCBI

Sequence:

show sequence

GCAGCTACAATGAAGCTGAATCAGAACACCATGCTAGTGGGCAAGAAGGTGGTCCTGGTACCCT
ACACCTCCGAGCATGTGCCCAGAGTGCACCTTCATTGTGCTGGATGCAGAGAAATGGCAGGCCCAGCCTCGGCCCCCTGAAGAGAGCTGCATGGTGGGAGATGTGAACCTCTTCCTCACAGACCTTGA
AGACCCCACCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCTAGCTACAGGCGGCAGGGACTTGGCACTGAGGCGTCTCTCCTGATCATGTCCTACGGTGTGACGAAGTTAGGTCTGACCAAGTTTG
AGGCCAAAATCGGGCAAGAAAATGAACCTAGCATCCGGATGTTCCAGAAACTTCACTTTAAGCAGGTGGCTATGAGCAACGTCTTCCAGGAGGTGACACTCAGGCTGGCAGTGAGCGAGCCAGAGCGG
AAGTGGATTCTAGAGCAGACGAGCCACATGGAAGAGAGACCCTACAGGACCAGGAAGGCCGAGCCTGTGACAGCCACCCTGAGCGAGCAGAAGAGTTGGAACTGCCCACTCCCAAGGCCAGACGGCTG
CATGGGAGACACAAGTGCAGTCTCTTCAGTCTGCGCCAGGCTCTCCTGAGCCAGCCATGGCCTCCCCTGGTTAGCAGTGGTCAAGAACACTCGCCAACTCCGAGCCACACACTGACCCTGACTGCACA
GGAAGGGGTGGCTGGAGCCCATCAAAAGTCAGGGTGGAGGTGGGGACTGGAACGGATGGATGTGGAGAGCCAGCCTTCCCTGGGGCCCTGGCTGAGTAAAGCACTCGTTTGGGCAGCT

hide sequence

RefSeq Acc Id:

NM_025400 ⟹ NP_079676

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	115,073,655 - 115,078,225 (-)	NCBI
GRCm38	11	115,182,829 - 115,187,399 (-)	NCBI
MGSCv37	11	115,044,146 - 115,048,630 (-)	RGD
Celera	11	126,948,071 - 126,952,549 (-)	RGD
cM Map	11		ENTREZGENE

Sequence:

show sequence

GCTGCCGTCTGCCTGGCGGAAGCGGACAGCAAGCCCCTCTACGCGCATGCGGAAAGCCTGTTTCTCCGGGACAGACGCTGACGCCTGTCGTTGGGGACGCCTTCCTCGGCAGGGGGTGGTTGTGAGCT
TTGCAGTTTGCAAACTACAGCGCTTAGACGGCCGAGGAACCACGCAAAGGGCTGAGGCCTGAGAACTTTGAGTGGGGCTTGGGGACAGGAAAACGGAAGGGCCAGAGCCGAGTGACGTGGACTCTGGA
CGCTGGAGGCTAGGGTTGGAAACAGTAGGCAGCTACAATGAAGCTGAATCAGAACACCATGCTAGTGGGCAAGAAGGTGGTCCTGGTACCCTACACCTCCGAGCATGTGCCCAGATACCACGAGTGGA
TGAAGTCAGAAGAACTGCGGCATCTGACAGCCTCAGAGCAGCTGACCCTACAGCAGGAGTATGAGATGCAGTGTAGCTGGTGTGAAGATGAAGACAAGTGCACCTTCATTGTGCTGGATGCAGAGAAA
TGGCAGGCCCAGCCTCGGCCCCCTGAAGAGAGCTGCATGGTGGGAGATGTGAACCTCTTCCTCACAGACCTTGAAGACCCCACCTTGGGGGAGATCGAGGTCATGATTGCAGAGCCTAGCTACAGGCG
GCAGGGACTTGGCACTGAGGCGTCTCTCCTGATCATGTCCTACGGTGTGACGAAGTTAGGTCTGACCAAGTTTGAGGCCAAAATCGGGCAAGAAAATGAACCTAGCATCCGGATGTTCCAGAAACTTC
ACTTTAAGCAGGTGGCTATGAGCAACGTCTTCCAGGAGGTGACACTCAGGCTGGCAGTGAGCGAGCCAGAGCGGAAGTGGATTCTAGAGCAGACGAGCCACATGGAAGAGAGACCCTACAGGACCAGG
AAGGCCGAGCCTGTGACAGCCACCCTGAGCGAGCAGAAGAGTTGGAACTGCCCACTCCCAAGGCCAGACGGCTGCATGGGAGACACAAGTGCAGTCTCTTCAGTCTGCGCCAGGCTCTCCTGAGCCAG
CCATGGCCTCCCCTGGTTAGCAGTGGTCAAGAACACTCGCCAACTCCGAGCCACACACTGACCCTGACTGCACAGGAAGGGGTGGCTGGAGCCCATCAAAAGTCAGGGTGGAGGTGGGGACTGGAACG
GATGGATGTGGAGAGCCAGCCTTCCCTGGGGCCCTGGCTGAGTAAAGCACTCGTTTGGGCAGCT

hide sequence

RefSeq Acc Id:

XM_036156891 ⟹ XP_036012784

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	115,073,658 - 115,078,303 (-)	NCBI

Sequence:

show sequence

TCCAAGCGAGCGCGTGGGGAGGGGCGCAGTGCGTTGATTGGATGCCTCGCGGGGGCGGGGCCGG
GATTGGGCTTTGCGGCTGCCGTCTGCCTGGCGGAAGCGGACAGCAAGCCCCTCTACGCGCATGCGGAAAGCCTGTTTCTCCGGGACAGACGCTGACGCCTGTCGTTGGGGACGCCTTCCTCGGCAGGG
GGTGGTTGTGAGCTTTGCAGTTTGCAAACTACAGCGCTTAGACGGCCGAGGAACCACGCAAAGGGCTGAGGCCTGAGAACTTTGAGTGGGGCTTGGGGACAGGAAAACGGAAGGGCCAGAGCCGAGTG
ACGTGGACTCTGGACGCTGGAGGCTAGGGTTGGAAACAGTAGGCAGCTACAATGAAGCTGAATCAGAACACCATGCTAGTGGGCAAGAAGGTGGTCCTGGTACCCTACACCTCCGAGCATGTGCCCAG
AGTGCACCTTCATTGTGCTGGATGCAGAGAAATGGCAGGCCCAGCCTCGGCCCCCTGAAGAGAGCTGCATGGTGGGAGATGTGAACCTCTTCCTCACAGACCTTGAAGACCCCACCTTGGGGGAGATC
GAGGTCATGATTGCAGAGCCTAGCTACAGGCGGCAGGGACTTGGCACTGAGGCGTCTCTCCTGATCATGTCCTACGGTGTGACGAAGTTAGGTCTGACCAAGTTTGAGGCCAAAATCGGGCAAGAAAA
TGAACCTAGCATCCGGATGTTCCAGAAACTTCACTTTAAGCAGGTGGCTATGAGCAACGTCTTCCAGGAGGTGACACTCAGGCTGGCAGTGAGCGAGCCAGAGCGGAAGTGGATTCTAGAGCAGACGA
GCCACATGGAAGAGAGACCCTACAGGACCAGGAAGGCCGAGCCTGTGACAGCCACCCTGAGCGAGCAGAAGAGTTGGAACTGCCCACTCCCAAGGCCAGACGGCTGCATGGGAGACACAAGTGCAGTC
TCTTCAGTCTGCGCCAGGCTCTCCTGAGCCAGCCATGGCCTCCCCTGGTTAGCAGTGGTCAAGAACACTCGCCAACTCCGAGCCACACACTGACCCTGACTGCACAGGAAGGGGTGGCTGGAGCCCAT
CAAAAGTCAGGGTGGAGGTGGGGACTGGAACGGATGGATGTGGAGAGCCAGCCTTCCCTGGGGCCCTGGCTGAGTAAAGCACTCGTTTGGGCA

hide sequence


Protein RefSeqs	NP_001349818	(Get FASTA)	NCBI Sequence Viewer
	NP_001349819	(Get FASTA)	NCBI Sequence Viewer
	NP_001349820	(Get FASTA)	NCBI Sequence Viewer
	NP_001349821	(Get FASTA)	NCBI Sequence Viewer
	NP_079676	(Get FASTA)	NCBI Sequence Viewer
	XP_036012784	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH11315	(Get FASTA)	NCBI Sequence Viewer
	BAB23087	(Get FASTA)	NCBI Sequence Viewer
	BAC25613	(Get FASTA)	NCBI Sequence Viewer
	BAC38501	(Get FASTA)	NCBI Sequence Viewer
	BAE28311	(Get FASTA)	NCBI Sequence Viewer
	EDL34465	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000099327
	ENSMUSP00000099327.2
	ENSMUSP00000099328.2
	ENSMUSP00000099329
	ENSMUSP00000099329.5
	ENSMUSP00000099330
	ENSMUSP00000099330.2
GenBank Protein	Q3UG98	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_079676 ⟸ NM_025400
- Peptide Label:	isoform 1
- UniProtKB:	Q8C1G5 (UniProtKB/Swiss-Prot), Q9D151 (UniProtKB/Swiss-Prot), Q3UG98 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MKLNQNTMLVGKKVVLVPYTSEHVPRYHEWMKSEELRHLTASEQLTLQQEYEMQCSWCEDEDKCTFIVLDAEKWQAQPRPPEESCMVGDVNLFLTDLEDPTLGEIEVMIAEPSYRRQGLGTEASLLIM SYGVTKLGLTKFEAKIGQENEPSIRMFQKLHFKQVAMSNVFQEVTLRLAVSEPERKWILEQTSHMEERPYRTRKAEPVTATLSEQKSWNCPLPRPDGCMGDTSAVSSVCARLS hide sequence

RefSeq Acc Id:	NP_001349818 ⟸ NM_001362889
- Peptide Label:	isoform 1
- UniProtKB:	Q8C1G5 (UniProtKB/Swiss-Prot), Q3UG98 (UniProtKB/Swiss-Prot), Q9D151 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001349820 ⟸ NM_001362891
- Peptide Label:	isoform 2

RefSeq Acc Id:	NP_001349819 ⟸ NM_001362890
- Peptide Label:	isoform 1
- UniProtKB:	Q8C1G5 (UniProtKB/Swiss-Prot), Q3UG98 (UniProtKB/Swiss-Prot), Q9D151 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	NP_001349821 ⟸ NM_001362892
- Peptide Label:	isoform 3

Protein Domains

N-acetyltransferase

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q3UG98-F1-model_v2	AlphaFold	Q3UG98	1-241	view protein structure

RGD ID:

6821398

Promoter ID:

MM_KWN:10506

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, Brain, Liver, MEF_B6, Spleen

Transcripts:

ENSMUST00000068542, ENSMUST00000103038, ENSMUST00000103039, ENSMUST00000103041, OTTMUST00000007867, OTTMUST00000007910, OTTMUST00000007912, OTTMUST00000007913, OTTMUST00000007914, OTTMUST00000007915

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	11	115,048,591 - 115,049,522 (-)	MPROMDB

RGD ID:

8677314

Promoter ID:

EPDNEW_M16688

Type:

initiation region

Name:

Nat9_1

Description:

Mus musculus N-acetyltransferase 9 (GCN5-related, putative) ,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	11	115,187,353 - 115,187,413	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000015542	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000103038	ENTREZGENE
	ENSMUST00000103038.8	UniProtKB/Swiss-Prot
	ENSMUST00000103039.2	UniProtKB/Swiss-Prot
	ENSMUST00000103040	ENTREZGENE
	ENSMUST00000103040.11	UniProtKB/Swiss-Prot
	ENSMUST00000103041	ENTREZGENE
	ENSMUST00000103041.8	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.630.30	UniProtKB/Swiss-Prot
InterPro	Acyl_CoA_acyltransferase	UniProtKB/Swiss-Prot
	GNAT_dom	UniProtKB/Swiss-Prot
	NAT9-like	UniProtKB/Swiss-Prot
KEGG Report	mmu:66176	UniProtKB/Swiss-Prot
MGD	MGI:1913426	ENTREZGENE
NCBI Gene	66176	ENTREZGENE
PANTHER	N-ACETYLTRANSFERASE 9	UniProtKB/Swiss-Prot
	PTHR13256	UniProtKB/Swiss-Prot
Pfam	Acetyltransf_3	UniProtKB/Swiss-Prot
PhenoGen	Nat9	PhenoGen
Superfamily-SCOP	SSF55729	UniProtKB/Swiss-Prot
UniProt	NAT9_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
	Q8C1G5	ENTREZGENE
	Q9D151	ENTREZGENE
UniProt Secondary	Q8C1G5	UniProtKB/Swiss-Prot
	Q9D151	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-07-27	Nat9	N-acetyltransferase 9 (GCN5-related, putative)	Nat9	NAT9	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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