RERE (Sus scrofa - pig) |
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RERE (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 8,352,404 - 8,817,640 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 8,352,397 - 8,848,921 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 8,412,464 - 8,877,699 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 8,335,051 - 8,800,286 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 8,346,722 - 8,811,790 | NCBI | | | | | Celera | 1 | 7,520,570 - 7,986,441 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p36.23 | NCBI | | | | | HuRef | 1 | 7,561,179 - 8,026,761 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 8,401,786 - 8,867,545 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 7,885,246 - 8,351,098 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Rere (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 150,365,372 - 150,706,423 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 150,366,103 - 150,706,423 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 150,281,511 - 150,621,966 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 150,281,646 - 150,621,966 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 149,656,025 - 149,996,075 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 149,250,140 - 149,465,771 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 152,556,963 - 152,899,017 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | E2 | NCBI | | | | | cM Map | 4 | 81.34 | NCBI | | | | |
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Rere (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 166,048,770 - 166,380,559 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 160,765,855 - 161,097,678 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 160,765,934 - 161,097,677 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 163,482,407 - 163,814,337 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 165,303,892 - 165,633,496 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 165,260,957 - 165,592,979 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 167,330,966 - 167,664,506 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 167,331,035 - 167,664,505 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 170,960,573 - 171,292,513 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 167,440,122 - 167,777,271 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 167,450,315 - 167,785,644 (+) | NCBI | | | | | Celera | 5 | 159,022,463 - 159,353,516 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
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Rere (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955486 | 4,443,723 - 4,695,800 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955486 | 4,303,573 - 4,695,800 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RERE (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 219,411,252 - 219,877,538 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 218,057,183 - 218,522,302 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 7,111,594 - 7,576,667 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 8,348,687 - 8,747,495 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 8,351,367 - 8,648,973 (-) | Ensembl | panpan1.1 | | panPan2 | |
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RERE (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 61,868,288 - 62,249,009 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 61,868,685 - 62,215,973 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 61,877,331 - 62,286,365 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 62,085,105 - 62,495,227 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 62,087,296 - 62,495,288 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 62,084,029 - 62,493,986 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 61,948,407 - 62,357,291 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 62,352,661 - 62,762,441 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Rere (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405058 | 32,193,393 - 32,496,551 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936623 | 2,678,638 - 2,942,216 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936623 | 2,678,627 - 2,942,387 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RERE (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 20 | 122,946,759 - 123,408,428 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 123,109,364 - 123,408,631 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666054 | 26,963,344 - 27,436,567 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rere (Heterocephalus glaber - naked mole-rat) |
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