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Gene: EFHB (EF-hand domain family member B) Sus scrofa

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Symbol:

EFHB

Name:

EF-hand domain family member B

RGD ID:

14227311

Description:

ENCODES a protein that exhibits calcium ion binding (inferred); calcium ion sensor activity (inferred); metal ion binding (inferred); INVOLVED IN flagellated sperm motility (inferred); regulation of calcineurin-NFAT signaling cascade (inferred); regulation of store-operated calcium entry (inferred); ASSOCIATED WITH 3p deletion syndrome (ortholog); FOUND IN axonemal A tubule inner sheath (inferred); axonemal microtubule (inferred); cell projection (inferred); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

EF-hand domain-containing family member B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	6,824,503 - 6,898,764 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	6,826,023 - 6,898,763 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	7,728,118 - 7,798,299 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EFHB	Pig	3p deletion syndrome		ISO	RGD:1349676	8554872	ClinVar Annotator: match by term: 3p- syndrome	ClinVar	PMID:31690835

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EFHB	Pig	deoxynivalenol	decreases expression	EXP		6480464	deoxynivalenol results in decreased expression of EFHB mRNA	CTD	PMID:35307453

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EFHB	Pig	flagellated sperm motility	involved_in	IEA	UniProtKB:Q8CDU5\|ensembl:ENSMUSP00000024725	150520179		Ensembl	GO_REF:0000107
EFHB	Pig	regulation of calcineurin-NFAT signaling cascade	involved_in	IEA	UniProtKB:Q8N7U6\|ensembl:ENSP00000295824	150520179		Ensembl	GO_REF:0000107
EFHB	Pig	regulation of store-operated calcium entry	involved_in	IEA	UniProtKB:Q8N7U6\|ensembl:ENSP00000295824	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EFHB	Pig	axonemal A tubule inner sheath	is_active_in	IEA	UniProtKB:Q8CDU5\|ensembl:ENSMUSP00000024725	150520179		Ensembl	GO_REF:0000107
EFHB	Pig	axonemal microtubule	located_in	IEA	ARBA:ARBA00044867	150520179		UniProt	GO_REF:0000117
EFHB	Pig	axonemal microtubule	located_in	IEA	UniProtKB:Q8N7U6\|ensembl:ENSP00000295824	150520179		Ensembl	GO_REF:0000107
EFHB	Pig	cell projection	located_in	IEA	UniProtKB-KW:KW-0966	150520179		UniProt	GO_REF:0000043
EFHB	Pig	cilium	located_in	IEA	UniProtKB-KW:KW-0969	150520179		UniProt	GO_REF:0000043
EFHB	Pig	cytoskeleton	located_in	IEA	UniProtKB-KW:KW-0206	150520179		UniProt	GO_REF:0000043
EFHB	Pig	motile cilium	located_in	IEA	UniProtKB-KW:KW-0282	150520179		UniProt	GO_REF:0000043
EFHB	Pig	sperm flagellum	is_active_in	IEA	UniProtKB:Q8CDU5\|ensembl:ENSMUSP00000024725	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EFHB	Pig	calcium ion binding	enables	IEA	InterPro:IPR002048	150520179		InterPro	GO_REF:0000002
EFHB	Pig	calcium ion sensor activity	enables	IEA	UniProtKB:Q8N7U6\|ensembl:ENSP00000295824	150520179		Ensembl	GO_REF:0000107
EFHB	Pig	metal ion binding	enables	IEA	UniProtKB-KW:KW-0479	150520179		UniProt	GO_REF:0000043
EFHB	Pig	protein binding	enables	ISO	UniProtKB:Q13586,UniProtKB:Q96D31	9068941	PMID:30481768	UniProt	PMID:30481768
EFHB	Pig	protein binding	enables	ISO	UniProtKB:Q13586\|UniProtKB:Q96D31	9068941	PMID:30481768	IntAct	PMID:30481768

PMID:14681463	PMID:17145712	PMID:22301074

EFHB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	6,824,503 - 6,898,764 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	6,826,023 - 6,898,763 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	7,728,118 - 7,798,299 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EFHB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	19,879,472 - 19,946,983 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	19,879,472 - 19,947,025 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	19,920,964 - 19,988,475 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	19,895,968 - 19,950,710 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	19,895,971 - 19,950,676	NCBI
Celera	3	19,861,484 - 19,916,233 (-)	NCBI		Celera
Cytogenetic Map	3	p24.3	NCBI
HuRef	3	19,861,347 - 19,916,080 (-)	NCBI		HuRef
CHM1_1	3	19,873,136 - 19,927,880 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	19,883,550 - 19,951,207 (-)	NCBI		T2T-CHM13v2.0

Efhb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	53,705,077 - 53,770,362 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	53,705,917 - 53,770,349 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	53,398,044 - 53,463,334 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	53,398,889 - 53,463,321 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	53,538,214 - 53,602,646 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	52,863,818 - 52,928,250 (-)	NCBI		MGSCv36	mm8
Celera	17	56,844,691 - 56,909,168 (-)	NCBI		Celera
Cytogenetic Map	17	C	NCBI
cM Map	17	27.78	NCBI

Efhb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	6,608,791 - 6,680,104 (-)	NCBI		GRCr8
mRatBN7.2	9	6,372,191 - 6,441,678 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	6,372,194 - 6,441,919 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	7,524,938 - 7,587,963 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	12,682,486 - 12,745,498 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	11,846,203 - 11,909,734 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	47,988 - 120,800 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	47,724 - 120,799 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	42,285 - 114,389 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	1,563,384 - 1,635,269	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Cytogenetic Map	9	q11	NCBI

Efhb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955430	11,932,296 - 11,987,845 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955430	11,932,753 - 11,986,985 (-)	NCBI	ChiLan1.0	ChiLan1.0

EFHB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	19,840,935 - 19,903,938 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	19,845,702 - 19,908,709 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	19,798,204 - 19,855,338 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	20,130,063 - 20,184,718 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	20,128,668 - 20,184,718 (-)	Ensembl	panpan1.1		panPan2

EFHB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	23,337,293 - 23,384,362 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	23,335,956 - 23,384,193 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	23,362,527 - 23,410,153 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	23,824,176 - 23,871,987 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	23,822,838 - 23,871,409 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	23,536,377 - 23,583,894 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	23,601,798 - 23,649,332 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	23,847,939 - 23,895,522 (+)	NCBI		UU_Cfam_GSD_1.0

Efhb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	179,041,162 - 179,093,637 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936473	12,179,950 - 12,232,093 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EFHB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	64,608,440 - 64,679,276 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	64,608,604 - 64,661,298 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	37,634,448 - 37,700,575 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Efhb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624821	5,216,624 - 5,269,433 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624821	5,215,680 - 5,269,500 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in EFHB
3406 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
1	22	3	2	1	2	3	22	4	2


RefSeq Transcripts	XM_003132069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK348426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU915344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01127008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000012271 ⟹ ENSSSCP00000011954

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	13	6,824,503 - 6,898,764 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000106278 ⟹ ENSSSCP00000080673

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	13	6,824,503 - 6,898,565 (-)	Ensembl

RefSeq Acc Id:

XM_003132069 ⟹ XP_003132117

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	13	6,826,023 - 6,898,763 (-)	NCBI

Sequence:

show sequence

ACTCCGTTAAGTGTTAAGCAGCAGGCAGGAAGCAGTGGGCAGGGAGTCCAAATGGAGATGTGCTCTTTCGTGAGAGTGCCATCTCCCAAAGTGTTGGGGTCCTCCAAAGCATTAGGATCTTCCCTCCA
GCCGGGTACAGCTTACCCCTTAGAGATGAGTGCCCTTGGGAAAGTGAGGGTGTCTGAGAGGAAATCTCCCCTGGGCATGGCGGTGGGATTCGTCCAGGAAGGAAAGGGTGGCTTAGGAGAGAGAAGAG
TCTTCATGGGAACAACATCTCCTACGGAGTTAGGGCTCAGAGTGAGATTAGGAAAAGAAGATTCCTCATGCACTAATAAATATGAGGAGAGGATAGCATCATCAGAAACAAAATCTCCATCAAGCAAA
GGGCTTGAAATGAGATTAAAAAGACCAGATATTTCTAGGACCTTCATGGATGGGAGTAATTTAGGAGTCAACAGGGTCTCAGCCCTACAGGAGACAAAACCTTCTCTGAGTATGTTGCCAGGAAGGGT
GGGTTTAGAAAATGAGCGTTTTTTGGCAGGGTGTTGTCCTGGGAGGGTAAAACGGCCTCCACTGGGCATGGTGTGTAAAAGTCCACAGGCTGTAGGGAGCAGGAGATGTCCTGTGGCTGGTGACCTTG
AAGGATTAGGGGCTTCAATGGGGAAGCAACTTGTTTTGGATATGGAACCTAGACAGGAACTGGAAAAAGAGTCCACCTGTGTGGTGATGAAGCCCAAAGCAGAGATGGAGCCTCCTGTGGAGGTGGAC
ATGGGGCTACCCCAACCAGAGGATCCAGATGAAACTAATCCCACAGATCTTCATATGGGCTTGGTGATAGAACCATCTGAGTGCCAGCTGGCTCAACTACATGAAGAGCAGAAGGTGGCTGAGAACAC
TGAACTGGGAGTAGAACCTCCAGATCACATCAGACCCATATACTCCGGGAAGTTTTTTGATCGGACGCCTTGCTGGCCAAGTGCAGGGAAAGTTCTTCCAATTGGATACAGAGTTGCAACATGCTTGA
CTGAAAAACTTCCCAGGCTAATGACCCCACCTGAGGCAAAAAAATTTTTCAACTTCAGATATCCACCTGCTGGAGCCGAAAGAGTATTTTATGGCAGAGCAAACGACCCCCAAATCGCACCGTATTTG
ACACATGGGATAAGATCTAAAATTTCAATACCGGCAAAGGTATTGATAAACCCACAGCCTATTACAACATTTCAACAGAAAATCAAAGATAAAAAGGAATCAGTATATTTTAGCAATCAACGGGCACC
CTTAGGAAAATCTCATGATCAGACGCCAGGATTACCTAAAGGCTTGGATGTACCTAATACGACATTTGGGACAGCCATCATCAGAGAATTATCCCTTGGAGATGTGGTGAACCCACCAAAACCCTACG
AAGAAGTATTTGAAGAAGGACAGGCAGGGCATGATCTGTATGTTGTTTCTCACAATGATTATTTTGTGGGAGAAGCAAAGAACCGAAAGTATAACCCATCAAGTTTCCATAGGTTTAACTTGTATGGA
GTCCCAACACCCCATACAAATGATGGACGAAACATGGCAAAAACTTTACATTGGCTTCATGAACTACAAATGAAAAGAGGAGCAAAGATTGAATCCAAGAGAGCTGATGATTTCAAAGAAAAATTTCA
ACATAAACTTGGAAGAGTCCTAGATCCCATTGCAGAAACGATGACTGTTCCCCCCGACCACACATTTGGGGCTTGTCTCCGTCCTGACGAGTATGGAGCTGGTGATCTCATTCACAGAAGACTTCCAG
GCGAGTATCTCCGAGGCAAGGACAGAGAGCGAGCCCTCATTGCAGCCACGCGGCATCACTTGAAGAAAGTTAACTACCAAAACTTTGACACTTTGCTGGCAGCCTTCAGGCACTACGATAAGAAGGGA
GATGGGGCGATAGATAAAGCCGAGCTTCAGGAAGCTTGTAACCAGGCCAGCCTGCACTTGGATGAGAAGCTCCTGGACCAGCTATTTGAATACTGTGATGTGGATAATGATGGGCTGATTAACTACCT
AGAATTTGCAAATTTTCTTAACTGGAAAGATAAAACCCCCCTTAAAGGGTATGAAGAAAGGATCATTATTAAAGGCAGAAAACCAGATTGTGCAAACCCTGTTGAGACTAACGCAGAAGAATCTGAAC
CAGCTTTCCTGATAAAGCCCGAAGATATCATCTTAAAAGAACCCGGGAGCTCAGAAAAGACTCTTCGGACACTTCTGAGGCCAAGTGATAAAGTTTCTAATTACTACAAGACAACTTCTTCGGAAATC
GGTGCAGATGTAGGTGCTGTGCTTTCTACTTGTCATCCGATCTTTGGTGTTCCAACCATTCGTTCCGATATTCCTGCCCCTCGAATTCGGCGCATCAGCGACAGAACTAACTACGGCGAAGATGGAAA
TGCCTATTCATTGCTATATCCTACCATCTTTGGCCAGAAAGGAGTGTTTGAAAGAGACTTCTTCAAGACCAGATCAAAAAAGGAGATTGCAGAGATATTATGCAACATCGGTGTCAACCTTTCTGAAG
ATGAATTTGAAAATGTGTGGAATCTTGCGTCAAAAAAACATCACAGAGGAGAAGTTTGTGTTGAGAACATCAGGAATGTTCTGGATGAGCTACAGCATGCAGAGCGGACCAAGTGCAAAACAGCCGTG
TGATCTTTTTGGAGTTCATTCATTTAAACCAAAGGATTGTTAAATATGTGTTCCTCTAAAATGTTCAGTCTGTTCTGGTTTTAGATATTACATTATATTCAGGAATCACTGTGGGAGGGCTCATATGC
CTGGATTCAATGCTAATAAATTAGATTTTGGATTTTAAAATTTATTTTATCCTTTCCTATAATGCACCAGAGAACTTGACAAACACTCGGAGTTAATCTTTAACCTCACCAAAGGCTTTGTTCAGGAT
GATATTGGAAGTTTGTAATGTGTAGTATGCTTAAGAATTCTATGCTTCAGTTGGTTGCCTGGAATTCAAAGTCCAATTCATGATACCAGGTTCACAAAATTTTTCCCTCAACATTTAAAATTTTTTCT
CTGGAGGTATCACTATGACACAACTTCAGCTTGATGAGCATCAGAGGAGAAGAGACTTGATCACAAGAAGCAGAATTTAGGAATCAACAACTTGAGTTCCAACAACAACACCATGGCACACACATGTT
ATTTCGAAATACTTTGGTATGTGTTTTCTGAAAACAAGCACTTTCTACTACCCAATCGTAGTACAATTTTCAAAACCAGGAGATTATTATTACTATGGCATTATTATCCAATTTACAGGCTTTATTCA
AATTTCTCCAATAATCTTTTATACTGAAAATTTTTTTTCTTTTTCTTTTTTTTAAAGTATAGTTGATTTACATGT

hide sequence


Protein RefSeqs	XP_003132117	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000011954
	ENSSSCP00000011954.4
	ENSSSCP00000080673.1
	ENSSSCP00045018037.1
	ENSSSCP00060032911.1

RefSeq Acc Id:

XP_003132117 ⟸ XM_003132069

- UniProtKB:

A0A8D1W322 (UniProtKB/TrEMBL), F1RS61 (UniProtKB/TrEMBL), A0A8D1HL79 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEMCSFVRVPSPKVLGSSKALGSSLQPGTAYPLEMSALGKVRVSERKSPLGMAVGFVQEGKGGLGERRVFMGTTSPTELGLRVRLGKEDSSCTNKYEERIASSETKSPSSKGLEMRLKRPDISRTFMD
GSNLGVNRVSALQETKPSLSMLPGRVGLENERFLAGCCPGRVKRPPLGMVCKSPQAVGSRRCPVAGDLEGLGASMGKQLVLDMEPRQELEKESTCVVMKPKAEMEPPVEVDMGLPQPEDPDETNPTDL
HMGLVIEPSECQLAQLHEEQKVAENTELGVEPPDHIRPIYSGKFFDRTPCWPSAGKVLPIGYRVATCLTEKLPRLMTPPEAKKFFNFRYPPAGAERVFYGRANDPQIAPYLTHGIRSKISIPAKVLIN
PQPITTFQQKIKDKKESVYFSNQRAPLGKSHDQTPGLPKGLDVPNTTFGTAIIRELSLGDVVNPPKPYEEVFEEGQAGHDLYVVSHNDYFVGEAKNRKYNPSSFHRFNLYGVPTPHTNDGRNMAKTLH
WLHELQMKRGAKIESKRADDFKEKFQHKLGRVLDPIAETMTVPPDHTFGACLRPDEYGAGDLIHRRLPGEYLRGKDRERALIAATRHHLKKVNYQNFDTLLAAFRHYDKKGDGAIDKAELQEACNQAS
LHLDEKLLDQLFEYCDVDNDGLINYLEFANFLNWKDKTPLKGYEERIIIKGRKPDCANPVETNAEESEPAFLIKPEDIILKEPGSSEKTLRTLLRPSDKVSNYYKTTSSEIGADVGAVLSTCHPIFGV
PTIRSDIPAPRIRRISDRTNYGEDGNAYSLLYPTIFGQKGVFERDFFKTRSKKEIAEILCNIGVNLSEDEFENVWNLASKKHHRGEVCVENIRNVLDELQHAERTKCKTAV

hide sequence

Ensembl Acc Id:

ENSSSCP00000011954 ⟸ ENSSSCT00000012271

Ensembl Acc Id:

ENSSSCP00000080673 ⟸ ENSSSCT00000106278

Protein Domains

EF-hand

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000011205	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00045015419	UniProtKB/TrEMBL
	ENSSSCG00060055861	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000012271	ENTREZGENE
	ENSSSCT00000012271.4	UniProtKB/TrEMBL
	ENSSSCT00000106278.1	UniProtKB/TrEMBL
	ENSSSCT00045026125.1	UniProtKB/TrEMBL
	ENSSSCT00060076120.1	UniProtKB/TrEMBL
Gene3D-CATH	EF-hand	UniProtKB/TrEMBL
InterPro	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF_Hand_1_Ca_BS	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
	EFHC1/EFHC2/EFHB	UniProtKB/TrEMBL
KEGG Report	ssc:100519922	UniProtKB/TrEMBL
NCBI Gene	EFHB	ENTREZGENE
PANTHER	EF-HAND DOMAIN-CONTAINING FAMILY MEMBER B	UniProtKB/TrEMBL
	PTHR12086	UniProtKB/TrEMBL
Pfam	EF-hand_7	UniProtKB/TrEMBL
PROSITE	EF_HAND_1	UniProtKB/TrEMBL
	EF_HAND_2	UniProtKB/TrEMBL
SMART	EFh	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
UniProt	A0A8D1HL79	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1W322	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4FMU3_PIG	UniProtKB/TrEMBL
	F1RS61	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:87569	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar