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Gene: PATZ1 (POZ/BTB and AT hook containing zinc finger 1) Sus scrofa

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Symbol:

PATZ1

Name:

POZ/BTB and AT hook containing zinc finger 1

RGD ID:

14222708

Description:

ENCODES a protein that exhibits chromatin binding (inferred); RNA polymerase II cis-regulatory region sequence-specific DNA binding (inferred); ubiquitin protein ligase binding (inferred); INVOLVED IN male gonad development (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH high grade glioma (ortholog); FOUND IN male germ cell nucleus (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

POZ-, AT hook-, and zinc finger-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	48,075,347 - 48,093,931 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	48,075,345 - 48,093,385 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	51,186,332 - 51,194,971 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

high grade glioma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

male gonad development (IEA,ISO)

negative regulation of endothelial cell migration (IEA)

negative regulation of transcription by RNA polymerase II (IBA)

positive regulation of DNA-templated transcription (IEA,ISO)

regulation of cytokine production (IBA)

regulation of DNA-templated transcription (IEA,ISO)

regulation of gene expression (IEA,ISO)

regulation of immune system process (IBA)

spermatogenesis (IEA,ISO)

T cell differentiation (IEA,ISO)

Cellular Component

male germ cell nucleus (IEA)

nucleoplasm (IBA,IEA)

nucleus (IEA)

Molecular Function

chromatin binding (IEA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IBA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA,IEA)

ubiquitin protein ligase binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PATZ1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	48,075,347 - 48,093,931 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	48,075,345 - 48,093,385 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	51,186,332 - 51,194,971 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PATZ1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	31,325,804 - 31,346,346 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	31,325,804 - 31,346,346 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	31,721,790 - 31,742,332 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	30,051,790 - 30,072,249 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	30,046,343 - 30,066,803	NCBI
Celera	22	15,522,280 - 15,542,738 (-)	NCBI		Celera
Cytogenetic Map	22	q12.2	NCBI
HuRef	22	14,683,379 - 14,703,837 (-)	NCBI		HuRef
CHM1_1	22	31,681,580 - 31,702,037 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	31,789,769 - 31,810,306 (-)	NCBI		T2T-CHM13v2.0

Patz1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	3,239,131 - 3,259,083 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	3,238,874 - 3,259,083 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	3,289,131 - 3,309,083 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	3,288,874 - 3,309,083 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	3,190,460 - 3,208,520 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	3,190,460 - 3,208,520 (+)	NCBI		MGSCv36	mm8
Celera	11	3,781,391 - 3,799,451 (+)	NCBI		Celera
Cytogenetic Map	11	A1	NCBI
cM Map	11	2.3	NCBI

Patz1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	82,378,226 - 82,396,679 (+)	NCBI		GRCr8
mRatBN7.2	14	78,154,590 - 78,173,032 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	78,152,516 - 78,173,032 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	82,595,751 - 82,614,012 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	83,835,865 - 83,854,125 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	80,281,599 - 80,299,861 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	83,509,763 - 83,528,898 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	83,510,278 - 83,528,898 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	84,198,755 - 84,217,034 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	83,905,714 - 83,936,768 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	83,915,647 - 83,934,526 (+)	NCBI
Celera	14	77,068,978 - 77,087,236 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Patz1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955455	5,542,659 - 5,565,154 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955455	5,544,841 - 5,566,630 (-)	NCBI	ChiLan1.0	ChiLan1.0

PATZ1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	41,281,520 - 41,301,945 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	43,979,999 - 44,000,659 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	12,349,691 - 12,370,273 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	30,211,812 - 30,232,106 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	30,211,812 - 30,232,106 (-)	Ensembl	panpan1.1		panPan2

PATZ1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	24,277,719 - 24,296,440 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	24,278,802 - 24,296,154 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	24,147,525 - 24,166,353 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	24,660,928 - 24,679,758 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	24,660,945 - 24,679,628 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	24,364,111 - 24,382,938 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	24,626,189 - 24,645,033 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	24,687,638 - 24,706,466 (-)	NCBI		UU_Cfam_GSD_1.0

Patz1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	117,234,125 - 117,254,277 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936755	491,656 - 511,812 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936755	491,660 - 511,812 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PATZ1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	14,217,010 - 14,237,717 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	14,215,918 - 14,237,579 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	111,877,355 - 111,898,728 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Patz1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	7,822,591 - 7,842,403 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624747	7,823,009 - 7,841,997 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PATZ1
173 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021073093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK239972	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK346275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT573044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01028544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000010984 ⟹ ENSSSCP00000010698

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	48,075,345 - 48,094,136 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000049659 ⟹ ENSSSCP00000050343

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	48,088,303 - 48,093,166 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000065454 ⟹ ENSSSCP00000052980

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	48,075,347 - 48,093,931 (-)	Ensembl

RefSeq Acc Id:

XM_021073093 ⟹ XP_020928752

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	48,075,345 - 48,093,385 (-)	NCBI

Sequence:

show sequence

TGGGGGCAGCTATGTGGGAGGTGGTGCGCTCTGCAGTCTAGACAGTCCGATCCGGGCAGGGGGC
GTGTGCGCTCGGCGCACCTGCGAGACTACAGAGCCCGGGGCCGGCACGTGTGGGGAGTGTAGAC
ACGTTCGCTGCGCTCTGCTTCTCGCTGCCTAGGGGAAGGGAGTGGGGCGGGCAAGTGCCGCGGC
CCGGTTTGTGGGGAGGGGGTGGCGGCCATGGAGCGGGTGAACGACGCTTCTTGCGGCCCGTCGG
GCTGCTACACCTACCAGGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCG
CAAAAACGGCGGGCGCTTCTGCGACGTGCTTCTGCGGGTGGGCGATGAGAGCTTCCCAGCGCAC
CGCGCGGTGCTGGCCGCCTGCAGCGAGTACTTTGAGTCGGTGTTCAGTGCCCAGTTGGGCGACG
GCGGAACTGCGGAGGGGGGTCCCGCTGACNGTGGGGGCGCAGCGGCGGCCCCAGGCGGTGGGGC
TGGGGGCAGCCGGGAGCTAGAGATGCACACCATCAGCTCCAAGGTGTTCGGGGACATCCTGGAC
TTCGCCTACACTTCCCGCATTGTGGTTCGCCTGGAGAGCTTCCCCGAGCTTATGACGGCTGCCA
AGTTTCTGCTGATGAGGTCCGTCATTGAGATTTGCCAGGAAGTCATCAAACAGTCCAATGTGCA
GATCCTGGTGCCCCCTGCCCGGGCCGACATCATGCTCTTTCGTCCCCCTGGGACCTCGGACTTA
GGCTTCCCTTTGGACATGACCAATGGAGCAGCCTTGGCAGCCAACAGCAATGGCATCGCAGGCA
GCATGCAGCCCGAGGAGGAGGCGGCTAGGGCAGCTGGTGCAGCCATTGCGAGCCAAGCCTCCCT
GCCTGTGTTACCTGGTGTGGACCGCTTGCCCATGGTGGCTGGACCCTTGTCTCCCCAACTGCTG
ACTTCCCCGTTCCCCAATGTGGCATCCAGTGCCCCTCCCCTGACTGGCAAGCGAGGCCGGGGCC
GCCCAAGGAAGGCCAACCTTCTGGACTCAATGTTCGGGTCCCCAGGGGGCCTGAGGGAAGCAGG
CATCCTTCCCTGTGGCCTGTGTGGGAAGGTGTTCACTGATGCCAATCGGCTCCGGCAGCACGAG
GCCCAGCATGGTGTCACCAGCCTCCAGCTGGGCTACATCGACCTTCCTCCTCCAAGGCTGGGCG
AGAATGGGCTACCCATCTCAGAGGACCCCGACGGCCCCCGAAAGAGGAGCCGGACCAGGAAGCA
GGTGGCCTGTGAGATCTGCGGCAAGATCTTCCGAGACGTGTACCATCTCAATCGGCACAAGCTT
TCCCACTCGGGGGAGAAGCCCTATTCCTGCCCCGTGTGTGGGCTGAGGTTCAAGAGAAAAGATC
GCATGTCCTACCATGTGCGGTCCCACGATGGGTCCGTGGGCAAGCCCTACATCTGCCAGAGCTG
TGGGAAAGGCTTCTCCAGGCCCGATCACTTGAATGGACATATCAAGCAGGTGCACACTTCTGAG
CGGCCTCACAAGTGTCAGACCTGCAATGCTTCTTTTGCCACCCGAGACCGTCTGCGCTCCCACC
TGGCCTGTCATGAAGACAAGGTGCCCTGCCAGGTGTGCGGGAAGTACTTGAGGGCGGCGTACAT
GGCAGACCACCTGAAGAAGCACAGTGAGGGGCCCAGCAACTTCTGCAGCATCTGTAACCGAGGT
TTCTCCTCTGCCTCCTACTTAAAGGTCCATGTTAAAACCCACCACGGTGTTCCCCTTCCCCAGG
TCTCCAGGCACCAGGAGCCCATCCCGAATGGGGGAGCAGCGTTCCACTGCGCCAGGACCTATGG
CAACAAAGAAGGCCAGAAATGCTCACATCAGGATCCGATTGAGAGCTCCGACTCCTACGGCGAC
CTCTCAGATGCCAGCGACCTGAAGACCCCTGAGAAACAGAGCACCAATGGCTCTTTCTGCGACA
TGGCGGTCCCTAAAAACAAGCTGGAGTCCGATGGGGAGAAGAAGTACCCCTGCCCTGAGTGTGG
GAGCTTCTTCCGCTCCAAGTCCTACTTGAACAAACACATCCAGAAGGTGCACGTCCGGGCCCTT
GGGGGCCCCCTGGGGGACCTGGGCCCCACCCTTGGCTCGCCCTTCTCTCCCCAGCAGAACATGT
CTCTCCTTGAGTCCTTTGGGTTTCAGATCGTTCAATCAGCGTTTGCATCATCTCTGGTAGATCC
CGAGGTTGACCAGCAGCCCATGGGGCCTGAGGGCAAGTGAGGCAGAGGCTTCGTCCCCATGGAA
ACGCCACTGGGGACAGCTGAGAAATGCTGTGAATGCGGAGGAAGTGGTGTCTTTGGGTTCTGTA
GCTGAGAGATTTTTATTCGTTTTTAACTCCCCCTCCAGCCCTGTCACCCCTCCCCTCCCCTGAT
GGTCTTTAGAAATAGATTCTCATCTGATACTCAGCAGAAATATCTGCGAGACCTGGAATGGGAT
GAGGGCAGAAAACACTACACAGGCCTCCAAGGCAGCACCAGGGCCAATTTCTCTAATGGGTGGA
AGCTGGAACTGCCGGTGCTCAGACCCTTGTGACCCCCAATCCCAAACCCACACCTGACAGCATC
CTGGGACCTCGGTGATTTGGGGTCCCCTCCCCCTTCTCTCATCTCTCCATCCCCCTTCTTATTA
TCCCTCAAAAGAAACCACAGCAGGGTCTCCACCCATTACACCATGATGATGCCCAACTGTTTTT
AAGAAAGCTGGAAGCCTACAGCATCCCATGGACCATGGGGTGAGTGTCCTCTGAGAGCCCTCTG
AGCTTGACCTTTGACCTGGAGGGTCCCAGACCTTTCTGAGCCCTGCCTAAAGGCTAGCATTTTA
CCACTAGGACAAGCTTAGCAATTGAGGACACCCCTACCCCAAATTCCAGTTCTTATGTGATTTT
AACCATTCAACTTGCTGTTGGGTTTTAATTCTCTAATTATTATTATTATTGTTATTATTTTTTA
GGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
CAGTCACACATTAGGGTTAGGATTAAACTTTGTTTAGATGTACCATAATTAACTTGGCTAGTTG
ATTGTTTGAAGTCTATGGAAGAAATAGTTTTATGCAAAATTTTAAAAATGCCAGTCTGGTCAGG
GAGGTGGGGGTTTCAGTGCTGTCGGAAAGCAGGAGGGCTGTCAGGTAGAGACATCATATATCTC
GGTTGTATCACATGTGAGCAAGCCCAGGTTGACCCTGTGATGTGAATTGATCTGACCAGACTGT
ATTAAATACGTTAGTACGTTACTCTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020928752	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000050343.2
	ENSSSCP00000052980
	ENSSSCP00000052980.1

RefSeq Acc Id:

XP_020928752 ⟸ XM_021073093

- UniProtKB:

A0A287B916 (UniProtKB/TrEMBL), A0A8D0K082 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLAACSE
YFESVFSAQLGDGGTAEGGPADXGGAAAAPGGGAGGSRELEMHTISSKVFGDILDFAYTSRIVV
RLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGTSDLGFPLDMTNG
AALAANSNGIAGSMQPEEEAARAAGAAIASQASLPVLPGVDRLPMVAGPLSPQLLTSPFPNVAS
SAPPLTGKRGRGRPRKANLLDSMFGSPGGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQ
LGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS
CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQTCN
ASFATRDRLRSHLACHEDKVPCQVCGKYLRAAYMADHLKKHSEGPSNFCSICNRGFSSASYLKV
HVKTHHGVPLPQVSRHQEPIPNGGAAFHCARTYGNKEGQKCSHQDPIESSDSYGDLSDASDLKT
PEKQSTNGSFCDMAVPKNKLESDGEKKYPCPECGSFFRSKSYLNKHIQKVHVRALGGPLGDLGP
TLGSPFSPQQNMSLLESFGFQIVQSAFASSLVDPEVDQQPMGPEGK

hide sequence

Ensembl Acc Id:

ENSSSCP00000050343 ⟸ ENSSSCT00000049659

Ensembl Acc Id:

ENSSSCP00000010698 ⟸ ENSSSCT00000010984

Ensembl Acc Id:

ENSSSCP00000052980 ⟸ ENSSSCT00000065454

Protein Domains

BTB C2H2-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000010027	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000049659.3	UniProtKB/TrEMBL
	ENSSSCT00000065454	ENTREZGENE
	ENSSSCT00000065454.3	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	BTB/POZ_dom	UniProtKB/TrEMBL
	HMGI/Y_DNA-bd_CS	UniProtKB/TrEMBL
	SKP1/BTB/POZ_sf	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
NCBI Gene	PATZ1	ENTREZGENE
PANTHER	GM08392P	UniProtKB/TrEMBL
	ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 11	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
Pfam	BTB	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
	zf-C2H2_assoc3	UniProtKB/TrEMBL
PROSITE	BTB	UniProtKB/TrEMBL
	HMGI_Y	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	BTB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54695	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0A287B2H0_PIG	UniProtKB/TrEMBL
	A0A287B916	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0K082	ENTREZGENE
UniProt Secondary	A0A8D0K082	UniProtKB/TrEMBL
VGNC ID	VGNC:91190	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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