INPPL1 (inositol polyphosphate phosphatase like 1) - Rat Genome Database

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Gene: INPPL1 (inositol polyphosphate phosphatase like 1) Sus scrofa
Analyze
Symbol: INPPL1
Name: inositol polyphosphate phosphatase like 1
RGD ID: 14178043
Description: ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN apoptotic process (ortholog); ERK1 and ERK2 cascade (ortholog); establishment of mitotic spindle orientation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; phosphatidylinositol 3-kinase class I signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 7b (ortholog); cerebral folate receptor alpha deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nuclear speck; nucleus; basal plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Inositol polyphosphate phosphatase-like protein 1; INPPL-1; phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2; phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2; SH2 domain-containing inositol phosphatase 2; SH2 domain-containing inositol-5'-phosphatase 2; SHIP-2; SHIP2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl96,793,069 - 6,808,028 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.196,793,971 - 6,807,286 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.297,554,374 - 7,570,176 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
basal plasma membrane  (IEA,ISS)
cell projection  (IEA)
cytoplasm  (IEA)
cytoskeleton  (IEA)
cytosol  (IBA,IEA)
filopodium  (IEA)
Golgi apparatus  (IEA)
lamellipodium  (IEA,ISO)
membrane  (IEA)
nuclear speck  (IDA,IEA)
nucleus  (IDA,IEA)
plasma membrane  (IEA)
spindle pole  (IEA,ISS)

References
Additional References at PubMed
PMID:12847108   PMID:14681463   PMID:21935613   PMID:22301074   PMID:31100035  


Genomics

Comparative Map Data
INPPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl96,793,069 - 6,808,028 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.196,793,971 - 6,807,286 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.297,554,374 - 7,570,176 (+)NCBISscrofa10.2Sscrofa10.2susScr3
INPPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381172,223,563 - 72,239,147 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1172,223,701 - 72,239,147 (+)EnsemblGRCh38hg38GRCh38
GRCh371171,935,811 - 71,950,191 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361171,613,473 - 71,627,797 (+)NCBINCBI36Build 36hg18NCBI36
Build 341171,613,472 - 71,627,796NCBI
Celera1169,237,286 - 69,251,595 (+)NCBICelera
Cytogenetic Map11q13.4NCBI
HuRef1168,229,043 - 68,243,351 (+)NCBIHuRef
CHM1_11171,819,333 - 71,833,642 (+)NCBICHM1_1
T2T-CHM13v2.01172,149,924 - 72,165,764 (+)NCBIT2T-CHM13v2.0
Inppl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397101,471,839 - 101,487,419 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7101,471,839 - 101,487,436 (-)EnsemblGRCm39 Ensembl
GRCm387101,822,632 - 101,838,226 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7101,822,632 - 101,838,229 (-)EnsemblGRCm38mm10GRCm38
MGSCv377108,971,146 - 108,986,740 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367101,696,482 - 101,711,897 (-)NCBIMGSCv36mm8
Celera7102,194,349 - 102,209,965 (-)NCBICelera
Cytogenetic Map7E2NCBI
cM Map754.67NCBI
Inppl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81165,595,047 - 165,609,503 (-)NCBIGRCr8
mRatBN7.21156,183,043 - 156,197,500 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1156,183,059 - 156,197,500 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1164,173,364 - 164,187,835 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01171,353,452 - 171,367,925 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01164,230,970 - 164,245,436 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01166,898,177 - 166,912,524 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1166,899,894 - 166,912,524 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01173,087,891 - 173,102,238 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41159,278,131 - 159,292,740 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11159,357,146 - 159,371,757 (-)NCBI
Celera1154,261,664 - 154,276,489 (-)NCBICelera
Cytogenetic Map1q32NCBI
Inppl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541419,145,432 - 19,163,923 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541419,146,304 - 19,163,923 (-)NCBIChiLan1.0ChiLan1.0
INPPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2973,170,486 - 73,186,205 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11174,213,883 - 74,229,609 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01167,302,066 - 67,317,785 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11170,527,525 - 70,540,623 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1170,527,017 - 70,540,846 (+)Ensemblpanpan1.1panPan2
INPPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12125,900,308 - 25,914,527 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2125,900,900 - 25,915,577 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2125,670,004 - 25,684,057 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02126,108,942 - 26,122,997 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2126,108,951 - 26,124,170 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12125,900,410 - 25,914,476 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02126,116,609 - 26,130,663 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02126,018,164 - 26,032,213 (-)NCBIUU_Cfam_GSD_1.0
Inppl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494759,924,592 - 59,940,332 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364981,524,128 - 1,540,578 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364981,524,128 - 1,539,680 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
INPPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1163,443,819 - 63,459,067 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl163,444,713 - 63,459,776 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604362,425,383 - 62,440,788 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Inppl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248174,779,057 - 4,793,732 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248174,779,875 - 4,794,644 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in INPPL1
466 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000016162   ⟹   ENSSSCP00000015729
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl96,793,069 - 6,808,028 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000082421   ⟹   ENSSSCP00000069131
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl96,792,884 - 6,808,028 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000088713   ⟹   ENSSSCP00000074002
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl96,793,069 - 6,808,028 (+)Ensembl
RefSeq Acc Id: NM_001190279   ⟹   NP_001177208
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.196,793,971 - 6,807,286 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001177208 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ADG23056 (Get FASTA)   NCBI Sequence Viewer  
  D7PF45 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000074002
  ENSSSCP00000074002.1
  ENSSSCP00040035806.1
  ENSSSCP00050016115.1
  ENSSSCP00055041167.1
  ENSSSCP00060046483.1
  ENSSSCP00060046513.1
RefSeq Acc Id: NP_001177208   ⟸   NM_001190279
- UniProtKB: A0A480I2F7 (UniProtKB/TrEMBL),   A0A8D1RT36 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000074002   ⟸   ENSSSCT00000088713
Ensembl Acc Id: ENSSSCP00000015729   ⟸   ENSSSCT00000016162
Ensembl Acc Id: ENSSSCP00000069131   ⟸   ENSSSCT00000082421
Protein Domains
SAM   SH2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000014811 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00040060001 UniProtKB/TrEMBL
  ENSSSCG00050028935 UniProtKB/TrEMBL
  ENSSSCG00055025480 UniProtKB/TrEMBL
  ENSSSCG00060076105 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000088713 ENTREZGENE
  ENSSSCT00000088713.1 UniProtKB/TrEMBL
  ENSSSCT00040082253.1 UniProtKB/TrEMBL
  ENSSSCT00050038931.1 UniProtKB/TrEMBL
  ENSSSCT00055051505.1 UniProtKB/TrEMBL
  ENSSSCT00060105661.1 UniProtKB/TrEMBL
  ENSSSCT00060105710.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.505.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.60.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Endo/exonu/phosph_ase_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IPPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:100462718 UniProtKB/Swiss-Prot
NCBI Gene INPPL1 ENTREZGENE
PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 5-PHOSPHATASE 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Exo_endo_phos2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS SH2DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SAM_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IPPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SAM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47769 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF55550 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56219 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A480I2F7 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2RAE7_PIG UniProtKB/TrEMBL
  A0A8D1M1W6_PIG UniProtKB/TrEMBL
  A0A8D1RT36 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1WY24_PIG UniProtKB/TrEMBL
  D7PF45 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary F1SUW7 UniProtKB/Swiss-Prot
VGNC ID VGNC:89148 ENTREZGENE