DIRAS3 (DIRAS family GTPase 3) - Rat Genome Database

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Gene: DIRAS3 (DIRAS family GTPase 3) Sus scrofa
Analyze
Symbol: DIRAS3
Name: DIRAS family GTPase 3
RGD ID: 14155528
Description: ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); INVOLVED IN signal transduction (inferred); ASSOCIATED WITH hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN membrane (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: GTP-binding protein Di-Ras3; GTP-binding RAS-like protein 3
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6144,576,342 - 144,578,818 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16144,576,342 - 144,578,820 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26133,865,007 - 133,867,486 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DIRAS3Pigintellectual disability  ISORGD:13436158554872ClinVar Annotator: match by term: Intellectual disability, severeClinVarPMID:25741868
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DIRAS3Pighepatocellular carcinoma  ISORGD:13436159068941CTD Direct Evidence: marker/mechanismCTDPMID:28284560


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DIRAS3Pigdeoxynivalenol increases expressionEXP 6480464deoxynivalenol results in increased expression of DIRAS3 mRNACTDPMID:35307453


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DIRAS3Pigsignal transduction involved_inIEAInterPro:IPR020849150520179 InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DIRAS3Pigmembrane located_inIEAInterPro:IPR020849150520179 InterProGO_REF:0000002
DIRAS3Pigmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
DIRAS3Pigplasma membrane is_active_inIBACGD:CAL0000184093|CGD:CAL0000199219|FB:FBgn0003205|FB:FBgn0015286|MGI:108053|MGI:108054|MGI:97852|PANTHER:PTN000631348|PomBase:SPAC17H9.09c|RGD:2827|RGD:619851|RGD:620590|SGD:S000003384|SGD:S000005042|SGD:S000005627|UniProtKB:E9QX28|UniProtKB:O95057|UniProtKB:P01112|UniProtKB:P01116|UniProtKB:P10114|UniProtKB:P11233|UniProtKB:P11234|UniProtKB:P61225|UniProtKB:P62070|UniProtKB:Q96HU8|UniProtKB:Q99578|UniProtKB:Q9Y3L5|dictyBase:DDB_G0291237|dictyBase:DDB_G0292998|dictyBase:DDB_G0293434150520179 GO_CentralGO_REF:0000033

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
DIRAS3PigGDP binding enablesIBAPANTHER:PTN000631348|PomBase:SPAC17H9.09c|PomBase:SPBC428.16c|RGD:2981|RGD:621840|UniProtKB:P01112|UniProtKB:P10114|UniProtKB:P10301|UniProtKB:P11233|UniProtKB:P11234|UniProtKB:P61224|UniProtKB:P61225|UniProtKB:Q15382|UniProtKB:Q9Y3L5150520179 GO_CentralGO_REF:0000033
DIRAS3PigGTP binding enablesIBAMGI:108053|MGI:108054|MGI:96224|MGI:97912|PANTHER:PTN000631348|PomBase:SPAC17H9.09c|PomBase:SPBC428.16c|RGD:1359694|RGD:621840|SGD:S000005042|UniProtKB:O95057|UniProtKB:P01112|UniProtKB:P10114|UniProtKB:P11233|UniProtKB:P11234|UniProtKB:P61224|UniProtKB:P61225|UniProtKB:Q15382|UniProtKB:Q8TAI7|UniProtKB:Q92963|UniProtKB:Q96HU8|UniProtKB:Q9Y3L5|WB:WBGene00002335|dictyBase:DDB_G0281385|dictyBase:DDB_G0291237|dictyBase:DDB_G0293434150520179 GO_CentralGO_REF:0000033
DIRAS3PigGTP binding enablesIEAUniProtKB-KW:KW-0342150520179 UniProtGO_REF:0000043
DIRAS3PigGTP binding enablesIEAInterPro:IPR001806|InterPro:IPR005225|InterPro:IPR020849150520179 InterProGO_REF:0000002
DIRAS3PigGTPase activity enablesIEAInterPro:IPR001806150520179 InterProGO_REF:0000002
DIRAS3PigGTPase activity enablesIBACGD:CAL0000181665|CGD:CAL0000184093|CGD:CAL0000199219|FB:FBgn0003205|FB:FBgn0004636|FB:FBgn0015286|FB:FBgn0041191|MGI:108054|MGI:1927243|MGI:96680|MGI:97852|PANTHER:PTN000631348|PomBase:SPAC17H9.09c|PomBase:SPBC428.16c|RGD:621840|SGD:S000003384|SGD:S000005042|SGD:S000005627|UniProtKB:O14807|UniProtKB:O95057|UniProtKB:P01111|UniProtKB:P01112|UniProtKB:P01116|UniProtKB:P10114|UniProtKB:P10301|UniProtKB:P11233|UniProtKB:P11234|UniProtKB:P61224|UniProtKB:P62070|UniProtKB:Q12526|UniProtKB:Q15382|UniProtKB:Q92963|UniProtKB:Q96A58|UniProtKB:Q96HU8150520179 GO_CentralGO_REF:0000033
DIRAS3Pigprotein binding enablesISOUniProtKB:P407639068941 PMID:21643014IntActPMID:21643014
DIRAS3Pigprotein binding enablesISOUniProtKB:Q6FHY59068941 PMID:32296183IntActPMID:32296183

PMID:16978188   PMID:17897599   PMID:19571260   PMID:22301074   PMID:30032202  



DIRAS3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6144,576,342 - 144,578,818 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16144,576,342 - 144,578,820 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26133,865,007 - 133,867,486 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DIRAS3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38168,045,962 - 68,050,627 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl168,045,886 - 68,051,717 (-)EnsemblGRCh38hg38GRCh38
GRCh37168,511,645 - 68,516,310 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36168,284,233 - 68,289,048 (-)NCBINCBI36Build 36hg18NCBI36
Build 34168,223,667 - 68,228,481NCBI
Celera166,802,348 - 66,807,163 (-)NCBICelera
Cytogenetic Map1p31.3NCBI
HuRef166,621,747 - 66,626,564 (-)NCBIHuRef
CHM1_1168,627,001 - 68,631,820 (-)NCBICHM1_1
T2T-CHM13v2.0167,923,423 - 67,928,086 (-)NCBIT2T-CHM13v2.0
Gm266
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912111,451,043 - 111,452,257 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl12111,451,043 - 111,452,257 (-)EnsemblGRCm39 Ensembl
GRCm3812111,484,609 - 111,485,823 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12111,484,609 - 111,485,823 (-)EnsemblGRCm38mm10GRCm38
MGSCv3712112,722,820 - 112,724,034 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3612111,932,419 - 111,933,604 (-)NCBIMGSCv36mm8
Celera12112,674,808 - 112,676,022 (-)NCBICelera
Cytogenetic Map12F1NCBI
cM Map1261.01NCBI
Diras3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86136,346,157 - 136,347,371 (-)NCBIGRCr8
mRatBN7.26130,524,972 - 130,526,186 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6130,524,742 - 130,530,825 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.06135,938,345 - 135,940,205 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6135,938,935 - 135,939,534 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06144,475,515 - 144,477,379 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46136,245,520 - 136,247,072 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera6128,080,876 - 128,082,770 (-)NCBICelera
Cytogenetic Map6q32NCBI
DIRAS3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21158,813,884 - 158,825,676 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11157,979,647 - 157,985,477 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0167,283,556 - 67,288,561 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1169,239,462 - 69,244,436 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl169,240,117 - 69,240,806 (-)Ensemblpanpan1.1panPan2
LOC480441
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1871,032,087 - 71,033,379 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha870,544,283 - 70,545,574 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0871,309,047 - 71,310,337 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1870,972,635 - 70,973,926 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0871,037,280 - 71,038,571 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0871,437,437 - 71,438,728 (-)NCBIUU_Cfam_GSD_1.0
Diras3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505880,798,207 - 80,800,867 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365913,688,774 - 3,691,342 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DIRAS3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12065,060,391 - 65,065,165 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2065,063,822 - 65,064,511 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603352,548,119 - 52,553,856 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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Variants in DIRAS3
53 total Variants



alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 2 23 3 1 3 9 7 23 3 6 2



Ensembl Acc Id: ENSSSCT00000004202   ⟹   ENSSSCP00000004108
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl6144,576,342 - 144,578,818 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000067445   ⟹   ENSSSCP00000066495
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl6144,558,104 - 144,578,820 (+)Ensembl
RefSeq Acc Id: NM_001044598   ⟹   NP_001038063
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.16144,576,342 - 144,578,820 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001038063   ⟸   NM_001044598
- UniProtKB: Q15B95 (UniProtKB/TrEMBL),   A0A4X1U720 (UniProtKB/TrEMBL),   M9NH37 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000004108   ⟸   ENSSSCT00000004202
Ensembl Acc Id: ENSSSCP00000066495   ⟸   ENSSSCT00000067445



1 to 40 of 55 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSSCG00000003797 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015067110 UniProtKB/TrEMBL
  ENSSSCG00025027088 UniProtKB/TrEMBL
  ENSSSCG00030016107 UniProtKB/TrEMBL
  ENSSSCG00035069146 UniProtKB/TrEMBL
  ENSSSCG00040050274 UniProtKB/TrEMBL
  ENSSSCG00045020258 UniProtKB/TrEMBL
  ENSSSCG00050045246 UniProtKB/TrEMBL
  ENSSSCG00055026340 UniProtKB/TrEMBL
  ENSSSCG00060075982 UniProtKB/TrEMBL
  ENSSSCG00065023977 UniProtKB/TrEMBL
  ENSSSCG00070014487 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000004202 ENTREZGENE
  ENSSSCT00000004202.3 UniProtKB/TrEMBL
  ENSSSCT00015089890.1 UniProtKB/TrEMBL
  ENSSSCT00015090011.1 UniProtKB/TrEMBL
  ENSSSCT00025036674.1 UniProtKB/TrEMBL
  ENSSSCT00025036744.1 UniProtKB/TrEMBL
  ENSSSCT00030022314.1 UniProtKB/TrEMBL
  ENSSSCT00030022322.1 UniProtKB/TrEMBL
  ENSSSCT00035093373.1 UniProtKB/TrEMBL
  ENSSSCT00035093382.1 UniProtKB/TrEMBL
  ENSSSCT00040067831.1 UniProtKB/TrEMBL
  ENSSSCT00045034532.1 UniProtKB/TrEMBL
  ENSSSCT00045034570.1 UniProtKB/TrEMBL
  ENSSSCT00050061581.1 UniProtKB/TrEMBL
  ENSSSCT00050061590.1 UniProtKB/TrEMBL
  ENSSSCT00055052031.1 UniProtKB/TrEMBL
  ENSSSCT00055052079.1 UniProtKB/TrEMBL
  ENSSSCT00060104118.1 UniProtKB/TrEMBL
  ENSSSCT00060104163.1 UniProtKB/TrEMBL
  ENSSSCT00065031902.1 UniProtKB/TrEMBL
  ENSSSCT00065031910.1 UniProtKB/TrEMBL
  ENSSSCT00070028406.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
  Small_GTPase_Ras-type UniProtKB/TrEMBL
KEGG Report ssc:733668 UniProtKB/TrEMBL
1 to 40 of 55 rows