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Gene: TBX19 (T-box transcription factor 19) Sus scrofa

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Symbol:

TBX19

Name:

T-box transcription factor 19

RGD ID:

14112760

Description:

ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (inferred); DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Adrenal Insufficiency (ortholog); adrenocorticotropic hormone deficiency (ortholog); alcohol dependence (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

T-box 19; T-box transcription factor TBX19

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	82,663,581 - 82,697,813 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	82,663,121 - 82,699,261 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	90,337,691 - 90,371,971 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TBX19	Pig	alcohol dependence	susceptibility	ISO	RGD:1320875	9068941	DNA:SNP:: (rs1003502) (human)	RGD	PMID:18438686\|REF_RGD_ID:401851917
TBX19	Pig	inherited metabolic disorder		ISO	RGD:1320875	9068941	ACTH deficiency, OMIM:201400	RGD	PMID:11290323\|REF_RGD_ID:1599334

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TBX19	Pig	Adrenal Insufficiency		ISO	RGD:1320875	8554872	ClinVar Annotator: match by term: Adrenal insufficiency	ClinVar
TBX19	Pig	adrenocorticotropic hormone deficiency		ISO	RGD:1320875	8554872	ClinVar Annotator: match by term: ACTH deficiency \| ClinVar Annotator: match by term: TBX19-related condition	ClinVar	PMID:11290323\|PMID:12651888\|PMID:15476446\|PMID:15613420\|PMID:17576681\|PMID:17652218\|PMID:22170728\|PMID:25326635\|PMID:25741868\|PMID:2830787\|PMID:28492532\|PMID:33423260\|PMID:9536098
TBX19	Pig	gastrointestinal stromal tumor		ISO	RGD:1320875	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:28492532
TBX19	Pig	genetic disease		ISO	RGD:1320875	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:28492532
TBX19	Pig	immunodeficiency 25		ISO	RGD:1320875	8554872	ClinVar Annotator: match by term: Immunodeficiency 25	ClinVar	PMID:28492532
TBX19	Pig	lymphatic malformation 6		ISO	RGD:1320875	8554872	ClinVar Annotator: match by term: Lymphedema, hereditary, III	ClinVar	PMID:25741868
TBX19	Pig	parathyroid carcinoma		ISO	RGD:1320875	8554872	ClinVar Annotator: match by term: Parathyroid carcinoma	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TBX19	Pig	alcohol use disorder		ISO	RGD:1320875	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:18438686

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TBX19	Pig	adrenocorticotropic hormone deficiency		ISO	RGD:1320875	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TBX19	Pig	cell fate commitment	acts_upstream_of_or_within	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	cell fate specification	involved_in	IBA	FB:FBgn0261963\|MGI:102539\|MGI:1201683\|MGI:98493\|PANTHER:PTN000137774\|WB:WBGene00003106\|WB:WBGene00003376\|WB:WBGene00006543\|WB:WBGene00006554\|ZFIN:ZDB-GENE-001228-1\|ZFIN:ZDB-GENE-990726-27	150520179		GO_Central	GO_REF:0000033
TBX19	Pig	heart morphogenesis	involved_in	IBA	PANTHER:PTN001681641\|UniProtKB:O15178\|ZFIN:ZDB-GENE-980526-437	150520179		GO_Central	GO_REF:0000033
TBX19	Pig	mesoderm formation	involved_in	IBA	MGI:98472\|PANTHER:PTN001681641\|ZFIN:ZDB-GENE-980526-437	150520179		GO_Central	GO_REF:0000033
TBX19	Pig	pituitary gland development	acts_upstream_of_or_within	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	positive regulation of DNA-templated transcription	involved_in	IEA	InterPro:IPR046360	150520179		InterPro	GO_REF:0000002
TBX19	Pig	positive regulation of transcription by RNA polymerase II	involved_in	ISO	RGD:1320876	9068941	PMID:11290323	NTNU_SB	PMID:11290323
TBX19	Pig	positive regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	regulation of cell differentiation	acts_upstream_of_or_within	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	regulation of cell population proliferation	acts_upstream_of_or_within	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	regulation of DNA-templated transcription	involved_in	IEA	InterPro:IPR001699\|InterPro:IPR002070\|InterPro:IPR008967\|InterPro:IPR018186\|InterPro:IPR036960	150520179		InterPro	GO_REF:0000002
TBX19	Pig	regulation of DNA-templated transcription	acts_upstream_of_or_within	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	regulation of transcription by RNA polymerase II	involved_in	IBA	FB:FBgn0000179\|FB:FBgn0011723\|FB:FBgn0016660\|FB:FBgn0021767\|FB:FBgn0028789\|FB:FBgn0035954\|FB:FBgn0035956\|FB:FBgn0261963\|MGI:102539\|MGI:102541\|MGI:107404\|MGI:1201683\|MGI:1277234\|MGI:1352483\|MGI:1888496\|MGI:1888984\|MGI:1891158\|MGI:1923615\|MGI:98472\|MGI:98493\|MGI:98494\|MGI:98495\|PANTHER:PTN004251338\|RGD:735203\|UniProtKB:A0A8J1KRG6\|UniProtKB:O15119\|UniProtKB:O15178\|UniProtKB:O95936\|UniProtKB:Q13207\|UniProtKB:Q99593\|UniProtKB:Q9UL17\|UniProtKB:Q9Y458\|WB:WBGene00003106\|WB:WBGene00004750\|WB:WBGene00006554\|ZFIN:ZDB-GENE-991124-7	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TBX19	Pig	chromatin	is_active_in	IBA	MGI:102539\|MGI:1201683\|MGI:98472\|PANTHER:PTN004251338\|UniProtKB:O15178\|ZFIN:ZDB-GENE-020416-5\|ZFIN:ZDB-GENE-980526-437\|ZFIN:ZDB-GENE-990615-5	150520179		GO_Central	GO_REF:0000033
TBX19	Pig	nucleus	located_in	IEA	InterPro:IPR002070\|InterPro:IPR018186\|InterPro:IPR036960	150520179		InterPro	GO_REF:0000002
TBX19	Pig	nucleus	is_active_in	IBA	FB:FBgn0000179\|FB:FBgn0011723\|FB:FBgn0035954\|FB:FBgn0035956\|FB:FBgn0266083\|MGI:102539\|MGI:102541\|MGI:107404\|MGI:1201683\|MGI:1277234\|MGI:1888496\|MGI:1888984\|MGI:1923615\|MGI:98472\|MGI:98493\|MGI:98494\|MGI:98495\|PANTHER:PTN004251338\|UniProtKB:O15119\|UniProtKB:O15178\|UniProtKB:O93288\|UniProtKB:O95935\|UniProtKB:Q13207\|UniProtKB:Q16650\|UniProtKB:Q8IWI9\|UniProtKB:Q8UW76\|UniProtKB:Q99593\|UniProtKB:Q9PWE8\|UniProtKB:Q9Y458\|WB:WBGene00003106\|WB:WBGene00003376\|WB:WBGene00004750\|WB:WBGene00006543\|WB:WBGene00006545\|WB:WBGene00006546\|WB:WBGene00006556\|WB:WBGene00006557\|ZFIN:ZDB-GENE-001228-1\|ZFIN:ZDB-GENE-980526-437\|ZFIN:ZDB-GENE-990615-5\|ZFIN:ZDB-GENE-991124-7	150520179		GO_Central	GO_REF:0000033
TBX19	Pig	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043
TBX19	Pig	nucleus	located_in	IEA	UniRule:UR000400702	150520179		UniProt	GO_REF:0000104
TBX19	Pig	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
TBX19	Pig	cis-regulatory region sequence-specific DNA binding	enables	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	DNA binding	enables	IEA	UniRule:UR000400702	150520179		UniProt	GO_REF:0000104
TBX19	Pig	DNA binding	enables	IEA	UniProtKB-KW:KW-0238	150520179		UniProt	GO_REF:0000043
TBX19	Pig	DNA binding	enables	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	DNA-binding transcription activator activity, RNA polymerase II-specific	enables	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	DNA-binding transcription factor activity	enables	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	DNA-binding transcription factor activity	enables	IEA	InterPro:IPR001699\|InterPro:IPR002070\|InterPro:IPR008967\|InterPro:IPR018186\|InterPro:IPR036960\|InterPro:IPR046360	150520179		InterPro	GO_REF:0000002
TBX19	Pig	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IBA	FB:FBgn0011723\|FB:FBgn0028789\|FB:FBgn0035956\|FB:FBgn0261963\|MGI:102541\|MGI:1277234\|MGI:1352483\|MGI:1888496\|MGI:1888984\|MGI:1891158\|MGI:1923615\|MGI:98472\|MGI:98493\|PANTHER:PTN004251338\|UniProtKB:O15119\|UniProtKB:O15178\|UniProtKB:Q13207\|UniProtKB:Q99593\|UniProtKB:Q9UL17\|UniProtKB:Q9UMR3\|ZFIN:ZDB-GENE-001228-1	150520179		GO_Central	GO_REF:0000033
TBX19	Pig	protein binding	enables	ISO	UniProtKB:O14964\|UniProtKB:O75603\|UniProtKB:O95231\|UniProtKB:O95947\|UniProtKB:P0CG20\|UniProtKB:P31273\|UniProtKB:P78337\|UniProtKB:P78412\|UniProtKB:Q14511-2\|UniProtKB:Q15915\|UniProtKB:Q17RB8\|UniProtKB:Q7Z3K3\|UniProtKB:Q8WUD1\|UniProtKB:Q92734	9068941	PMID:32296183	IntAct	PMID:32296183
TBX19	Pig	protein binding	enables	ISO	PR:P33242	9068941	PMID:12651892	MGI	PMID:12651892
TBX19	Pig	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IBA	MGI:102539\|MGI:102541\|MGI:107404\|MGI:1277234\|MGI:1888496\|MGI:1891158\|MGI:1923615\|MGI:98472\|MGI:98494\|MGI:98495\|PANTHER:PTN004251338\|UniProtKB:O15119\|UniProtKB:O15178\|UniProtKB:Q13207\|UniProtKB:Q99593	150520179		GO_Central	GO_REF:0000033
TBX19	Pig	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IEA	InterPro:IPR001699	150520179		InterPro	GO_REF:0000002
TBX19	Pig	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	IEA	UniProtKB:Q99ME7\|ensembl:ENSMUSP00000027859	150520179		Ensembl	GO_REF:0000107
TBX19	Pig	sequence-specific double-stranded DNA binding	enables	IEA	UniProtKB:O60806\|ensembl:ENSP00000356795	150520179		Ensembl	GO_REF:0000107

PMID:22301074	PMID:30032202

TBX19
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	82,663,581 - 82,697,813 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	82,663,121 - 82,699,261 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	90,337,691 - 90,371,971 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TBX19
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	168,280,877 - 168,314,426 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	168,280,877 - 168,314,426 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	168,250,115 - 168,283,664 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	166,516,902 - 166,550,288 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	164,981,935 - 165,015,320	NCBI
Celera	1	141,359,305 - 141,392,691 (+)	NCBI		Celera
Cytogenetic Map	1	q24.2	NCBI
HuRef	1	139,494,108 - 139,527,510 (+)	NCBI		HuRef
CHM1_1	1	169,672,579 - 169,706,005 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	167,632,365 - 167,665,914 (+)	NCBI		T2T-CHM13v2.0

Tbx19
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	164,965,403 - 164,988,342 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	164,965,424 - 164,988,342 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	165,137,834 - 165,160,773 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	165,137,855 - 165,160,773 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	167,067,984 - 167,090,904 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	166,974,528 - 166,997,448 (-)	NCBI		MGSCv36	mm8
Celera	1	167,576,045 - 167,599,365 (-)	NCBI		Celera
Cytogenetic Map	1	H2.2	NCBI
cM Map	1	72.47	NCBI

Tbx19
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	79,983,935 - 80,016,219 (-)	NCBI		GRCr8
mRatBN7.2	13	77,450,848 - 77,484,475 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	77,450,849 - 77,504,163 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	80,065,393 - 80,087,811 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	81,369,403 - 81,391,824 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	78,613,788 - 78,636,229 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	83,403,263 - 83,426,305 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	83,403,264 - 83,425,641 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	88,283,231 - 88,308,545 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	80,890,762 - 80,913,604 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	80,906,005 - 80,927,585 (-)	NCBI
Celera	13	77,164,494 - 77,186,402 (-)	NCBI		Celera
Cytogenetic Map	13	q23	NCBI

Tbx19
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955462	8,830,280 - 8,856,721 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955462	8,830,280 - 8,856,721 (-)	NCBI	ChiLan1.0	ChiLan1.0

TBX19
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	30,198,912 - 30,248,410 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	30,185,850 - 30,365,512 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	29,742,783 - 29,766,870 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	30,027,215 - 30,051,308 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	29,804,955 - 30,156,563 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	29,859,994 - 29,884,080 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	29,898,311 - 29,922,377 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	30,136,825 - 30,160,908 (-)	NCBI		UU_Cfam_GSD_1.0

Tbx19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	100,142,778 - 100,166,609 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936481	17,990,435 - 18,013,193 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936481	17,990,435 - 18,013,180 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TBX19
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	60,732,455 - 60,803,194 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	60,730,901 - 60,764,487 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	62,455,870 - 62,527,395 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tbx19
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624826	6,243,809 - 6,267,989 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624826	6,243,809 - 6,268,973 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in TBX19
1411 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	ectoderm	endocrine system	mesenchyme	nervous system	renal system	reproductive system
2	8	3	3	8	2	3


RefSeq Transcripts	XM_001928456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013996800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK349244	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU151849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01127577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000006904 ⟹ ENSSSCP00000006716

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	82,663,581 - 82,697,813 (-)	Ensembl

RefSeq Acc Id:

XM_001928456 ⟹ XP_001928491

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	82,663,124 - 82,699,261 (-)	NCBI

Sequence:

show sequence

CTCCATAAGGCCCTTCTTGAAGCGGATCTCACTCTGCTCTCTGTGGTTCTGGCTACACTTGGCCTCCTTGTGGTTCTCTTACTGGCCTGAGCCATGCTTTCTCACGTGTGGTTCCTCTGCCTGAACAC
TTCCCCCAACTCTCTAACTCTTTCTAGACTAAGACCTTGTCATCATTTAGGTCTCAGCTGAAATAGCTCTTCCTCAGAGAAGACTGTCCACACAACCCCACCTAGTTAGGATCCTCCCCATCTTGCTT
TGCACACATTTTCCACCCTCTCACCCTTTTCCATAGTCCTCACAGAATGATCACTCTTTTACTCAATTGTTTATGTTATTCATCTCTGTCATATTGTGAACTCCACGAAGGCAGGGCCATTTCTGATT
CATTCATCATTGGATGTGAGGCTTCGTCAGTACCGAGTAGTACTTAGTAGTCACTGAATGCATTTTGTCTATCATCCTTACCCTGACTTTACCACATCTTTTTGCTTTTACCTATTTATTTATTTTCG
ATCTTCTACAACTTTCTGCGGTAGCAAGAGAACAACTCACAACTCCACTAGTAGAATCTCCCCAGCAAAAGTGGGGATTCTCCCCAGAATGCCAGAATGCCTTTCTGGACCCAGGACAAAAATTGCTC
TCCATGCCAATGTGAATACTTATCTTCACTCACTGGGGGCGGAATGCCTCCTTAGAGAGATTATGTATGATGCTAAGTGATTTTTGTTCTCCCTCTGGCTAGGGCTGGAGAGAAGAGATATTTGGGCT
GTGGATTCTATGAAGGAGGAATAGGGCTCAGACCTGTTCTGCTTGTAGGAGGTAACCAGGGCCCTTGAGACAAGCAGGGTGTGAGTGTGCTCAGGACAGAGAGGACCATTAGGGGATACCTTGGGAGA
AAGAGGTCCTTAGTTCTTTCCTCCTGATCTCTGACCCTTGAGCAGGTGGCTCAAAGGACATCTTCCTTCATTCTGTGGTACACTTGTCACCATCCTTGGCACGGTGCCCTTGGCCTTCCACACATGCT
CTTCTATTCAGGGCTAGGGATTTAGGTTCTCGACTGGGTCAGGAAAGCCCGTATTGGCATCAAGTTCGCTGATCCTGCCTGGGACCTCTTTCCCTATAGGTGCCACATGCCATGATTTATACACAAAC
ATGATTTGCCTGATTGTTGCAGTCTGGGCCCGGAACAATTTTAATTAACGGGAAAATGGTCCTCAATACACCGATTAGACCTCTTCAGGTACAGCAAGATAAAAGCCTGGTAATTTGGATGGAGTACT
CTTCTTAAATGTCTACTCTATGCACAGCAGCCAATGGAAAGACAGGCTCTCTCCCACCTGATCCAATGAGTAATTAAGAGAGGGCTTTTTCTTCCCTACCTCTCCCCTCCCTCCACCCGCTTCCCCTC
CCTCAACTAAAGCTTAACAGGTTGGTGGTATAATTTGGAGACTTTCAGGGGTATCACGCCAGGAGCTTAGGCAAGAGATAGGGCATTTCTTCCCCAGCTCCCCAGGCACCGTCCAGCTGGGGTTGAAA
AGCAGACAAGTGACAAGAGGAAAAGAGGTGGAAGCAGGCAAAATAGGTGACATTTCTCAGTGAAGTTTGAGAGGGGCCCATGGCCATGAGTGAGCTGGGCACTCCGAAGACCAGCGATGGCACCGTTT
CTCGCCTGCTCAACGTGGTGGAAAGTGAGCTTCAGGCAGGGAGGGAAAAAGGCGACCCTACGGAGAAGCAACTTCAGATCATTCTGGAGGATGCCCCTCTCTGGCAGAGATTCAAGGAAGTCACTAAT
GAAATGATCGTCACCAAGAACGGCAGACGGATGTTCCCTGTCCTCAAGATTAGTGTTACGGGGCTGGACCCCAATGCCATGTATTCCCTCCTGCTGGACTTTGTCCCAACGGACAGTCACCGCTGGAA
GTACATCAATGGGGAATGGGTGCCTGCGGGCAAGCCAGAGGTTTCCAGCCACAGCTGTGTCTACATCCACCCAGACTCTCCCAACTTCGGCGCCCACTGGATGAAGGCTCCCATCTCCTTCAGCAAAG
TGAAGCTGACCAACAAGCTCAACGGAGGTGGGCAGATAATGTTGAATTCTCTGCATAAATATGAACCCCAGGTTCACATAGTGCGTGTTGGAGGTGCCCATCGAATGGTGATGAACTGCTCCTTCCCC
GAAACCCAGTTCATAGCTGTGACTGCTTATCAGAACGAGGAGATAACTGCTCTCAAAATCAAGTACAACCCTTTTGCCAAAGCCTTCTTGGATGCCAAGGAAAGGAACCACCTCAAAGATGTGCCAGA
AGCTATCTCTGAGAGCCAGCATGTGGCTTACTCTCACTTGGGAGGCTGGATCTTATCCAATTCGGATGGGATGTGCACAGCAGGAAATGGCAATTACCAGTATGCTACTCCTTTGCCTCTGTCTGCTC
CCCACACCCACCACGGCTGTGAGCACTATCCTGGCCTCCGAGGACACCACCGCCAGGCTCCCTATCCTTCTGCCTACATGCATAGAAACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCCAGCAAT
AATCTGCAAGTTTTCTCTGGAGCTGACAGCTGGACTTCCTTATCCTCCACACCCCACGCCAGCATCCTGTCTGTACCCCACACCAGCGGACCAATCAATCCAGGGCCTAGCCCCTACCCGTGCCTGTG
GACCATCAGCAACAGCGGCGGGGGCCCCGCTGGGTCGGGCCCCGAGGTGCACACCAGCTCCCCGGGAGCCTTTCTTCTGGGTAACCCAGCTGTTACTTCATCCCTCTCCACCCAGGCACCCACTTCGG
CTGGTGTGGAGGTTCTGGGGGAGCCCTCACTGACCAGCATTGCTGTGTCCACCTGGACCGCAGTGGCCTCGCATCCCTTCTCAGGCTGGGGCAGCCCCGGTGGGTGTGGGCGCCATTCTCCCTCCTCA
CTGGATAGTTAAACAGGAGCCCAGGGAAGGTGTTGGCAGATAACCTTCTATGTGTAGAGATCTTAGAGATCCCACCTACTGATACCAGTGAATCAGGCTCCAGGATCTAGCCAACCAGTGAGCAGGAT
TATACCAGAAGTACACTGGGAGATGGTTTAGTTTGGATGATGCTAATTTTGTCACCTGCATCTCTCCACCATTTTCTTTTTGTGCTCTCATTTTCTCTGCACCTTATCCATGCCATGCTTAGGCAACA
AAAGTTTACTGAGAACCTTCTTTGTGCCCTGTCCCTTTCTCTTCAAATGGTTCTAGAAAGCTGCCCTTCCTGTTCTGTGGAGGTGATGCAAAGCTGTTAAGTGAGCTCTAAATTGATCTAGCCTAAGG
CCACCACTTTGTAGCTTTGGGCAGCCCTAGAAGGTCTGTCTGTCTGGAGATCTTCTGCTCTGAGACTAAGAGAGGATGCAAATTCAAAGAGGGAAGTTAACAGCAATAGAGCTAATCACAGAGTACAG
CATTGAGAATTGAGGAAAGATTATGTTACTCCCTGGCTCAGAAACCTTCCATGGCTCACCATTGCCTTCAGAATGACACTTAACCTACCATCTGGCCTCAGACCACTTCTTCAGCTTCAGCCTTCCCC
CCCCCCCCAGCCTTCCCACCTCCCAGGGACAAGCCAAAGCACCAATCCCTGCATCAAGTGCTGATCTGCTCAGGCACATTTGACCTGGCTCCCTGCTCCCCCATTGGTTTTGCCTTTGTTGTAGAGAA
CTCACCTCATTCTGCCTTCTATTTTGATTACCTGTGTGTGTGTCTCTCTCTCTCCCACTAGACTGTGAGCCCCTTGAGGGTGAGGCCCAGCCTTCTTGTCTTGGTTCCACCCCAGCATCTCGTTCTAT
GCCTTGCCTATAGTAGGTGCCCAATAAACACTGGCTGAGTCAAATGGGTGCAAAGTGATGTTTTAGAAGGATAGCCAAGGAGCTCTTGGGGAGGCAGAGCTCAGAGGCACATGGCTTGGACAGGGAAG
TGGGTCCAAGTGGGAGCCTAGGGATGTGCTGAGTGTTACATCTGGGGTACAGCCCCTTCTCAGTGACTGATGATGTAAGGAGATGGTGTGTAGTAGAGTGGTGGTCCCCAAACACTGGTCCTTGGATA
ACCTGCACCAGGGTCACCCGGATCACCTAATAGAAATACAGATTCCTGGGCACATTCCTCACCTCTTGGATCAGAATCTTTGGGGCTGGAGTCCAGAAATTGCATCTCAAGCGAATGATCCAGAAAAC
AGTAGCTGAGCCAAACTTGACAACATCTTGCCTGGAATAGGGAAACAGAATGATAAATACTCCAGGAGGAGTTCTCGTCATGGCTCTGTGGGTTGCAAACCTGACTAGTATC

hide sequence

RefSeq Acc Id:

XM_013996800 ⟹ XP_013852254

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	82,663,121 - 82,697,432 (-)	NCBI

Sequence:

show sequence

GTGCGGTCCTGCTTGGGCTGGCAGGGCTTGGCAAGGGACCTGAGGCCCCTTGAACACTGAGGAGGCTCAGAGCAGGGTCTGGTTCAACATACTCCCGAGAAGGACAGTCTCACATGGCTTTCCCCCAG
CCAGCTCAATTAATTTCTCTGAGATCATCAGAGAAGTGGAGGGTGAAGTCACCTGTCCTGCCTGCATTTTAAAATGAAGAAATTCTGGGAAATTACTATAAAGGGGGGCATGTCCCATGGATTTGGGA
AATACACGCAAATGTCAGAAAATAATGTTAATTTTTGACTGACTATATGTCCTGGAGCATCTGGTTATCCTTGGAGCCCCAACTCTGTTCGGATAAGACGGATGTTCCCTGTCCTCAAGATTAGTGTT
ACGGGGCTGGACCCCAATGCCATGTATTCCCTCCTGCTGGACTTTGTCCCAACGGACAGTCACCGCTGGAAGTACATCAATGGGGAATGGGTGCCTGCGGGCAAGCCAGAGGTTTCCAGCCACAGCTG
TGTCTACATCCACCCAGACTCTCCCAACTTCGGCGCCCACTGGATGAAGGCTCCCATCTCCTTCAGCAAAGTGAAGCTGACCAACAAGCTCAACGGAGGTGGGCAGATAATGTTGAATTCTCTGCATA
AATATGAACCCCAGGTTCACATAGTGCGTGTTGGAGGTGCCCATCGAATGGTGATGAACTGCTCCTTCCCCGAAACCCAGTTCATAGCTGTGACTGCTTATCAGAACGAGGAGATAACTGCTCTCAAA
ATCAAGTACAACCCTTTTGCCAAAGCCTTCTTGGATGCCAAGGAAAGGAACCACCTCAAAGATGTGCCAGAAGCTATCTCTGAGAGCCAGCATGTGGCTTACTCTCACTTGGGAGGCTGGATCTTATC
CAATTCGGATGGGATGTGCACAGCAGGAAATGGCAATTACCAGTATGCTACTCCTTTGCCTCTGTCTGCTCCCCACACCCACCACGGCTGTGAGCACTATCCTGGCCTCCGAGGACACCACCGCCAGG
CTCCCTATCCTTCTGCCTACATGCATAGAAACCATTCTCCCTCAGTGAATTTGATAGAAAGCTCCAGCAATAATCTGCAAGTTTTCTCTGGAGCTGACAGCTGGACTTCCTTATCCTCCACACCCCAC
GCCAGCATCCTGTCTGTACCCCACACCAGCGGACCAATCAATCCAGGGCCTAGCCCCTACCCGTGCCTGTGGACCATCAGCAACAGCGGCGGGGGCCCCGCTGGGTCGGGCCCCGAGGTGCACACCAG
CTCCCCGGGAGCCTTTCTTCTGGGTAACCCAGCTGTTACTTCATCCCTCTCCACCCAGGCACCCACTTCGGCTGGTGTGGAGGTTCTGGGGGAGCCCTCACTGACCAGCATTGCTGTGTCCACCTGGA
CCGCAGTGGCCTCGCATCCCTTCTCAGGCTGGGGCAGCCCCGGTGGGTGTGGGCGCCATTCTCCCTCCTCACTGGATAGTTAAACAGGAGCCCAGGGAAGGTGTTGGCAGATAACCTTCTATGTGTAG
AGATCTTAGAGATCCCACCTACTGATACCAGTGAATCAGGCTCCAGGATCTAGCCAACCAGTGAGCAGGATTATACCAGAAGTACACTGGGAGATGGTTTAGTTTGGATGATGCTAATTTTGTCACCT
GCATCTCTCCACCATTTTCTTTTTGTGCTCTCATTTTCTCTGCACCTTATCCATGCCATGCTTAGGCAACAAAAGTTTACTGAGAACCTTCTTTGTGCCCTGTCCCTTTCTCTTCAAATGGTTCTAGA
AAGCTGCCCTTCCTGTTCTGTGGAGGTGATGCAAAGCTGTTAAGTGAGCTCTAAATTGATCTAGCCTAAGGCCACCACTTTGTAGCTTTGGGCAGCCCTAGAAGGTCTGTCTGTCTGGAGATCTTCTG
CTCTGAGACTAAGAGAGGATGCAAATTCAAAGAGGGAAGTTAACAGCAATAGAGCTAATCACAGAGTACAGCATTGAGAATTGAGGAAAGATTATGTTACTCCCTGGCTCAGAAACCTTCCATGGCTC
ACCATTGCCTTCAGAATGACACTTAACCTACCATCTGGCCTCAGACCACTTCTTCAGCTTCAGCCTTCCCCCCCCCCCCAGCCTTCCCACCTCCCAGGGACAAGCCAAAGCACCAATCCCTGCATCAA
GTGCTGATCTGCTCAGGCACATTTGACCTGGCTCCCTGCTCCCCCATTGGTTTTGCCTTTGTTGTAGAGAACTCACCTCATTCTGCCTTCTATTTTGATTACCTGTGTGTGTGTCTCTCTCTCTCCCA
CTAGACTGTGAGCCCCTTGAGGGTGAGGCCCAGCCTTCTTGTCTTGGTTCCACCCCAGCATCTCGTTCTATGCCTTGCCTATAGTAGGTGCCCAATAAACACTGGCTGAGTCAAATGGGTGCAAAGTG
ATGTTTTAGAAGGATAGCCAAGGAGCTCTTGGGGAGGCAGAGCTCAGAGGCACATGGCTTGGACAGGGAAGTGGGTCCAAGTGGGAGCCTAGGGATGTGCTGAGTGTTACATCTGGGGTACAGCCCCT
TCTCAGTGACTGATGATGTAAGGAGATGGTGTGTAGTAGAGTGGTGGTCCCCAAACACTGGTCCTTGGATAACCTGCACCAGGGTCACCCGGATCACCTAATAGAAATACAGATTCCTGGGCACATTC
CTCACCTCTTGGATCAGAATCTTTGGGGCTGGAGTCCAGAAATTGCATCTCAAGCGAATGATCCAGAAAACAGTAGCTGAGCCAAACTTGACAACATCTTGCCTGGAATAGGGAAACAGAATGATAAA
TACTCCAGGAGGAGTTCTCGTCATGGCTCTGTGGGTTGCAAACCTGACTAGTATCCAT

hide sequence


Protein RefSeqs	XP_001928491	(Get FASTA)	NCBI Sequence Viewer
	XP_013852254	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000006716
	ENSSSCP00000006716.2
	ENSSSCP00015029027.1
	ENSSSCP00025025000.1
	ENSSSCP00035006693.1
	ENSSSCP00045007938.1
	ENSSSCP00055026162.1
	ENSSSCP00070035893.1

RefSeq Acc Id:	XP_013852254 ⟸ XM_013996800
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D0IKI5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFPVLKISVTGLDPNAMYSLLLDFVPTDSHRWKYINGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKVKLTNKLNGGGQIMLNSLHKYEPQVHIVRVGGAHRMVMNCSFPETQFIAVTAY QNEEITALKIKYNPFAKAFLDAKERNHLKDVPEAISESQHVAYSHLGGWILSNSDGMCTAGNGNYQYATPLPLSAPHTHHGCEHYPGLRGHHRQAPYPSAYMHRNHSPSVNLIESSSNNLQVFSGADS WTSLSSTPHASILSVPHTSGPINPGPSPYPCLWTISNSGGGPAGSGPEVHTSSPGAFLLGNPAVTSSLSTQAPTSAGVEVLGEPSLTSIAVSTWTAVASHPFSGWGSPGGCGRHSPSSLDS hide sequence

RefSeq Acc Id:	XP_001928491 ⟸ XM_001928456
- Peptide Label:	isoform X1
- UniProtKB:	F1RPV3 (UniProtKB/TrEMBL), A0A4X1V536 (UniProtKB/TrEMBL), A0A8D0IKI5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAMSELGTPKTSDGTVSRLLNVVESELQAGREKGDPTEKQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTGLDPNAMYSLLLDFVPTDSHRWKYINGEWVPAGKPEVSSHSCVYIHPDS PNFGAHWMKAPISFSKVKLTNKLNGGGQIMLNSLHKYEPQVHIVRVGGAHRMVMNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNHLKDVPEAISESQHVAYSHLGGWILSNSDGMCT AGNGNYQYATPLPLSAPHTHHGCEHYPGLRGHHRQAPYPSAYMHRNHSPSVNLIESSSNNLQVFSGADSWTSLSSTPHASILSVPHTSGPINPGPSPYPCLWTISNSGGGPAGSGPEVHTSSPGAFLL GNPAVTSSLSTQAPTSAGVEVLGEPSLTSIAVSTWTAVASHPFSGWGSPGGCGRHSPSSLDS hide sequence

Ensembl Acc Id:

ENSSSCP00000006716 ⟸ ENSSSCT00000006904

Protein Domains

T-box

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000006299	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015054344	UniProtKB/TrEMBL
	ENSSSCG00025043495	UniProtKB/TrEMBL
	ENSSSCG00035014949	UniProtKB/TrEMBL
	ENSSSCG00045007052	UniProtKB/TrEMBL
	ENSSSCG00055016650	UniProtKB/TrEMBL
	ENSSSCG00070021449	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000006904	ENTREZGENE
	ENSSSCT00000006904.3	UniProtKB/TrEMBL
	ENSSSCT00015072368.1	UniProtKB/TrEMBL
	ENSSSCT00025058970.1	UniProtKB/TrEMBL
	ENSSSCT00035018985.1	UniProtKB/TrEMBL
	ENSSSCT00045011690.1	UniProtKB/TrEMBL
	ENSSSCT00055032842.1	UniProtKB/TrEMBL
	ENSSSCT00070042674.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.820	UniProtKB/TrEMBL
InterPro	p53-like_TF_DNA-bd	UniProtKB/TrEMBL
	T-box_DNA-bd	UniProtKB/TrEMBL
	T-box_sf	UniProtKB/TrEMBL
	TF_Brachyury	UniProtKB/TrEMBL
	TF_T-box	UniProtKB/TrEMBL
	TF_T-box_CS	UniProtKB/TrEMBL
KEGG Report	ssc:100151956	UniProtKB/TrEMBL
NCBI Gene	TBX19	ENTREZGENE
PANTHER	PTHR11267	UniProtKB/TrEMBL
	T-BOX TRANSCRIPTION FACTOR TBX19	UniProtKB/TrEMBL
Pfam	T-box	UniProtKB/TrEMBL
PRINTS	BRACHYURY	UniProtKB/TrEMBL
	TBOX	UniProtKB/TrEMBL
PROSITE	TBOX_1	UniProtKB/TrEMBL
	TBOX_2	UniProtKB/TrEMBL
	TBOX_3	UniProtKB/TrEMBL
SMART	TBOX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49417	UniProtKB/TrEMBL
UniProt	A0A4X1V536	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0IKI5	ENTREZGENE, UniProtKB/TrEMBL
	F1RPV3	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:93797	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-06-11	TBX19	T-box transcription factor 19	TBX19	T-box 19	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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