KIAA0513 (KIAA0513) - Rat Genome Database

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Gene: KIAA0513 (KIAA0513) Sus scrofa
Analyze
Symbol: KIAA0513
Name: KIAA0513
RGD ID: 14067335
Description: ASSOCIATED WITH persistent fetal circulation syndrome (ortholog); schizophrenia (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: KIAA0513 ortholog; uncharacterized protein KIAA0513 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl63,724,785 - 3,779,924 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.163,724,784 - 3,786,285 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.264,158,815 - 4,206,363 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
KIAA0513
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl63,724,785 - 3,779,924 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.163,724,784 - 3,786,285 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.264,158,815 - 4,206,363 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA0513
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381685,027,795 - 85,094,230 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1685,027,782 - 85,094,230 (+)EnsemblGRCh38hg38GRCh38
GRCh371685,061,401 - 85,127,836 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361683,618,911 - 83,685,337 (+)NCBINCBI36Build 36hg18NCBI36
Celera1669,363,621 - 69,430,043 (+)NCBICelera
Cytogenetic Map16q24.1NCBI
HuRef1670,814,038 - 70,880,098 (+)NCBIHuRef
CHM1_11686,472,945 - 86,539,364 (+)NCBICHM1_1
T2T-CHM13v2.01691,094,420 - 91,160,858 (+)NCBIT2T-CHM13v2.0
6430548M08Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398120,840,891 - 120,892,046 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8120,840,891 - 120,892,045 (+)EnsemblGRCm39 Ensembl
GRCm388120,114,152 - 120,165,307 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8120,114,152 - 120,165,306 (+)EnsemblGRCm38mm10GRCm38
MGSCv378122,638,052 - 122,689,207 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368123,031,206 - 123,049,395 (+)NCBIMGSCv36mm8
Celera8124,334,610 - 124,385,877 (+)NCBICelera
Cytogenetic Map8E1NCBI
cM Map868.99NCBI
6430548M08Rikl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81965,076,626 - 65,125,185 (+)NCBIGRCr8
mRatBN7.21948,168,651 - 48,216,571 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1948,198,209 - 48,216,575 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1954,992,553 - 55,009,060 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01955,673,287 - 55,689,794 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01957,886,787 - 57,903,300 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01952,763,352 - 53,742,184 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1953,723,822 - 53,740,329 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01964,452,679 - 64,471,041 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41950,465,554 - 50,482,061 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11950,441,370 - 50,488,797 (+)NCBI
Celera1947,454,287 - 47,470,794 (+)NCBICelera
Cytogenetic Map19q12NCBI
Kiaa0513
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955541437,061 - 476,122 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955541437,106 - 476,131 (+)NCBIChiLan1.0ChiLan1.0
KIAA0513
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21894,780,103 - 94,846,352 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan116100,697,192 - 100,763,520 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01665,697,578 - 65,763,822 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11685,035,898 - 85,102,525 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1685,035,898 - 85,096,623 (+)Ensemblpanpan1.1panPan2
KIAA0513
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1567,481,098 - 67,544,078 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl567,474,507 - 67,544,681 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha567,496,910 - 67,557,706 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0567,714,799 - 67,775,618 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl567,709,410 - 67,775,611 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1567,730,790 - 67,791,582 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0567,565,267 - 67,625,996 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0567,980,043 - 68,040,853 (-)NCBIUU_Cfam_GSD_1.0
Kiaa0513
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934927,360,087 - 27,413,488 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366413,113,634 - 3,132,062 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366413,113,634 - 3,167,019 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA0513
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1570,438,139 - 70,502,918 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl570,438,150 - 70,499,848 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660475,241,257 - 5,306,169 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiaa0513
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247461,751,381 - 1,798,050 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247461,751,451 - 1,797,526 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in KIAA0513
3044 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000002957   ⟹   ENSSSCP00000002878
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl63,729,587 - 3,779,924 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000040743   ⟹   ENSSSCP00000034869
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl63,726,753 - 3,779,924 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000044016   ⟹   ENSSSCP00000037382
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl63,724,785 - 3,774,934 (-)Ensembl
RefSeq Acc Id: XM_005664311   ⟹   XP_005664368
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.163,724,784 - 3,774,959 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013998146   ⟹   XP_013853600
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.163,726,752 - 3,774,990 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021093717   ⟹   XP_020949376
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.163,726,752 - 3,786,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021093718   ⟹   XP_020949377
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.163,726,752 - 3,786,285 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021093719   ⟹   XP_020949378
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.163,726,752 - 3,786,284 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021093720   ⟹   XP_020949379
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.163,726,752 - 3,758,690 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021093721   ⟹   XP_020949380
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.163,726,721 - 3,774,979 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005664368   ⟸   XM_005664311
- Peptide Label: isoform X1
- UniProtKB: A0A287A0F9 (UniProtKB/TrEMBL),   A0A4X1T702 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020949380   ⟸   XM_021093721
- Peptide Label: isoform X2
- UniProtKB: F1S5W4 (UniProtKB/TrEMBL),   A0A4X1T4I0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020949377   ⟸   XM_021093718
- Peptide Label: isoform X1
- UniProtKB: A0A287A0F9 (UniProtKB/TrEMBL),   A0A4X1T702 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020949378   ⟸   XM_021093719
- Peptide Label: isoform X1
- UniProtKB: A0A287A0F9 (UniProtKB/TrEMBL),   A0A4X1T702 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020949376   ⟸   XM_021093717
- Peptide Label: isoform X1
- UniProtKB: A0A287A0F9 (UniProtKB/TrEMBL),   A0A4X1T702 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013853600   ⟸   XM_013998146
- Peptide Label: isoform X1
- UniProtKB: A0A287A0F9 (UniProtKB/TrEMBL),   A0A4X1T702 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020949379   ⟸   XM_021093720
- Peptide Label: isoform X1
- UniProtKB: A0A287A0F9 (UniProtKB/TrEMBL),   A0A4X1T702 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000034869   ⟸   ENSSSCT00000040743
Ensembl Acc Id: ENSSSCP00000037382   ⟸   ENSSSCT00000044016
Ensembl Acc Id: ENSSSCP00000002878   ⟸   ENSSSCT00000002957
Protein Domains
SBF1/SBF2


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000002666 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015073072 UniProtKB/TrEMBL
  ENSSSCG00030064845 UniProtKB/TrEMBL
  ENSSSCG00035047945 UniProtKB/TrEMBL
  ENSSSCG00045030901 UniProtKB/TrEMBL
  ENSSSCG00050027678 UniProtKB/TrEMBL
  ENSSSCG00055013640 UniProtKB/TrEMBL
  ENSSSCG00060038614 UniProtKB/TrEMBL
  ENSSSCG00070006692 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000002957 ENTREZGENE
  ENSSSCT00000002957.5 UniProtKB/TrEMBL
  ENSSSCT00000040743.3 UniProtKB/TrEMBL
  ENSSSCT00000044016 ENTREZGENE
  ENSSSCT00000044016.3 UniProtKB/TrEMBL
  ENSSSCT00015098202.1 UniProtKB/TrEMBL
  ENSSSCT00015098335.1 UniProtKB/TrEMBL
  ENSSSCT00015098530.1 UniProtKB/TrEMBL
  ENSSSCT00030090690.1 UniProtKB/TrEMBL
  ENSSSCT00030090746.1 UniProtKB/TrEMBL
  ENSSSCT00030090790.1 UniProtKB/TrEMBL
  ENSSSCT00035063870.1 UniProtKB/TrEMBL
  ENSSSCT00035063877.1 UniProtKB/TrEMBL
  ENSSSCT00035063881.1 UniProtKB/TrEMBL
  ENSSSCT00045052765.1 UniProtKB/TrEMBL
  ENSSSCT00045052923.1 UniProtKB/TrEMBL
  ENSSSCT00045053083.1 UniProtKB/TrEMBL
  ENSSSCT00050037256.1 UniProtKB/TrEMBL
  ENSSSCT00050037262.1 UniProtKB/TrEMBL
  ENSSSCT00055026952.1 UniProtKB/TrEMBL
  ENSSSCT00055027030.1 UniProtKB/TrEMBL
  ENSSSCT00055027110.1 UniProtKB/TrEMBL
  ENSSSCT00060052208.1 UniProtKB/TrEMBL
  ENSSSCT00070013000.1 UniProtKB/TrEMBL
  ENSSSCT00070013013.1 UniProtKB/TrEMBL
  ENSSSCT00070013017.1 UniProtKB/TrEMBL
  ENSSSCT00070013027.1 UniProtKB/TrEMBL
InterPro KIAA0513 UniProtKB/TrEMBL
  SBF1/SBF2 UniProtKB/TrEMBL
KEGG Report ssc:100515140 UniProtKB/TrEMBL
NCBI Gene KIAA0513 ENTREZGENE
PANTHER PTHR13663 UniProtKB/TrEMBL
  SIMILAR TO RIKEN CDNA 6430548M08 UniProtKB/TrEMBL
Pfam SBF2 UniProtKB/TrEMBL
UniProt A0A286ZTU4_PIG UniProtKB/TrEMBL
  A0A287A0F9 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1T4I0 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1T4I9_PIG UniProtKB/TrEMBL
  A0A4X1T702 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0UBS9_PIG UniProtKB/TrEMBL
  A0A8D0ZYN3_PIG UniProtKB/TrEMBL
  A0A8D1CWM6_PIG UniProtKB/TrEMBL
  A0A8D1U286_PIG UniProtKB/TrEMBL
  F1S5W4 ENTREZGENE, UniProtKB/TrEMBL
  M3VH69_PIG UniProtKB/TrEMBL
VGNC ID VGNC:89433 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-04 KIAA0513  KIAA0513  KIAA0513  KIAA0513 ortholog  Symbol and/or name change 5135510 APPROVED