6430548M08Rik (RIKEN cDNA 6430548M08 gene) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: 6430548M08Rik (RIKEN cDNA 6430548M08 gene) Mus musculus
Analyze
Symbol: 6430548M08Rik
Name: RIKEN cDNA 6430548M08 gene
RGD ID: 1312580
MGI Page MGI
Description: Is expressed in forebrain. Orthologous to human KIAA0513 (KIAA0513).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AW049007; hypothetical protein LOC234797; Kiaa0513; mKIAA0513; uncharacterized protein KIAA0513
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398120,840,891 - 120,892,046 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8120,840,891 - 120,892,045 (+)EnsemblGRCm39 Ensembl
GRCm388120,114,152 - 120,165,307 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8120,114,152 - 120,165,306 (+)EnsemblGRCm38mm10GRCm38
MGSCv378122,638,052 - 122,689,207 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368123,031,206 - 123,049,395 (+)NCBIMGSCv36mm8
Celera8124,334,610 - 124,385,877 (+)NCBICelera
Cytogenetic Map8E1NCBI
cM Map868.99NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
6430548M08RikMousepersistent fetal circulation syndrome  ISORGD:13518898554872ClinVar Annotator: match by term: Congenital alveolar capillary dysplasiaClinVar 
6430548M08RikMouseschizophrenia  ISORGD:13518898554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106|PMID:30208311

1 to 20 of 61 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
6430548M08RikMouse2,2',4,4'-Tetrabromodiphenyl ether affects expressionEXP 64804642,2',4,4'-tetrabromodiphenyl ether affects the expression of KIAA0513 mRNACTDPMID:30294300
6430548M08RikMouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:13048846480464Tetrachlorodibenzodioxin results in increased expression of 6430548M08RIKL mRNACTDPMID:33387578
6430548M08RikMouse2-hydroxypropanoic acid decreases expressionISORGD:13518896480464Lactic Acid results in decreased expression of KIAA0513 mRNACTDPMID:30851411
6430548M08RikMouse2-palmitoylglycerol increases expressionISORGD:135188964804642-palmitoylglycerol results in increased expression of KIAA0513 mRNACTDPMID:37199045
6430548M08RikMouse6-propyl-2-thiouracil decreases expressionISORGD:13048846480464Propylthiouracil results in decreased expression of 6430548M08RIKL mRNACTDPMID:24780913
6430548M08RikMouseacetamide increases expressionISORGD:13048846480464acetamide results in increased expression of 6430548M08RIKL mRNACTDPMID:31881176
6430548M08RikMouseacrylamide increases expressionISORGD:13048846480464Acrylamide results in increased expression of 6430548M08RIKL mRNACTDPMID:28959563
6430548M08RikMouseaflatoxin B1 decreases methylationISORGD:13518896480464Aflatoxin B1 results in decreased methylation of KIAA0513 intronCTDPMID:30157460
6430548M08RikMouseall-trans-retinoic acid increases expressionISORGD:13518896480464Tretinoin results in increased expression of KIAA0513 mRNACTDPMID:23830798|PMID:33167477
6430548M08RikMousearsane multiple interactionsISORGD:13518896480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
6430548M08RikMousearsenic atom multiple interactionsISORGD:13518896480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased more ...CTDPMID:39836092
6430548M08RikMouseatrazine increases expressionISORGD:13048846480464Atrazine results in increased expression of 6430548M08RIKL mRNACTDPMID:36841081
6430548M08RikMouseatrazine affects methylationISORGD:13048846480464Atrazine affects the methylation of 6430548M08RIKL geneCTDPMID:35440735
6430548M08RikMousebenzo[a]pyrene affects methylationISORGD:13518896480464Benzo(a)pyrene affects the methylation of KIAA0513 3' UTR; Benzo(a)pyrene affects the methylation of KIAA0513 5' more ...CTDPMID:27901495
6430548M08RikMousebenzo[a]pyrene decreases methylationISORGD:13518896480464Benzo(a)pyrene results in decreased methylation of KIAA0513 promoterCTDPMID:27901495
6430548M08RikMousebisphenol A decreases expressionISORGD:13048846480464bisphenol A results in decreased expression of 6430548M08RIKL mRNA; bisphenol A results in decreased expression more ...CTDPMID:25181051|PMID:30816183|PMID:32528016|PMID:34947998
6430548M08RikMousebisphenol A increases expressionISORGD:13518896480464bisphenol A results in increased expression of KIAA0513 mRNACTDPMID:27685785|PMID:29275510
6430548M08RikMouseBrodifacoum increases expressionISORGD:13048846480464bromfenacoum results in increased expression of 6430548M08RIKL proteinCTDPMID:28903499
6430548M08RikMousecadmium dichloride decreases expressionISORGD:13048846480464Cadmium Chloride results in decreased expression of 6430548M08RIKL mRNACTDPMID:33453195
6430548M08RikMousecalcitriol increases expressionISORGD:13518896480464Calcitriol results in increased expression of KIAA0513 mRNACTDPMID:21592394

1 to 20 of 61 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
6430548M08RikMousebiological_process involved_inND 2290270 MGIGO_REF:0000015

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
6430548M08RikMousecellular_component is_active_inND 2290270 MGIGO_REF:0000015

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
6430548M08RikMousemolecular_function enablesND 2290270 MGIGO_REF:0000015


#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12693553   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:20436479   PMID:21677750   PMID:32325033   PMID:32554809   PMID:33005179   PMID:34321999   PMID:36417873   PMID:38355793  



6430548M08Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398120,840,891 - 120,892,046 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8120,840,891 - 120,892,045 (+)EnsemblGRCm39 Ensembl
GRCm388120,114,152 - 120,165,307 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8120,114,152 - 120,165,306 (+)EnsemblGRCm38mm10GRCm38
MGSCv378122,638,052 - 122,689,207 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368123,031,206 - 123,049,395 (+)NCBIMGSCv36mm8
Celera8124,334,610 - 124,385,877 (+)NCBICelera
Cytogenetic Map8E1NCBI
cM Map868.99NCBI
KIAA0513
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381685,027,795 - 85,094,230 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1685,027,782 - 85,094,230 (+)EnsemblGRCh38hg38GRCh38
GRCh371685,061,401 - 85,127,836 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361683,618,911 - 83,685,337 (+)NCBINCBI36Build 36hg18NCBI36
Celera1669,363,621 - 69,430,043 (+)NCBICelera
Cytogenetic Map16q24.1NCBI
HuRef1670,814,038 - 70,880,098 (+)NCBIHuRef
CHM1_11686,472,945 - 86,539,364 (+)NCBICHM1_1
T2T-CHM13v2.01691,094,420 - 91,160,858 (+)NCBIT2T-CHM13v2.0
6430548M08Rikl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81965,076,626 - 65,125,185 (+)NCBIGRCr8
mRatBN7.21948,168,651 - 48,216,571 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1948,198,209 - 48,216,575 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1954,992,553 - 55,009,060 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01955,673,287 - 55,689,794 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01957,886,787 - 57,903,300 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01952,763,352 - 53,742,184 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1953,723,822 - 53,740,329 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01964,452,679 - 64,471,041 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41950,465,554 - 50,482,061 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11950,441,370 - 50,488,797 (+)NCBI
Celera1947,454,287 - 47,470,794 (+)NCBICelera
Cytogenetic Map19q12NCBI
Kiaa0513
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955541437,061 - 476,122 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955541437,106 - 476,131 (+)NCBIChiLan1.0ChiLan1.0
KIAA0513
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21894,780,103 - 94,846,352 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan116100,697,192 - 100,763,520 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01665,697,578 - 65,763,822 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11685,035,898 - 85,102,525 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1685,035,898 - 85,096,623 (+)Ensemblpanpan1.1panPan2
KIAA0513
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1567,481,098 - 67,544,078 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl567,474,507 - 67,544,681 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha567,496,910 - 67,557,706 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0567,714,799 - 67,775,618 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl567,709,410 - 67,775,611 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1567,730,790 - 67,791,582 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0567,565,267 - 67,625,996 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0567,980,043 - 68,040,853 (-)NCBIUU_Cfam_GSD_1.0
Kiaa0513
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934927,360,087 - 27,413,488 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366413,113,634 - 3,132,062 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366413,113,634 - 3,167,019 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA0513
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl63,724,785 - 3,779,924 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.163,724,784 - 3,786,285 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.264,158,815 - 4,206,363 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA0513
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1570,438,139 - 70,502,918 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl570,438,150 - 70,499,848 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660475,241,257 - 5,306,169 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kiaa0513
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247461,751,381 - 1,798,050 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247461,751,451 - 1,797,526 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in 6430548M08Rik
3828 total Variants

Predicted Target Of
Summary Value
Count of predictions:5179
Count of miRNA genes:839
Interacting mature miRNAs:1134
Transcripts:ENSMUST00000034281, ENSMUST00000108948, ENSMUST00000108950, ENSMUST00000108951, ENSMUST00000132229, ENSMUST00000144682, ENSMUST00000153725
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 21 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357494Obsty2_mobesity 2 (mouse)Not determined896245241129745061Mouse
4141435Fbtq3_mfemoral bone trait QTL 3 (mouse)Not determined8100965309130127694Mouse
12904960Gmmq6_mgastrocnemius muscle mass QTL 6 (mouse)8111481497130127694Mouse
11252141Fdr2_mfat response to dietary restriction 2 (mouse)898390634130127694Mouse
1302105Im1_mImmunoregulatory 1 (mouse)Not determined899828531130127694Mouse
12880431Fgf23lq2_mFGF23 serum level QTL 2 (mouse)897626632130127694Mouse
1301080Sluc9_msusceptibility to lung cancer 9 (mouse)Not determined899828531130127694Mouse
10412274Leci1_mleukocyte endothelial cell interactions 1 (mouse)Not determined8110415083130127694Mouse
26884375Skwq2_mskull length QTL 2, 5 week (mouse)8120726739130027694Mouse
12904938Edlmmq7_mextensor digitorum longus muscle mass QTL 7 (mouse)8111481497130127694Mouse

1 to 10 of 21 rows
AW049007  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388120,165,099 - 120,165,225UniSTSGRCm38
MGSCv378122,688,999 - 122,689,125UniSTSGRCm37
Celera8124,385,669 - 124,385,795UniSTS
Cytogenetic Map8E1UniSTS
Whitehead/MRC_RH81412.48UniSTS
D8Mit201  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388120,140,019 - 120,140,162UniSTSGRCm38
MGSCv378122,663,919 - 122,664,062UniSTSGRCm37
Celera8124,360,588 - 124,360,731UniSTS
Cytogenetic Map8E1UniSTS
cM Map866.0UniSTS
Whitehead Genetic867.8UniSTS
Whitehead/MRC_RH81411.59UniSTS
UniSTS:236025  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388120,161,708 - 120,162,046UniSTSGRCm38
MGSCv378122,685,608 - 122,685,946UniSTSGRCm37
Celera8124,382,278 - 124,382,616UniSTS
Cytogenetic Map8E1UniSTS
AI600036  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388120,164,975 - 120,165,190UniSTSGRCm38
MGSCv378122,688,875 - 122,689,090UniSTSGRCm37
Celera8124,385,545 - 124,385,760UniSTS
Cytogenetic Map8E1UniSTS






1 to 16 of 16 rows
RefSeq Transcripts NM_001163760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_172286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC163442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ293122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 16 of 16 rows

Ensembl Acc Id: ENSMUST00000034281   ⟹   ENSMUSP00000034281
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,840,891 - 120,892,045 (+)Ensembl
GRCm38.p6 Ensembl8120,114,152 - 120,165,306 (+)Ensembl
Ensembl Acc Id: ENSMUST00000108948   ⟹   ENSMUSP00000104576
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,840,891 - 120,881,313 (+)Ensembl
GRCm38.p6 Ensembl8120,114,152 - 120,154,574 (+)Ensembl
Ensembl Acc Id: ENSMUST00000108950   ⟹   ENSMUSP00000104578
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,871,668 - 120,889,627 (+)Ensembl
GRCm38.p6 Ensembl8120,144,929 - 120,162,888 (+)Ensembl
Ensembl Acc Id: ENSMUST00000108951   ⟹   ENSMUSP00000104579
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,840,892 - 120,892,043 (+)Ensembl
GRCm38.p6 Ensembl8120,114,153 - 120,165,304 (+)Ensembl
Ensembl Acc Id: ENSMUST00000132229   ⟹   ENSMUSP00000117269
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,871,202 - 120,872,257 (+)Ensembl
GRCm38.p6 Ensembl8120,144,463 - 120,145,518 (+)Ensembl
Ensembl Acc Id: ENSMUST00000144682
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,882,603 - 120,888,125 (+)Ensembl
GRCm38.p6 Ensembl8120,155,864 - 120,161,386 (+)Ensembl
Ensembl Acc Id: ENSMUST00000153725   ⟹   ENSMUSP00000114976
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,871,443 - 120,879,284 (+)Ensembl
GRCm38.p6 Ensembl8120,144,704 - 120,152,545 (+)Ensembl
Ensembl Acc Id: ENSMUST00000212268
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,890,933 - 120,892,045 (+)Ensembl
GRCm38.p6 Ensembl8120,164,194 - 120,165,306 (+)Ensembl
Ensembl Acc Id: ENSMUST00000212474
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8120,840,891 - 120,881,313 (+)Ensembl
GRCm38.p6 Ensembl8120,114,152 - 120,154,574 (+)Ensembl
RefSeq Acc Id: NM_001163760   ⟹   NP_001157232
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398120,871,668 - 120,892,046 (+)NCBI
GRCm388120,144,929 - 120,165,307 (+)NCBI
MGSCv378122,638,052 - 122,689,207 (+)RGD
Celera8124,334,610 - 124,385,877 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163761   ⟹   NP_001157233
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398120,840,891 - 120,892,046 (+)NCBI
GRCm388120,114,152 - 120,165,307 (+)ENTREZGENE
MGSCv378122,638,052 - 122,689,207 (+)RGD
Celera8124,334,610 - 124,385,877 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163762   ⟹   NP_001157234
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398120,840,891 - 120,881,313 (+)NCBI
GRCm388120,114,152 - 120,154,574 (+)NCBI
MGSCv378122,638,052 - 122,689,207 (+)RGD
Celera8124,334,610 - 124,385,877 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_172286   ⟹   NP_758490
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398120,840,891 - 120,892,046 (+)NCBI
GRCm388120,114,152 - 120,165,307 (+)ENTREZGENE
MGSCv378122,638,052 - 122,689,207 (+)RGD
Celera8124,334,610 - 124,385,877 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530934   ⟹   XP_006530997
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398120,871,427 - 120,892,045 (+)NCBI
GRCm388120,144,710 - 120,165,306 (+)NCBI
Sequence:
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: NP_758490   ⟸   NM_172286
- Peptide Label: isoform a
- UniProtKB: Q8C8N9 (UniProtKB/Swiss-Prot),   Q8BQV3 (UniProtKB/Swiss-Prot),   Q80TY8 (UniProtKB/Swiss-Prot),   Q8CCN0 (UniProtKB/Swiss-Prot),   Q8R0A7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001157233   ⟸   NM_001163761
- Peptide Label: isoform b
- UniProtKB: Q3TA40 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157234   ⟸   NM_001163762
- Peptide Label: isoform c
- UniProtKB: Q8BQB5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001157232   ⟸   NM_001163760
- Peptide Label: isoform a
- UniProtKB: Q8C8N9 (UniProtKB/Swiss-Prot),   Q8BQV3 (UniProtKB/Swiss-Prot),   Q80TY8 (UniProtKB/Swiss-Prot),   Q8CCN0 (UniProtKB/Swiss-Prot),   Q8R0A7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006530997   ⟸   XM_006530934
- Peptide Label: isoform X1
- UniProtKB: Q8C8N9 (UniProtKB/Swiss-Prot),   Q8BQV3 (UniProtKB/Swiss-Prot),   Q80TY8 (UniProtKB/Swiss-Prot),   Q8CCN0 (UniProtKB/Swiss-Prot),   Q8R0A7 (UniProtKB/Swiss-Prot)
- Sequence:
SBF1/SBF2

Name Modeler Protein Id AA Range Protein Structure
AF-Q8R0A7-F1-model_v2 AlphaFold Q8R0A7 1-407 view protein structure

RGD ID:8668451
Promoter ID:EPDNEW_M12256
Type:multiple initiation site
Name:6430548M08Rik_1
Description:Mus musculus RIKEN cDNA 6430548M08 gene , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm388120,114,152 - 120,114,212EPDNEW
RGD ID:6842562
Promoter ID:MM_KWN:55933
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:NM_001163760,   OTTMUST00000056914,   OTTMUST00000056915,   UC009NQW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv368122,667,676 - 122,669,072 (+)MPROMDB


1 to 30 of 30 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000031824 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000034281 ENTREZGENE
  ENSMUST00000034281.13 UniProtKB/Swiss-Prot
  ENSMUST00000108948 ENTREZGENE
  ENSMUST00000108950 ENTREZGENE
  ENSMUST00000108950.2 UniProtKB/Swiss-Prot
  ENSMUST00000108951 ENTREZGENE
InterPro KIAA0513 UniProtKB/Swiss-Prot
  SBF1/SBF2 UniProtKB/Swiss-Prot
KEGG Report mmu:234797 UniProtKB/Swiss-Prot
MGD MGI:2443793 ENTREZGENE
NCBI Gene 234797 ENTREZGENE
PANTHER PTHR13663 UniProtKB/Swiss-Prot
  SIMILAR TO RIKEN CDNA 6430548M08 UniProtKB/Swiss-Prot
Pfam SBF2 UniProtKB/Swiss-Prot
PhenoGen 6430548M08Rik PhenoGen
UniProt D3YUS2_MOUSE UniProtKB/TrEMBL
  D3Z5E4_MOUSE UniProtKB/TrEMBL
  K0513_MOUSE UniProtKB/Swiss-Prot
  Q3TA40 ENTREZGENE, UniProtKB/TrEMBL
  Q80TY8 ENTREZGENE
  Q8BQB5 ENTREZGENE, UniProtKB/TrEMBL
  Q8BQV3 ENTREZGENE
  Q8C8N9 ENTREZGENE
  Q8CCN0 ENTREZGENE
  Q8R0A7 ENTREZGENE
UniProt Secondary Q80TY8 UniProtKB/Swiss-Prot
  Q8BQV3 UniProtKB/Swiss-Prot
  Q8C8N9 UniProtKB/Swiss-Prot
  Q8CCN0 UniProtKB/Swiss-Prot
1 to 30 of 30 rows