AKAP8L (A-kinase anchoring protein 8 like) - Rat Genome Database

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Gene: AKAP8L (A-kinase anchoring protein 8 like) Sus scrofa
Analyze
Symbol: AKAP8L
Name: A-kinase anchoring protein 8 like
RGD ID: 14060036
Description: ENCODES a protein that exhibits DNA binding (inferred); histone deacetylase binding (inferred); kinase activity (inferred); INVOLVED IN cell cycle G2/M phase transition (inferred); mitotic chromosome condensation (inferred); mRNA processing (inferred); FOUND IN chromatin (inferred); cytoplasm (inferred); nuclear matrix (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: a-kinase anchor protein 8-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl262,184,763 - 62,221,935 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1262,184,735 - 62,241,631 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2261,760,062 - 61,797,260 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AKAP8LPigdeoxynivalenol increases expressionEXP 6480464deoxynivalenol results in increased expression of AKAP8L mRNACTDPMID:35307453


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AKAP8LPigcell cycle G2/M phase transition involved_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPigmitotic chromosome condensation involved_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPigmRNA processing involved_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPignuclear membrane disassembly involved_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPigpositive regulation of transcription by RNA polymerase II involved_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPigregulation of mRNA export from nucleus involved_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107

Cellular Component
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
AKAP8LPigchromatin located_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPigcytoplasm located_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPignuclear matrix is_active_inIBAMGI:1860606 more ...150520179 GO_CentralGO_REF:0000033
AKAP8LPignuclear matrix located_inIEAUniProtKB-SubCell:SL-0181150520179 UniProtGO_REF:0000044
AKAP8LPignuclear matrix located_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPignuclear speck located_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPignucleus is_active_inIBAMGI:1860606 more ...150520179 GO_CentralGO_REF:0000033
AKAP8LPignucleus located_inIEAInterPro:IPR007071150520179 InterProGO_REF:0000002
AKAP8LPignucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
AKAP8LPignucleus located_inIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
AKAP8LPigribonucleoprotein complex part_ofIEAUniProtKB:Q9ULX6 and ensembl:ENSP00000380557150520179 EnsemblGO_REF:0000107
1 to 11 of 11 rows

Molecular Function
1 to 14 of 14 rows

  
1 to 14 of 14 rows

PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  



AKAP8L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl262,184,763 - 62,221,935 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1262,184,735 - 62,241,631 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2261,760,062 - 61,797,260 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AKAP8L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381915,380,050 - 15,418,988 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1915,380,050 - 15,419,141 (-)EnsemblGRCh38hg38GRCh38
GRCh371915,490,861 - 15,529,799 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361915,351,859 - 15,390,833 (-)NCBINCBI36Build 36hg18NCBI36
Build 341915,351,858 - 15,390,833NCBI
Celera1915,386,496 - 15,425,477 (-)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1915,058,829 - 15,097,763 (-)NCBIHuRef
CHM1_11915,490,499 - 15,529,470 (-)NCBICHM1_1
T2T-CHM13v2.01915,505,027 - 15,543,979 (-)NCBIT2T-CHM13v2.0
Akap8l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391732,540,398 - 32,569,589 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1732,540,398 - 32,569,581 (-)EnsemblGRCm39 Ensembl
GRCm381732,321,424 - 32,350,616 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1732,321,424 - 32,350,607 (-)EnsemblGRCm38mm10GRCm38
MGSCv371732,458,369 - 32,487,522 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361732,053,032 - 32,082,199 (-)NCBIMGSCv36mm8
Celera1733,242,263 - 33,271,406 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.5NCBI
Akap8l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8711,983,215 - 12,012,843 (-)NCBIGRCr8
mRatBN7.2711,332,671 - 11,362,287 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl711,332,672 - 11,362,275 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx714,151,159 - 14,180,750 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0716,028,581 - 16,058,168 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0713,900,096 - 13,929,674 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0714,340,168 - 14,369,835 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl714,340,170 - 14,369,821 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0714,494,264 - 14,524,003 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4712,889,649 - 12,919,236 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1712,889,649 - 12,919,236 (-)NCBI
Celera79,443,795 - 9,473,308 (-)NCBICelera
Cytogenetic Map7q11NCBI
Akap8l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554957,839,339 - 7,874,432 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554957,839,339 - 7,874,432 (+)NCBIChiLan1.0ChiLan1.0
AKAP8L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22020,293,841 - 20,332,210 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11919,296,597 - 19,334,983 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,912,960 - 14,950,479 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11915,897,896 - 15,936,684 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1915,897,969 - 15,936,486 (-)Ensemblpanpan1.1panPan2
AKAP8L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12046,773,585 - 46,800,544 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2046,747,062 - 46,817,240 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2046,621,143 - 46,648,110 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02047,260,225 - 47,287,202 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2047,232,152 - 47,287,197 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12046,495,088 - 46,522,051 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02046,911,738 - 46,938,694 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02047,185,246 - 47,212,220 (+)NCBIUU_Cfam_GSD_1.0
Akap8l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118205,539,079 - 205,574,596 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365965,088,361 - 5,123,649 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365965,088,260 - 5,123,735 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKAP8L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1613,987,731 - 14,023,130 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl613,987,736 - 14,023,148 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660745,484,922 - 5,520,168 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Akap8l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249012,472,029 - 2,508,129 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249012,471,957 - 2,508,248 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in AKAP8L
655 total Variants



alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3



Ensembl Acc Id: ENSSSCT00000015116   ⟹   ENSSSCP00000014711
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl262,190,755 - 62,221,935 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000058689   ⟹   ENSSSCP00000050170
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl262,184,763 - 62,221,929 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000077269   ⟹   ENSSSCP00000066716
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl262,189,987 - 62,221,935 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000080221   ⟹   ENSSSCP00000065536
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl262,184,797 - 62,216,238 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000088072   ⟹   ENSSSCP00000070279
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl262,155,437 - 62,221,929 (+)Ensembl
RefSeq Acc Id: XM_003123432   ⟹   XP_003123480
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1262,184,735 - 62,241,631 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005652898   ⟹   XP_005652955
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1262,184,735 - 62,241,631 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021083627   ⟹   XP_020939286
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1262,184,735 - 62,220,782 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021083628   ⟹   XP_020939287
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1262,184,735 - 62,220,782 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021083629   ⟹   XP_020939288
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1262,184,735 - 62,204,650 (+)NCBI
Sequence:
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: XP_003123480   ⟸   XM_003123432
- Peptide Label: isoform X1
- UniProtKB: A0A0B8RT94 (UniProtKB/TrEMBL),   A0A4X1VG59 (UniProtKB/TrEMBL),   A0A8D0XUM5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005652955   ⟸   XM_005652898
- Peptide Label: isoform X2
- UniProtKB: A0A480SCR1 (UniProtKB/TrEMBL),   A0A287B168 (UniProtKB/TrEMBL),   A0A480T358 (UniProtKB/TrEMBL),   A0A4X1VK63 (UniProtKB/TrEMBL),   A0A8D1JTZ6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020939287   ⟸   XM_021083628
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_020939286   ⟸   XM_021083627
- Peptide Label: isoform X3
- UniProtKB: A0A5G2QU62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020939288   ⟸   XM_021083629
- Peptide Label: isoform X4
- Sequence:
C2H2 AKAP95-type



1 to 40 of 74 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSSCG00000013838 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015023746 UniProtKB/TrEMBL
  ENSSSCG00025063690 UniProtKB/TrEMBL
  ENSSSCG00030062330 UniProtKB/TrEMBL
  ENSSSCG00035072351 UniProtKB/TrEMBL
  ENSSSCG00040039434 UniProtKB/TrEMBL
  ENSSSCG00045037492 UniProtKB/TrEMBL
  ENSSSCG00050011622 UniProtKB/TrEMBL
  ENSSSCG00055006788 UniProtKB/TrEMBL
  ENSSSCG00060063410 UniProtKB/TrEMBL
  ENSSSCG00065003035 UniProtKB/TrEMBL
  ENSSSCG00070025065 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000015116.5 UniProtKB/TrEMBL
  ENSSSCT00000058689 ENTREZGENE
  ENSSSCT00000058689.3 UniProtKB/TrEMBL
  ENSSSCT00000077269 ENTREZGENE
  ENSSSCT00000077269.2 UniProtKB/TrEMBL
  ENSSSCT00000080221 ENTREZGENE
  ENSSSCT00000080221.2 UniProtKB/TrEMBL
  ENSSSCT00015031474.1 UniProtKB/TrEMBL
  ENSSSCT00015031639.1 UniProtKB/TrEMBL
  ENSSSCT00015031731.1 UniProtKB/TrEMBL
  ENSSSCT00025087281.1 UniProtKB/TrEMBL
  ENSSSCT00025087659.1 UniProtKB/TrEMBL
  ENSSSCT00025087875.1 UniProtKB/TrEMBL
  ENSSSCT00030087195.1 UniProtKB/TrEMBL
  ENSSSCT00030087237.1 UniProtKB/TrEMBL
  ENSSSCT00030087249.1 UniProtKB/TrEMBL
  ENSSSCT00035097903.1 UniProtKB/TrEMBL
  ENSSSCT00035097910.1 UniProtKB/TrEMBL
  ENSSSCT00035097930.1 UniProtKB/TrEMBL
  ENSSSCT00040052964.1 UniProtKB/TrEMBL
  ENSSSCT00040053197.1 UniProtKB/TrEMBL
  ENSSSCT00045064701.1 UniProtKB/TrEMBL
  ENSSSCT00045064763.1 UniProtKB/TrEMBL
  ENSSSCT00045064796.1 UniProtKB/TrEMBL
  ENSSSCT00050015646.1 UniProtKB/TrEMBL
  ENSSSCT00050015673.1 UniProtKB/TrEMBL
  ENSSSCT00050015679.1 UniProtKB/TrEMBL
  ENSSSCT00055013281.1 UniProtKB/TrEMBL
1 to 40 of 74 rows