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Gene: TAF7 (TATA-box binding protein associated factor 7) Sus scrofa

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Symbol:

TAF7

Name:

TATA-box binding protein associated factor 7

RGD ID:

14028079

Description:

ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); negative regulation of protein kinase activity (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 31 (ortholog); familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

transcription initiation factor TFIID subunit 7

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	142,947,343 - 142,952,505 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	142,949,271 - 142,952,611 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	149,149,391 - 149,151,779 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant intellectual developmental disorder 31 (ISO)

familial adenomatous polyposis 1 (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription initiation (IEA)

estrogen receptor signaling pathway (IEA,ISO)

mRNA transcription by RNA polymerase II (IEA)

negative regulation of DNA-templated transcription (IEA)

negative regulation of MHC class I biosynthetic process (IEA)

negative regulation of MHC class II biosynthetic process (IEA)

negative regulation of protein kinase activity (ISO)

negative regulation of transcription by RNA polymerase II (IEA)

positive regulation of transcription by RNA polymerase II (IEA)

positive regulation of transcription initiation by RNA polymerase II (IEA)

regulation of transcription by RNA polymerase II (IBA,IEA,ISO)

RNA polymerase II preinitiation complex assembly (IBA,IEA)

transcription by RNA polymerase II (IEA,ISO)

transcription initiation at RNA polymerase II promoter (IEA)

translational initiation (IEA)

Cellular Component

cytoplasm (IEA)

male germ cell nucleus (IEA)

MLL1 complex (IEA)

nucleus (IEA,ISO)

transcription factor TFIID complex (IBA,IEA)

transcription factor TFTC complex (IEA)

transcription regulator complex (IEA)

Molecular Function

DNA-binding transcription factor binding (IEA)

histone acetyltransferase binding (IEA)

histone H3K27me3 reader activity (IEA,ISO)

nuclear thyroid hormone receptor binding (IEA)

nuclear vitamin D receptor binding (IEA)

P-TEFb complex binding (IEA)

protein binding (ISO)

protein heterodimerization activity (IEA)

RNA polymerase II general transcription initiation factor activity (IBA,IEA)

TFIIH-class transcription factor complex binding (IEA)

transcription cis-regulatory region binding (IEA)

translation initiation factor activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

RNA polymerase II transcription initiation pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

TAF7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	142,947,343 - 142,952,505 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	142,949,271 - 142,952,611 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	149,149,391 - 149,151,779 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TAF7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	141,318,490 - 141,320,784 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	141,259,884 - 141,320,784 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	140,698,057 - 140,700,351 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	140,678,241 - 140,680,535 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	140,678,241 - 140,680,535	NCBI
Celera	5	136,774,883 - 136,777,177 (-)	NCBI		Celera
Cytogenetic Map	5	q31.3	NCBI
HuRef	5	135,843,117 - 135,845,411 (-)	NCBI		HuRef
CHM1_1	5	140,131,262 - 140,133,556 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	141,843,793 - 141,846,087 (-)	NCBI		T2T-CHM13v2.0

Taf7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	37,773,544 - 37,777,257 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	37,773,544 - 37,777,257 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	37,640,491 - 37,644,204 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	37,640,491 - 37,644,204 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	37,800,145 - 37,803,858 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	37,766,876 - 37,772,457 (-)	NCBI		MGSCv36	mm8
Celera	18	38,972,979 - 38,976,692 (-)	NCBI		Celera
Cytogenetic Map	18	B3	NCBI
cM Map	18	19.54	NCBI

Taf7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	29,704,182 - 29,713,382 (-)	NCBI		GRCr8
mRatBN7.2	18	29,459,937 - 29,462,086 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	29,452,943 - 29,462,134 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	29,564,287 - 29,566,435 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	30,326,296 - 30,328,444 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	29,661,623 - 29,663,771 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	30,779,149 - 30,781,297 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	30,779,150 - 30,781,292 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	30,475,376 - 30,477,524 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	30,541,432 - 30,543,580 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	30,568,523 - 30,569,630 (-)	NCBI
Celera	18	29,106,903 - 29,109,051 (-)	NCBI		Celera
Cytogenetic Map	18	p11	NCBI

Taf7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	12,453,655 - 12,456,070 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	12,453,655 - 12,456,070 (+)	NCBI	ChiLan1.0	ChiLan1.0

TAF7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	136,568,526 - 136,570,950 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	134,708,078 - 134,710,551 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	136,680,554 - 136,682,862 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	142,794,156 - 142,796,442 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

TAF7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	36,295,387 - 36,297,681 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	36,295,911 - 36,296,960 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	33,347,329 - 33,349,652 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	36,749,118 - 36,751,441 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	36,749,126 - 36,751,457 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	33,824,087 - 33,826,410 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	34,635,069 - 34,637,392 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	35,442,754 - 35,445,077 (-)	NCBI		UU_Cfam_GSD_1.0

Taf7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	151,250,983 - 151,253,265 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936504	12,824,953 - 12,827,214 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936504	12,824,928 - 12,827,238 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TAF7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	43,938,202 - 43,940,486 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	43,938,714 - 43,939,763 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	33,913,731 - 33,916,051 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Taf7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624774	548,072 - 550,404 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624774	548,072 - 550,410 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TAF7
119 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005661764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK234936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK239576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK351126	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK390538	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK396974	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK399028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY610194	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU855722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000029957 ⟹ ENSSSCP00000026015

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	142,947,343 - 142,952,505 (-)	Ensembl

RefSeq Acc Id:

XM_005661764 ⟹ XP_005661821

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	142,949,271 - 142,952,611 (-)	NCBI

Sequence:

show sequence

CGCCCCAACTTCCGCCAGAAGCCTGCCGTCACTCACAGCCGCCTCCCGCCCAAGCGGTGACGTA
GCATCCTTTTCCGCTAGATCTGCGCTCCAGACGGAGTTCCACAGAGCTTGGGAGCTGCTGCGCT
GCCGAGCTGCTTCTTTGCCGCGCTGCCGAACTGCTCCGCTGCCGAGCTGCTGAGCTGCAGAATC
TGGCGCTTGGAGCTGCGAATCTCGGCGAGATTTCGCGTTGCCCATCCTGATCCATTTTACTGAT
CTGATAATCATTAGCGGATCGCTTTGCCAAGAGCTGGGAAGAACAAAGGAATCGGGAAGGAGAC
GCTGGGCCCCGGCCACTTTGCTGCGAGTGGCTTCCTTTTCCTTTCGCTTCGGTCCGGAGAGACT
GGATTTATAATCGTCACTGGATTGTAAGTACCCGAGGCGAAGAGAGCTCACTACGCCCCGCTTC
TTGAATATCTTTGTTCCGGGAGAGTTTGTGCATTGAAAGTTTCTGCTGCGCCTTCCTTTCTGTG
CCAAAAATCCTTCCGTAGGAGCGGCCATTTGCTTTCCTGCTAGCTAGCTCTCCCTGGTGGCTGC
AGCGGCATCTAGAGGTTGGAACTTGGCATTGCAGCTAATAGATTTAAAAGGACTTAATAAGTGT
TTGTAACCACTGGTATTCAGTCACAGCGTCTTTAGAAAGACTTGGGCCTTAATTCACAATAGAC
GCTTAGGTGCTTTTCTACTTAGAGCTTTTTGTACTTAAAGACTTCAATTTATGACGAACTAGTC
TTTCTGTTGACATAGCCGGAACTTTTTAGTCCAACAAGTGGTTGATAGAGAAAAAGTGAGTCAC
AGAGAAATAAAGATGAGTAAGAGCAAAGACGATGCTCCTCATGAACTGGAGAGCCAGTTTATCT
TACGCCTACCTCCGGAATATGCCTCTACGGTGAGGCGGGCAGTACAGTCTGGCCATGTCAACCT
GAAGGACAGACTGACAATTGAGTTACACCCCGATGGGCGTCATGGAATCGTCAGAGTGGACCGG
GTCCCACTGGCCTCAAAATTGGTAGATCTGCCCTGTGTTATGGAGAGTTTGAAAACCATTGATA
AAAAAACCTTTTACAAGACAGCTGATATCTGTCAGATGCTCGTCTCTACAGTTGATGGTGATCT
CTATCCCCCTGTGGAGGAACCAGCTGCTACTGCTGATCCCAAAGCAAGCAAGAAAAAGGATAAG
GACAAAGAGAAGAAGTTTATATGGAACCATGGAATTACTCTGCCTCTAAAAAATGTCCGAAAGA
GAAGGTTCCGAAAGACAGCAAAGAAGAAGTACATTGAGTCTCCGGATGTGGAAAAAGAAGTGAA
GCGCTTGCTGAGCACAGATGCCGAAGCTGTCAGTACCCGCTGGGAAATAATTGCTGAAGATGAA
ACAAAAGAAACAGAAAATCAAGGCCTTGATATCTCTTCCCCAGGAATGTCTGGCCACAGGCAGG
GCCATGACTCACTGGAACACGATGAGCTTCGGGAGATATTCAATGACCTCAGCAGCAGCAGTGA
GGATGAAGATGAGACACAGCATCAAGATGAAGAAGATATAAACATCATCGACACGGAGGAAGAT
CTGGAAAGGCAGCTACAGGACAAGCTCAATGAATCAGATGAACAGCACCAAGAAAATGAGGGAA
CCAATCAGCTGGTGATGGGAATTCAGAAACAGATTGATAACATGAAAGGCAAGCTCCAAGAGAC
CCAGGACAGGGCAAAGCGACAGGAGGATCTGATCATGAAGGTGGAAAATCTGGCTCTCAAGAAC
AGATTTCAGGCCGTGCTGGATGAACTGAAACAAAAGGAAGACCGAGAAAAGGAGCAGCTCAGCT
CTTTGCAGGAGGAGCTAGAATCACTCCTGGAGAAGTGAGGAGAGCTTTGATACTTAATTTCATT
CCTCAGAGTAGTCGGCATTGAAAGAAAAATTTTGGTTTCATCACCTGGACTAGGTACTATATAA
CTTTGCAGTAGTTGCCATTTTCTTCACTGCCTTCTATTGGGTTTGTCATATCGACAGATATAAA
TGTGAATTTCTTTCTCATTTGTCTTTAAGAACCACTTTTTTAGGTGTTTGTCGTGTAGGAAGTA
GGATGTATAGACAGAGAAATGTAAGGAAGTTGTAGGATTAGTGGAGGGAAGAGTTCAACTTACT
GATTAATCACAGCTTCACTGCAGGACTTTGCTACTGTTTCTCAGTTTACCAGAAGTTGCCATTG
CTATTCTGTGATGCCATCTGAGATAATTAGAGTCTAGTCTAAAGGCAGTGAAGCTTGTTTGCAT
ATGTTTTCCCATGCTGTAGCTATCTTTCTGCTCTTCAAAGCAGTTAATCATATGTAGCATTGCA
AATCATTTTCATAGTTGTTTGACCACAAGAAATAAAAACAAGTGATTTTCACCTCATAATGTGT
CTTTTTTAGGGGAAGGGGGTATCAGGTCCTCTTCTGAGGTGGTATTTTAGTGGGATTTAATGGA
CTGACCAATCGGATTCTTTTTTGTAGGAAAAGAAACAGTTATATTTTAAGAAAAAGAGGAACAC
AGCAGGGGAAAGAAATTGGGAAATTCATATGCAGTATGTTTCCAACCCCCCTGCTCCATTTTGA
GGAAATAGAGAAACTTCCTAAATTTTTTTTCAGCCTGATCTCAGTGTTTTCAATCCATACTGAG
CTTGTTTACATTTTTTCAAGGAGTTTAATTACTCCTCTTCCTCTACAATAGTCTACTGGGATAA
ATACTCTGTTACTCATCTATCGTAGGAGAGTGTAAGTTACTGTTGCTCTGTGTTCACCAGGCTG
TAAATTCCCTGAGATTAGGCACTTGCCTTGTTAGTCACTGTAAACTTACTAAAGAATAGTAAGT
TCAAGGGATACAGTGCCTGGATTTGTATCCTAGTTCAGTGACCTAGTTAGGTGATCTTGGGCAA
GTAAATTAACCTGTTTGCCTCAATTTCCTCATCTCTAAAATGGAGACGATAATCTCCCTCAGGA
CCCTTGAGTTGTGGCAATTGAGTTGATACTTAGAAAGGATTTAGAACAGTTCCTGGAAAAAAAG
CAAATTATTATTGCCTATTTACTGGGGTTGGAACATAACAGATCAGAGAATGATTTGAATTAAA
GAGTGACCAAAATGGTAGAAAGTGTGGAAAGAAACAGCTCGTTTGGAGTTCCCGCTGTAGCCAA
ACGGGATTGGCAGAGTCTTGGGAGCACTGGGATGCAGGTTTGATTCCTGGTGTGGCACAGAGGC
TTAGAGGATCTTCGGTGTTGATCTGATCCTTGCCTTGGCCTGGGAACTGCATATGCCAAAGGTC
AGCCAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005661821	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000026015
	ENSSSCP00000026015.1
	ENSSSCP00015029355.1
	ENSSSCP00025020718.1
	ENSSSCP00030015041.1
	ENSSSCP00035018110.1
	ENSSSCP00040030726.1
	ENSSSCP00045012726.1
	ENSSSCP00050016316.1
	ENSSSCP00055002714.1
	ENSSSCP00060008257.1
	ENSSSCP00065036024.1
	ENSSSCP00070003426.1

RefSeq Acc Id:

XP_005661821 ⟸ XM_005661764

- UniProtKB:

F1RMU2 (UniProtKB/TrEMBL), A0A4X1SLT6 (UniProtKB/TrEMBL), A0A480Y076 (UniProtKB/TrEMBL), A0A8D0PC37 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSKSKDDAPHELESQFILRLPPEYASTVRRAVQSGHVNLKDRLTIELHPDGRHGIVRVDRVPLA
SKLVDLPCVMESLKTIDKKTFYKTADICQMLVSTVDGDLYPPVEEPAATADPKASKKKDKDKEK
KFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSTRWEIIAEDETKET
ENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLSSSSEDEDETQHQDEEDINIIDTEEDLERQ
LQDKLNESDEQHQENEGTNQLVMGIQKQIDNMKGKLQETQDRAKRQEDLIMKVENLALKNRFQA
VLDELKQKEDREKEQLSSLQEELESLLEK

hide sequence

Ensembl Acc Id:

ENSSSCP00000026015 ⟸ ENSSSCT00000029957

Protein Domains

TAFII55 protein conserved region

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000028168	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015054923	UniProtKB/TrEMBL
	ENSSSCG00025035470	UniProtKB/TrEMBL
	ENSSSCG00030023964	UniProtKB/TrEMBL
	ENSSSCG00035034163	UniProtKB/TrEMBL
	ENSSSCG00040053262	UniProtKB/TrEMBL
	ENSSSCG00045010865	UniProtKB/TrEMBL
	ENSSSCG00050029312	UniProtKB/TrEMBL
	ENSSSCG00055001927	UniProtKB/TrEMBL
	ENSSSCG00060015184	UniProtKB/TrEMBL
	ENSSSCG00065060374	UniProtKB/TrEMBL
	ENSSSCG00070002241	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000029957	ENTREZGENE
	ENSSSCT00000029957.4	UniProtKB/TrEMBL
	ENSSSCT00015073122.1	UniProtKB/TrEMBL
	ENSSSCT00025048341.1	UniProtKB/TrEMBL
	ENSSSCT00030033319.1	UniProtKB/TrEMBL
	ENSSSCT00035045271.1	UniProtKB/TrEMBL
	ENSSSCT00040071953.1	UniProtKB/TrEMBL
	ENSSSCT00045018455.1	UniProtKB/TrEMBL
	ENSSSCT00050039390.1	UniProtKB/TrEMBL
	ENSSSCT00055003571.1	UniProtKB/TrEMBL
	ENSSSCT00060020194.1	UniProtKB/TrEMBL
	ENSSSCT00065082693.1	UniProtKB/TrEMBL
	ENSSSCT00070004156.1	UniProtKB/TrEMBL
InterPro	TAF7	UniProtKB/TrEMBL
	TAFII55_prot_cons_reg	UniProtKB/TrEMBL
KEGG Report	ssc:100523236	UniProtKB/TrEMBL
NCBI Gene	TAF7	ENTREZGENE
PANTHER	PTHR12228	UniProtKB/TrEMBL
	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 7	UniProtKB/TrEMBL
Pfam	TAFII55_N	UniProtKB/TrEMBL
SMART	TAFII55_N	UniProtKB/TrEMBL
UniProt	A0A480Y076	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SLT6	ENTREZGENE
	A0A8D0PC37	ENTREZGENE, UniProtKB/TrEMBL
	F1RMU2	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A4X1SLT6	UniProtKB/TrEMBL
VGNC ID	VGNC:93721	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

RGD Manual Annotations