ZDHHC9 (zinc finger DHHC-type palmitoyltransferase 9) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: ZDHHC9 (zinc finger DHHC-type palmitoyltransferase 9) Sus scrofa
Analyze
Symbol: ZDHHC9
Name: zinc finger DHHC-type palmitoyltransferase 9
RGD ID: 13996158
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); palmitoyltransferase activity (inferred); protein-cysteine S-palmitoyltransferase activity (inferred); INVOLVED IN peptidyl-L-cysteine S-palmitoylation (ortholog); protein palmitoylation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal hemophilia A (ortholog); FOUND IN cytosol (inferred); endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: palmitoyltransferase ZDHHC9; zinc finger DHHC-type containing 9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX106,401,245 - 106,436,014 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X106,397,139 - 106,436,103 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X122,170,189 - 122,205,037 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:19748569   PMID:30032202  


Genomics

Comparative Map Data
ZDHHC9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX106,401,245 - 106,436,014 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X106,397,139 - 106,436,103 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X122,170,189 - 122,205,037 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZDHHC9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X129,803,288 - 129,843,886 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX129,803,288 - 129,843,909 (-)EnsemblGRCh38hg38GRCh38
GRCh37X128,937,264 - 128,977,862 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X128,766,593 - 128,805,554 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X128,664,449 - 128,703,408NCBI
CeleraX129,323,767 - 129,364,414 (-)NCBICelera
Cytogenetic MapXq26.1NCBI
HuRefX118,338,764 - 118,378,757 (-)NCBIHuRef
CHM1_1X128,848,613 - 128,889,262 (-)NCBICHM1_1
T2T-CHM13v2.0X128,122,064 - 128,162,666 (-)NCBIT2T-CHM13v2.0
Zdhhc9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X47,260,844 - 47,297,792 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX47,260,846 - 47,297,755 (-)EnsemblGRCm39 Ensembl
GRCm38X48,171,967 - 48,208,702 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX48,171,969 - 48,208,878 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X45,525,148 - 45,561,879 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X44,416,598 - 44,453,310 (-)NCBIMGSCv36mm8
CeleraX35,674,299 - 35,710,725 (-)NCBICelera
Cytogenetic MapXA4NCBI
cM MapX25.55NCBI
Zdhhc9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X132,230,243 - 132,266,139 (-)NCBIGRCr8
mRatBN7.2X127,352,340 - 127,388,245 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX127,352,345 - 127,388,245 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX129,478,111 - 129,514,060 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X133,048,918 - 133,084,810 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X130,575,263 - 130,611,214 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X135,005,171 - 135,041,207 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX135,005,123 - 135,041,027 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X135,081,376 - 135,116,885 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X134,537,438 - 134,573,364 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX126,302,789 - 126,338,662 (-)NCBICelera
Cytogenetic MapXq36NCBI
Zdhhc9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554735,174,563 - 5,208,767 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554735,174,575 - 5,208,767 (+)NCBIChiLan1.0ChiLan1.0
ZDHHC9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X129,228,185 - 129,266,847 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X129,230,131 - 129,270,455 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X118,932,986 - 118,973,238 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X129,230,556 - 129,270,665 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX129,230,571 - 129,270,665 (-)Ensemblpanpan1.1panPan2
ZDHHC9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X101,011,072 - 101,096,394 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX100,996,607 - 101,043,228 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX87,184,996 - 87,270,387 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X102,862,545 - 102,948,146 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX102,864,567 - 102,896,674 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X100,280,828 - 100,366,232 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X102,127,017 - 102,212,421 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X101,904,811 - 101,990,352 (-)NCBIUU_Cfam_GSD_1.0
Zdhhc9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X99,244,189 - 99,275,735 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364791,711,713 - 1,741,167 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364791,711,756 - 1,743,306 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X105,082,531 - 105,120,802 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606542,495,912 - 42,536,963 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zdhhc9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247979,023,833 - 9,060,855 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247979,027,316 - 9,060,321 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZDHHC9
855 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000036127   ⟹   ENSSSCP00000029308
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 EnsemblX106,401,245 - 106,436,014 (-)Ensembl
RefSeq Acc Id: XM_003135365   ⟹   XP_003135413
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X106,397,139 - 106,436,077 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003360439   ⟹   XP_003360487
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X106,401,634 - 106,436,103 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021080766   ⟹   XP_020936425
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1X106,397,139 - 106,434,296 (-)NCBI
Sequence:
RefSeq Acc Id: XP_003135413   ⟸   XM_003135365
- UniProtKB: F1RTH7 (UniProtKB/TrEMBL),   A0A4X1W997 (UniProtKB/TrEMBL),   K7GL07 (UniProtKB/TrEMBL),   A0A4X1W9J9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020936425   ⟸   XM_021080766
- UniProtKB: A0A4X1W997 (UniProtKB/TrEMBL),   K7GL07 (UniProtKB/TrEMBL),   F1RTH7 (UniProtKB/TrEMBL),   A0A4X1W9J9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003360487   ⟸   XM_003360439
- UniProtKB: F1RTH7 (UniProtKB/TrEMBL),   A0A4X1W997 (UniProtKB/TrEMBL),   K7GL07 (UniProtKB/TrEMBL),   A0A4X1W9J9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000029308   ⟸   ENSSSCT00000036127
Protein Domains
Palmitoyltransferase DHHC


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000012653 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005022697 UniProtKB/TrEMBL
  ENSSSCG00025069198 UniProtKB/TrEMBL
  ENSSSCG00030018794 UniProtKB/TrEMBL
  ENSSSCG00035036370 UniProtKB/TrEMBL
  ENSSSCG00045039186 UniProtKB/TrEMBL
  ENSSSCG00050010279 UniProtKB/TrEMBL
  ENSSSCG00055004064 UniProtKB/TrEMBL
  ENSSSCG00060042033 UniProtKB/TrEMBL
  ENSSSCG00065044428 UniProtKB/TrEMBL
  ENSSSCG00070029707 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000036127 ENTREZGENE
  ENSSSCT00000036127.4 UniProtKB/TrEMBL
  ENSSSCT00005035888.1 UniProtKB/TrEMBL
  ENSSSCT00025095078.1 UniProtKB/TrEMBL
  ENSSSCT00030025951.1 UniProtKB/TrEMBL
  ENSSSCT00035048196.1 UniProtKB/TrEMBL
  ENSSSCT00045068165.1 UniProtKB/TrEMBL
  ENSSSCT00050013811.1 UniProtKB/TrEMBL
  ENSSSCT00055008001.1 UniProtKB/TrEMBL
  ENSSSCT00060056999.1 UniProtKB/TrEMBL
  ENSSSCT00065060755.1 UniProtKB/TrEMBL
  ENSSSCT00070059749.1 UniProtKB/TrEMBL
  ENSSSCT00070059750.1 UniProtKB/TrEMBL
InterPro Palmitoyltrfase_DHHC UniProtKB/TrEMBL
KEGG Report ssc:100523109 UniProtKB/TrEMBL
NCBI Gene ZDHHC9 ENTREZGENE
PANTHER PTHR22883:SF71 UniProtKB/TrEMBL
  ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam DHHC UniProtKB/TrEMBL
PROSITE DHHC UniProtKB/TrEMBL
UniProt A0A4X1W997 ENTREZGENE
  A0A4X1W9J9 ENTREZGENE, UniProtKB/TrEMBL
  F1RTH7 ENTREZGENE, UniProtKB/TrEMBL
  K7GL07 ENTREZGENE
UniProt Secondary A0A4X1W997 UniProtKB/TrEMBL
  K7GL07 UniProtKB/TrEMBL
VGNC ID VGNC:95131 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-10-22 ZDHHC9  zinc finger DHHC-type palmitoyltransferase 9  ZDHHC9  zinc finger DHHC-type containing 9  Symbol and/or name change 5135510 APPROVED