LOC110255234 (liver carboxylesterase-like) - Rat Genome Database

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Gene: LOC110255234 (liver carboxylesterase-like) Sus scrofa
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Symbol: LOC110255234
Name: liver carboxylesterase-like
RGD ID: 13885744
Description: ENCODES a pseudogene that exhibits carboxylesterase activity (inferred); sterol ester esterase activity (inferred); INVOLVED IN cellular response to cholesterol (inferred); cellular response to low-density lipoprotein particle stimulus (inferred); cholesterol biosynthetic process (inferred); PARTICIPATES IN capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; heroin pharmacodynamics pathway; ASSOCIATED WITH Brain Injuries (ortholog); Chromosome 16q12 Duplication Syndrome (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (inferred); endoplasmic reticulum (inferred); lipid droplet (inferred); INTERACTS WITH deoxynivalenol; monosodium L-glutamate; zearalenone
Type: pseudo
RefSeq Status: MODEL
RGD Orthologs
Human
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position: No map positions available.


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
endoplasmic reticulum  (IBA,IEA)
lipid droplet  (IBA,IEA)

Molecular Function

References

Genomics

Comparative Map Data
LOC110255234
(Sus scrofa - pig)		 No map positions available.
CES1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381655,802,851 - 55,833,096 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1655,802,851 - 55,833,337 (-)EnsemblGRCh38hg38GRCh38
GRCh371655,836,763 - 55,867,008 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361654,394,264 - 54,424,576 (-)NCBINCBI36Build 36hg18NCBI36
Build 341654,394,266 - 54,424,494NCBI
Celera1640,340,608 - 40,363,542 (-)NCBICelera
Cytogenetic Map16q12.2NCBI
HuRef1641,715,157 - 41,738,637 (-)NCBIHuRef
CHM1_11657,243,691 - 57,273,987 (-)NCBICHM1_1
T2T-CHM13v2.01661,597,797 - 61,628,094 (-)NCBIT2T-CHM13v2.0


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XR_002341147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Protein Sequences
Ensembl Protein ENSSSCP00000040296.2
  ENSSSCP00000048691.2
  ENSSSCP00000063725.1
  ENSSSCP00000064192.2
  ENSSSCP00000077955.1
Protein Domains
Carboxylesterase type B


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000039985 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000044642.3 UniProtKB/TrEMBL
  ENSSSCT00000047360.3 UniProtKB/TrEMBL
  ENSSSCT00000056385 ENTREZGENE
  ENSSSCT00000086279.1 UniProtKB/TrEMBL
  ENSSSCT00000089252.2 UniProtKB/TrEMBL
  ENSSSCT00000097375.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.1820 UniProtKB/TrEMBL
InterPro AB_hydrolase UniProtKB/TrEMBL
  CarbesteraseB UniProtKB/TrEMBL
  Carboxylesterase_B_CS UniProtKB/TrEMBL
  Type-B_Carboxylest/Lipase UniProtKB/TrEMBL
NCBI Gene LOC110255234 ENTREZGENE
PANTHER CARBOXYLESTERASE UniProtKB/TrEMBL
  LIVER CARBOXYLESTERASE 1-RELATED UniProtKB/TrEMBL
Pfam COesterase UniProtKB/TrEMBL
PROSITE CARBOXYLESTERASE_B_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53474 UniProtKB/TrEMBL
UniProt A0A287A8N2_PIG UniProtKB/TrEMBL
  A0A287AX14_PIG UniProtKB/TrEMBL
  A0A5G2QJR1_PIG UniProtKB/TrEMBL
  A0A5G2QZQ3_PIG UniProtKB/TrEMBL
  A0A8W4FFD8_PIG UniProtKB/TrEMBL