MFRP (membrane frizzled-related protein)

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Gene: MFRP (membrane frizzled-related protein) Sus scrofa

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Symbol:

MFRP

Name:

membrane frizzled-related protein

RGD ID:

13843869

Description:

INVOLVED IN eye photoreceptor cell development (ortholog); retina development in camera-type eye (ortholog); visual perception (ortholog); ASSOCIATED WITH CD3epsilon deficiency (ortholog); chromosome 11 partial duplication syndrome (ortholog); Dwarfism (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	46,550,315 - 46,556,077 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	46,550,383 - 46,556,305 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	51,584,361 - 51,590,860 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

CD3epsilon deficiency (ISO)

chromosome 11 partial duplication syndrome (ISO)

Dwarfism (ISO)

fundus albipunctatus (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

High Hyperopia (ISO)

immunodeficiency 17 (ISO)

immunodeficiency 18 (ISO)

immunodeficiency 19 (ISO)

inflammatory bowel disease 28 (ISO)

isolated microphthalmia 5 (ISO)

isolated microphthalmia 6 (ISO)

late-onset retinal degeneration (ISO)

microphthalmia (ISO)

nanophthalmos (ISO)

Nanophthalmos 2 (ISO)

RASopathy (ISO)

retinal degeneration (ISO)

retinitis pigmentosa (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

eye photoreceptor cell development (IEA,ISO)

retina development in camera-type eye (IEA,ISO)

visual perception (IEA,ISO)

Cellular Component

membrane (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

MFRP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	46,550,315 - 46,556,077 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	46,550,383 - 46,556,305 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	51,584,361 - 51,590,860 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MFRP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	119,338,942 - 119,346,705 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	119,338,942 - 119,346,705 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	119,209,652 - 119,217,415 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	118,716,836 - 118,722,580 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	118,716,835 - 118,722,580	NCBI
Celera	11	116,370,323 - 116,378,054 (-)	NCBI		Celera
Cytogenetic Map	11	q23.3	NCBI
HuRef	11	115,150,343 - 115,158,082 (-)	NCBI		HuRef
CHM1_1	11	119,096,203 - 119,103,942 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	119,359,579 - 119,367,342 (-)	NCBI		T2T-CHM13v2.0

Mfrp
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	44,013,067 - 44,020,484 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	44,013,026 - 44,020,484 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	44,101,770 - 44,109,187 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	44,101,729 - 44,109,187 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	43,909,853 - 43,917,270 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	43,909,925 - 43,917,270 (+)	NCBI		MGSCv36	mm8
Celera	9	41,359,597 - 41,367,008 (+)	NCBI		Celera
Cytogenetic Map	9	A5.1	NCBI
cM Map	9	24.6	NCBI

Mfrp
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	53,342,483 - 53,347,696 (+)	NCBI		GRCr8
mRatBN7.2	8	44,445,636 - 44,450,859 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	44,445,697 - 44,450,859 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	49,943,933 - 49,949,098 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	48,222,643 - 48,227,808 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	46,090,263 - 46,095,426 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	48,437,720 - 48,443,421 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	48,437,918 - 48,443,421 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	47,053,980 - 47,059,250 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	47,084,056 - 47,089,218 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	47,092,971 - 47,097,611 (+)	NCBI
Celera	8	44,032,894 - 44,038,056 (+)	NCBI		Celera
Cytogenetic Map	8	q22	NCBI

Mfrp
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955412	20,421,935 - 20,426,760 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955412	20,421,935 - 20,426,760 (-)	NCBI	ChiLan1.0	ChiLan1.0

MFRP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	120,046,694 - 120,054,325 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	121,152,657 - 121,157,778 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	114,179,998 - 114,187,716 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	118,107,317 - 118,115,050 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	118,107,317 - 118,115,050 (-)	Ensembl	panpan1.1		panPan2

MFRP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	14,555,619 - 14,561,577 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	14,556,065 - 14,561,623 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	14,609,393 - 14,614,363 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	14,499,276 - 14,504,240 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	14,499,485 - 14,504,210 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	14,637,560 - 14,642,522 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	14,541,551 - 14,546,518 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	14,581,669 - 14,586,636 (+)	NCBI		UU_Cfam_GSD_1.0

Mfrp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	101,350,829 - 101,355,821 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936542	4,272,264 - 4,277,252 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936542	4,272,250 - 4,277,231 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MFRP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	110,720,520 - 110,728,529 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	110,720,530 - 110,725,483 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	15,305,601 - 15,314,524 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Mfrp
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624784	14,710,042 - 14,714,715 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624784	14,709,834 - 14,714,927 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in MFRP
184 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	5	14	12	23	3	6	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003129941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013979475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU915638	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000016485 ⟹ ENSSSCP00000016042

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	46,550,315 - 46,556,077 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000087998 ⟹ ENSSSCP00000068078

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	46,550,837 - 46,556,077 (-)	Ensembl

RefSeq Acc Id:

XM_003129941 ⟹ XP_003129989

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	46,550,383 - 46,556,303 (-)	NCBI

Sequence:

show sequence

CACCACAGAGCACTTCGCTTCCTGTGCCTTTAAGGACTGCTGCCCTGTGCCAGGGTCTTGACCT
CAGCATCCTCAGCTGAGTTGGATTAAGGGACCGTTTTCATGCCATTGCGAATTCCTTCTGGCTG
CTGTCCCTTCCCCCACACAGAGGCAGAACAGCCAGTAGCCCGAATCAGTCTGCCAAGGGCAGCT
GGAGAGTTGGTCTGACCTGGCAGCCCCCGCCCTCAGAGAGTAGAGGCTGCTCCTTTGATAGGCG
GTTTAGGGGCACGGAGTGGGCCCTTTGGGGTCTTGGGCTGTCACGGGAACTCCAGAAGGCAATG
CAGAGCCTAGAGCCATGAAGGACTGCTCAGATATCATCCTCTGTGTGGAGACAACAGAGCTGAG
CAAGACGGAGTTCTGCAATCCTGCTTTTGAGCCTGAATCAGGGCTGCCTCGCCCTCCACCTGCC
TTCCGGGAGGACCCCAGCGGCCGCTTCCGAGCTCCCTGGCATGGTCAGCGCCCCCGAGGGCTGC
AGCCAGACTGCCGCTTCTCCTGGCTGTGTGTCCTCCTGCTGGCCAGCCTGCTGCTCCTGCTGCT
CGGGCTGCTGGTGGCCATCATCCTGGCCCAATTGCAGGCTGCATCCCCATCTGAGGCCGCCTTT
CATCTACCGCCTTCCCGAGGCTTCACCACCACTGGGGCCCCTAAAGGGCAACTGGAGGCAGGCA
TGAGCCCCACACCCCAGTCCACCTGTGGGGGCCTCCTTCCTGGCCCAAGGGGCTTCTTCAACAG
CCCCAACTACCCAGACCCTTACCCACCCAACACCTACTGCGTGTGGCATATCCAGGTGGCCACA
GACCATGCTATACAGCTCAAGATTGAAGCTCTCAGCATAGAGGGGGTGGCTTCTTGTCTTTTTG
ATCGCTTGGAAATCTCCCCCGAGCCTGAAGGCCCCCTCCTCAGAGTGTGTGGGAGGGTGCCTCC
CCCCACACTCAACACCAACGCCAGCCACCTCCAGGTGGCCTTCGTCTCTGACAGCAGCGTGGAA
GGATCTGGCTTCCACGCCTGGTACCAGGCTGTAGCCCCAGGGCACGGGAGCTGTGCCCACGATG
AGTTCCCCTGTGACCAGCTCGTCTGCCTGCTACCTGACTCAGTGTGCGATGGTTTTGCCAACTG
TGCTGATGGCAGTGATGAAACCAACTGCAGTGCCAAGTTCTCAGGGTGTGGGGGGAACCTGACT
GGGCTCCAGGGCATGCTCTCTGCTCCCATCTACCTGCAACAGTATCCTCACCACCAGCTTTGCA
CCTGGCATATCTCAGTGCCCGCTGGACATGGCATAGAACTGCAGTTTCACAACTTCAGCCTGGA
CACTCAGGACGCGTGCAAGTTTGACTATGTGGAAGTTTATGAGACCAGCAACTCAGGGGCCCTC
AGCCTCCTGGGCAGGTTCTGTGGAGCAGAACCGCCACCCCAGCGCCTCATCTCCTCGTACCACC
AGCTGGCTGTCCTTTTTAGGACAGATCATGGCATCAGCGGTGGGGGCTTCTCGGCCACCTACCA
GGCCCTCAATGCCACAGAGAAGCCCTGTGGACCTGGAGAGCTCTCCTGCCGGGATGCAGGGTGT
AAGAGTCTGCAGTGGATGTGTGGTTTATGGAGAGACTGTGCAGAGAGCAGTGGTGACAACTGCA
GCAGCCCCTTGTTCCCACCCCCAGAGCTGGCCTGTGAGCCTGTCCAGGTGGAGATGTGCATCGG
TCTGAGCTACAACACCACGGCCTTCCCTAACATCTGGGTGGGCATGGCCACCCAGGAGGAGGTG
GTGGAGCTCCTCAGAGGTTACAAGAGCCTGACAAGTCTGCCCTGCTACCAGAATTTCCGGAGGC
TCCTTTGCGGGCTGCTTGTGCCCCACTGCACCCCGCTAGGCAGTGTCCTTCCCCCTTGCCGCTC
TGTCTGCCAGGAGGCAGAGCGCCAGTGCCAGTCTGGCCTGGCACTCCTGGGCACCCCCTGGCCC
TTCAACTGCAACAGGCTGCCCGAGGCAGCTGGCCTGGAGTCTTGTGCCCAGCCCTGACCTTGAA
GCCGGCCCCTGCCCTCTGCTGCCCATCCTCCTTTGCCTATCAGGGCAGGCAAGCAGAGAAGCAA
AGGAAGGGGGCCAGCATGGGACTCTGCCCATCTCCTCTGGGTCTCCCCAGGGAGGGGAAGAGAA
GTCCTTGGGGCTAATGGGACCCTCCCACCTTCCCAGATCCCTCCCCATCCCTTTACTTGCTCCA
GCTGCTGCAAACAGCTGGCCTGACTCCACCACCTATACCACCAACAATCTGGACCACTTCCCAC
CCAAGCCTCTGACCCCAATTTGCTACCTGCTTTTTCAGGCTCTCCGCCACTCACCTTCTGACAT
TTTCATTTACTCAACAAAAATGTACTGAGTGCTTAGTTACATGGCAAGCCCTGTTCTGAGCACT
GGGAAGCTGCTTTGTCTACTGCTGCTGGAACCTTCCACCCTCAGGTCTCATCTTACCTTTCTC

hide sequence

RefSeq Acc Id:

XM_013979475 ⟹ XP_013834929

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	46,550,383 - 46,556,305 (-)	NCBI

Sequence:

show sequence

ACCACCACAGAGCACTTCGCTTCCTGTGCCTTTAAGGACTGCTGCCCTGTGCCAGGGTCTTGAC
CTCAGCATCCTCAGCTGAGTTGGATTAAGGGACCGTTTTCATGCCATTGCGAATTCCTTCTGGC
TGCTGTCCCTTCCCCCACACAGAGGCAGAACAGCCAGTAGCCCGAATCAGTCTGCCAAGGGCAG
CTGGAGAGTTGGTCTGACCTGGCAGCCCCCGCCCTCAGAGAGTAGAGGCTGCTCCTTTGATAGG
CGGTTTAGGGGCACGGAGTGGGCCCTTTGGGGTCTTGGGCTGTCACGGGAACTCCAGAAGGCAA
TGCAGAGCCTAGAGCCATGAAGGACTGCTCAGATATCATCCTCTGTGTGGAGACAACAGAGCTG
AGCAAGACGGAGTTCTGCAATCCTGCTTTTGAGCCTGAATCAGGGCTGCCTCGCCCTCCACCTG
CCTTCCGGGAGGACCCCAGCGGCCGCTTCCGAGCTCCCTGGCATGGTCAGCGCCCCCGAGGGCT
GCAGCCAGACTGCCGCTTCTCCTGGCTGTGTGTCCTCCTGCTGGCCAGCCTGCTGCTCCTGCTG
CTCGGGCTGCTGGTGGCCATCATCCTGGCCCAATTGCAGGCTGCATCCCCATCTGAGGCCGCCT
TTCATCTACCGCCTTCCCGAGGCTTCACCACCACTGGGGCCCCTAAAGGGCAACTGGAGGCAGG
CATGAGCCCCACACCCCAGTCCACCTGTGGGGGCCTCCTTCCTGGCCCAAGGGGCTTCTTCAAC
AGCCCCAACTACCCAGACCCTTACCCACCCAACACCTACTGCGTGTGGCATATCCAGGTGGCCA
CAGACCATGCTATACAGCTCAAGATTGAAGCTCTCAGCATAGAGGGGGTGGCTTCTTGTCTTTT
TGATCGCTTGGAAATCTCCCCCGAGCCTGAAGGCCCCCTCCTCAGAGTGTGTGGGAGGGTGCCT
CCCCCCACACTCAACACCAACGCCAGCCACCTCCAGGTGGCCTTCGTCTCTGACAGCAGCGTGG
AAGGATCTGGCTTCCACGCCTGGTACCAGGCTGTAGCCCCAGGGCACGGGAGCTGTGCCCACGA
TGAGTTCCCCTGTGACCAGCTCGTCTGCCTGCTACCTGACTCAGTGTGCGATGGTTTTGCCAAC
TGTGCTGATGGCAGTGATGAAACCAACTGCAGTGCCAAGTTCTCAGGTATGGCCCCCACCAGCC
TCAGGGCGGGCACTGTCTTCAGGCATCTGATCCAGGTTGAGGCCGTCTTCCTCAGGCCTGGCCC
AGCCCCAAACCTGCCTGGTTACTCTTTTGGCCCAGAATTTGTTTCCCCACAGGCATGGCCAAAA
CTCCTCTGCCGTCAATGCCAGCCCTACTGGGTGAAGGCCCAGACCTGGCAAACTCATGAGCCCC
TCTGCCCCTGTACAGGGTGTGGGGGGAACCTGACTGGGCTCCAGGGCATGCTCTCTGCTCCCAT
CTACCTGCAACAGTATCCTCACCACCAGCTTTGCACCTGGCATATCTCAGTGCCCGCTGGACAT
GGCATAGAACTGCAGTTTCACAACTTCAGCCTGGACACTCAGGACGCGTGCAAGTTTGACTATG
TGGAAGTTTATGAGACCAGCAACTCAGGGGCCCTCAGCCTCCTGGGCAGGTTCTGTGGAGCAGA
ACCGCCACCCCAGCGCCTCATCTCCTCGTACCACCAGCTGGCTGTCCTTTTTAGGACAGATCAT
GGCATCAGCGGTGGGGGCTTCTCGGCCACCTACCAGGCCCTCAATGCCACAGAGAAGCCCTGTG
GACCTGGAGAGCTCTCCTGCCGGGATGCAGGGTGTAAGAGTCTGCAGTGGATGTGTGGTTTATG
GAGAGACTGTGCAGAGAGCAGTGGTGACAACTGCAGCAGCCCCTTGTTCCCACCCCCAGAGCTG
GCCTGTGAGCCTGTCCAGGTGGAGATGTGCATCGGTCTGAGCTACAACACCACGGCCTTCCCTA
ACATCTGGGTGGGCATGGCCACCCAGGAGGAGGTGGTGGAGCTCCTCAGAGGTTACAAGAGCCT
GACAAGTCTGCCCTGCTACCAGAATTTCCGGAGGCTCCTTTGCGGGCTGCTTGTGCCCCACTGC
ACCCCGCTAGGCAGTGTCCTTCCCCCTTGCCGCTCTGTCTGCCAGGAGGCAGAGCGCCAGTGCC
AGTCTGGCCTGGCACTCCTGGGCACCCCCTGGCCCTTCAACTGCAACAGGCTGCCCGAGGCAGC
TGGCCTGGAGTCTTGTGCCCAGCCCTGACCTTGAAGCCGGCCCCTGCCCTCTGCTGCCCATCCT
CCTTTGCCTATCAGGGCAGGCAAGCAGAGAAGCAAAGGAAGGGGGCCAGCATGGGACTCTGCCC
ATCTCCTCTGGGTCTCCCCAGGGAGGGGAAGAGAAGTCCTTGGGGCTAATGGGACCCTCCCACC
TTCCCAGATCCCTCCCCATCCCTTTACTTGCTCCAGCTGCTGCAAACAGCTGGCCTGACTCCAC
CACCTATACCACCAACAATCTGGACCACTTCCCACCCAAGCCTCTGACCCCAATTTGCTACCTG
CTTTTTCAGGCTCTCCGCCACTCACCTTCTGACATTTTCATTTACTCAACAAAAATGTACTGAG
TGCTTAGTTACATGGCAAGCCCTGTTCTGAGCACTGGGAAGCTGCTTTGTCTACTGCTGCTGGA
ACCTTCCACCCTCAGGTCTCATCTTACCTTTCTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003129989	(Get FASTA)	NCBI Sequence Viewer
	XP_013834929	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000016042
	ENSSSCP00000016042.1
	ENSSSCP00000068078.1
	ENSSSCP00025010061.1
	ENSSSCP00035011683.1
	ENSSSCP00035011686.1
	ENSSSCP00045019841.1
	ENSSSCP00065048820.1
	ENSSSCP00065048823.1
	ENSSSCP00070000350.1
	ENSSSCP00070000353.1

RefSeq Acc Id:	XP_013834929 ⟸ XM_013979475
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0R2W2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKDCSDIILCVETTELSKTEFCNPAFEPESGLPRPPPAFREDPSGRFRAPWHGQRPRGLQPDCR FSWLCVLLLASLLLLLLGLLVAIILAQLQAASPSEAAFHLPPSRGFTTTGAPKGQLEAGMSPTP QSTCGGLLPGPRGFFNSPNYPDPYPPNTYCVWHIQVATDHAIQLKIEALSIEGVASCLFDRLEI SPEPEGPLLRVCGRVPPPTLNTNASHLQVAFVSDSSVEGSGFHAWYQAVAPGHGSCAHDEFPCD QLVCLLPDSVCDGFANCADGSDETNCSAKFSGMAPTSLRAGTVFRHLIQVEAVFLRPGPAPNLP GYSFGPEFVSPQAWPKLLCRQCQPYWVKAQTWQTHEPLCPCTGCGGNLTGLQGMLSAPIYLQQY PHHQLCTWHISVPAGHGIELQFHNFSLDTQDACKFDYVEVYETSNSGALSLLGRFCGAEPPPQR LISSYHQLAVLFRTDHGISGGGFSATYQALNATEKPCGPGELSCRDAGCKSLQWMCGLWRDCAE SSGDNCSSPLFPPPELACEPVQVEMCIGLSYNTTAFPNIWVGMATQEEVVELLRGYKSLTSLPC YQNFRRLLCGLLVPHCTPLGSVLPPCRSVCQEAERQCQSGLALLGTPWPFNCNRLPEAAGLESC AQP hide sequence

RefSeq Acc Id:	XP_003129989 ⟸ XM_003129941
- Peptide Label:	isoform X2
- UniProtKB:	F1SAF7 (UniProtKB/TrEMBL), A0A4X1SE15 (UniProtKB/TrEMBL), A0A8D0R2W2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKDCSDIILCVETTELSKTEFCNPAFEPESGLPRPPPAFREDPSGRFRAPWHGQRPRGLQPDCR FSWLCVLLLASLLLLLLGLLVAIILAQLQAASPSEAAFHLPPSRGFTTTGAPKGQLEAGMSPTP QSTCGGLLPGPRGFFNSPNYPDPYPPNTYCVWHIQVATDHAIQLKIEALSIEGVASCLFDRLEI SPEPEGPLLRVCGRVPPPTLNTNASHLQVAFVSDSSVEGSGFHAWYQAVAPGHGSCAHDEFPCD QLVCLLPDSVCDGFANCADGSDETNCSAKFSGCGGNLTGLQGMLSAPIYLQQYPHHQLCTWHIS VPAGHGIELQFHNFSLDTQDACKFDYVEVYETSNSGALSLLGRFCGAEPPPQRLISSYHQLAVL FRTDHGISGGGFSATYQALNATEKPCGPGELSCRDAGCKSLQWMCGLWRDCAESSGDNCSSPLF PPPELACEPVQVEMCIGLSYNTTAFPNIWVGMATQEEVVELLRGYKSLTSLPCYQNFRRLLCGL LVPHCTPLGSVLPPCRSVCQEAERQCQSGLALLGTPWPFNCNRLPEAAGLESCAQP hide sequence

Ensembl Acc Id:

ENSSSCP00000016042 ⟸ ENSSSCT00000016485

Ensembl Acc Id:

ENSSSCP00000068078 ⟸ ENSSSCT00000087998

Protein Domains

CUB FZ

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000015119	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00025017635	UniProtKB/TrEMBL
	ENSSSCG00035022995	UniProtKB/TrEMBL
	ENSSSCG00045016874	UniProtKB/TrEMBL
	ENSSSCG00065078545	UniProtKB/TrEMBL
	ENSSSCG00070000234	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000016485	ENTREZGENE
	ENSSSCT00000016485.4	UniProtKB/TrEMBL
	ENSSSCT00000087998.1	UniProtKB/TrEMBL
	ENSSSCT00025023893.1	UniProtKB/TrEMBL
	ENSSSCT00035030093.1	UniProtKB/TrEMBL
	ENSSSCT00035030096.1	UniProtKB/TrEMBL
	ENSSSCT00045028687.1	UniProtKB/TrEMBL
	ENSSSCT00065108924.1	UniProtKB/TrEMBL
	ENSSSCT00065108930.1	UniProtKB/TrEMBL
	ENSSSCT00070000419.1	UniProtKB/TrEMBL
	ENSSSCT00070000422.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.2000.10	UniProtKB/TrEMBL
	2.60.120.290	UniProtKB/TrEMBL
	4.10.400.10	UniProtKB/TrEMBL
InterPro	CUB_dom	UniProtKB/TrEMBL
	Dev_metalloprotease_endo_rcpt	UniProtKB/TrEMBL
	Frizzled_dom	UniProtKB/TrEMBL
	Frizzled_dom_sf	UniProtKB/TrEMBL
	LDL_receptor-like_sf	UniProtKB/TrEMBL
	LDLR_class-A_CS	UniProtKB/TrEMBL
	LDrepeatLR_classA_rpt	UniProtKB/TrEMBL
	Sperma_CUB_dom_sf	UniProtKB/TrEMBL
KEGG Report	ssc:100520397	UniProtKB/TrEMBL
NCBI Gene	MFRP	ENTREZGENE
PANTHER	MEMBRANE FRIZZLED-RELATED PROTEIN	UniProtKB/TrEMBL
	OVOCHYMASE-RELATED	UniProtKB/TrEMBL
Pfam	CUB	UniProtKB/TrEMBL
	Ldl_recept_a	UniProtKB/TrEMBL
	PF01392	UniProtKB/TrEMBL
PROSITE	CUB	UniProtKB/TrEMBL
	LDLRA_1	UniProtKB/TrEMBL
	LDLRA_2	UniProtKB/TrEMBL
	PS50038	UniProtKB/TrEMBL
SMART	CUB	UniProtKB/TrEMBL
	FRI	UniProtKB/TrEMBL
	LDLa	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49854	UniProtKB/TrEMBL
	SSF57424	UniProtKB/TrEMBL
	SSF63501	UniProtKB/TrEMBL
UniProt	A0A4X1SE15	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SEW3_PIG	UniProtKB/TrEMBL
	A0A5G2QTB8_PIG	UniProtKB/TrEMBL
	A0A8D0R2W2	ENTREZGENE, UniProtKB/TrEMBL
	F1SAF7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:90181	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

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