CASP5 (caspase 5) - Rat Genome Database

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Gene: CASP5 (caspase 5) Homo sapiens
Analyze
Symbol: CASP5
Name: caspase 5
RGD ID: 1351672
HGNC Page HGNC:1506
Description: Enables cysteine-type endopeptidase activity. Involved in cellular response to mechanical stimulus and protein maturation. Part of NLRP1 inflammasome complex. Biomarker of Alzheimer's disease.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: CASP-5; caspase 5 variant X1; caspase 5, apoptosis-related cysteine peptidase; caspase 5, apoptosis-related cysteine protease; caspase-5; ICE(rel)-III; ICE(rel)III; ICEREL-III; ICH-3; MGC141966; protease ICH-3; protease TY; TY protease
RGD Orthologs
Bonobo
Green Monkey
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811104,994,243 - 105,023,168 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11104,994,235 - 105,023,168 (-)EnsemblGRCh38hg38GRCh38
GRCh3711104,864,970 - 104,893,895 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611104,370,180 - 104,384,909 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411104,370,179 - 104,384,909NCBI
Celera11102,029,166 - 102,058,058 (-)NCBICelera
Cytogenetic Map11q22.3NCBI
HuRef11100,795,913 - 100,824,883 (-)NCBIHuRef
CHM1_111104,747,902 - 104,776,824 (-)NCBICHM1_1
T2T-CHM13v2.011104,998,332 - 105,027,245 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5HumanAlzheimer's disease  IEP 13782269 RGD 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5Humanataxia telangiectasia  IAGPRGD:1272337728554872ClinVar Annotator: match by term: Ataxia-telangiectasia syndromeClinVarPMID:23807571|PMID:25614872|PMID:28492532
CASP5Humanchromosome 11 partial duplication syndrome  IAGPRGD:384714648554872ClinVar Annotator: match by term: Distal trisomy 11qClinVarPMID:25741868
CASP5Humanintellectual disability  IAGPRGD:427234668554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 

1 to 20 of 33 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5Human17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of CASP5 mRNACTDPMID:21826169|PMID:22574217
CASP5Humanarsenous acid multiple interactionsEXP 6480464[sanguinarine co-treated with Arsenic Trioxide] results in increased expression of CASP5 mRNACTDPMID:24345465
CASP5Humanarsenous acid increases expressionEXP 6480464Arsenic Trioxide results in increased expression of CASP5 mRNACTDPMID:24345465
CASP5Humanbenzo[a]pyrene affects methylationEXP 6480464Benzo(a)pyrene affects the methylation of CASP5 promoterCTDPMID:27901495
CASP5Humanbisphenol A affects expressionEXP 6480464bisphenol A affects the expression of CASP5 mRNACTDPMID:21826169
CASP5Humancadmium dichloride decreases expressionEXP 6480464Cadmium Chloride results in decreased expression of CASP5 mRNACTDPMID:19426795
CASP5Humancarbon nanotube increases expressionEXP 6480464Nanotubes, Carbon results in increased expression of CASP5 mRNACTDPMID:29348435
CASP5Humancopper(II) sulfate increases expressionEXP 6480464Copper Sulfate results in increased expression of CASP5 mRNACTDPMID:19549813
CASP5Humandiarsenic trioxide multiple interactionsEXP 6480464[sanguinarine co-treated with Arsenic Trioxide] results in increased expression of CASP5 mRNACTDPMID:24345465
CASP5Humandiarsenic trioxide increases expressionEXP 6480464Arsenic Trioxide results in increased expression of CASP5 mRNACTDPMID:24345465
CASP5HumanDibutyl phosphate affects expressionEXP 6480464di-n-butylphosphoric acid affects the expression of CASP5 mRNACTDPMID:37042841
CASP5Humanlamivudine multiple interactionsEXP 6480464[Zidovudine co-treated with Lamivudine] results in increased expression of CASP5 mRNACTDPMID:15784690
CASP5Humanlipopolysaccharide multiple interactionsEXP 6480464[S-(1,2-dichlorovinyl)cysteine affects the susceptibility to Lipopolysaccharides] which results in increased expression of CASP5 mRNA; [S-(1,2-dichlorovinyl)cysteine more ...CTDPMID:35811015
CASP5Humanlipopolysaccharide increases expressionEXP 6480464Lipopolysaccharides results in increased expression of CASP5 mRNACTDPMID:35811015
CASP5Humanlithium chloride increases expressionEXP 6480464Lithium Chloride results in increased expression of CASP5 mRNACTDPMID:23527032
CASP5Humanmetformin multiple interactionsEXP 6480464[Paclitaxel co-treated with Metformin] results in increased expression of CASP5 mRNACTDPMID:29309887
CASP5Humanp-menthan-3-ol decreases expressionEXP 6480464Menthol results in decreased expression of CASP5 mRNACTDPMID:26760959
CASP5Humanpaclitaxel increases expressionEXP 6480464Paclitaxel results in increased expression of CASP5 mRNA; Paclitaxel results in increased expression of CASP5 more ...CTDPMID:15907983|PMID:18058816
CASP5Humanpaclitaxel multiple interactionsEXP 6480464[Paclitaxel co-treated with Metformin] results in increased expression of CASP5 mRNACTDPMID:29309887
CASP5Humanparaquat decreases expressionEXP 6480464Paraquat results in decreased expression of CASP5 mRNACTDPMID:18836921

1 to 20 of 33 rows

Biological Process
1 to 12 of 12 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5Humanapoptotic process involved_inTAS 150520179 PMID:7797592PINCPMID:7797592
CASP5Humanapoptotic process NOT|involved_inIBAPANTHER:PTN000047947|PANTHER:PTN002573059150520179 GO_CentralGO_REF:0000033
CASP5Humancellular response to mechanical stimulus involved_inIEP 150520179 PMID:19593445UniProtPMID:19593445
CASP5Humanpositive regulation of inflammatory response involved_inIBAMGI:107700|PANTHER:PTN002573059|UniProtKB:P49662|ZFIN:ZDB-GENE-020812-1150520179 GO_CentralGO_REF:0000033
CASP5Humanpositive regulation of neuron apoptotic process involved_inIBAMGI:1277950|PANTHER:PTN000047947|RGD:2275|RGD:620945|RGD:69274|RGD:70967|WB:WBGene00000417150520179 GO_CentralGO_REF:0000033
CASP5Humanprotein maturation involved_inIEAARBA:ARBA00026902150520179 UniProtGO_REF:0000117
CASP5Humanprotein maturation involved_inIDA 150520179 PMID:37993714UniProtPMID:37993714
CASP5Humanproteolysis involved_inIEAInterPro:IPR001309|InterPro:IPR002138|InterPro:IPR002398|InterPro:IPR011600150520179 InterProGO_REF:0000002
CASP5Humanproteolysis involved_inIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
CASP5Humanproteolysis involved_inTAS 150520179 PMID:7797592PINCPMID:7797592
CASP5Humanregulation of apoptotic process involved_inIEAInterPro:IPR001315150520179 InterProGO_REF:0000002
CASP5Humansubstantia nigra development involved_inHEP 150520179 PMID:22926577UniProtPMID:22926577
1 to 12 of 12 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5Humancytoplasm is_active_inIBAFB:FBgn0010501|FB:FBgn0019972|FB:FBgn0020381|FB:FBgn0028381|FB:FBgn0033051|MGI:107700|MGI:107739|MGI:1261423|MGI:1277950|MGI:1312922|MGI:1336166|MGI:97295|PANTHER:PTN000047947|RGD:620945|UniProtKB:O15519|UniProtKB:P31944|UniProtKB:P42574|UniProtKB:P49662|UniProtKB:P51878|UniProtKB:P55210|UniProtKB:P55211|UniProtKB:P55212|UniProtKB:Q14790|UniProtKB:Q6UXS9|UniProtKB:Q8MKI5|UniProtKB:Q92851|UniProtKB:Q95ND5|WB:WBGene00000417|ZFIN:ZDB-GENE-000616-3|ZFIN:ZDB-GENE-020812-1150520179 GO_CentralGO_REF:0000033
CASP5Humancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-9710101
CASP5Humancytosol is_active_inIBAMGI:107700|MGI:1277950|PANTHER:PTN008306143|UniProtKB:P31944|UniProtKB:P49662|UniProtKB:P51878|UniProtKB:P55211|ZFIN:ZDB-GENE-000616-3|ZFIN:ZDB-GENE-020812-1150520179 GO_CentralGO_REF:0000033
CASP5HumanNLRP1 inflammasome complex part_ofIDA 150520179 PMID:12191486UniProtPMID:12191486
CASP5HumanNLRP1 inflammasome complex part_ofIBAPANTHER:PTN002573059|UniProtKB:P51878|ZFIN:ZDB-GENE-000616-3|ZFIN:ZDB-GENE-020812-1150520179 GO_CentralGO_REF:0000033
CASP5Humanprotein-containing complex part_ofIEAARBA:ARBA00028902150520179 UniProtGO_REF:0000117

Molecular Function
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5Humancysteine-type endopeptidase activity enablesIEAInterPro:IPR001309|InterPro:IPR002138|InterPro:IPR002398|InterPro:IPR011600150520179 InterProGO_REF:0000002
CASP5Humancysteine-type endopeptidase activity enablesIDA 150520179 PMID:16920334, PMID:37993714UniProtPMID:16920334|PMID:37993714
CASP5Humancysteine-type endopeptidase activity enablesIEAARBA:ARBA00028064150520179 UniProtGO_REF:0000117
CASP5Humancysteine-type peptidase activity enablesIEAUniProtKB-KW:KW-0788150520179 UniProtGO_REF:0000043
CASP5Humancysteine-type peptidase activity enablesTAS 150520179 PMID:7797592PINCPMID:7797592
CASP5Humancysteine-type peptidase activity enablesIEAInterPro:IPR015917150520179 InterProGO_REF:0000002
CASP5Humanhydrolase activity enablesIEAUniProtKB-KW:KW-0378150520179 UniProtGO_REF:0000043
CASP5Humanpeptidase activity enablesIEAUniProtKB-KW:KW-0645150520179 UniProtGO_REF:0000043
CASP5Humanprotein binding enablesIPIUniProtKB:P30740150520179 PMID:30692621UniProtPMID:30692621
1 to 9 of 9 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5Humaninterleukin-1 signaling pathway   TAS 5490211 RGD 

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5HumanNOD-like receptor signaling pathway  IEA 6907045 KEGGhsa:04621
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CASP5HumanIntellectual disability  IAGPRGD:427234668554872ClinVar Annotator: match by term: Intellectual disabilityClinVar 

#
Reference Title
Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Caspase gene expression in the brain as a function of the clinical progression of Alzheimer disease. Pompl PN, etal., Arch Neurol. 2003 Mar;60(3):369-76.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. The inflammasomes. Schroder K and Tschopp J, Cell. 2010 Mar 19;140(6):821-32. doi: 10.1016/j.cell.2010.01.040.
PMID:7797592   PMID:8617266   PMID:9250871   PMID:9298992   PMID:9894612   PMID:10872455   PMID:10986288   PMID:11356849   PMID:11535131   PMID:12191486   PMID:12477932   PMID:12479849  
PMID:12853457   PMID:12964016   PMID:15886296   PMID:16886895   PMID:16893518   PMID:16920334   PMID:17418785   PMID:17676485   PMID:18430458   PMID:19074885   PMID:19203830   PMID:19269008  
PMID:19270026   PMID:19414860   PMID:19573080   PMID:19593445   PMID:19604093   PMID:19773279   PMID:20237496   PMID:20379614   PMID:20402676   PMID:20434535   PMID:20635389   PMID:20855536  
PMID:21051981   PMID:21191419   PMID:21454616   PMID:21668377   PMID:21700414   PMID:21873635   PMID:21969293   PMID:22906436   PMID:22926577   PMID:25753570   PMID:25943872   PMID:26173988  
PMID:26508369   PMID:26884849   PMID:28422993   PMID:28514442   PMID:29158166   PMID:29715460   PMID:29987050   PMID:30250284   PMID:30604868   PMID:30692621   PMID:33961781   PMID:34747049  
PMID:34895171   PMID:35030963   PMID:37603195   PMID:37993714  



CASP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811104,994,243 - 105,023,168 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11104,994,235 - 105,023,168 (-)EnsemblGRCh38hg38GRCh38
GRCh3711104,864,970 - 104,893,895 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611104,370,180 - 104,384,909 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411104,370,179 - 104,384,909NCBI
Celera11102,029,166 - 102,058,058 (-)NCBICelera
Cytogenetic Map11q22.3NCBI
HuRef11100,795,913 - 100,824,883 (-)NCBIHuRef
CHM1_111104,747,902 - 104,776,824 (-)NCBICHM1_1
T2T-CHM13v2.011104,998,332 - 105,027,245 (-)NCBIT2T-CHM13v2.0
CASP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29105,781,678 - 105,814,359 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111106,870,065 - 106,888,600 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01199,931,066 - 99,963,652 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111103,417,399 - 103,432,176 (-)NCBIpanpan1.1PanPan1.1panPan2
LOC103248366
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1196,363,677 - 96,388,966 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604329,516,665 - 29,536,889 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.

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Variants in CASP5
42 total Variants

1 to 10 of 582 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_003183.6(ADAM17):c.705C>G (p.Phe235Leu) single nucleotide variant Inflammatory skin and bowel disease, neonatal, 1 [RCV000528582] Chr2:9526159 [GRCh38]
Chr2:9666288 [GRCh37]
Chr2:2p25.1
uncertain significance
NM_003183.6(ADAM17):c.1695T>C (p.Thr565=) single nucleotide variant Inflammatory skin and bowel disease, neonatal, 1 [RCV000551089]|not provided [RCV004708939] Chr2:9497202 [GRCh38]
Chr2:9637331 [GRCh37]
Chr2:2p25.1
benign
NM_003183.6(ADAM17):c.603_606del (p.Asp201fs) deletion Inflammatory skin and bowel disease, neonatal, 1 [RCV000023322] Chr2:9527799..9527802 [GRCh38]
Chr2:9667928..9667931 [GRCh37]
Chr2:2p25.1
pathogenic
NM_003183.6(ADAM17):c.867A>G (p.Gln289=) single nucleotide variant Inflammatory skin and bowel disease, neonatal, 1 [RCV000549319] Chr2:9521293 [GRCh38]
Chr2:9661422 [GRCh37]
Chr2:2p25.1
likely benign
NM_003183.6(ADAM17):c.604A>G (p.Arg202Gly) single nucleotide variant Inflammatory skin and bowel disease, neonatal, 1 [RCV000547882]|not provided [RCV001692182] Chr2:9527801 [GRCh38]
Chr2:9667930 [GRCh37]
Chr2:2p25.1
benign
GRCh38/hg38 2p25.3-24.3(chr2:30141-14494040)x3 copy number gain See cases [RCV000052928] Chr2:30141..14494040 [GRCh38]
Chr2:30141..14634164 [GRCh37]
Chr2:20141..14551615 [NCBI36]
Chr2:2p25.3-24.3
pathogenic
GRCh38/hg38 2p25.3-23.1(chr2:30141-31766749)x3 copy number gain See cases [RCV000052929] Chr2:30141..31766749 [GRCh38]
Chr2:30141..31991818 [GRCh37]
Chr2:20141..31845322 [NCBI36]
Chr2:2p25.3-23.1
pathogenic
GRCh38/hg38 2p25.3-24.3(chr2:30342-14866951)x3 copy number gain See cases [RCV000052931] Chr2:30342..14866951 [GRCh38]
Chr2:30342..15007075 [GRCh37]
Chr2:20342..14924526 [NCBI36]
Chr2:2p25.3-24.3
pathogenic
GRCh38/hg38 2p25.3-25.1(chr2:50661-9652907)x3 copy number gain See cases [RCV000052932] Chr2:50661..9652907 [GRCh38]
Chr2:50661..9793036 [GRCh37]
Chr2:40661..9710487 [NCBI36]
Chr2:2p25.3-25.1
pathogenic
GRCh38/hg38 2p25.3-16.1(chr2:66097-55570637)x3 copy number gain See cases [RCV000052933] Chr2:66097..55570637 [GRCh38]
Chr2:66097..55797773 [GRCh37]
Chr2:56097..55651277 [NCBI36]
Chr2:2p25.3-16.1
pathogenic
1 to 10 of 582 rows

Predicted Target Of
Summary Value
Count of predictions:2338
Count of miRNA genes:822
Interacting mature miRNAs:929
Transcripts:ENST00000260315, ENST00000393139, ENST00000393141, ENST00000418434, ENST00000438448, ENST00000444749, ENST00000456094, ENST00000456200, ENST00000526056, ENST00000531367
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1559115SCL20_HSerum cholesterol level QTL 20 (human)3.220.001213Lipid levelLDL cholesterol11100442501126442501Human

D11S4491  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711104,874,037 - 104,874,166UniSTSGRCh37
Build 3611104,379,247 - 104,379,376RGDNCBI36
Celera11102,038,237 - 102,038,366RGD
HuRef11100,804,985 - 100,805,114UniSTS
RH71301  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711104,866,518 - 104,868,190UniSTSGRCh37
Celera11102,030,717 - 102,032,389UniSTS
Cytogenetic Map11q22.2-q22.3UniSTS
HuRef11100,797,465 - 100,799,137UniSTS
GeneMap99-GB4 RH Map11353.76UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1113 2050 1830 1759 3275 1421 1931 4 501 1537 371 1643 5595 5268 24 2543 691 1476 1318 140 1


1 to 26 of 26 rows
RefSeq Transcripts NM_001136109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001136110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001136112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_024239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_036562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011543021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK296660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP001153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC074994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC113406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ228672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ228673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ228674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ228675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ228676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ228677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ508420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DR005081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF455484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  MN880664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U28015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  W60703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X94993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 26 of 26 rows

Ensembl Acc Id: ENST00000260315   ⟹   ENSP00000260315
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11104,994,243 - 105,023,168 (-)Ensembl
Ensembl Acc Id: ENST00000393141   ⟹   ENSP00000376849
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11104,994,240 - 105,023,168 (-)Ensembl
Ensembl Acc Id: ENST00000418434   ⟹   ENSP00000398130
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11104,994,240 - 105,023,168 (-)Ensembl
Ensembl Acc Id: ENST00000438448   ⟹   ENSP00000396053
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11104,994,235 - 104,999,028 (-)Ensembl
Ensembl Acc Id: ENST00000444749   ⟹   ENSP00000388365
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11104,994,277 - 105,023,167 (-)Ensembl
Ensembl Acc Id: ENST00000456094   ⟹   ENSP00000415241
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11105,003,274 - 105,023,143 (-)Ensembl
Ensembl Acc Id: ENST00000456200   ⟹   ENSP00000408455
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11104,995,786 - 105,023,136 (-)Ensembl
Ensembl Acc Id: ENST00000526056   ⟹   ENSP00000436877
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11104,995,744 - 105,023,136 (-)Ensembl
Ensembl Acc Id: ENST00000531367   ⟹   ENSP00000434471
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11104,995,744 - 105,023,136 (-)Ensembl
RefSeq Acc Id: NM_001136109   ⟹   NP_001129581
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811104,994,243 - 105,023,168 (-)NCBI
GRCh3711104,864,967 - 104,893,895 (-)ENTREZGENE
HuRef11100,795,913 - 100,824,883 (-)ENTREZGENE
CHM1_111104,747,902 - 104,776,824 (-)NCBI
T2T-CHM13v2.011104,998,332 - 105,027,245 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001136110   ⟹   NP_001129582
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811104,994,243 - 105,023,168 (-)NCBI
GRCh3711104,864,967 - 104,893,895 (-)ENTREZGENE
HuRef11100,795,913 - 100,824,883 (-)ENTREZGENE
CHM1_111104,747,902 - 104,776,824 (-)NCBI
T2T-CHM13v2.011104,998,332 - 105,027,245 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001136112   ⟹   NP_001129584
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811104,994,243 - 105,023,168 (-)NCBI
GRCh3711104,864,967 - 104,893,895 (-)ENTREZGENE
HuRef11100,795,913 - 100,824,883 (-)ENTREZGENE
CHM1_111104,747,902 - 104,776,824 (-)NCBI
T2T-CHM13v2.011104,998,332 - 105,027,245 (-)NCBI
Sequence:
RefSeq Acc Id: NM_004347   ⟹   NP_004338
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811104,994,243 - 105,023,168 (-)NCBI
GRCh3711104,864,967 - 104,893,895 (-)ENTREZGENE
Build 3611104,370,180 - 104,384,909 (-)NCBI Archive
HuRef11100,795,913 - 100,824,883 (-)ENTREZGENE
CHM1_111104,747,902 - 104,776,824 (-)NCBI
T2T-CHM13v2.011104,998,332 - 105,027,245 (-)NCBI
Sequence:
RefSeq Acc Id: NR_024239
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811104,994,243 - 105,023,168 (-)NCBI
GRCh3711104,864,967 - 104,893,895 (-)ENTREZGENE
HuRef11100,795,913 - 100,824,883 (-)ENTREZGENE
CHM1_111104,747,902 - 104,776,824 (-)NCBI
T2T-CHM13v2.011104,998,332 - 105,027,245 (-)NCBI
Sequence:
RefSeq Acc Id: NR_036562
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811104,994,243 - 105,023,168 (-)NCBI
GRCh3711104,864,967 - 104,893,895 (-)ENTREZGENE
HuRef11100,795,913 - 100,824,883 (-)ENTREZGENE
CHM1_111104,747,902 - 104,776,824 (-)NCBI
T2T-CHM13v2.011104,998,332 - 105,027,245 (-)NCBI
Sequence:
1 to 5 of 13 rows
1 to 5 of 13 rows
RefSeq Acc Id: NP_001129582   ⟸   NM_001136110
- Peptide Label: isoform c
- UniProtKB: P51878 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001129581   ⟸   NM_001136109
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_004338   ⟸   NM_004347
- Peptide Label: isoform a precursor
- UniProtKB: Q1HBJ3 (UniProtKB/Swiss-Prot),   Q14DD6 (UniProtKB/Swiss-Prot),   Q0QVZ2 (UniProtKB/Swiss-Prot),   Q0QVZ1 (UniProtKB/Swiss-Prot),   Q0QVZ0 (UniProtKB/Swiss-Prot),   Q0QVY8 (UniProtKB/Swiss-Prot),   Q0QVY7 (UniProtKB/Swiss-Prot),   B4DKP5 (UniProtKB/Swiss-Prot),   Q6DJV7 (UniProtKB/Swiss-Prot),   P51878 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001129584   ⟸   NM_001136112
- Peptide Label: isoform f
- Sequence:
Ensembl Acc Id: ENSP00000396053   ⟸   ENST00000438448
CARD   Caspase family p10

Name Modeler Protein Id AA Range Protein Structure
AF-P51878-F1-model_v2 AlphaFold P51878 1-434 view protein structure



1 to 40 of 69 rows
Database
Acc Id
Source(s)
COSMIC CASP5 COSMIC
Ensembl Genes ENSG00000137757 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000260315 ENTREZGENE
  ENST00000260315.8 UniProtKB/Swiss-Prot
  ENST00000393141 ENTREZGENE
  ENST00000393141.6 UniProtKB/Swiss-Prot
  ENST00000418434 ENTREZGENE
  ENST00000418434.5 UniProtKB/Swiss-Prot
  ENST00000444749 ENTREZGENE
  ENST00000444749.6 UniProtKB/Swiss-Prot
  ENST00000456200 ENTREZGENE
  ENST00000456200.5 UniProtKB/Swiss-Prot
  ENST00000526056.5 UniProtKB/Swiss-Prot
  ENST00000531367.5 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.1460 UniProtKB/Swiss-Prot
GTEx ENSG00000137757 GTEx
HGNC ID HGNC:1506 ENTREZGENE
Human Proteome Map CASP5 Human Proteome Map
InterPro CARD UniProtKB/Swiss-Prot
  Caspase-like_dom_sf UniProtKB/Swiss-Prot
  Caspase_cys_AS UniProtKB/Swiss-Prot
  Caspase_his_AS UniProtKB/Swiss-Prot
  DEATH-like_dom_sf UniProtKB/Swiss-Prot
  Pept_C14 UniProtKB/Swiss-Prot
  Pept_C14_caspase UniProtKB/Swiss-Prot
  Pept_C14_p10 UniProtKB/Swiss-Prot
  Pept_C14_p20 UniProtKB/Swiss-Prot
  Pept_C14A UniProtKB/Swiss-Prot
KEGG Report hsa:838 UniProtKB/Swiss-Prot
NCBI Gene 838 ENTREZGENE
OMIM 602665 OMIM
PANTHER CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 UniProtKB/Swiss-Prot
  CASPASE-1 UniProtKB/Swiss-Prot
Pfam CARD UniProtKB/Swiss-Prot
  Peptidase_C14 UniProtKB/Swiss-Prot
PharmGKB PA26089 PharmGKB
PIRSF Caspase_ICE UniProtKB/Swiss-Prot
PRINTS IL1BCENZYME UniProtKB/Swiss-Prot
PROSITE CARD UniProtKB/Swiss-Prot
  CASPASE_CYS UniProtKB/Swiss-Prot
1 to 40 of 69 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-08 CASP5  caspase 5    caspase 5, apoptosis-related cysteine peptidase  Symbol and/or name change 5135510 APPROVED