CORO7 (coronin 7) - Rat Genome Database

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Gene: CORO7 (coronin 7) Homo sapiens
Analyze
Symbol: CORO7
Name: coronin 7
RGD ID: 1351326
HGNC Page HGNC:26161
Description: Enables actin binding activity. Involved in Golgi to endosome transport; actin filament polymerization; and positive regulation of hippo signaling. Located in trans-Golgi network.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 0610011B16Rik; 70 kDa WD repeat tumor rejection antigen homolog; coronin-7; CRN7; FLJ22021; FLJ44188; POD1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38164,354,542 - 4,416,596 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl164,354,542 - 4,425,705 (-)EnsemblGRCh38hg38GRCh38
GRCh37164,404,543 - 4,466,597 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36164,344,546 - 4,406,572 (-)NCBINCBI36Build 36hg18NCBI36
Build 34164,344,545 - 4,406,572NCBI
Celera164,613,451 - 4,675,545 (-)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef164,371,719 - 4,434,225 (-)NCBIHuRef
CHM1_1164,404,317 - 4,466,705 (-)NCBICHM1_1
T2T-CHM13v2.0164,383,717 - 4,445,792 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:14702039   PMID:15327992   PMID:16344560   PMID:16905771   PMID:18581049   PMID:18925374   PMID:19946888   PMID:20379614   PMID:21130766   PMID:21873635  
PMID:22939629   PMID:24768539   PMID:25887538   PMID:25921289   PMID:26186194   PMID:26496610   PMID:27143109   PMID:27926873   PMID:28514442   PMID:28675297   PMID:29467282   PMID:29540532  
PMID:30196744   PMID:31073040   PMID:31091453   PMID:32513696   PMID:32807901   PMID:33111431   PMID:33162394   PMID:33961781   PMID:34079125   PMID:34672954   PMID:34795231   PMID:35102251  
PMID:35256949   PMID:35439318   PMID:35509820   PMID:35831314   PMID:36215168   PMID:37232246   PMID:38113892  


Genomics

Comparative Map Data
CORO7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38164,354,542 - 4,416,596 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl164,354,542 - 4,425,705 (-)EnsemblGRCh38hg38GRCh38
GRCh37164,404,543 - 4,466,597 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36164,344,546 - 4,406,572 (-)NCBINCBI36Build 36hg18NCBI36
Build 34164,344,545 - 4,406,572NCBI
Celera164,613,451 - 4,675,545 (-)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef164,371,719 - 4,434,225 (-)NCBIHuRef
CHM1_1164,404,317 - 4,466,705 (-)NCBICHM1_1
T2T-CHM13v2.0164,383,717 - 4,445,792 (-)NCBIT2T-CHM13v2.0
Coro7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39164,444,748 - 4,497,584 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl164,443,997 - 4,497,641 (-)EnsemblGRCm39 Ensembl
GRCm38164,626,884 - 4,679,720 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl164,626,133 - 4,679,777 (-)EnsemblGRCm38mm10GRCm38
MGSCv37164,626,884 - 4,679,720 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36164,541,385 - 4,594,953 (-)NCBIMGSCv36mm8
Celera165,256,351 - 5,310,394 (-)NCBICelera
Cytogenetic Map16A1NCBI
cM Map162.45NCBI
Coro7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81011,386,683 - 11,447,422 (+)NCBIGRCr8
mRatBN7.21010,880,299 - 10,941,001 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1010,885,196 - 10,941,001 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1015,593,979 - 15,649,691 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01015,082,799 - 15,138,509 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01010,751,723 - 10,807,664 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01011,090,200 - 11,144,289 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1011,090,314 - 11,143,881 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1011,373,346 - 11,386,059 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0109,855,558 - 9,909,647 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41011,014,535 - 11,070,332 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11011,064,141 - 11,070,331 (+)NCBI
Celera109,847,444 - 9,903,260 (+)NCBICelera
Cytogenetic Map10q12NCBI
Coro7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544213,009,977 - 13,084,355 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544213,010,032 - 13,084,897 (+)NCBIChiLan1.0ChiLan1.0
CORO7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2184,886,183 - 4,956,461 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1168,675,872 - 8,746,135 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0163,281,481 - 3,342,937 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1164,448,849 - 4,515,036 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl164,418,006 - 4,515,038 (-)Ensemblpanpan1.1panPan2
LOC102152446
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1636,980,302 - 37,038,210 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha638,308,608 - 38,367,127 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0637,184,561 - 37,243,147 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl637,184,569 - 37,252,759 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1636,978,828 - 37,037,380 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0636,872,005 - 36,930,546 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0637,273,280 - 37,331,846 (+)NCBIUU_Cfam_GSD_1.0
Coro7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344106,557,388 - 106,613,370 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493669496,110 - 152,133 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493669496,107 - 152,075 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC103227636
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.154,034,282 - 4,098,554 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl54,020,116 - 4,098,328 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606826,591,274 - 26,657,278 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in CORO7
56 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 16p13.3(chr16:3710449-4644951)x3 copy number gain See cases [RCV000050956] Chr16:3710449..4644951 [GRCh38]
Chr16:3760450..4694952 [GRCh37]
Chr16:3700451..4634953 [NCBI36]
Chr16:16p13.3
uncertain significance
GRCh38/hg38 16p13.3-13.13(chr16:23141-11296695)x3 copy number gain See cases [RCV000052367] Chr16:23141..11296695 [GRCh38]
Chr16:73141..11390552 [GRCh37]
Chr16:13141..11298053 [NCBI36]
Chr16:16p13.3-13.13
pathogenic
GRCh38/hg38 16p13.3(chr16:2850734-7110697)x1 copy number loss See cases [RCV000053270] Chr16:2850734..7110697 [GRCh38]
Chr16:2900735..7160698 [GRCh37]
Chr16:2840736..7100699 [NCBI36]
Chr16:16p13.3
pathogenic
NM_001201472.1(CORO7):c.1272C>T (p.Ser424=) single nucleotide variant Malignant melanoma [RCV000071129] Chr16:4362688 [GRCh38]
Chr16:4412689 [GRCh37]
Chr16:4352690 [NCBI36]
Chr16:16p13.3
not provided
GRCh38/hg38 16p13.3-13.13(chr16:46766-11525516)x3 copy number gain See cases [RCV000133780] Chr16:46766..11525516 [GRCh38]
Chr16:96766..11619372 [GRCh37]
Chr16:36766..11526873 [NCBI36]
Chr16:16p13.3-13.13
pathogenic
NM_024535.5(CORO7):c.2772+50C>T single nucleotide variant Acute megakaryoblastic leukemia [RCV000202599] Chr16:4355236 [GRCh38]
Chr16:4405237 [GRCh37]
Chr16:16p13.3
uncertain significance
GRCh38/hg38 16p13.3(chr16:3820522-4668347)x1 copy number loss See cases [RCV000137768] Chr16:3820522..4668347 [GRCh38]
Chr16:3870523..4718348 [GRCh37]
Chr16:3810524..4658349 [NCBI36]
Chr16:16p13.3
pathogenic|likely pathogenic
GRCh38/hg38 16p13.3-13.12(chr16:43732-13326806)x3 copy number gain See cases [RCV000139166] Chr16:43732..13326806 [GRCh38]
Chr16:93732..13420663 [GRCh37]
Chr16:33732..13328164 [NCBI36]
Chr16:16p13.3-13.12
pathogenic
GRCh38/hg38 16p13.3(chr16:3726702-4644961)x3 copy number gain See cases [RCV000142504] Chr16:3726702..4644961 [GRCh38]
Chr16:3776703..4694962 [GRCh37]
Chr16:3716704..4634963 [NCBI36]
Chr16:16p13.3
pathogenic
GRCh38/hg38 16p13.3-13.11(chr16:666662-15743104)x3 copy number gain See cases [RCV000143710] Chr16:666662..15743104 [GRCh38]
Chr16:716662..15836961 [GRCh37]
Chr16:656663..15744462 [NCBI36]
Chr16:16p13.3-13.11
pathogenic
GRCh37/hg19 16p13.3-11.2(chr16:102839-28327676)x3 copy number gain See cases [RCV000203445] Chr16:102839..28327676 [GRCh37]
Chr16:16p13.3-11.2
pathogenic
GRCh37/hg19 16p13.3-11.2(chr16:1279324-31926800)x3 copy number gain Ductal breast carcinoma [RCV000207053] Chr16:1279324..31926800 [GRCh37]
Chr16:16p13.3-11.2
uncertain significance
GRCh37/hg19 16p13.3-12.3(chr16:1274615-19073133)x3 copy number gain Ductal breast carcinoma [RCV000207326] Chr16:1274615..19073133 [GRCh37]
Chr16:16p13.3-12.3
uncertain significance
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 copy number gain See cases [RCV000446684] Chr16:69193..90274381 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-13.2(chr16:78801-9169448) copy number gain See cases [RCV000446555] Chr16:78801..9169448 [GRCh37]
Chr16:16p13.3-13.2
pathogenic
GRCh37/hg19 16p13.3(chr16:97133-5122974)x3 copy number gain See cases [RCV000445663] Chr16:97133..5122974 [GRCh37]
Chr16:16p13.3
pathogenic
maternal UPD(16p) complex Hemimegalencephaly [RCV000494707] Chr16:1280042..33710558 [GRCh37]
Chr16:16p13.3-11.2
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) copy number gain See cases [RCV000511296] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3(chr16:3146027-6362229)x1 copy number loss See cases [RCV000511703] Chr16:3146027..6362229 [GRCh37]
Chr16:16p13.3
pathogenic
NM_138440.3(VASN):c.641G>A (p.Arg214His) single nucleotide variant Inborn genetic diseases [RCV003301771] Chr16:4381518 [GRCh38]
Chr16:4431519 [GRCh37]
Chr16:16p13.3
uncertain significance
GRCh37/hg19 16p13.3-12.2(chr16:85880-22442007)x3 copy number gain See cases [RCV000511360] Chr16:85880..22442007 [GRCh37]
Chr16:16p13.3-12.2
pathogenic
NM_024535.5(CORO7):c.964G>A (p.Val322Ile) single nucleotide variant Inborn genetic diseases [RCV003283653] Chr16:4364855 [GRCh38]
Chr16:4414856 [GRCh37]
Chr16:16p13.3
uncertain significance
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 copy number gain See cases [RCV000512138] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-13.2(chr16:85880-9883129)x3 copy number gain See cases [RCV000510698] Chr16:85880..9883129 [GRCh37]
Chr16:16p13.3-13.2
pathogenic
NM_138440.3(VASN):c.1154C>T (p.Pro385Leu) single nucleotide variant Inborn genetic diseases [RCV003255013] Chr16:4382031 [GRCh38]
Chr16:4432032 [GRCh37]
Chr16:16p13.3
uncertain significance
GRCh37/hg19 16p13.3(chr16:2891391-4440397)x3 copy number gain See cases [RCV000511502] Chr16:2891391..4440397 [GRCh37]
Chr16:16p13.3
uncertain significance
GRCh37/hg19 16p13.3-12.3(chr16:85880-19806921)x3 copy number gain See cases [RCV000512194] Chr16:85880..19806921 [GRCh37]
Chr16:16p13.3-12.3
pathogenic
GRCh37/hg19 16p13.3(chr16:2651354-4460114)x3 copy number gain not provided [RCV000683747] Chr16:2651354..4460114 [GRCh37]
Chr16:16p13.3
pathogenic
GRCh37/hg19 16p13.3(chr16:1505184-4415346)x3 copy number gain not provided [RCV000683745] Chr16:1505184..4415346 [GRCh37]
Chr16:16p13.3
pathogenic
GRCh37/hg19 16p13.3-13.13(chr16:85880-11209288)x3 copy number gain not provided [RCV000683743] Chr16:85880..11209288 [GRCh37]
Chr16:16p13.3-13.13
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 copy number gain not provided [RCV000738918] Chr16:88165..90274695 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 copy number gain not provided [RCV000738915] Chr16:61451..90294632 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 copy number gain not provided [RCV000738917] Chr16:88165..90163275 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3(chr16:4367730-4445327)x3 copy number gain not provided [RCV000751554] Chr16:4367730..4445327 [GRCh37]
Chr16:16p13.3
benign
NM_024535.5(CORO7):c.578G>A (p.Arg193Gln) single nucleotide variant not provided [RCV001612492] Chr16:4395326 [GRCh38]
Chr16:4445327 [GRCh37]
Chr16:16p13.3
benign
NM_138440.3(VASN):c.1304G>T (p.Gly435Val) single nucleotide variant Inborn genetic diseases [RCV003244784] Chr16:4382181 [GRCh38]
Chr16:4432182 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_024535.5(CORO7):c.2218C>T (p.Pro740Ser) single nucleotide variant not provided [RCV000967403] Chr16:4359512 [GRCh38]
Chr16:4409513 [GRCh37]
Chr16:16p13.3
benign
NM_138440.3(VASN):c.705C>T (p.Ile235=) single nucleotide variant not provided [RCV000883436] Chr16:4381582 [GRCh38]
Chr16:4431583 [GRCh37]
Chr16:16p13.3
benign
NC_000016.10:g.(?_3727698)_(4802591_?)del deletion Rubinstein-Taybi syndrome [RCV000813975] Chr16:3727698..4802591 [GRCh38]
Chr16:3777699..4852592 [GRCh37]
Chr16:16p13.3
pathogenic
GRCh37/hg19 16p13.3(chr16:2651354-4614965)x3 copy number gain not provided [RCV001006745] Chr16:2651354..4614965 [GRCh37]
Chr16:16p13.3
pathogenic
GRCh37/hg19 16p13.3(chr16:3731117-5325699)x3 copy number gain not provided [RCV000846351] Chr16:3731117..5325699 [GRCh37]
Chr16:16p13.3
pathogenic
GRCh37/hg19 16p13.3(chr16:4382314-4511029)x1 copy number loss not provided [RCV000848810] Chr16:4382314..4511029 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_024535.5(CORO7):c.394C>T (p.Leu132=) single nucleotide variant not provided [RCV000955503] Chr16:4407594 [GRCh38]
Chr16:4457595 [GRCh37]
Chr16:16p13.3
benign
NC_000016.10:g.(?_3727698)_(4802591_?)dup duplication Amelocerebrohypohidrotic syndrome [RCV001031942] Chr16:3777699..4852592 [GRCh37]
Chr16:16p13.3
uncertain significance
GRCh37/hg19 16p13.3-11.2(chr16:4380767-30445350)x3 copy number gain not provided [RCV002472599] Chr16:4380767..30445350 [GRCh37]
Chr16:16p13.3-11.2
pathogenic
GRCh37/hg19 16p13.3(chr16:84485-5251013)x3 copy number gain not provided [RCV001537890] Chr16:84485..5251013 [GRCh37]
Chr16:16p13.3
pathogenic
GRCh37/hg19 16p13.3-11.2(chr16:2959279-30190593)x3 copy number gain See cases [RCV001263169] Chr16:2959279..30190593 [GRCh37]
Chr16:16p13.3-11.2
pathogenic|likely pathogenic
GRCh37/hg19 16p13.3(chr16:85880-5249457)x3 copy number gain not provided [RCV001259749] Chr16:85880..5249457 [GRCh37]
Chr16:16p13.3
pathogenic
NC_000016.9:g.(?_3777699)_(4852592_?)dup duplication Kohlschutter's syndrome [RCV001305610] Chr16:3777699..4852592 [GRCh37]
Chr16:16p13.3
uncertain significance
NC_000016.9:g.(?_256302)_(5971108_?)dup duplication Familial Mediterranean fever [RCV001877532]|Fanconi anemia [RCV001877533]|not provided [RCV001877531] Chr16:256302..5971108 [GRCh37]
Chr16:16p13.3
uncertain significance
NC_000016.9:g.(?_256302)_(4852572_?)dup duplication Epilepsy [RCV003113403]|Idiopathic generalized epilepsy [RCV003109446]|Saldino-Mainzer syndrome [RCV003113404] Chr16:256302..4852572 [GRCh37]
Chr16:16p13.3
uncertain significance
NC_000016.9:g.(?_3293141)_(5971108_?)dup duplication Rubinstein-Taybi syndrome [RCV003113465] Chr16:3293141..5971108 [GRCh37]
Chr16:16p13.3
uncertain significance
NC_000016.10:g.3619617_4448281del deletion See cases [RCV003313806] Chr16:3619617..4448281 [GRCh38]
Chr16:16p13.3
pathogenic
GRCh37/hg19 16p13.3(chr16:111043-6627459)x3 copy number gain See cases [RCV002292215] Chr16:111043..6627459 [GRCh37]
Chr16:16p13.3
pathogenic
NM_138440.3(VASN):c.890G>A (p.Arg297His) single nucleotide variant Inborn genetic diseases [RCV002990172] Chr16:4381767 [GRCh38]
Chr16:4431768 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.974A>G (p.Glu325Gly) single nucleotide variant Inborn genetic diseases [RCV002860062] Chr16:4381851 [GRCh38]
Chr16:4431852 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1276C>T (p.His426Tyr) single nucleotide variant Inborn genetic diseases [RCV002752119] Chr16:4382153 [GRCh38]
Chr16:4432154 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.253C>A (p.Gln85Lys) single nucleotide variant Inborn genetic diseases [RCV002685296] Chr16:4381130 [GRCh38]
Chr16:4431131 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1750G>A (p.Ala584Thr) single nucleotide variant Inborn genetic diseases [RCV002970513] Chr16:4382627 [GRCh38]
Chr16:4432628 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.602G>T (p.Gly201Val) single nucleotide variant Inborn genetic diseases [RCV002778268] Chr16:4381479 [GRCh38]
Chr16:4431480 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.538A>C (p.Ser180Arg) single nucleotide variant Inborn genetic diseases [RCV002689849] Chr16:4381415 [GRCh38]
Chr16:4431416 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.302A>T (p.Asn101Ile) single nucleotide variant Inborn genetic diseases [RCV002925177] Chr16:4381179 [GRCh38]
Chr16:4431180 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.410G>A (p.Arg137His) single nucleotide variant Inborn genetic diseases [RCV002707483] Chr16:4381287 [GRCh38]
Chr16:4431288 [GRCh37]
Chr16:16p13.3
likely benign
NM_138440.3(VASN):c.565C>G (p.Leu189Val) single nucleotide variant Inborn genetic diseases [RCV002821214] Chr16:4381442 [GRCh38]
Chr16:4431443 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1711G>A (p.Glu571Lys) single nucleotide variant Inborn genetic diseases [RCV002693356] Chr16:4382588 [GRCh38]
Chr16:4432589 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1394C>T (p.Thr465Ile) single nucleotide variant Inborn genetic diseases [RCV002660186] Chr16:4382271 [GRCh38]
Chr16:4432272 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1461C>G (p.Ser487Arg) single nucleotide variant Inborn genetic diseases [RCV002887020] Chr16:4382338 [GRCh38]
Chr16:4432339 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1273C>T (p.Arg425Trp) single nucleotide variant Inborn genetic diseases [RCV003001276] Chr16:4382150 [GRCh38]
Chr16:4432151 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.412C>T (p.His138Tyr) single nucleotide variant Inborn genetic diseases [RCV002743209] Chr16:4381289 [GRCh38]
Chr16:4431290 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1862C>T (p.Pro621Leu) single nucleotide variant Inborn genetic diseases [RCV002713430] Chr16:4382739 [GRCh38]
Chr16:4432740 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.67G>A (p.Gly23Ser) single nucleotide variant Inborn genetic diseases [RCV002713661] Chr16:4380944 [GRCh38]
Chr16:4430945 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1908G>T (p.Lys636Asn) single nucleotide variant Inborn genetic diseases [RCV003004806] Chr16:4382785 [GRCh38]
Chr16:4432786 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.770C>T (p.Pro257Leu) single nucleotide variant Inborn genetic diseases [RCV002698749] Chr16:4381647 [GRCh38]
Chr16:4431648 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.992C>A (p.Pro331Gln) single nucleotide variant Inborn genetic diseases [RCV002930818] Chr16:4381869 [GRCh38]
Chr16:4431870 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.409C>T (p.Arg137Cys) single nucleotide variant Inborn genetic diseases [RCV002809265] Chr16:4381286 [GRCh38]
Chr16:4431287 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1606A>G (p.Met536Val) single nucleotide variant Inborn genetic diseases [RCV002670272] Chr16:4382483 [GRCh38]
Chr16:4432484 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.646C>T (p.Arg216Cys) single nucleotide variant Inborn genetic diseases [RCV002648531] Chr16:4381523 [GRCh38]
Chr16:4431524 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1651G>A (p.Gly551Arg) single nucleotide variant Inborn genetic diseases [RCV002989609] Chr16:4382528 [GRCh38]
Chr16:4432529 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_024535.5(CORO7):c.1802G>A (p.Arg601His) single nucleotide variant Inborn genetic diseases [RCV002748339] Chr16:4361058 [GRCh38]
Chr16:4411059 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.379G>C (p.Glu127Gln) single nucleotide variant Inborn genetic diseases [RCV002989706] Chr16:4381256 [GRCh38]
Chr16:4431257 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_024535.5(CORO7):c.148G>A (p.Asp50Asn) single nucleotide variant Inborn genetic diseases [RCV002854948] Chr16:4413317 [GRCh38]
Chr16:4463318 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1624C>T (p.Arg542Trp) single nucleotide variant Inborn genetic diseases [RCV002655601] Chr16:4382501 [GRCh38]
Chr16:4432502 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1625G>A (p.Arg542Gln) single nucleotide variant Inborn genetic diseases [RCV002679183] Chr16:4382502 [GRCh38]
Chr16:4432503 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1385G>A (p.Arg462Gln) single nucleotide variant Inborn genetic diseases [RCV002655540] Chr16:4382262 [GRCh38]
Chr16:4432263 [GRCh37]
Chr16:16p13.3
likely benign
NM_138440.3(VASN):c.1432G>A (p.Val478Met) single nucleotide variant Inborn genetic diseases [RCV002656061] Chr16:4382309 [GRCh38]
Chr16:4432310 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.298G>A (p.Ala100Thr) single nucleotide variant Inborn genetic diseases [RCV003175006] Chr16:4381175 [GRCh38]
Chr16:4431176 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.469G>A (p.Asp157Asn) single nucleotide variant Inborn genetic diseases [RCV003197810] Chr16:4381346 [GRCh38]
Chr16:4431347 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1085G>A (p.Arg362Lys) single nucleotide variant Inborn genetic diseases [RCV003190364] Chr16:4381962 [GRCh38]
Chr16:4431963 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1216C>T (p.Pro406Ser) single nucleotide variant Inborn genetic diseases [RCV003205924] Chr16:4382093 [GRCh38]
Chr16:4432094 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_024535.5(CORO7):c.2626C>T (p.Arg876Trp) single nucleotide variant Inborn genetic diseases [RCV003178863] Chr16:4357227 [GRCh38]
Chr16:4407228 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1304G>C (p.Gly435Ala) single nucleotide variant Inborn genetic diseases [RCV003302431] Chr16:4382181 [GRCh38]
Chr16:4432182 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1198G>A (p.Val400Ile) single nucleotide variant Inborn genetic diseases [RCV003261639] Chr16:4382075 [GRCh38]
Chr16:4432076 [GRCh37]
Chr16:16p13.3
likely benign
NM_138440.3(VASN):c.907G>A (p.Val303Met) single nucleotide variant Inborn genetic diseases [RCV003340379] Chr16:4381784 [GRCh38]
Chr16:4431785 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1687C>T (p.His563Tyr) single nucleotide variant Inborn genetic diseases [RCV003381027] Chr16:4382564 [GRCh38]
Chr16:4432565 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.865C>T (p.Arg289Cys) single nucleotide variant Inborn genetic diseases [RCV003386730] Chr16:4381742 [GRCh38]
Chr16:4431743 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1906A>G (p.Lys636Glu) single nucleotide variant Inborn genetic diseases [RCV003353882] Chr16:4382783 [GRCh38]
Chr16:4432784 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.1097G>A (p.Arg366Gln) single nucleotide variant Inborn genetic diseases [RCV003347054] Chr16:4381974 [GRCh38]
Chr16:4431975 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.445C>T (p.Arg149Cys) single nucleotide variant Inborn genetic diseases [RCV003354546] Chr16:4381322 [GRCh38]
Chr16:4431323 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_138440.3(VASN):c.442G>A (p.Asp148Asn) single nucleotide variant Inborn genetic diseases [RCV003375787] Chr16:4381319 [GRCh38]
Chr16:4431320 [GRCh37]
Chr16:16p13.3
uncertain significance
GRCh37/hg19 16p13.3(chr16:4462897-5172225)x3 copy number gain not provided [RCV003485087] Chr16:4462897..5172225 [GRCh37]
Chr16:16p13.3
uncertain significance
NM_024535.5(CORO7):c.888G>A (p.Ala296=) single nucleotide variant not provided [RCV003417618] Chr16:4365013 [GRCh38]
Chr16:4415014 [GRCh37]
Chr16:16p13.3
likely benign
NM_138440.3(VASN):c.1280A>G (p.His427Arg) single nucleotide variant Inborn genetic diseases [RCV003344735] Chr16:4382157 [GRCh38]
Chr16:4432158 [GRCh37]
Chr16:16p13.3
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:13701
Count of miRNA genes:1282
Interacting mature miRNAs:1692
Transcripts:ENST00000251166, ENST00000423908, ENST00000537233, ENST00000539968, ENST00000570645, ENST00000570779, ENST00000570928, ENST00000571052, ENST00000571059, ENST00000571227, ENST00000571756, ENST00000572026, ENST00000572044, ENST00000572125, ENST00000572140, ENST00000572153, ENST00000572518, ENST00000572549, ENST00000572666, ENST00000572898, ENST00000573165, ENST00000573245, ENST00000573773, ENST00000574025, ENST00000574311, ENST00000574849, ENST00000575038, ENST00000575531, ENST00000575714, ENST00000575850, ENST00000576051, ENST00000576437, ENST00000576457, ENST00000576637, ENST00000577144
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D6S1566  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37647,627,964 - 47,628,137UniSTSGRCh37
Build 36647,735,923 - 47,736,096RGDNCBI36
Celera649,184,032 - 49,184,205RGD
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map16pUniSTS
HuRef647,355,717 - 47,355,864UniSTS
Marshfield Genetic Map673.13UniSTS
Marshfield Genetic Map673.13RGD
Genethon Genetic Map672.2UniSTS
deCODE Assembly Map673.07UniSTS
Cda1eg08  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37164,404,639 - 4,404,781UniSTSGRCh37
Build 36164,344,640 - 4,344,782RGDNCBI36
Celera164,613,547 - 4,613,689RGD
Cytogenetic Map16p13.3UniSTS
HuRef164,371,815 - 4,371,957UniSTS
GeneMap99-GB4 RH Map1672.02UniSTS
SHGC-56815  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37164,433,268 - 4,433,430UniSTSGRCh37
Build 36164,373,269 - 4,373,431RGDNCBI36
Celera164,642,175 - 4,642,337RGD
Cytogenetic Map16p13.3UniSTS
HuRef164,400,437 - 4,400,599UniSTS
TNG Radiation Hybrid Map162604.0UniSTS
RH69410  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37164,407,784 - 4,407,911UniSTSGRCh37
Build 36164,347,785 - 4,347,912RGDNCBI36
Celera164,616,691 - 4,616,818RGD
Cytogenetic Map16p13.3UniSTS
HuRef164,374,955 - 4,375,082UniSTS
GeneMap99-GB4 RH Map1662.56UniSTS
D1S3690  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1p33UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map3p25UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map13q22.2UniSTS
Cytogenetic Map12q13.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map9q33UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map14q31-q32.1UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
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Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS
MARC_3453-3454:996679102:1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37164,411,375 - 4,412,116UniSTSGRCh37
Celera164,620,282 - 4,621,023UniSTS
HuRef164,378,545 - 4,379,286UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 1821 1929 1131 116 1402 5 2788 733 2527 63 950 1228 111 1116 1728
Low 610 1053 587 501 545 454 1565 1454 1181 351 496 379 59 88 1060 4
Below cutoff 1 2 5 5 1 5 2 6 4 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_052966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001201472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001201473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001351729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_024535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC004789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC012676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK025674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK094596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK097238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK126176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM671637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA094935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA234977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA944874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DR155527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000251166   ⟹   ENSP00000251166
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,354,542 - 4,416,596 (-)Ensembl
RefSeq Acc Id: ENST00000537233   ⟹   ENSP00000440460
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,354,601 - 4,416,629 (-)Ensembl
RefSeq Acc Id: ENST00000570645   ⟹   ENSP00000460901
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,388,607 - 4,416,626 (-)Ensembl
RefSeq Acc Id: ENST00000570779   ⟹   ENSP00000460956
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,355,080 - 4,358,450 (-)Ensembl
RefSeq Acc Id: ENST00000570928   ⟹   ENSP00000460199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,395,319 - 4,416,595 (-)Ensembl
RefSeq Acc Id: ENST00000571052   ⟹   ENSP00000459085
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,388,576 - 4,416,597 (-)Ensembl
RefSeq Acc Id: ENST00000571059   ⟹   ENSP00000460036
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,388,013 - 4,416,629 (-)Ensembl
RefSeq Acc Id: ENST00000571227   ⟹   ENSP00000458459
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,354,544 - 4,416,627 (-)Ensembl
RefSeq Acc Id: ENST00000571756   ⟹   ENSP00000458828
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,361,690 - 4,416,596 (-)Ensembl
RefSeq Acc Id: ENST00000572026
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,407,525 - 4,415,897 (-)Ensembl
RefSeq Acc Id: ENST00000572044   ⟹   ENSP00000458411
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,364,830 - 4,416,596 (-)Ensembl
RefSeq Acc Id: ENST00000572125
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,358,850 - 4,359,624 (-)Ensembl
RefSeq Acc Id: ENST00000572140
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,416,725 - 4,425,523 (-)Ensembl
RefSeq Acc Id: ENST00000572153   ⟹   ENSP00000461051
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,405,471 - 4,416,579 (-)Ensembl
RefSeq Acc Id: ENST00000572518
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,408,186 - 4,412,936 (-)Ensembl
RefSeq Acc Id: ENST00000572549   ⟹   ENSP00000459286
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,364,652 - 4,416,929 (-)Ensembl
RefSeq Acc Id: ENST00000572666
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,358,442 - 4,361,902 (-)Ensembl
RefSeq Acc Id: ENST00000572898   ⟹   ENSP00000458935
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,405,510 - 4,416,627 (-)Ensembl
RefSeq Acc Id: ENST00000573165   ⟹   ENSP00000459401
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,416,461 - 4,425,705 (-)Ensembl
RefSeq Acc Id: ENST00000573245
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,387,765 - 4,395,340 (-)Ensembl
RefSeq Acc Id: ENST00000573773
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,361,650 - 4,364,571 (-)Ensembl
RefSeq Acc Id: ENST00000574025   ⟹   ENSP00000461702
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,354,964 - 4,416,627 (-)Ensembl
RefSeq Acc Id: ENST00000574311   ⟹   ENSP00000461187
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,360,278 - 4,416,596 (-)Ensembl
RefSeq Acc Id: ENST00000574849
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,357,764 - 4,359,328 (-)Ensembl
RefSeq Acc Id: ENST00000575038   ⟹   ENSP00000461797
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,388,582 - 4,416,930 (-)Ensembl
RefSeq Acc Id: ENST00000575531
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,356,432 - 4,363,228 (-)Ensembl
RefSeq Acc Id: ENST00000575714
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,357,375 - 4,407,577 (-)Ensembl
RefSeq Acc Id: ENST00000575850   ⟹   ENSP00000460910
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,395,323 - 4,416,929 (-)Ensembl
RefSeq Acc Id: ENST00000576051   ⟹   ENSP00000459888
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,405,523 - 4,413,489 (-)Ensembl
RefSeq Acc Id: ENST00000576437   ⟹   ENSP00000459228
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,360,445 - 4,416,626 (-)Ensembl
RefSeq Acc Id: ENST00000576457
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,405,544 - 4,414,426 (-)Ensembl
RefSeq Acc Id: ENST00000576637   ⟹   ENSP00000460177
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,354,968 - 4,359,627 (-)Ensembl
RefSeq Acc Id: ENST00000577144
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl164,405,545 - 4,415,933 (-)Ensembl
RefSeq Acc Id: NM_001201472   ⟹   NP_001188401
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38164,354,542 - 4,416,596 (-)NCBI
GRCh37164,404,543 - 4,466,962 (-)ENTREZGENE
HuRef164,371,719 - 4,434,225 (-)ENTREZGENE
CHM1_1164,404,317 - 4,466,705 (-)NCBI
T2T-CHM13v2.0164,383,717 - 4,445,792 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001201473   ⟹   NP_001188402
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38164,354,542 - 4,416,596 (-)NCBI
GRCh37164,404,543 - 4,466,962 (-)ENTREZGENE
HuRef164,371,719 - 4,434,225 (-)ENTREZGENE
CHM1_1164,404,317 - 4,466,705 (-)NCBI
T2T-CHM13v2.0164,383,717 - 4,445,792 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001351729   ⟹   NP_001338658
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38164,354,542 - 4,415,897 (-)NCBI
T2T-CHM13v2.0164,383,717 - 4,445,093 (-)NCBI
Sequence:
RefSeq Acc Id: NM_024535   ⟹   NP_078811
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38164,354,542 - 4,416,596 (-)NCBI
GRCh37164,404,543 - 4,466,962 (-)ENTREZGENE
Build 36164,344,546 - 4,406,572 (-)NCBI Archive
Celera164,613,451 - 4,675,545 (-)RGD
HuRef164,371,719 - 4,434,225 (-)ENTREZGENE
CHM1_1164,404,317 - 4,466,705 (-)NCBI
T2T-CHM13v2.0164,383,717 - 4,445,792 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001188401 (Get FASTA)   NCBI Sequence Viewer  
  NP_001188402 (Get FASTA)   NCBI Sequence Viewer  
  NP_001338658 (Get FASTA)   NCBI Sequence Viewer  
  NP_078811 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI17290 (Get FASTA)   NCBI Sequence Viewer  
  AAI17292 (Get FASTA)   NCBI Sequence Viewer  
  BAB15211 (Get FASTA)   NCBI Sequence Viewer  
  BAG52896 (Get FASTA)   NCBI Sequence Viewer  
  BAG53439 (Get FASTA)   NCBI Sequence Viewer  
  BAG57397 (Get FASTA)   NCBI Sequence Viewer  
  BAG59311 (Get FASTA)   NCBI Sequence Viewer  
  BAG59380 (Get FASTA)   NCBI Sequence Viewer  
  BAG64414 (Get FASTA)   NCBI Sequence Viewer  
  EAW85307 (Get FASTA)   NCBI Sequence Viewer  
  EAW85308 (Get FASTA)   NCBI Sequence Viewer  
  EAW85310 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000251166
  ENSP00000251166.4
  ENSP00000440460
  ENSP00000440460.2
  ENSP00000458411.1
  ENSP00000458459.1
  ENSP00000458828.1
  ENSP00000458935.1
  ENSP00000459085.1
  ENSP00000459228.1
  ENSP00000459286.1
  ENSP00000459401.1
  ENSP00000459888.1
  ENSP00000460036.1
  ENSP00000460177.1
  ENSP00000460199.1
  ENSP00000460901.1
  ENSP00000460910.1
  ENSP00000460956.1
  ENSP00000461051.1
  ENSP00000461187.1
  ENSP00000461702
  ENSP00000461702.1
  ENSP00000461797.1
  ENSP00000482646.1
  ENSP00000483187.2
  ENSP00000487636.1
  ENSP00000487652.1
  ENSP00000487794.1
  ENSP00000487921.1
  ENSP00000487981.1
  ENSP00000488061.1
  ENSP00000488122.1
  ENSP00000488149.1
  ENSP00000488164.1
  ENSP00000488250.1
  ENSP00000488278.1
  ENSP00000488375.1
  ENSP00000488416.1
  ENSP00000488425.1
  ENSP00000488426.1
  ENSP00000488553.1
  ENSP00000488571.1
  ENSP00000488658.1
  ENSP00000488867.1
GenBank Protein P57737 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_078811   ⟸   NM_024535
- Peptide Label: isoform 1
- UniProtKB: I3L416 (UniProtKB/Swiss-Prot),   B4DL18 (UniProtKB/Swiss-Prot),   B4DFD6 (UniProtKB/Swiss-Prot),   Q17RK4 (UniProtKB/Swiss-Prot),   P57737 (UniProtKB/Swiss-Prot),   B4DKU9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001188402   ⟸   NM_001201473
- Peptide Label: isoform 3
- UniProtKB: B4DKU9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001188401   ⟸   NM_001201472
- Peptide Label: isoform 2
- UniProtKB: B4DKU9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001338658   ⟸   NM_001351729
- Peptide Label: isoform 4
- UniProtKB: B3KSY4 (UniProtKB/TrEMBL),   B3KUH7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000460956   ⟸   ENST00000570779
RefSeq Acc Id: ENSP00000460901   ⟸   ENST00000570645
RefSeq Acc Id: ENSP00000460199   ⟸   ENST00000570928
RefSeq Acc Id: ENSP00000458459   ⟸   ENST00000571227
RefSeq Acc Id: ENSP00000460036   ⟸   ENST00000571059
RefSeq Acc Id: ENSP00000459085   ⟸   ENST00000571052
RefSeq Acc Id: ENSP00000458828   ⟸   ENST00000571756
RefSeq Acc Id: ENSP00000459286   ⟸   ENST00000572549
RefSeq Acc Id: ENSP00000458935   ⟸   ENST00000572898
RefSeq Acc Id: ENSP00000458411   ⟸   ENST00000572044
RefSeq Acc Id: ENSP00000461051   ⟸   ENST00000572153
RefSeq Acc Id: ENSP00000459401   ⟸   ENST00000573165
RefSeq Acc Id: ENSP00000461187   ⟸   ENST00000574311
RefSeq Acc Id: ENSP00000461702   ⟸   ENST00000574025
RefSeq Acc Id: ENSP00000461797   ⟸   ENST00000575038
RefSeq Acc Id: ENSP00000460910   ⟸   ENST00000575850
RefSeq Acc Id: ENSP00000459888   ⟸   ENST00000576051
RefSeq Acc Id: ENSP00000459228   ⟸   ENST00000576437
RefSeq Acc Id: ENSP00000440460   ⟸   ENST00000537233
RefSeq Acc Id: ENSP00000460177   ⟸   ENST00000576637
RefSeq Acc Id: ENSP00000251166   ⟸   ENST00000251166
Protein Domains
DUF1899

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P57737-F1-model_v2 AlphaFold P57737 1-925 view protein structure

Promoters
RGD ID:6810911
Promoter ID:HG_ACW:28887
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:CORO7ANDMAGMAS.HAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 36164,378,251 - 4,378,751 (-)MPROMDB
RGD ID:6792948
Promoter ID:HG_KWN:22923
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:UC002CWE.1,   UC002CWI.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36164,397,741 - 4,398,342 (-)MPROMDB
RGD ID:6810914
Promoter ID:HG_ACW:28889
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:CORO7ANDMAGMAS.PAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 36164,404,306 - 4,404,806 (-)MPROMDB
RGD ID:6792928
Promoter ID:HG_KWN:22924
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_12Hour,   CD4+TCell_2Hour,   K562,   Lymphoblastoid,   NB4
Transcripts:UC002CWG.2
Position:
Human AssemblyChrPosition (strand)Source
Build 36164,405,621 - 4,406,121 (-)MPROMDB
RGD ID:6792927
Promoter ID:HG_KWN:22925
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:UC002CWF.1,   UC002CWH.2,   UC010BTP.1,   UC010BTR.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36164,406,401 - 4,406,901 (-)MPROMDB
RGD ID:7231201
Promoter ID:EPDNEW_H21347
Type:single initiation site
Name:CORO7_2
Description:coronin 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H21348  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38164,407,771 - 4,407,831EPDNEW
RGD ID:7231207
Promoter ID:EPDNEW_H21348
Type:initiation region
Name:CORO7_1
Description:coronin 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H21347  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38164,416,596 - 4,416,656EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:26161 AgrOrtholog
COSMIC CORO7 COSMIC
Ensembl Genes ENSG00000262246 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSG00000282725 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000251166 ENTREZGENE
  ENST00000251166.9 UniProtKB/Swiss-Prot
  ENST00000537233 ENTREZGENE
  ENST00000537233.6 UniProtKB/Swiss-Prot
  ENST00000570645.5 UniProtKB/TrEMBL
  ENST00000570779.1 UniProtKB/TrEMBL
  ENST00000570928.5 UniProtKB/TrEMBL
  ENST00000571052.5 UniProtKB/TrEMBL
  ENST00000571059.5 UniProtKB/TrEMBL
  ENST00000571227.5 UniProtKB/TrEMBL
  ENST00000571756.5 UniProtKB/TrEMBL
  ENST00000572044.1 UniProtKB/TrEMBL
  ENST00000572153.5 UniProtKB/TrEMBL
  ENST00000572549.5 UniProtKB/TrEMBL
  ENST00000572898.1 UniProtKB/TrEMBL
  ENST00000573165.1 UniProtKB/TrEMBL
  ENST00000574025 ENTREZGENE
  ENST00000574025.5 UniProtKB/Swiss-Prot
  ENST00000574311.5 UniProtKB/TrEMBL
  ENST00000575038.5 UniProtKB/TrEMBL
  ENST00000575850.5 UniProtKB/TrEMBL
  ENST00000576051.5 UniProtKB/TrEMBL
  ENST00000576437.5 UniProtKB/TrEMBL
  ENST00000576637.1 UniProtKB/TrEMBL
  ENST00000614702.4 UniProtKB/Swiss-Prot
  ENST00000617235.2 UniProtKB/Swiss-Prot
  ENST00000631534.1 UniProtKB/Swiss-Prot
  ENST00000631578.1 UniProtKB/TrEMBL
  ENST00000631678.1 UniProtKB/TrEMBL
  ENST00000631757.1 UniProtKB/TrEMBL
  ENST00000631809.1 UniProtKB/TrEMBL
  ENST00000631960.1 UniProtKB/TrEMBL
  ENST00000632158.1 UniProtKB/TrEMBL
  ENST00000632164.1 UniProtKB/TrEMBL
  ENST00000632167.1 UniProtKB/TrEMBL
  ENST00000632177.1 UniProtKB/TrEMBL
  ENST00000632270.1 UniProtKB/TrEMBL
  ENST00000632515.1 UniProtKB/TrEMBL
  ENST00000632603.1 UniProtKB/TrEMBL
  ENST00000633070.1 UniProtKB/TrEMBL
  ENST00000633467.1 UniProtKB/TrEMBL
  ENST00000633681.1 UniProtKB/TrEMBL
  ENST00000633804.1 UniProtKB/TrEMBL
  ENST00000633889.1 UniProtKB/TrEMBL
  ENST00000634048.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000262246 GTEx
  ENSG00000282725 GTEx
HGNC ID HGNC:26161 ENTREZGENE
Human Proteome Map CORO7 Human Proteome Map
InterPro Coronin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF1899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G-protein_beta_WD-40_rep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:79585 UniProtKB/Swiss-Prot
NCBI Gene 79585 ENTREZGENE
OMIM 611668 OMIM
PANTHER PTHR10856 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10856:SF20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF1899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134910806 PharmGKB
PRINTS GPROTEINBRPT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE WD_REPEATS_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DUF1899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF1900 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Putative isomerase YbhE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF50978 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B3KSY4 ENTREZGENE, UniProtKB/TrEMBL
  B3KUH7 ENTREZGENE, UniProtKB/TrEMBL
  B4DFD6 ENTREZGENE
  B4DKU9 ENTREZGENE, UniProtKB/TrEMBL
  B4DL18 ENTREZGENE
  CORO7_HUMAN UniProtKB/Swiss-Prot
  E7EP81_HUMAN UniProtKB/TrEMBL
  I3L0X8_HUMAN UniProtKB/TrEMBL
  I3L0Z7_HUMAN UniProtKB/TrEMBL
  I3L1G9_HUMAN UniProtKB/TrEMBL
  I3L1M1_HUMAN UniProtKB/TrEMBL
  I3L1T5_HUMAN UniProtKB/TrEMBL
  I3L1Z1_HUMAN UniProtKB/TrEMBL
  I3L212_HUMAN UniProtKB/TrEMBL
  I3L258_HUMAN UniProtKB/TrEMBL
  I3L2S7_HUMAN UniProtKB/TrEMBL
  I3L2Y6_HUMAN UniProtKB/TrEMBL
  I3L351_HUMAN UniProtKB/TrEMBL
  I3L359_HUMAN UniProtKB/TrEMBL
  I3L416 ENTREZGENE
  I3L423_HUMAN UniProtKB/TrEMBL
  I3L426_HUMAN UniProtKB/TrEMBL
  I3L442_HUMAN UniProtKB/TrEMBL
  I3L482_HUMAN UniProtKB/TrEMBL
  I3NI06_HUMAN UniProtKB/TrEMBL
  P57737 ENTREZGENE
  Q17RK4 ENTREZGENE
UniProt Secondary B4DFD6 UniProtKB/Swiss-Prot
  B4DL18 UniProtKB/Swiss-Prot
  I3L416 UniProtKB/Swiss-Prot
  Q17RK4 UniProtKB/Swiss-Prot