WDR26 (WD repeat domain 26) - Rat Genome Database

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Gene: WDR26 (WD repeat domain 26) Homo sapiens
Analyze
Symbol: WDR26
Name: WD repeat domain 26
RGD ID: 1348746
HGNC Page HGNC:21208
Description: Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Located in cytosol; mitochondrion; and nucleoplasm. Part of ubiquitin ligase complex.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: CDW2; CUL4- and DDB1-associated WDR protein 2; FLJ21016; GID complex subunit 7 homolog; GID7; MIP2; myocardial ischemic preconditioning up-regulated protein 2; myocardial ischemic preconditioning upregulated protein 2; SKDEAS; WD repeat-containing protein 26
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381224,385,146 - 224,434,797 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1224,385,146 - 224,437,033 (-)EnsemblGRCh38hg38GRCh38
GRCh371224,572,848 - 224,622,499 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361222,639,815 - 222,688,335 (-)NCBINCBI36Build 36hg18NCBI36
Build 341220,879,927 - 220,928,447NCBI
Celera1197,763,775 - 197,812,936 (-)NCBICelera
Cytogenetic Map1q42.11-q42.12NCBI
HuRef1195,092,877 - 195,142,018 (-)NCBIHuRef
CHM1_11225,845,217 - 225,894,316 (-)NCBICHM1_1
T2T-CHM13v2.01223,573,956 - 223,623,646 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Object Symbol
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Original Reference(s)
WDR26HumanDevelopmental Disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental disorderClinVarPMID:25741868
WDR26Humangastrointestinal stromal tumor  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
WDR26Humangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28518168 and PMID:32461654
WDR26Humangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
WDR26Humangenetic disease  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868
WDR26Humanintellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25741868
WDR26Humanlong QT syndrome  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Long QT syndromeClinVarPMID:26132555
WDR26Humanparathyroid carcinoma  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532
WDR26HumanSkraban-Deardorff Syndrome  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Skraban-Deardorff syndromeClinVar 
WDR26HumanSkraban-Deardorff Syndrome  IAGP (Homo sapiens) and (Homo sapiens)8554872ClinVar Annotator: match by term: Skraban-Deardorff syndromeClinVarPMID:25741868 and PMID:28492532
WDR26HumanSkraban-Deardorff Syndrome  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Skraban-Deardorff syndromeClinVarPMID:28686853
WDR26HumanSkraban-Deardorff Syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Skraban-Deardorff syndromeClinVarPMID:25741868 and PMID:36269129
WDR26HumanSkraban-Deardorff Syndrome  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:25741868
WDR26HumanSkraban-Deardorff Syndrome  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Skraban-Deardorff syndromeClinVarPMID:25741869
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Original Reference(s)
WDR26HumanSkraban-Deardorff Syndrome  IAGP 7240710 OMIM 

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Original Reference(s)
WDR26Human(1->4)-beta-D-glucan multiple interactionsISOWdr26 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of WDR26 mRNACTDPMID:36331819
WDR26Human1,2-dimethylhydrazine decreases expressionISOWdr26 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of WDR26 mRNACTDPMID:22206623
WDR26Human14-Deoxy-11,12-didehydroandrographolide increases expressionEXP 648046414-deoxy-11 and 12-didehydroandrographolide results in increased expression of WDR26 mRNACTDPMID:22101062
WDR26Human2,3,7,8-tetrachlorodibenzodioxine affects expressionISOWdr26 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of WDR26 mRNACTDPMID:21570461
WDR26Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOWdr26 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of WDR26 mRNACTDPMID:33387578
WDR26Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOWdr26 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of WDR26 mRNACTDPMID:34747641
WDR26Human3-isobutyl-1-methyl-7H-xanthine multiple interactionsEXP 6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of WDR26 mRNACTDPMID:28628672
WDR26Human3-methylcholanthrene multiple interactionsEXP 6480464Methylcholanthrene promotes the reaction [AHR protein binds to WDR26 promoter]CTDPMID:20348232
WDR26Human4,4'-diaminodiphenylmethane decreases expressionISOWdr26 (Rattus norvegicus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of WDR26 mRNACTDPMID:30723492
WDR26Human4,4'-sulfonyldiphenol decreases expressionISOWdr26 (Mus musculus)6480464bisphenol S results in decreased expression of WDR26 mRNACTDPMID:39298647
WDR26Human5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole affects expressionISOWdr26 (Rattus norvegicus)6480464Omeprazole affects the expression of WDR26 mRNACTDPMID:19483382
WDR26Human6-propyl-2-thiouracil affects expressionISOWdr26 (Rattus norvegicus)6480464Propylthiouracil affects the expression of WDR26 mRNACTDPMID:19483382
WDR26Human6-propyl-2-thiouracil increases expressionISOWdr26 (Rattus norvegicus)6480464Propylthiouracil results in increased expression of WDR26 mRNACTDPMID:30047161
WDR26Humanallethrin multiple interactionsISOWdr26 (Rattus norvegicus)6480464[cypermethrin co-treated with decamethrin co-treated with fenvalerate co-treated with cyhalothrin co-treated with Allethrins] results in decreased expression of WDR26 proteinCTDPMID:34896426
WDR26Humanamiodarone affects expressionISOWdr26 (Rattus norvegicus)6480464Amiodarone affects the expression of WDR26 mRNACTDPMID:19483382
WDR26Humanamitrole increases expressionISOWdr26 (Rattus norvegicus)6480464Amitrole results in increased expression of WDR26 mRNACTDPMID:30047161
WDR26HumanAroclor 1254 decreases expressionISOWdr26 (Mus musculus)6480464Chlorodiphenyl (54% Chlorine) results in decreased expression of WDR26 mRNACTDPMID:23650126
WDR26Humanarsane affects expressionEXP 6480464Arsenic affects the expression of WDR26 mRNACTDPMID:18414638
WDR26Humanarsane affects methylationEXP 6480464Arsenic affects the methylation of WDR26 geneCTDPMID:25304211
WDR26Humanarsenic atom affects expressionEXP 6480464Arsenic affects the expression of WDR26 mRNACTDPMID:18414638

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Biological Process

  
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Original Reference(s)
WDR26Humanproteasome-mediated ubiquitin-dependent protein catabolic process involved_inIBAPANTHER:PTN000519953 and SGD:S000000544150520179 GO_CentralGO_REF:0000033

Cellular Component
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Original Reference(s)
WDR26Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
WDR26Humancytoplasm located_inIDA 150520179 PMID:15378603UniProtPMID:15378603
WDR26Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
WDR26Humancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-9861563 and Reactome:R-HSA-9861640
WDR26Humancytosol located_inIDA 150520179 HPAGO_REF:0000052
WDR26HumanGID complex part_ofIBAFB:FBgn0037094 more ...150520179 GO_CentralGO_REF:0000033
WDR26Humanmitochondrion located_inIEAUniProtKB-SubCell:SL-0173150520179 UniProtGO_REF:0000044
WDR26Humanmitochondrion located_inIDA 150520179 HPAGO_REF:0000052
WDR26Humanmitochondrion located_inIEAUniProtKB-KW:KW-0496150520179 UniProtGO_REF:0000043
WDR26Humannucleoplasm located_inIDA 150520179 HPAGO_REF:0000052
WDR26Humannucleus located_inIDA 150520179 PMID:29911972UniProtPMID:29911972
WDR26Humannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
WDR26Humannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
WDR26Humanubiquitin ligase complex part_ofIDA 150520179 PMID:29911972UniProtPMID:29911972
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Molecular Function

  
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Original Reference(s)
WDR26Humanprotein binding enablesIPIUniProtKB:O15169150520179 PMID:17510365 and PMID:27098453IntActPMID:17510365 and PMID:27098453
WDR26Humanprotein binding enablesIPIUniProtKB:P12755150520179 PMID:33961781 and PMID:34819669IntActPMID:33961781 and PMID:34819669

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Original Reference(s)
WDR26HumanAbducens palsy  IAGP 8699517 HPOORPHA:513456
WDR26HumanAbnormal Eustachian tube morphology  IAGP 8699517 HPOORPHA:513456
WDR26HumanAbnormal skeletal morphology  IAGP 8699517 HPOORPHA:513456
WDR26HumanAbnormality of the gingiva  IAGP 8699517 HPOORPHA:513456
WDR26HumanAbnormally large globe  IAGP 8699517 HPOMIM:617616 and PMID:28686853
WDR26HumanAbsent cupid's bow  IAGP 8699517 HPOORPHA:513456
WDR26HumanAbsent cupid's bow  IAGP 8699517 HPOMIM:617616 and PMID:28686853
WDR26HumanAbsent speech  IAGP 8699517 HPOORPHA:513456
WDR26HumanAbsent speech  IAGP 8699517 HPOMIM:617616
WDR26HumanAmblyopia  IAGP 8699517 HPOORPHA:513456
WDR26HumanAmblyopia  IAGP 8699517 HPOMIM:617616 and PMID:28686853
WDR26HumanAnteverted nares  IAGP 8699517 HPOORPHA:513456
WDR26HumanAnteverted nares  IAGP 8699517 HPOMIM:617616 and PMID:28686853
WDR26HumanAutistic behavior  IAGP 8699517 HPOORPHA:513456
WDR26HumanAutosomal dominant inheritance  IAGP 8699517 HPOMIM:617616 and PMID:28686853
WDR26HumanBilateral tonic-clonic seizure  IAGP 8699517 HPOORPHA:513456
WDR26HumanBrachycephaly  IAGP 8699517 HPOMIM:617616 and PMID:28686853
WDR26HumanBrain imaging abnormality  IAGP 8699517 HPOORPHA:513456
WDR26HumanBroad nasal tip  IAGP 8699517 HPOMIM:617616 and PMID:28686853
WDR26HumanBroad-based gait  IAGP 8699517 HPOORPHA:513456
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Original Reference(s)
WDR26HumanGastrointestinal stroma tumor  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
WDR26HumanIntellectual disability  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25741868
WDR26HumanParathyroid carcinoma  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532
WDR26HumanProlonged QT interval  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Long QT syndromeClinVarPMID:26132555
WDR26HumanProlonged QT interval  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Long QT syndromeClinVarPMID:26132555

#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
1 to 10 of 11 rows
PMID:8125298   PMID:8889548   PMID:11282995   PMID:11483580   PMID:12477932   PMID:14702039   PMID:15146197   PMID:15378603   PMID:15489334   PMID:15722257   PMID:16196087   PMID:17041588  
PMID:17081983   PMID:17289546   PMID:17510365   PMID:17620599   PMID:17643931   PMID:17785286   PMID:18029348   PMID:18587224   PMID:18775313   PMID:19446606   PMID:19542561   PMID:19615732  
PMID:20171191   PMID:21042317   PMID:21139048   PMID:21183687   PMID:21320693   PMID:21873635   PMID:21890473   PMID:21900206   PMID:21906983   PMID:22065575   PMID:22863883   PMID:22939629  
PMID:22990118   PMID:23000965   PMID:23402259   PMID:23625927   PMID:23667531   PMID:23956138   PMID:24366813   PMID:25544563   PMID:25670202   PMID:25918994   PMID:25921289   PMID:26186194  
PMID:26344197   PMID:26496610   PMID:26895380   PMID:26972000   PMID:27098453   PMID:27173435   PMID:27432908   PMID:27609421   PMID:27637333   PMID:27835684   PMID:28514442   PMID:28675297  
PMID:28685749   PMID:28686853   PMID:28794006   PMID:29053956   PMID:29229926   PMID:29331416   PMID:29491746   PMID:29509190   PMID:29656893   PMID:29911972   PMID:30196744   PMID:30462309  
PMID:30471866   PMID:30773093   PMID:30833792   PMID:31010829   PMID:31021590   PMID:31059266   PMID:31091453   PMID:31285494   PMID:31340145   PMID:31753913   PMID:31980649   PMID:32030560  
PMID:32068487   PMID:32129710   PMID:32235678   PMID:32416067   PMID:32552912   PMID:32698014   PMID:32707033   PMID:32812023   PMID:32958140   PMID:33060197   PMID:33239621   PMID:33506510  
PMID:33675273   PMID:33905682   PMID:33961781   PMID:34055682   PMID:34315543   PMID:34383978   PMID:34647674   PMID:34709266   PMID:34709727   PMID:34728620   PMID:34819669   PMID:35032548  
PMID:35256949   PMID:35271311   PMID:35446349   PMID:35509820   PMID:35563538   PMID:35627197   PMID:35776542   PMID:35831314   PMID:35833506   PMID:35914814   PMID:35944360   PMID:36114006  
1 to 10 of 11 rows



WDR26
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381224,385,146 - 224,434,797 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1224,385,146 - 224,437,033 (-)EnsemblGRCh38hg38GRCh38
GRCh371224,572,848 - 224,622,499 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361222,639,815 - 222,688,335 (-)NCBINCBI36Build 36hg18NCBI36
Build 341220,879,927 - 220,928,447NCBI
Celera1197,763,775 - 197,812,936 (-)NCBICelera
Cytogenetic Map1q42.11-q42.12NCBI
HuRef1195,092,877 - 195,142,018 (-)NCBIHuRef
CHM1_11225,845,217 - 225,894,316 (-)NCBICHM1_1
T2T-CHM13v2.01223,573,956 - 223,623,646 (-)NCBIT2T-CHM13v2.0
Wdr26
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391181,000,791 - 181,046,211 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1181,000,793 - 181,039,566 (-)EnsemblGRCm39 Ensembl
GRCm381181,173,226 - 181,220,921 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1181,173,228 - 181,212,001 (-)EnsemblGRCm38mm10GRCm38
MGSCv371183,103,357 - 183,142,109 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361183,014,368 - 183,048,045 (-)NCBIMGSCv36mm8
Celera1188,240,133 - 188,279,705 (-)NCBICelera
Cytogenetic Map1H4NCBI
cM Map184.53NCBI
Wdr26
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81395,462,017 - 95,503,826 (-)NCBIGRCr8
mRatBN7.21392,930,282 - 92,972,061 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1392,930,285 - 92,977,295 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1395,435,602 - 95,477,016 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01396,835,504 - 96,876,919 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01394,011,130 - 94,052,465 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01399,493,117 - 99,532,775 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1399,493,120 - 99,531,959 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013104,488,124 - 104,526,797 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41396,944,266 - 96,984,348 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1392,471,633 - 92,510,631 (-)NCBICelera
Cytogenetic Map13q26NCBI
Wdr26
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955520950,502 - 986,929 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955520950,505 - 983,963 (+)NCBIChiLan1.0ChiLan1.0
WDR26
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2125,093,026 - 25,142,497 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1125,043,748 - 25,093,175 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01199,853,860 - 199,903,474 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11204,861,784 - 204,911,148 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1204,861,784 - 204,914,538 (-)Ensemblpanpan1.1panPan2
WDR26
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1739,968,183 - 40,003,221 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl739,967,576 - 39,997,853 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha739,447,756 - 39,487,509 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0739,800,017 - 39,839,819 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl739,799,505 - 39,837,473 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1739,641,020 - 39,680,775 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0739,648,499 - 39,688,230 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0739,917,284 - 39,957,066 (+)NCBIUU_Cfam_GSD_1.0
Wdr26
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934453,273,000 - 53,317,076 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365261,434,653 - 1,474,314 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365261,429,972 - 1,474,296 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WDR26
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1012,713,769 - 12,756,549 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11012,713,528 - 12,756,713 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21015,136,567 - 15,179,565 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WDR26
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1255,339,056 - 5,393,173 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660555,522,246 - 5,571,153 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wdr26
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248356,005,173 - 6,041,915 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248356,000,566 - 6,041,917 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in WDR26
195 total Variants

1 to 10 of 1731 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
NM_005219.5(DIAPH1):c.2099T>A (p.Ile700Asn) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000546849]|not provided [RCV003480691] Chr5:141573751 [GRCh38]
Chr5:140953318 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.3003C>G (p.Ile1001Met) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000549611] Chr5:141528717 [GRCh38]
Chr5:140908284 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.1985G>A (p.Gly662Asp) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000554102]|Autosomal dominant nonsyndromic hearing loss 1 [RCV001157174]|not provided [RCV001562152]|not specified [RCV001195316] Chr5:141573865 [GRCh38]
Chr5:140953432 [GRCh37]
Chr5:5q31.3
benign|likely benign|uncertain significance
NM_005219.5(DIAPH1):c.118-9G>A single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000547762] Chr5:141588259 [GRCh38]
Chr5:140967826 [GRCh37]
Chr5:5q31.3
likely benign
NM_005219.5(DIAPH1):c.1269C>G (p.Asp423Glu) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000526185]|Progressive microcephaly-seizures-cortical blindness-developmental delay syndrome [RCV001420579] Chr5:141577486 [GRCh38]
Chr5:140957053 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.1659G>A (p.Lys553=) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000524722]|not provided [RCV001548203]|not specified [RCV001195574] Chr5:141574191 [GRCh38]
Chr5:140953758 [GRCh37]
Chr5:5q31.3
benign|likely benign
NM_005219.5(DIAPH1):c.3701C>T (p.Ala1234Val) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000548020] Chr5:141516969 [GRCh38]
Chr5:140896536 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.3574+6G>C single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV001043216]|not specified [RCV000602632] Chr5:141526032 [GRCh38]
Chr5:140905599 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_005219.5(DIAPH1):c.2877T>G (p.Ser959=) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000546409] Chr5:141528843 [GRCh38]
Chr5:140908410 [GRCh37]
Chr5:5q31.3
likely benign
NM_005219.5(DIAPH1):c.2158C>T (p.Leu720Phe) single nucleotide variant Autosomal dominant nonsyndromic hearing loss 1 [RCV000652763]|Inborn genetic diseases [RCV002525173]|not provided [RCV001722443]|not specified [RCV000519502] Chr5:141573692 [GRCh38]
Chr5:140953259 [GRCh37]
Chr5:5q31.3
likely benign|conflicting interpretations of pathogenicity|uncertain significance
1 to 10 of 1731 rows

Predicted Target Of
Summary Value
Count of predictions:6718
Count of miRNA genes:1235
Interacting mature miRNAs:1580
Transcripts:ENST00000295024, ENST00000366852, ENST00000414423, ENST00000443112, ENST00000445239, ENST00000477425, ENST00000479727, ENST00000479778, ENST00000480676, ENST00000486652, ENST00000489825
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 10 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597089111GWAS1185185_Hmonocyte percentage of leukocytes QTL GWAS1185185 (human)3e-13monocyte quantity (VT:0000223)blood monocyte count to total leukocyte count ratio (CMO:0000374)1224428742224428743Human
597245690GWAS1341764_HHbA1c measurement QTL GWAS1341764 (human)1e-10HbA1c measurementblood hemoglobin A1c level (CMO:0002786)1224410281224410282Human
597327390GWAS1423464_Hvital capacity QTL GWAS1423464 (human)5e-10vital capacity1224414541224414542Human
597279468GWAS1375542_Hhemoglobin A1 measurement QTL GWAS1375542 (human)7e-11hemoglobin A1 measurement1224410281224410282Human
597304015GWAS1400089_Hneutrophil count QTL GWAS1400089 (human)2e-19neutrophil quantity (VT:0000222)blood neutrophil count (CMO:0000030)1224414471224414472Human
597610777GWAS1667637_Hneutrophil count QTL GWAS1667637 (human)2e-22neutrophil quantity (VT:0000222)blood neutrophil count (CMO:0000030)1224391346224391347Human
597018546GWAS1114620_Hadolescent idiopathic scoliosis QTL GWAS1114620 (human)0.0000004adolescent idiopathic scoliosis1224412564224412565Human
596979404GWAS1098923_Hbody height QTL GWAS1098923 (human)9e-26body height1224407291224407292Human
597056314GWAS1152388_Hbasophil percentage of leukocytes QTL GWAS1152388 (human)4e-10basophil quantity (VT:0002607)blood basophil count to total leukocyte count ratio (CMO:0000368)1224426923224426924Human
597061641GWAS1157715_Hvital capacity QTL GWAS1157715 (human)2e-08vital capacity1224423205224423206Human

1 to 10 of 10 rows
SHGC-76417  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,605,745 - 224,605,865UniSTSGRCh37
Build 361222,672,368 - 222,672,488RGDNCBI36
Celera1197,796,676 - 197,796,796RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,125,755 - 195,125,875UniSTS
TNG Radiation Hybrid Map1111817.0UniSTS
GeneMap99-GB4 RH Map1715.41UniSTS
RH99062  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,575,739 - 224,575,891UniSTSGRCh37
Build 361222,642,362 - 222,642,514RGDNCBI36
Celera1197,766,669 - 197,766,821RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,095,771 - 195,095,924UniSTS
GeneMap99-GB4 RH Map1715.41UniSTS
SHGC-111798  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,584,563 - 224,584,787UniSTSGRCh37
Build 361222,651,186 - 222,651,410RGDNCBI36
Celera1197,775,493 - 197,775,709RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,104,593 - 195,104,807UniSTS
TNG Radiation Hybrid Map1111801.0UniSTS
SHGC-76410  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,572,966 - 224,573,108UniSTSGRCh37
Build 361222,639,589 - 222,639,731RGDNCBI36
Celera1197,763,896 - 197,764,038RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,092,998 - 195,093,140UniSTS
TNG Radiation Hybrid Map1111776.0UniSTS
GeneMap99-GB4 RH Map1715.41UniSTS
AL009443  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,574,414 - 224,574,547UniSTSGRCh37
Build 361222,641,037 - 222,641,170RGDNCBI36
Celera1197,765,344 - 197,765,477RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,094,446 - 195,094,579UniSTS
SHGC-32811  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,573,176 - 224,573,300UniSTSGRCh37
Build 361222,639,799 - 222,639,923RGDNCBI36
Celera1197,764,106 - 197,764,230RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,093,208 - 195,093,332UniSTS
TNG Radiation Hybrid Map1111170.0UniSTS
GeneMap99-GB4 RH Map1713.95UniSTS
GeneMap99-GB4 RH Map1715.07UniSTS
Whitehead-RH Map1887.1UniSTS
NCBI RH Map12071.8UniSTS
GeneMap99-G3 RH Map18800.0UniSTS
SHGC-76418  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,599,539 - 224,599,726UniSTSGRCh37
Build 361222,666,162 - 222,666,349RGDNCBI36
Celera1197,790,472 - 197,790,659RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,119,550 - 195,119,737UniSTS
TNG Radiation Hybrid Map1111822.0UniSTS
GeneMap99-GB4 RH Map1715.41UniSTS
SHGC-56807  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,607,006 - 224,607,279UniSTSGRCh37
Build 361222,673,629 - 222,673,902RGDNCBI36
Celera1197,797,937 - 197,798,210RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,127,016 - 195,127,289UniSTS
TNG Radiation Hybrid Map1111817.0UniSTS
SGC32093  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371224,572,861 - 224,572,972UniSTSGRCh37
Build 361222,639,484 - 222,639,595RGDNCBI36
Celera1197,763,791 - 197,763,902RGD
Cytogenetic Map1q42.13UniSTS
HuRef1195,092,893 - 195,093,004UniSTS
GeneMap99-GB4 RH Map1713.95UniSTS
GeneMap99-GB4 RH Map1715.38UniSTS
Whitehead-RH Map1897.6UniSTS
G35510  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1q21UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map2p25-p24UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6pter-q22.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map11q14.2-q21UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map9p21.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map5q31-q32UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map18p11.22-p11.21UniSTS
Cytogenetic Map5q34-q35UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic MapXp22.32UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map20q13.33UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2432 2788 2245 4946 1723 2345 5 622 1949 464 2268 7287 6458 52 3712 850 1736 1612 172


1 to 30 of 30 rows
RefSeq Transcripts NG_047198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001115113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001379403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_025160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB209887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB586698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC099790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF130049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK023023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK024669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK225061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK299230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK307909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY221751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY304473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC041978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC063817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF509638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG744504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU673957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF786114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN283908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT002105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF011612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 30 rows

Ensembl Acc Id: ENST00000414423   ⟹   ENSP00000408108
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,385,146 - 224,434,797 (-)Ensembl
Ensembl Acc Id: ENST00000443112
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,389,148 - 224,434,013 (-)Ensembl
Ensembl Acc Id: ENST00000445239   ⟹   ENSP00000403597
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,419,562 - 224,437,033 (-)Ensembl
Ensembl Acc Id: ENST00000477425
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,419,549 - 224,433,838 (-)Ensembl
Ensembl Acc Id: ENST00000479727
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,397,727 - 224,401,019 (-)Ensembl
Ensembl Acc Id: ENST00000479778
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,429,297 - 224,433,850 (-)Ensembl
Ensembl Acc Id: ENST00000480676   ⟹   ENSP00000424784
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,385,666 - 224,411,484 (-)Ensembl
Ensembl Acc Id: ENST00000486652   ⟹   ENSP00000422758
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,389,136 - 224,434,081 (-)Ensembl
Ensembl Acc Id: ENST00000489825
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,419,445 - 224,433,856 (-)Ensembl
Ensembl Acc Id: ENST00000651911   ⟹   ENSP00000498603
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,385,161 - 224,433,995 (-)Ensembl
Ensembl Acc Id: ENST00000678307   ⟹   ENSP00000503416
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,433,096 - 224,434,797 (-)Ensembl
Ensembl Acc Id: ENST00000678555   ⟹   ENSP00000504302
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,389,184 - 224,434,797 (-)Ensembl
Ensembl Acc Id: ENST00000678879   ⟹   ENSP00000503936
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,385,184 - 224,433,888 (-)Ensembl
Ensembl Acc Id: ENST00000678917   ⟹   ENSP00000504428
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,385,146 - 224,434,797 (-)Ensembl
Ensembl Acc Id: ENST00000704632   ⟹   ENSP00000515968
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,389,254 - 224,433,871 (-)Ensembl
Ensembl Acc Id: ENST00000704640   ⟹   ENSP00000515971
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1224,389,150 - 224,433,737 (-)Ensembl
RefSeq Acc Id: NM_001115113   ⟹   NP_001108585
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381224,385,146 - 224,434,797 (-)NCBI
GRCh371224,572,845 - 224,622,001 (-)RGD
Celera1197,763,775 - 197,812,936 (-)RGD
HuRef1195,092,877 - 195,142,018 (-)ENTREZGENE
CHM1_11225,845,217 - 225,894,316 (-)NCBI
T2T-CHM13v2.01223,573,956 - 223,623,646 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001379403   ⟹   NP_001366332
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381224,385,146 - 224,434,797 (-)NCBI
T2T-CHM13v2.01223,573,956 - 223,623,646 (-)NCBI
Sequence:
RefSeq Acc Id: NM_025160   ⟹   NP_079436
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381224,385,146 - 224,434,797 (-)NCBI
GRCh371224,572,845 - 224,622,001 (-)RGD
Build 361222,639,815 - 222,688,335 (-)NCBI Archive
Celera1197,763,775 - 197,812,936 (-)RGD
HuRef1195,092,877 - 195,142,018 (-)ENTREZGENE
CHM1_11225,845,217 - 225,894,316 (-)NCBI
T2T-CHM13v2.01223,573,956 - 223,623,646 (-)NCBI
Sequence:
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RefSeq Acc Id: NP_079436   ⟸   NM_025160
- Peptide Label: isoform a
- UniProtKB: Q86UY4 (UniProtKB/Swiss-Prot),   Q5GLZ9 (UniProtKB/Swiss-Prot),   Q59EC4 (UniProtKB/Swiss-Prot),   Q4G100 (UniProtKB/Swiss-Prot),   A0MNN3 (UniProtKB/Swiss-Prot),   Q9H3C2 (UniProtKB/Swiss-Prot),   Q9H7D7 (UniProtKB/Swiss-Prot),   A0A7P0SXD0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001108585   ⟸   NM_001115113
- Peptide Label: isoform b
- UniProtKB: A0A7P0SXD0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001366332   ⟸   NM_001379403
- Peptide Label: isoform c
- UniProtKB: A0A499FIZ0 (UniProtKB/TrEMBL),   A0A7I2YQQ9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSP00000408108   ⟸   ENST00000414423
Ensembl Acc Id: ENSP00000498603   ⟸   ENST00000651911
CTLH   LisH   TPL/SMU1 LisH-like dimerisation

Name Modeler Protein Id AA Range Protein Structure
AF-Q9H7D7-F1-model_v2 AlphaFold Q9H7D7 1-661 view protein structure

RGD ID:6809760
Promoter ID:HG_ACW:6004
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:WDR26.LAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 361222,686,716 - 222,687,216 (-)MPROMDB
RGD ID:6786098
Promoter ID:HG_KWN:7535
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001115113,   NM_025160,   OTTHUMT00000091763,   OTTHUMT00000091764,   OTTHUMT00000091765,   OTTHUMT00000091768,   OTTHUMT00000092004,   OTTHUMT00000092005,   UC001HOR.1,   UC009XEH.1,   UC009XEI.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361222,687,151 - 222,689,237 (-)MPROMDB
RGD ID:6859094
Promoter ID:EPDNEW_H2711
Type:initiation region
Name:WDR26_1
Description:WD repeat domain 26
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2713  EPDNEW_H2712  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381224,434,032 - 224,434,092EPDNEW
RGD ID:6859132
Promoter ID:EPDNEW_H2712
Type:initiation region
Name:WDR26_2
Description:WD repeat domain 26
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2711  EPDNEW_H2713  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381224,434,292 - 224,434,352EPDNEW
RGD ID:6859096
Promoter ID:EPDNEW_H2713
Type:initiation region
Name:WDR26_3
Description:WD repeat domain 26
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H2711  EPDNEW_H2712  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381224,437,033 - 224,437,093EPDNEW


1 to 40 of 56 rows
Database
Acc Id
Source(s)
COSMIC WDR26 COSMIC
Ensembl Genes ENSG00000162923 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000414423 ENTREZGENE
  ENST00000651911 ENTREZGENE
  ENST00000678917 ENTREZGENE
  ENST00000678917.1 UniProtKB/Swiss-Prot
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot
GTEx ENSG00000162923 GTEx
HGNC ID HGNC:21208 ENTREZGENE
Human Proteome Map WDR26 Human Proteome Map
InterPro CTLH_C UniProtKB/Swiss-Prot
  LisH UniProtKB/Swiss-Prot
  TPL_SMU1_LisH-like UniProtKB/Swiss-Prot
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot
  WD40_repeat UniProtKB/Swiss-Prot
  WD40_repeat_dom_sf UniProtKB/Swiss-Prot
  WD_repeat-ST_regulator UniProtKB/Swiss-Prot
KEGG Report hsa:80232 UniProtKB/Swiss-Prot
NCBI Gene 80232 ENTREZGENE
OMIM 617424 OMIM
PANTHER WD REPEAT PROTEIN 26-RELATED UniProtKB/Swiss-Prot
  WD REPEAT-CONTAINING PROTEIN 26 UniProtKB/Swiss-Prot
Pfam LisH_TPL UniProtKB/Swiss-Prot
  WD40 UniProtKB/Swiss-Prot
PharmGKB PA134907873 PharmGKB
PROSITE CTLH UniProtKB/Swiss-Prot
  LISH UniProtKB/Swiss-Prot
  WD_REPEATS_2 UniProtKB/Swiss-Prot
  WD_REPEATS_REGION UniProtKB/Swiss-Prot
SMART CTLH UniProtKB/Swiss-Prot
  WD40 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50978 UniProtKB/Swiss-Prot
UniProt A0A499FIZ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A7I2V3I7_HUMAN UniProtKB/TrEMBL
  A0A7I2YQL3_HUMAN UniProtKB/TrEMBL
  A0A7I2YQQ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A7P0SXD0 ENTREZGENE, UniProtKB/TrEMBL
  A0A994J579_HUMAN UniProtKB/TrEMBL
  A0A994J7J9_HUMAN UniProtKB/TrEMBL
  A0MNN3 ENTREZGENE
1 to 40 of 56 rows