ASNSP1 (ASNS pseudogene 1) - Rat Genome Database

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Gene: ASNSP1 (ASNS pseudogene 1) Homo sapiens
Analyze
Symbol: ASNSP1
Name: ASNS pseudogene 1
RGD ID: 1346746
HGNC Page HGNC:754
Description: INTERACTS WITH silicon dioxide; sodium arsenite
Type: pseudo (Ensembl: transcribed_unprocessed_pseudogene)
RefSeq Status: VALIDATED
Previously known as: ASNSL1; asparagine synthetase pseudogene 1
Related Functional Gene: ASNS  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38846,579,213 - 46,617,643 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl846,579,213 - 46,614,523 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p14 Ensembl846,579,211 - 46,638,886 (-)EnsemblGRCh38hg38GRCh38
GRCh37847,490,835 - 47,529,265 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36847,610,000 - 47,645,724 (-)NCBINCBI36Build 36hg18NCBI36
Celera843,489,381 - 43,510,469 (-)NCBICelera
Cytogenetic Map8q11.1NCBI
HuRef842,958,469 - 42,979,971 (-)NCBIHuRef
CHM1_1847,541,916 - 47,580,466 (-)NCBICHM1_1
T2T-CHM13v2.0846,954,977 - 46,993,450 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ASNSP1Humansilicon dioxide decreases expressionEXP 6480464Silicon Dioxide results in decreased expression of ASNSP1 mRNACTDPMID:34973136
ASNSP1Humansodium arsenite increases expressionEXP 6480464sodium arsenite results in increased expression of ASNSP1 mRNACTDPMID:29301061



.

Predicted Target Of
Summary Value
Count of predictions:84
Count of miRNA genes:78
Interacting mature miRNAs:79
Transcripts:ENST00000518311
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597439173GWAS1535247_Hcoronary artery calcification QTL GWAS1535247 (human)0.000007coronary artery calcification84660528846605289Human
2289597BW470_HBody weight QTL 470 (human)1.3Body weightBMI83977088765770887Human

REN104321  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377114,532,766 - 114,533,005UniSTSGRCh37
Build 367114,320,002 - 114,320,241RGDNCBI36
Celera843,509,008 - 43,509,260UniSTS
Celera7109,339,304 - 109,339,543RGD
HuRef842,992,373 - 42,992,625UniSTS
HuRef7108,897,140 - 108,897,379UniSTS
CRA_TCAGchr7v27113,928,030 - 113,928,269UniSTS
D8S1585  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37847,505,218 - 47,505,367UniSTSGRCh37
Build 36847,624,383 - 47,624,532RGDNCBI36
Celera843,489,520 - 43,489,669RGD
Cytogenetic Map8q11.1UniSTS
HuRef842,972,888 - 42,973,037UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
461 405 594 267 1301 409 526 1 106 214 91 590 1190 1124 34 996 144 802 361 19



Ensembl Acc Id: ENST00000518311
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,614,523 (-)Ensembl
Ensembl Acc Id: ENST00000641079
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,319 (-)Ensembl
Ensembl Acc Id: ENST00000641735
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,301 - 46,617,643 (-)Ensembl
Ensembl Acc Id: ENST00000641977
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,638,886 (-)Ensembl
Ensembl Acc Id: ENST00000787158
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,211 - 46,617,708 (-)Ensembl
Ensembl Acc Id: ENST00000787159
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,662 (-)Ensembl
Ensembl Acc Id: ENST00000787160
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,658 (-)Ensembl
Ensembl Acc Id: ENST00000787161
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,658 (-)Ensembl
Ensembl Acc Id: ENST00000787162
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,639 (-)Ensembl
Ensembl Acc Id: ENST00000787163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,639 (-)Ensembl
Ensembl Acc Id: ENST00000787164
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,635 (-)Ensembl
Ensembl Acc Id: ENST00000787166
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,218 - 46,617,632 (-)Ensembl
Ensembl Acc Id: ENST00000787167
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,605 (-)Ensembl
Ensembl Acc Id: ENST00000787168
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,605 (-)Ensembl
Ensembl Acc Id: ENST00000787169
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,605 (-)Ensembl
Ensembl Acc Id: ENST00000787170
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,605 (-)Ensembl
Ensembl Acc Id: ENST00000787172
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,605 (-)Ensembl
Ensembl Acc Id: ENST00000787174
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,603 (-)Ensembl
Ensembl Acc Id: ENST00000787175
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,351 (-)Ensembl
Ensembl Acc Id: ENST00000787176
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,347 (-)Ensembl
Ensembl Acc Id: ENST00000787179
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,347 (-)Ensembl
Ensembl Acc Id: ENST00000787180
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,346 (-)Ensembl
Ensembl Acc Id: ENST00000787181
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,332 (-)Ensembl
Ensembl Acc Id: ENST00000787182
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,327 (-)Ensembl
Ensembl Acc Id: ENST00000787183
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,211 - 46,617,324 (-)Ensembl
Ensembl Acc Id: ENST00000787184
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,319 (-)Ensembl
Ensembl Acc Id: ENST00000787185
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,319 (-)Ensembl
Ensembl Acc Id: ENST00000787186
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,317 (-)Ensembl
Ensembl Acc Id: ENST00000787187
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,579,213 - 46,617,312 (-)Ensembl
Ensembl Acc Id: ENST00000787188
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,594,614 - 46,617,625 (-)Ensembl
Ensembl Acc Id: ENST00000787189
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,603,637 - 46,617,326 (-)Ensembl
Ensembl Acc Id: ENST00000787190
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,614,209 - 46,617,656 (-)Ensembl
Ensembl Acc Id: ENST00000787191
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,614,207 - 46,617,332 (-)Ensembl
Ensembl Acc Id: ENST00000787192
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl846,616,784 - 46,617,695 (-)Ensembl
RefSeq Acc Id: NR_146077
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38846,579,213 - 46,617,643 (-)NCBI
T2T-CHM13v2.0846,954,977 - 46,993,450 (-)NCBI
Sequence:


1 to 10 of 10 rows
Database
Acc Id
Source(s)
COSMIC ASNSP1 COSMIC
Ensembl Genes ENSG00000248498 Ensembl
  ENSG00000290398 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000641735 ENTREZGENE
GTEx ENSG00000248498 GTEx
  ENSG00000290398 GTEx
HGNC ID HGNC:754 ENTREZGENE
Human Proteome Map ASNSP1 Human Proteome Map
NCBI Gene ASNSP1 ENTREZGENE
PharmGKB PA25053 PharmGKB
1 to 10 of 10 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-06-14 ASNSP1  ASNS pseudogene 1  ASNSP1  asparagine synthetase pseudogene 1  Symbol and/or name change 19259463 PROVISIONAL
2011-07-27 ASNSP1  asparagine synthetase pseudogene 1  ASNSL1  asparagine synthetase-like 1  Symbol and/or name change 5135510 APPROVED