STRIP2 (striatin interacting protein 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: STRIP2 (striatin interacting protein 2) Homo sapiens
Analyze
Symbol: STRIP2
Name: striatin interacting protein 2
RGD ID: 1344527
HGNC Page HGNC:22209
Description: Involved in cell migration; cytoskeleton organization; and regulation of cell shape. Located in cytosol. Part of FAR/SIN/STRIPAK complex.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FAM40B; family with sequence similarity 40, member B; FAR11 factor arrest 11 homolog B; FAR11B; homolog of yeast FAR11 protein 2; hypothetical protein LOC57464; striatin-interacting protein 2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387129,434,432 - 129,488,399 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7129,434,432 - 129,488,399 (+)EnsemblGRCh38hg38GRCh38
GRCh377129,074,273 - 129,128,240 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367128,861,536 - 128,915,473 (+)NCBINCBI36Build 36hg18NCBI36
Celera7123,871,017 - 123,924,972 (+)NCBICelera
Cytogenetic Map7q32.1NCBI
HuRef7123,435,594 - 123,489,594 (+)NCBIHuRef
CHM1_17129,007,840 - 129,061,781 (+)NCBICHM1_1
T2T-CHM13v2.07130,747,403 - 130,801,465 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27128,458,245 - 128,512,203 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
STRIP2Humanpleomorphic xanthoastrocytoma  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Pleomorphic xanthoastrocytomaClinVarPMID:28299358

1 to 20 of 77 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
STRIP2Human(-)-demecolcine decreases expressionEXP 6480464Demecolcine results in decreased expression of STRIP2 mRNACTDPMID:23649840
STRIP2Human(S)-nicotine decreases expressionISOStrip2 (Mus musculus)6480464Nicotine results in decreased expression of STRIP2 mRNACTDPMID:21955143
STRIP2Human1,2-dimethylhydrazine decreases expressionISOStrip2 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of STRIP2 mRNACTDPMID:22206623
STRIP2Human17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of STRIP2 mRNACTDPMID:22574217
STRIP2Human17beta-estradiol multiple interactionsISOStrip2 (Rattus norvegicus)6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of STRIP2 mRNACTDPMID:32741896
STRIP2Human17beta-estradiol 3-benzoate multiple interactionsISOStrip2 (Rattus norvegicus)6480464[estradiol 3-benzoate co-treated with [Testosterone co-treated with Estradiol]] results in increased expression of STRIP2 mRNACTDPMID:32741896
STRIP2Human2,2',4,4',5,5'-hexachlorobiphenyl multiple interactionsISOStrip2 (Mus musculus)6480464[2 more ...CTDPMID:25510870
STRIP2Human2,2',5,5'-tetrachlorobiphenyl multiple interactionsISOStrip2 (Mus musculus)6480464[2 more ...CTDPMID:25510870
STRIP2Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of STRIP2 mRNACTDPMID:20106945
STRIP2Human2,4-dibromophenyl 2,4,5-tribromophenyl ether affects expressionISOStrip2 (Mus musculus)64804642 more ...CTDPMID:38648751
STRIP2Human2-hydroxypropanoic acid decreases expressionEXP 6480464Lactic Acid results in decreased expression of STRIP2 mRNACTDPMID:30851411
STRIP2Human3,4-methylenedioxymethamphetamine increases expressionISOStrip2 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of STRIP2 mRNACTDPMID:20188158
STRIP2Humanaflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of STRIP2 mRNACTDPMID:22100608
STRIP2Humanaldehydo-D-glucose multiple interactionsISOStrip2 (Mus musculus)6480464fucoxanthin inhibits the reaction [Glucose results in increased expression of STRIP2 mRNA]CTDPMID:33448797
STRIP2Humanaldehydo-D-glucose increases expressionISOStrip2 (Mus musculus)6480464Glucose results in increased expression of STRIP2 mRNACTDPMID:33448797
STRIP2Humanall-trans-retinoic acid decreases expressionEXP 6480464Tretinoin results in decreased expression of STRIP2 mRNACTDPMID:21934132 and PMID:33167477
STRIP2Humanall-trans-retinoic acid decreases expressionISOStrip2 (Mus musculus)6480464Tretinoin results in decreased expression of STRIP2 mRNACTDPMID:36189433
STRIP2Humanall-trans-retinoic acid multiple interactionsISOStrip2 (Mus musculus)6480464[mono-(2-ethylhexyl)phthalate co-treated with Tretinoin] results in decreased expression of STRIP2 mRNACTDPMID:36189433
STRIP2Humanamphetamine increases expressionISOStrip2 (Rattus norvegicus)6480464Amphetamine results in increased expression of STRIP2 mRNACTDPMID:30779732
STRIP2Humanarsane affects methylationEXP 6480464Arsenic affects the methylation of STRIP2 geneCTDPMID:25304211

1 to 20 of 77 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
STRIP2Humancell migration involved_inIMP 150520179 PMID:21834987UniProtPMID:21834987
STRIP2Humancytoskeleton organization involved_inIMP 150520179 PMID:21834987UniProtPMID:21834987
STRIP2Humancytoskeleton organization involved_inIBAFB:FBgn0035437 more ...150520179 GO_CentralGO_REF:0000033
STRIP2Humanregulation of cell shape involved_inIMP 150520179 PMID:21834987UniProtPMID:21834987

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
STRIP2Humancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
STRIP2Humancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
STRIP2Humancytoplasm located_inIDA 150520179 PMID:21834987UniProtPMID:21834987
STRIP2Humancytosol located_inIDA 150520179 HPAGO_REF:0000052
STRIP2Humancytosol is_active_inIBAPANTHER:PTN000326293 more ...150520179 GO_CentralGO_REF:0000033
STRIP2HumanFAR/SIN/STRIPAK complex part_ofIDA 150520179 PMID:18782753UniProtPMID:18782753

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
STRIP2HumanPleomorphic xanthoastrocytoma  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Pleomorphic xanthoastrocytomaClinVarPMID:28299358

#
Reference Title
Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10574461   PMID:11076863   PMID:12477932   PMID:12588993   PMID:15489334   PMID:15489336   PMID:16344560   PMID:16381901   PMID:18782753   PMID:19615732   PMID:21832049   PMID:21834987  
PMID:21873635   PMID:22298706   PMID:22782902   PMID:23455922   PMID:24366813   PMID:25531779   PMID:25798074   PMID:26186194   PMID:26496610   PMID:27122098   PMID:28330616   PMID:28514442  
PMID:30509168   PMID:31901223   PMID:32640226   PMID:32707033   PMID:33853758   PMID:33961781   PMID:34079125   PMID:34672954   PMID:35271311   PMID:36639675   PMID:36724073   PMID:36897256  
PMID:37219487   PMID:39191354  



STRIP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387129,434,432 - 129,488,399 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7129,434,432 - 129,488,399 (+)EnsemblGRCh38hg38GRCh38
GRCh377129,074,273 - 129,128,240 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367128,861,536 - 128,915,473 (+)NCBINCBI36Build 36hg18NCBI36
Celera7123,871,017 - 123,924,972 (+)NCBICelera
Cytogenetic Map7q32.1NCBI
HuRef7123,435,594 - 123,489,594 (+)NCBIHuRef
CHM1_17129,007,840 - 129,061,781 (+)NCBICHM1_1
T2T-CHM13v2.07130,747,403 - 130,801,465 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27128,458,245 - 128,512,203 (+)NCBI
Strip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39629,916,975 - 29,959,680 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl629,917,011 - 29,959,680 (+)EnsemblGRCm39 Ensembl
GRCm38629,916,976 - 29,959,681 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl629,917,012 - 29,959,681 (+)EnsemblGRCm38mm10GRCm38
MGSCv37629,867,013 - 29,909,681 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36629,867,023 - 29,909,691 (+)NCBIMGSCv36mm8
Celera629,927,990 - 29,969,287 (+)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.36NCBI
Strip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8459,503,478 - 59,545,745 (+)NCBIGRCr8
mRatBN7.2458,536,034 - 58,578,279 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl458,536,055 - 58,578,291 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0457,204,850 - 57,248,912 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl457,204,944 - 57,246,675 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0456,972,022 - 57,011,392 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4456,810,184 - 56,860,306 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera453,637,351 - 53,679,028 (+)NCBICelera
Cytogenetic Map4q22NCBI
Strip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547910,217,782 - 10,267,897 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495547910,218,648 - 10,267,897 (+)NCBIChiLan1.0ChiLan1.0
STRIP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26166,247,164 - 166,305,342 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1718,257,409 - 18,315,587 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07121,391,919 - 121,450,204 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17133,914,060 - 133,971,515 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7133,917,544 - 133,971,515 (+)Ensemblpanpan1.1panPan2
STRIP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1147,291,995 - 7,341,528 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl147,294,330 - 7,341,567 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha146,978,676 - 7,027,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0147,056,790 - 7,105,827 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl146,970,763 - 7,105,818 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1147,261,989 - 7,311,030 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0147,004,097 - 7,053,099 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0147,148,709 - 7,197,749 (-)NCBIUU_Cfam_GSD_1.0
Strip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511825,514,531 - 25,560,488 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365795,646,658 - 5,693,136 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365795,648,944 - 5,693,076 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STRIP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1819,209,051 - 19,255,676 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11819,209,047 - 19,255,671 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21820,279,736 - 20,326,447 (-)NCBISscrofa10.2Sscrofa10.2susScr3
STRIP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12198,037,893 - 98,093,145 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2198,037,961 - 98,094,883 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660425,311,022 - 5,366,356 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Strip2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247836,740,818 - 6,788,236 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247836,740,253 - 6,787,966 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in STRIP2
47 total Variants

1 to 10 of 80 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 7q32.1-36.3(chr7:129310166-159282390)x3 copy number gain See cases [RCV000050876] Chr7:129310166..159282390 [GRCh38]
Chr7:128950007..159075079 [GRCh37]
Chr7:128737243..158767840 [NCBI36]
Chr7:7q32.1-36.3
pathogenic
GRCh38/hg38 7q32.1-33(chr7:128747478-134018250)x3 copy number gain See cases [RCV000051072] Chr7:128747478..134018250 [GRCh38]
Chr7:128387532..133703003 [GRCh37]
Chr7:128174768..133353543 [NCBI36]
Chr7:7q32.1-33
pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1 copy number loss See cases [RCV000052250] Chr7:53985..159282531 [GRCh38]
Chr7:53985..159075220 [GRCh37]
Chr7:149068..158767981 [NCBI36]
Chr7:7p22.3-q36.3
pathogenic
GRCh38/hg38 7q31.33-32.3(chr7:126859732-132750936)x1 copy number loss See cases [RCV000054171] Chr7:126859732..132750936 [GRCh38]
Chr7:126499786..132435696 [GRCh37]
Chr7:126287022..132086236 [NCBI36]
Chr7:7q31.33-32.3
pathogenic
NM_020704.2(STRIP2):c.2306C>T (p.Ala769Val) single nucleotide variant Malignant melanoma [RCV000067633] Chr7:129485630 [GRCh38]
Chr7:129125471 [GRCh37]
Chr7:128912707 [NCBI36]
Chr7:7q32.1
not provided
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1 copy number loss See cases [RCV000135401] Chr7:54185..159282390 [GRCh38]
Chr7:54185..159075079 [GRCh37]
Chr7:149268..158767840 [NCBI36]
Chr7:7p22.3-q36.3
pathogenic
GRCh38/hg38 7q21.3-36.3(chr7:97419852-158923762)x3 copy number gain See cases [RCV000136717] Chr7:97419852..158923762 [GRCh38]
Chr7:97049164..158716453 [GRCh37]
Chr7:96887100..158409214 [NCBI36]
Chr7:7q21.3-36.3
pathogenic
GRCh38/hg38 7q31.2-33(chr7:117326805-134790689)x1 copy number loss See cases [RCV000138226] Chr7:117326805..134790689 [GRCh38]
Chr7:116966859..134475440 [GRCh37]
Chr7:116754095..134125980 [NCBI36]
Chr7:7q31.2-33
pathogenic
GRCh38/hg38 7q31.32-36.3(chr7:121863759-159335865)x3 copy number gain See cases [RCV000138847] Chr7:121863759..159335865 [GRCh38]
Chr7:121503813..159128555 [GRCh37]
Chr7:121291049..158821316 [NCBI36]
Chr7:7q31.32-36.3
pathogenic
GRCh38/hg38 7q31.2-36.3(chr7:115459015-159325817)x3 copy number gain See cases [RCV000141413] Chr7:115459015..159325817 [GRCh38]
Chr7:115099069..159118507 [GRCh37]
Chr7:114886305..158811268 [NCBI36]
Chr7:7q31.2-36.3
pathogenic
1 to 10 of 80 rows

Predicted Target Of
Summary Value
Count of predictions:1277
Count of miRNA genes:767
Interacting mature miRNAs:875
Transcripts:ENST00000249344, ENST00000435494, ENST00000465033
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597181788GWAS1277862_Hhemoglobin measurement QTL GWAS1277862 (human)0.0000002hemoglobin measurementhemoglobin measurement (CMO:0000508)7129484907129484908Human

STS-AA011441  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377129,128,072 - 129,128,206UniSTSGRCh37
Build 367128,915,308 - 128,915,442RGDNCBI36
Celera7123,924,804 - 123,924,938RGD
Cytogenetic Map7q32.1UniSTS
HuRef7123,489,426 - 123,489,560UniSTS
CRA_TCAGchr7v27128,512,035 - 128,512,169UniSTS
GeneMap99-GB4 RH Map7588.28UniSTS
NCBI RH Map71192.6UniSTS
SHGC-32481  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377129,114,783 - 129,114,912UniSTSGRCh37
Build 367128,902,019 - 128,902,148RGDNCBI36
Celera7123,911,519 - 123,911,648RGD
Cytogenetic Map7q32.1UniSTS
HuRef7123,476,091 - 123,476,220UniSTS
CRA_TCAGchr7v27128,498,747 - 128,498,876UniSTS
Whitehead-RH Map7554.8UniSTS
RH93307  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377129,127,977 - 129,128,099UniSTSGRCh37
Build 367128,915,213 - 128,915,335RGDNCBI36
Celera7123,924,709 - 123,924,831RGD
Cytogenetic Map7q32.1UniSTS
HuRef7123,489,331 - 123,489,453UniSTS
CRA_TCAGchr7v27128,511,940 - 128,512,062UniSTS
GeneMap99-GB4 RH Map7589.99UniSTS
SHGC-84574  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377129,073,443 - 129,073,752UniSTSGRCh37
Build 367128,860,679 - 128,860,988RGDNCBI36
Celera7123,870,186 - 123,870,495RGD
Cytogenetic Map7q32.1UniSTS
HuRef7123,434,763 - 123,435,072UniSTS
CRA_TCAGchr7v27128,457,414 - 128,457,723UniSTS
TNG Radiation Hybrid Map758245.0UniSTS
GDB:4585005  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377129,110,616 - 129,110,757UniSTSGRCh37
Build 367128,897,852 - 128,897,993RGDNCBI36
Celera7123,907,352 - 123,907,493RGD
Cytogenetic Map7q32.1UniSTS
HuRef7123,471,928 - 123,472,069UniSTS
CRA_TCAGchr7v27128,494,580 - 128,494,721UniSTS
GDB:4585689  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh377129,090,190 - 129,090,272UniSTSGRCh37
Build 367128,877,426 - 128,877,508RGDNCBI36
Celera7123,886,934 - 123,887,016RGD
Cytogenetic Map7q32.1UniSTS
HuRef7123,451,511 - 123,451,593UniSTS
CRA_TCAGchr7v27128,474,162 - 128,474,244UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2438 2788 2253 4973 1723 2348 6 621 1947 462 2269 7294 6465 53 3734 1 848 1741 1617 174 1


1 to 30 of 33 rows
RefSeq Transcripts NM_001134336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006716069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011516435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017012472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047420657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054358707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054358708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054358709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054358710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054358711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054358712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054358713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001744839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001744840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001744841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_927493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB032996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC009244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK290165 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH236950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 33 rows

Ensembl Acc Id: ENST00000249344   ⟹   ENSP00000249344
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7129,434,432 - 129,488,399 (+)Ensembl
Ensembl Acc Id: ENST00000435494   ⟹   ENSP00000392393
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7129,434,446 - 129,483,631 (+)Ensembl
Ensembl Acc Id: ENST00000465033
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7129,458,242 - 129,460,548 (+)Ensembl
RefSeq Acc Id: NM_001134336   ⟹   NP_001127808
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,483,631 (+)NCBI
GRCh377129,074,274 - 129,128,240 (+)RGD
Celera7123,871,017 - 123,924,972 (+)RGD
HuRef7123,435,594 - 123,489,594 (+)ENTREZGENE
CHM1_17129,007,840 - 129,057,038 (+)NCBI
T2T-CHM13v2.07130,747,403 - 130,796,702 (+)NCBI
CRA_TCAGchr7v27128,458,245 - 128,512,203 (+)ENTREZGENE
Sequence:
RefSeq Acc Id: NM_020704   ⟹   NP_065755
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,488,399 (+)NCBI
GRCh377129,074,274 - 129,128,240 (+)RGD
Build 367128,861,536 - 128,915,473 (+)NCBI Archive
Celera7123,871,017 - 123,924,972 (+)RGD
HuRef7123,435,594 - 123,489,594 (+)ENTREZGENE
CHM1_17129,007,840 - 129,061,781 (+)NCBI
T2T-CHM13v2.07130,747,403 - 130,801,465 (+)NCBI
CRA_TCAGchr7v27128,458,245 - 128,512,203 (+)ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006716069   ⟹   XP_006716132
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,488,399 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011516432   ⟹   XP_011514734
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,452,120 - 129,488,399 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011516435   ⟹   XP_011514737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,463,040 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017012470   ⟹   XP_016867959
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,480,878 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017012471   ⟹   XP_016867960
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,454,142 - 129,488,399 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047420656   ⟹   XP_047276612
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,464,141 (+)NCBI
RefSeq Acc Id: XM_047420657   ⟹   XP_047276613
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,456,700 - 129,488,399 (+)NCBI
RefSeq Acc Id: XM_054358707   ⟹   XP_054214682
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,747,403 - 130,801,465 (+)NCBI
RefSeq Acc Id: XM_054358708   ⟹   XP_054214683
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,747,403 - 130,793,945 (+)NCBI
RefSeq Acc Id: XM_054358709   ⟹   XP_054214684
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,765,083 - 130,801,465 (+)NCBI
RefSeq Acc Id: XM_054358710   ⟹   XP_054214685
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,767,105 - 130,801,465 (+)NCBI
RefSeq Acc Id: XM_054358711   ⟹   XP_054214686
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,747,403 - 130,777,104 (+)NCBI
RefSeq Acc Id: XM_054358712   ⟹   XP_054214687
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,747,403 - 130,776,003 (+)NCBI
RefSeq Acc Id: XM_054358713   ⟹   XP_054214688
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,769,663 - 130,801,465 (+)NCBI
RefSeq Acc Id: XR_001744840
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,463,004 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001744841
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,463,004 (+)NCBI
Sequence:
RefSeq Acc Id: XR_008487707
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,747,403 - 130,775,967 (+)NCBI
RefSeq Acc Id: XR_008487708
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,747,403 - 130,775,967 (+)NCBI
RefSeq Acc Id: XR_008487709
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.07130,747,403 - 130,776,003 (+)NCBI
RefSeq Acc Id: XR_927493
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,432 - 129,463,040 (+)NCBI
Sequence:
1 to 28 of 28 rows
Protein RefSeqs NP_001127808 (Get FASTA)   NCBI Sequence Viewer  
  NP_065755 (Get FASTA)   NCBI Sequence Viewer  
  XP_006716132 (Get FASTA)   NCBI Sequence Viewer  
  XP_011514734 (Get FASTA)   NCBI Sequence Viewer  
  XP_011514737 (Get FASTA)   NCBI Sequence Viewer  
  XP_016867959 (Get FASTA)   NCBI Sequence Viewer  
  XP_016867960 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276612 (Get FASTA)   NCBI Sequence Viewer  
  XP_047276613 (Get FASTA)   NCBI Sequence Viewer  
  XP_054214682 (Get FASTA)   NCBI Sequence Viewer  
  XP_054214683 (Get FASTA)   NCBI Sequence Viewer  
  XP_054214684 (Get FASTA)   NCBI Sequence Viewer  
  XP_054214685 (Get FASTA)   NCBI Sequence Viewer  
  XP_054214686 (Get FASTA)   NCBI Sequence Viewer  
  XP_054214687 (Get FASTA)   NCBI Sequence Viewer  
  XP_054214688 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH19064 (Get FASTA)   NCBI Sequence Viewer  
  BAA86484 (Get FASTA)   NCBI Sequence Viewer  
  BAF82854 (Get FASTA)   NCBI Sequence Viewer  
  BAH13679 (Get FASTA)   NCBI Sequence Viewer  
  EAL24101 (Get FASTA)   NCBI Sequence Viewer  
  EAW83719 (Get FASTA)   NCBI Sequence Viewer  
  EAW83720 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000249344
  ENSP00000249344.2
  ENSP00000392393
  ENSP00000392393.2
GenBank Protein Q9ULQ0 (Get FASTA)   NCBI Sequence Viewer  
1 to 28 of 28 rows
1 to 5 of 18 rows
1 to 5 of 18 rows
RefSeq Acc Id: NP_065755   ⟸   NM_020704
- Peptide Label: isoform a
- UniProtKB: Q8WUZ4 (UniProtKB/Swiss-Prot),   Q9ULQ0 (UniProtKB/Swiss-Prot),   A8K2A0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001127808   ⟸   NM_001134336
- Peptide Label: isoform b
- UniProtKB: A8K2A0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006716132   ⟸   XM_006716069
- Peptide Label: isoform X1
- UniProtKB: A8K2A0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011514737   ⟸   XM_011516435
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_011514734   ⟸   XM_011516432
- Peptide Label: isoform X3
- UniProtKB: A8K2A0 (UniProtKB/TrEMBL)
- Sequence:
Name Modeler Protein Id AA Range Protein Structure
AF-Q9ULQ0-F1-model_v2 AlphaFold Q9ULQ0 1-834 view protein structure

RGD ID:6805655
Promoter ID:HG_KWN:59661
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001134336,   NM_020704,   UC003VOX.1
Position:
Human AssemblyChrPosition (strand)Source
Build 367128,861,121 - 128,861,621 (+)MPROMDB
RGD ID:7211901
Promoter ID:EPDNEW_H11696
Type:initiation region
Name:STRIP2_1
Description:striatin interacting protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,434,433 - 129,434,493EPDNEW


1 to 26 of 26 rows
Database
Acc Id
Source(s)
COSMIC STRIP2 COSMIC
Ensembl Genes ENSG00000128578 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000249344 ENTREZGENE
  ENST00000249344.7 UniProtKB/Swiss-Prot
  ENST00000435494 ENTREZGENE
  ENST00000435494.2 UniProtKB/Swiss-Prot
GTEx ENSG00000128578 GTEx
HGNC ID HGNC:22209 ENTREZGENE
Human Proteome Map STRIP2 Human Proteome Map
InterPro Far11/STRP UniProtKB/Swiss-Prot
  Far11/STRP_C UniProtKB/Swiss-Prot
  Far11/STRP_N UniProtKB/Swiss-Prot
KEGG Report hsa:57464 UniProtKB/Swiss-Prot
NCBI Gene 57464 ENTREZGENE
OMIM 617919 OMIM
PANTHER PTHR13239 UniProtKB/Swiss-Prot
  STRIATIN-INTERACTING PROTEIN 2 UniProtKB/Swiss-Prot
Pfam DUF3402 UniProtKB/Swiss-Prot
  N1221 UniProtKB/Swiss-Prot
PharmGKB PA134923427 PharmGKB
SMART DUF3402 UniProtKB/Swiss-Prot
  N1221 UniProtKB/Swiss-Prot
UniProt A8K2A0 ENTREZGENE, UniProtKB/TrEMBL
  Q8WUZ4 ENTREZGENE
  Q9ULQ0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q8WUZ4 UniProtKB/Swiss-Prot
1 to 26 of 26 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-11-15 STRIP2  striatin interacting protein 2  FAM40B  family with sequence similarity 40, member B  Symbol and/or name change 5135510 APPROVED