CYB561 (cytochrome b561) - Rat Genome Database

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Gene: CYB561 (cytochrome b561) Homo sapiens
Analyze
Symbol: CYB561
Name: cytochrome b561
RGD ID: 1322199
HGNC Page HGNC:2571
Description: Predicted to enable transmembrane monodehydroascorbate reductase activity. Predicted to be involved in ascorbate homeostasis. Predicted to be located in chromaffin granule membrane. Predicted to be active in lysosomal membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: CGCytb; chromaffin granule CYB561; CYB561A1; cytochrome b-561; cytochrome b561 family, member A1; ferric-chelate reductase 2; FRRS2; ORTHYP2; transmembrane ascorbate-dependent reductase CYB561
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381763,432,304 - 63,446,639 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1763,432,304 - 63,446,354 (-)EnsemblGRCh38hg38GRCh38
GRCh371761,509,665 - 61,524,000 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361758,863,397 - 58,877,454 (-)NCBINCBI36Build 36hg18NCBI36
Build 341758,864,160 - 58,877,395NCBI
Celera1755,897,897 - 55,911,954 (-)NCBICelera
Cytogenetic Map17q23.3NCBI
HuRef1756,878,024 - 56,892,081 (-)NCBIHuRef
CHM1_11761,573,809 - 61,587,854 (-)NCBICHM1_1
T2T-CHM13v2.01764,302,512 - 64,316,846 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2-palmitoylglycerol  (EXP)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (ISO)
acrylamide  (EXP,ISO)
all-trans-retinoic acid  (EXP)
amitrole  (ISO)
arsane  (EXP)
arsenic atom  (EXP)
atrazine  (ISO)
benzo[a]pyrene  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
butanal  (EXP)
cadmium sulfate  (ISO)
carbon nanotube  (ISO)
CGP 52608  (EXP)
chlorpyrifos  (ISO)
copper(II) sulfate  (EXP)
coumarin  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (EXP)
dexamethasone  (EXP,ISO)
diazinon  (EXP)
diclofenac  (ISO)
diethylstilbestrol  (ISO)
diuron  (ISO)
dorsomorphin  (EXP)
doxorubicin  (EXP)
endosulfan  (ISO)
entinostat  (EXP)
epoxiconazole  (ISO)
ethanol  (ISO)
folpet  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
indometacin  (EXP)
lipopolysaccharide  (ISO)
mercury atom  (EXP)
mercury(0)  (EXP)
methotrexate  (EXP)
N-nitrosodiethylamine  (ISO)
niclosamide  (EXP)
paracetamol  (ISO)
pentanal  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propanal  (EXP)
rotenone  (ISO)
SB 431542  (EXP)
sodium arsenate  (ISO)
sodium arsenite  (EXP)
sodium dichromate  (ISO)
streptozocin  (ISO)
sulfadimethoxine  (ISO)
tert-butyl hydroperoxide  (EXP)
testosterone  (EXP)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
thiram  (EXP)
triphenyl phosphate  (EXP)
urethane  (EXP)
valproic acid  (EXP)
vancomycin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7096323   PMID:7559396   PMID:7959749   PMID:7980462   PMID:12477932   PMID:12768339   PMID:12837283   PMID:14499595   PMID:14702039   PMID:15489334   PMID:18029348   PMID:18180394  
PMID:20680310   PMID:21516116   PMID:21873635   PMID:23249217   PMID:24140660   PMID:24623722   PMID:25340798   PMID:25416956   PMID:28514442   PMID:29117863   PMID:29343526   PMID:32296183  
PMID:33961781   PMID:36949045   PMID:37584287   PMID:37634562   PMID:38039324   PMID:39135107  


Genomics

Comparative Map Data
CYB561
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381763,432,304 - 63,446,639 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1763,432,304 - 63,446,354 (-)EnsemblGRCh38hg38GRCh38
GRCh371761,509,665 - 61,524,000 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361758,863,397 - 58,877,454 (-)NCBINCBI36Build 36hg18NCBI36
Build 341758,864,160 - 58,877,395NCBI
Celera1755,897,897 - 55,911,954 (-)NCBICelera
Cytogenetic Map17q23.3NCBI
HuRef1756,878,024 - 56,892,081 (-)NCBIHuRef
CHM1_11761,573,809 - 61,587,854 (-)NCBICHM1_1
T2T-CHM13v2.01764,302,512 - 64,316,846 (-)NCBIT2T-CHM13v2.0
Cyb561
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911105,824,528 - 105,844,157 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11105,824,528 - 105,844,162 (-)EnsemblGRCm39 Ensembl
GRCm3811105,933,702 - 105,945,019 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11105,933,702 - 105,953,336 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711105,795,018 - 105,805,461 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611105,749,794 - 105,760,237 (-)NCBIMGSCv36mm8
Celera11117,665,406 - 117,675,846 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1168.81NCBI
Cyb561
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81091,377,866 - 91,388,548 (-)NCBIGRCr8
mRatBN7.21090,878,052 - 90,888,734 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1090,878,054 - 90,884,787 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1095,924,924 - 95,935,491 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01095,388,099 - 95,398,666 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01090,806,834 - 90,817,406 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01094,136,993 - 94,147,567 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1094,136,993 - 94,147,621 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01093,889,861 - 93,896,347 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41095,328,354 - 95,334,603 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11095,342,723 - 95,348,415 (-)NCBI
Celera1089,556,287 - 89,566,846 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
LOC102028532
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554788,362,190 - 8,366,947 (+)NCBIChiLan1.0ChiLan1.0
LOC100993774
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21979,605,600 - 79,622,497 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11784,423,188 - 84,437,289 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01757,513,820 - 57,528,326 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11762,660,598 - 62,674,396 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1762,660,598 - 62,674,396 (-)Ensemblpanpan1.1panPan2
CYB561
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1911,461,738 - 11,474,413 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl911,463,585 - 11,468,282 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha912,422,460 - 12,435,072 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0913,124,956 - 13,137,576 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl913,124,958 - 13,138,143 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1912,069,929 - 12,082,538 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0915,449,455 - 15,462,055 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0915,452,182 - 15,464,811 (+)NCBIUU_Cfam_GSD_1.0
LOC101968635
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560215,063,815 - 15,071,411 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365414,123,202 - 4,132,835 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365414,123,187 - 4,130,819 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CYB561
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1215,436,803 - 15,447,100 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11215,435,973 - 15,447,104 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21215,422,536 - 15,433,707 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CYB561
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11657,831,350 - 57,850,225 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1657,839,614 - 57,844,989 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607728,448,253 - 28,479,946 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101699814
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624849949,533 - 962,404 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624849950,275 - 961,946 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CYB561
25 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 17q21.33-24.2(chr17:36449220-68170214)x3 copy number gain See cases [RCV000050957] Chr17:36449220..68170214 [GRCh38]
Chr17:48563237..65936105 [GRCh37]
Chr17:45918236..63677950 [NCBI36]
Chr17:17q21.33-24.2		 pathogenic
GRCh38/hg38 17q23.2-25.3(chr17:36449220-83086677)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052483]|See cases [RCV000052483] Chr17:36449220..83086677 [GRCh38]
Chr17:58617905..81044553 [GRCh37]
Chr17:55972687..78637842 [NCBI36]
Chr17:17q23.2-25.3		 pathogenic
GRCh37/hg19 17q23-24(chr17:59209629-64222315)x3 copy number gain See cases [RCV000052485] Chr17:59209629..64222315 [GRCh37]
Chr17:56564411..61652777 [NCBI36]
Chr17:17q23-24		 pathogenic
GRCh38/hg38 17q23.1-25.1(chr17:36449220-75053130)x3 copy number gain See cases [RCV000137437] Chr17:36449220..75053130 [GRCh38]
Chr17:57595736..73049225 [GRCh37]
Chr17:54950518..70560820 [NCBI36]
Chr17:17q23.1-25.1		 pathogenic
GRCh37/hg19 17q22-23.3(chr17:56321134-62080001)x3 copy number gain See cases [RCV000240364] Chr17:56321134..62080001 [GRCh37]
Chr17:17q22-23.3		 pathogenic
GRCh37/hg19 17q21.31-25.3(chr17:42580684-81085615)x3 copy number gain See cases [RCV000447823] Chr17:42580684..81085615 [GRCh37]
Chr17:17q21.31-25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938) copy number gain See cases [RCV000511439] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:526-81041938)x3 copy number gain See cases [RCV000512441] Chr17:526..81041938 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
NM_001915.4(CYB561):c.131G>A (p.Trp44Ter) single nucleotide variant Orthostatic hypotension 2 [RCV000721912] Chr17:63437417 [GRCh38]
Chr17:61514778 [GRCh37]
Chr17:17q23.3		 pathogenic
NM_001915.4(CYB561):c.262G>A (p.Gly88Arg) single nucleotide variant Orthostatic hypotension 2 [RCV000721911] Chr17:63436093 [GRCh38]
Chr17:61513454 [GRCh37]
Chr17:17q23.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:8547-81060040)x3 copy number gain not provided [RCV000739324] Chr17:8547..81060040 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:7214-81058310)x3 copy number gain not provided [RCV000739320] Chr17:7214..81058310 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17p13.3-q25.3(chr17:12344-81057996)x3 copy number gain not provided [RCV000739325] Chr17:12344..81057996 [GRCh37]
Chr17:17p13.3-q25.3		 pathogenic
GRCh37/hg19 17q23.2-24.2(chr17:59597348-64886364)x3 copy number gain not provided [RCV000752158] Chr17:59597348..64886364 [GRCh37]
Chr17:17q23.2-24.2		 pathogenic
GRCh37/hg19 17q22-24.2(chr17:57357088-66306668) copy number gain not provided [RCV000767764] Chr17:57357088..66306668 [GRCh37]
Chr17:17q22-24.2		 pathogenic
GRCh37/hg19 17q23.3(chr17:61347958-61537402)x3 copy number gain not provided [RCV000849673] Chr17:61347958..61537402 [GRCh37]
Chr17:17q23.3		 uncertain significance
GRCh37/hg19 17q23.1-24.2(chr17:57869604-67078443)x3 copy number gain not provided [RCV000845965] Chr17:57869604..67078443 [GRCh37]
Chr17:17q23.1-24.2		 pathogenic
NM_001915.4(CYB561):c.463C>T (p.Arg155Cys) single nucleotide variant not specified [RCV004263144] Chr17:63435186 [GRCh38]
Chr17:61512547 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.343G>A (p.Ala115Thr) single nucleotide variant not specified [RCV004112594] Chr17:63435750 [GRCh38]
Chr17:61513111 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.319G>A (p.Asp107Asn) single nucleotide variant not specified [RCV004245525] Chr17:63435774 [GRCh38]
Chr17:61513135 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.640G>A (p.Ala214Thr) single nucleotide variant not specified [RCV004140662] Chr17:63434518 [GRCh38]
Chr17:61511879 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.439G>C (p.Gly147Arg) single nucleotide variant not specified [RCV004093337] Chr17:63435210 [GRCh38]
Chr17:61512571 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.464G>A (p.Arg155His) single nucleotide variant not specified [RCV004207448] Chr17:63435185 [GRCh38]
Chr17:61512546 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.457C>T (p.Arg153Trp) single nucleotide variant not specified [RCV004215941] Chr17:63435192 [GRCh38]
Chr17:61512553 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.278T>C (p.Phe93Ser) single nucleotide variant not specified [RCV004172466] Chr17:63436077 [GRCh38]
Chr17:61513438 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.337G>A (p.Gly113Ser) single nucleotide variant not specified [RCV004205552] Chr17:63435756 [GRCh38]
Chr17:61513117 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.728C>T (p.Thr243Met) single nucleotide variant not specified [RCV004250948] Chr17:63434430 [GRCh38]
Chr17:61511791 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.514G>A (p.Val172Met) single nucleotide variant not specified [RCV004340093] Chr17:63435135 [GRCh38]
Chr17:61512496 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.418T>C (p.Phe140Leu) single nucleotide variant not specified [RCV004334466] Chr17:63435231 [GRCh38]
Chr17:61512592 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.424T>C (p.Phe142Leu) single nucleotide variant not specified [RCV004334467] Chr17:63435225 [GRCh38]
Chr17:61512586 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.701C>G (p.Ala234Gly) single nucleotide variant not specified [RCV004367641] Chr17:63434457 [GRCh38]
Chr17:61511818 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.650A>G (p.Tyr217Cys) single nucleotide variant not specified [RCV004367639] Chr17:63434508 [GRCh38]
Chr17:61511869 [GRCh37]
Chr17:17q23.3		 uncertain significance
GRCh37/hg19 17q23.2-23.3(chr17:58596397-62540700)x3 copy number gain See cases [RCV004442795] Chr17:58596397..62540700 [GRCh37]
Chr17:17q23.2-23.3		 uncertain significance
NM_001915.4(CYB561):c.561C>T (p.Leu187=) single nucleotide variant CYB561-related disorder [RCV003943967] Chr17:63435088 [GRCh38]
Chr17:61512449 [GRCh37]
Chr17:17q23.3		 likely benign
NM_001915.4(CYB561):c.44A>T (p.Tyr15Phe) single nucleotide variant not specified [RCV004367638] Chr17:63437504 [GRCh38]
Chr17:61514865 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.676C>T (p.Arg226Trp) single nucleotide variant not specified [RCV004367640] Chr17:63434482 [GRCh38]
Chr17:61511843 [GRCh37]
Chr17:17q23.3		 uncertain significance
NM_001915.4(CYB561):c.-13-2648G>A single nucleotide variant CYB561-related disorder [RCV003979347] Chr17:63440208 [GRCh38]
Chr17:61517569 [GRCh37]
Chr17:17q23.3		 benign
NM_001915.4(CYB561):c.24C>T (p.Ala8=) single nucleotide variant CYB561-related disorder [RCV003982419] Chr17:63437524 [GRCh38]
Chr17:61514885 [GRCh37]
Chr17:17q23.3		 likely benign
NM_001915.4(CYB561):c.318C>T (p.Phe106=) single nucleotide variant CYB561-related disorder [RCV003927176] Chr17:63435775 [GRCh38]
Chr17:61513136 [GRCh37]
Chr17:17q23.3		 likely benign
NM_001915.4(CYB561):c.606C>T (p.Asn202=) single nucleotide variant CYB561-related disorder [RCV003959705] Chr17:63434552 [GRCh38]
Chr17:61511913 [GRCh37]
Chr17:17q23.3		 likely benign
NM_001915.4(CYB561):c.207G>A (p.Leu69=) single nucleotide variant CYB561-related disorder [RCV003906847] Chr17:63436148 [GRCh38]
Chr17:61513509 [GRCh37]
Chr17:17q23.3		 benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:11519
Count of miRNA genes:1251
Interacting mature miRNAs:1612
Transcripts:ENST00000360793, ENST00000392975, ENST00000392976, ENST00000448884, ENST00000542042, ENST00000577368, ENST00000577989, ENST00000578016, ENST00000578072, ENST00000580592, ENST00000580691, ENST00000581163, ENST00000581573, ENST00000582034, ENST00000582143, ENST00000582297, ENST00000582997, ENST00000583478, ENST00000584031, ENST00000584291, ENST00000585153
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
WI-18928  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371761,510,653 - 61,510,783UniSTSGRCh37
Build 361758,864,385 - 58,864,515RGDNCBI36
Celera1755,898,885 - 55,899,015RGD
Cytogenetic Map17q23.3UniSTS
HuRef1756,879,012 - 56,879,142UniSTS
GeneMap99-GB4 RH Map17399.38UniSTS
Whitehead-RH Map17457.2UniSTS
RH79732  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371761,509,804 - 61,510,041UniSTSGRCh37
Build 361758,863,536 - 58,863,773RGDNCBI36
Celera1755,898,036 - 55,898,273RGD
Cytogenetic Map17q23.3UniSTS
HuRef1756,878,163 - 56,878,400UniSTS
STS-W04622  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371761,509,805 - 61,509,931UniSTSGRCh37
Build 361758,863,537 - 58,863,663RGDNCBI36
Celera1755,898,037 - 55,898,163RGD
Cytogenetic Map17q23.3UniSTS
HuRef1756,878,164 - 56,878,290UniSTS
GeneMap99-GB4 RH Map17402.15UniSTS
RH79080  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371761,509,799 - 61,509,937UniSTSGRCh37
Build 361758,863,531 - 58,863,669RGDNCBI36
Celera1755,898,031 - 55,898,169RGD
Cytogenetic Map17q23.3UniSTS
HuRef1756,878,158 - 56,878,296UniSTS
GeneMap99-GB4 RH Map17401.53UniSTS
NCBI RH Map17675.8UniSTS
RH70593  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371761,510,697 - 61,510,884UniSTSGRCh37
Build 361758,864,429 - 58,864,616RGDNCBI36
Celera1755,898,929 - 55,899,116RGD
Cytogenetic Map17q23.3UniSTS
HuRef1756,879,056 - 56,879,243UniSTS
GeneMap99-GB4 RH Map17401.53UniSTS
NCBI RH Map17675.8UniSTS
D8S2278  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map3p25.3-p24.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map10q11UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map12q21.31UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map7q34-q35UniSTS
Cytogenetic MapXp22.1UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map4q34.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map6p22UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map2p23.1UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map12p12.3UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map15q22.1UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map14q22UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map14q12-q13UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map4q31UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map15q15-q21.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic MapXq26.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map3p12.1UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map12q14.3-q15UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map21q21.1UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1p13-p12UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map10q21.1UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map14q31UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
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Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS
G30452  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17q23.3UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
visual system
1204 2436 2788 2243 4955 1726 2351 5 624 1935 465 2268 7281 6450 52 3720 1 851 1742 1616 175 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001017916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001017917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001330421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC005828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH006620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK026598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK095244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC091485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF206825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM552101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT007096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA446358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR989466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000360793   ⟹   ENSP00000354028
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,432,304 - 63,446,306 (-)Ensembl
Ensembl Acc Id: ENST00000392975   ⟹   ENSP00000376701
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,432,304 - 63,440,866 (-)Ensembl
Ensembl Acc Id: ENST00000392976   ⟹   ENSP00000376702
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,432,307 - 63,446,184 (-)Ensembl
Ensembl Acc Id: ENST00000448884   ⟹   ENSP00000400350
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,433,564 - 63,446,291 (-)Ensembl
Ensembl Acc Id: ENST00000542042   ⟹   ENSP00000442773
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,434,140 - 63,438,311 (-)Ensembl
Ensembl Acc Id: ENST00000577368
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,435,415 - 63,446,306 (-)Ensembl
Ensembl Acc Id: ENST00000577989
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,434,478 - 63,446,308 (-)Ensembl
Ensembl Acc Id: ENST00000578016
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,435,558 - 63,446,340 (-)Ensembl
Ensembl Acc Id: ENST00000578072   ⟹   ENSP00000464193
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,435,712 - 63,446,354 (-)Ensembl
Ensembl Acc Id: ENST00000580592   ⟹   ENSP00000463680
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,437,372 - 63,440,839 (-)Ensembl
Ensembl Acc Id: ENST00000580691   ⟹   ENSP00000462545
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,434,192 - 63,438,170 (-)Ensembl
Ensembl Acc Id: ENST00000581163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,434,261 - 63,436,706 (-)Ensembl
Ensembl Acc Id: ENST00000581573   ⟹   ENSP00000462325
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,433,216 - 63,437,949 (-)Ensembl
Ensembl Acc Id: ENST00000582034   ⟹   ENSP00000464520
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,433,964 - 63,446,306 (-)Ensembl
Ensembl Acc Id: ENST00000582143
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,434,331 - 63,435,399 (-)Ensembl
Ensembl Acc Id: ENST00000582297   ⟹   ENSP00000464470
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,433,145 - 63,446,294 (-)Ensembl
Ensembl Acc Id: ENST00000582997   ⟹   ENSP00000464215
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,434,314 - 63,440,211 (-)Ensembl
Ensembl Acc Id: ENST00000583478
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,437,087 - 63,446,331 (-)Ensembl
Ensembl Acc Id: ENST00000584031   ⟹   ENSP00000463162
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,432,305 - 63,446,184 (-)Ensembl
Ensembl Acc Id: ENST00000584291   ⟹   ENSP00000462543
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,434,403 - 63,442,852 (-)Ensembl
Ensembl Acc Id: ENST00000585153   ⟹   ENSP00000464012
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1763,433,909 - 63,435,184 (-)Ensembl
RefSeq Acc Id: NM_001017916   ⟹   NP_001017916
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,432,304 - 63,446,639 (-)NCBI
GRCh371761,509,665 - 61,523,724 (-)NCBI
Build 361758,863,397 - 58,877,277 (-)NCBI Archive
HuRef1756,878,024 - 56,892,081 (-)ENTREZGENE
CHM1_11761,573,809 - 61,587,677 (-)NCBI
T2T-CHM13v2.01764,302,512 - 64,316,846 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001017917   ⟹   NP_001017917
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,432,304 - 63,440,827 (-)NCBI
GRCh371761,509,665 - 61,523,724 (-)NCBI
Build 361758,863,397 - 58,871,939 (-)NCBI Archive
HuRef1756,878,024 - 56,892,081 (-)ENTREZGENE
CHM1_11761,573,809 - 61,582,339 (-)NCBI
T2T-CHM13v2.01764,302,512 - 64,311,035 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001330421   ⟹   NP_001317350
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,432,304 - 63,440,267 (-)NCBI
T2T-CHM13v2.01764,302,512 - 64,310,475 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001915   ⟹   NP_001906
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,432,304 - 63,446,306 (-)NCBI
GRCh371761,509,665 - 61,523,724 (-)NCBI
Build 361758,863,397 - 58,877,454 (-)NCBI Archive
HuRef1756,878,024 - 56,892,081 (-)ENTREZGENE
CHM1_11761,573,809 - 61,587,854 (-)NCBI
T2T-CHM13v2.01764,302,512 - 64,316,513 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001017916 (Get FASTA)   NCBI Sequence Viewer  
  NP_001017917 (Get FASTA)   NCBI Sequence Viewer  
  NP_001317350 (Get FASTA)   NCBI Sequence Viewer  
  NP_001906 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC50212 (Get FASTA)   NCBI Sequence Viewer  
  AAH00021 (Get FASTA)   NCBI Sequence Viewer  
  AAH02976 (Get FASTA)   NCBI Sequence Viewer  
  AAH91485 (Get FASTA)   NCBI Sequence Viewer  
  AAP35760 (Get FASTA)   NCBI Sequence Viewer  
  BAG38193 (Get FASTA)   NCBI Sequence Viewer  
  BAG53013 (Get FASTA)   NCBI Sequence Viewer  
  BAH11756 (Get FASTA)   NCBI Sequence Viewer  
  BAH11829 (Get FASTA)   NCBI Sequence Viewer  
  BAH13511 (Get FASTA)   NCBI Sequence Viewer  
  BAH13913 (Get FASTA)   NCBI Sequence Viewer  
  EAW94322 (Get FASTA)   NCBI Sequence Viewer  
  EAW94323 (Get FASTA)   NCBI Sequence Viewer  
  EAW94324 (Get FASTA)   NCBI Sequence Viewer  
  EAW94325 (Get FASTA)   NCBI Sequence Viewer  
  EAW94326 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000354028
  ENSP00000354028.3
  ENSP00000376701
  ENSP00000376701.2
  ENSP00000376702
  ENSP00000376702.1
  ENSP00000400350.2
  ENSP00000442773.1
  ENSP00000462325.1
  ENSP00000462543.1
  ENSP00000462545.1
  ENSP00000463162.1
  ENSP00000463680.1
  ENSP00000464012.1
  ENSP00000464193.1
  ENSP00000464215
  ENSP00000464215.1
  ENSP00000464470.1
  ENSP00000464520.1
GenBank Protein P49447 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001906   ⟸   NM_001915
- Peptide Label: isoform 1
- UniProtKB: Q9BU05 (UniProtKB/Swiss-Prot),   Q5BJG9 (UniProtKB/Swiss-Prot),   D3DU11 (UniProtKB/Swiss-Prot),   B7Z775 (UniProtKB/Swiss-Prot),   B2RE96 (UniProtKB/Swiss-Prot),   Q9BWR9 (UniProtKB/Swiss-Prot),   P49447 (UniProtKB/Swiss-Prot),   J3QS47 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001017916   ⟸   NM_001017916
- Peptide Label: isoform 1
- UniProtKB: Q9BU05 (UniProtKB/Swiss-Prot),   Q5BJG9 (UniProtKB/Swiss-Prot),   D3DU11 (UniProtKB/Swiss-Prot),   B7Z775 (UniProtKB/Swiss-Prot),   B2RE96 (UniProtKB/Swiss-Prot),   Q9BWR9 (UniProtKB/Swiss-Prot),   P49447 (UniProtKB/Swiss-Prot),   J3QS47 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001017917   ⟸   NM_001017917
- Peptide Label: isoform 1
- UniProtKB: Q9BU05 (UniProtKB/Swiss-Prot),   Q5BJG9 (UniProtKB/Swiss-Prot),   D3DU11 (UniProtKB/Swiss-Prot),   B7Z775 (UniProtKB/Swiss-Prot),   B2RE96 (UniProtKB/Swiss-Prot),   Q9BWR9 (UniProtKB/Swiss-Prot),   P49447 (UniProtKB/Swiss-Prot),   J3QS47 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001317350   ⟸   NM_001330421
- Peptide Label: isoform 2
- UniProtKB: J3QRH5 (UniProtKB/TrEMBL),   J3QS47 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000462545   ⟸   ENST00000580691
Ensembl Acc Id: ENSP00000463680   ⟸   ENST00000580592
Ensembl Acc Id: ENSP00000442773   ⟸   ENST00000542042
Ensembl Acc Id: ENSP00000462325   ⟸   ENST00000581573
Ensembl Acc Id: ENSP00000464470   ⟸   ENST00000582297
Ensembl Acc Id: ENSP00000464520   ⟸   ENST00000582034
Ensembl Acc Id: ENSP00000464215   ⟸   ENST00000582997
Ensembl Acc Id: ENSP00000462543   ⟸   ENST00000584291
Ensembl Acc Id: ENSP00000463162   ⟸   ENST00000584031
Ensembl Acc Id: ENSP00000354028   ⟸   ENST00000360793
Ensembl Acc Id: ENSP00000464012   ⟸   ENST00000585153
Ensembl Acc Id: ENSP00000376701   ⟸   ENST00000392975
Ensembl Acc Id: ENSP00000376702   ⟸   ENST00000392976
Ensembl Acc Id: ENSP00000464193   ⟸   ENST00000578072
Ensembl Acc Id: ENSP00000400350   ⟸   ENST00000448884
Protein Domains
Cytochrome b561

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P49447-F1-model_v2 AlphaFold P49447 1-251 view protein structure

Promoters
RGD ID:6853004
Promoter ID:EP74322
Type:multiple initiation site
Name:HS_CYB561
Description:Cytochrome b-561.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 361758,868,654 - 58,868,714EPD
RGD ID:6793901
Promoter ID:HG_KWN:26815
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   K562,   Lymphoblastoid
Transcripts:NM_001017916,   NM_001915,   UC010DDT.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361758,876,956 - 58,878,357 (-)MPROMDB
RGD ID:7235937
Promoter ID:EPDNEW_H23715
Type:initiation region
Name:CYB561_4
Description:cytochrome b561
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23716  EPDNEW_H23717  EPDNEW_H23718  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,437,561 - 63,437,621EPDNEW
RGD ID:7235939
Promoter ID:EPDNEW_H23716
Type:initiation region
Name:CYB561_3
Description:cytochrome b561
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23715  EPDNEW_H23717  EPDNEW_H23718  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,440,863 - 63,440,923EPDNEW
RGD ID:7235941
Promoter ID:EPDNEW_H23717
Type:initiation region
Name:CYB561_1
Description:cytochrome b561
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23715  EPDNEW_H23716  EPDNEW_H23718  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,446,306 - 63,446,366EPDNEW
RGD ID:7235945
Promoter ID:EPDNEW_H23718
Type:initiation region
Name:CYB561_2
Description:cytochrome b561
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23715  EPDNEW_H23716  EPDNEW_H23717  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381763,447,004 - 63,447,064EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:2571 AgrOrtholog
COSMIC CYB561 COSMIC
Ensembl Genes ENSG00000008283 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000360793 ENTREZGENE
  ENST00000360793.8 UniProtKB/Swiss-Prot
  ENST00000392975 ENTREZGENE
  ENST00000392975.6 UniProtKB/Swiss-Prot
  ENST00000392976 ENTREZGENE
  ENST00000392976.5 UniProtKB/Swiss-Prot
  ENST00000448884.6 UniProtKB/Swiss-Prot
  ENST00000542042.5 UniProtKB/TrEMBL
  ENST00000578072.1 UniProtKB/TrEMBL
  ENST00000580592.1 UniProtKB/TrEMBL
  ENST00000580691.5 UniProtKB/TrEMBL
  ENST00000581573.5 UniProtKB/Swiss-Prot
  ENST00000582034.5 UniProtKB/TrEMBL
  ENST00000582297.5 UniProtKB/TrEMBL
  ENST00000582997 ENTREZGENE
  ENST00000582997.5 UniProtKB/TrEMBL
  ENST00000584031.5 UniProtKB/TrEMBL
  ENST00000584291.5 UniProtKB/Swiss-Prot
  ENST00000585153.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1770 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000008283 GTEx
HGNC ID HGNC:2571 ENTREZGENE
Human Proteome Map CYB561 Human Proteome Map
InterPro CYB561/CYBRD1-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_b561/ferric_Rdtase_TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:1534 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 1534 ENTREZGENE
OMIM 600019 OMIM
PANTHER PTHR10106 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10106:SF14 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Cytochrom_B561 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA27069 PharmGKB
PROSITE CYTOCHROME_B561 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART B561 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2RE96 ENTREZGENE
  B3KTA1_HUMAN UniProtKB/TrEMBL
  B7Z775 ENTREZGENE
  CY561_HUMAN UniProtKB/Swiss-Prot
  D3DU11 ENTREZGENE
  F5H757_HUMAN UniProtKB/TrEMBL
  J3KSL5_HUMAN UniProtKB/TrEMBL
  J3QKN3_HUMAN UniProtKB/TrEMBL
  J3QLS0_HUMAN UniProtKB/TrEMBL
  J3QR25_HUMAN UniProtKB/TrEMBL
  J3QRF9_HUMAN UniProtKB/TrEMBL
  J3QRH5 ENTREZGENE, UniProtKB/TrEMBL
  J3QS09_HUMAN UniProtKB/TrEMBL
  J3QS47 ENTREZGENE, UniProtKB/TrEMBL
  P49447 ENTREZGENE
  Q5BJG9 ENTREZGENE
  Q9BU05 ENTREZGENE
  Q9BWR9 ENTREZGENE
UniProt Secondary B2RE96 UniProtKB/Swiss-Prot
  B7Z775 UniProtKB/Swiss-Prot
  D3DU11 UniProtKB/Swiss-Prot
  Q5BJG9 UniProtKB/Swiss-Prot
  Q9BU05 UniProtKB/Swiss-Prot
  Q9BWR9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-03-19 CYB561  cytochrome b561    cytochrome b-561  Symbol and/or name change 5135510 APPROVED