Actr2 (actin related protein 2) - Rat Genome Database

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Gene: Actr2 (actin related protein 2) Mus musculus
Analyze
Symbol: Actr2
Name: actin related protein 2
RGD ID: 1321953
MGI Page MGI
Description: Predicted to enable cytoskeletal protein binding activity. Predicted to be a structural constituent of cytoskeleton. Predicted to contribute to actin filament binding activity. Acts upstream of or within several processes, including cellular response to type II interferon; meiotic chromosome movement towards spindle pole; and meiotic cytokinesis. Located in actin cap. Is expressed in cochlea and metanephros. Orthologous to human ACTR2 (actin related protein 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4921510D23Rik; A; AA409782; actin-like protein 2; actin-related protein 2; Arp2; ARP2 actin-related protein 2; ARP2 actin-related protein 2 homolog; D6Ertd746; D6Ertd746e; MGC36604
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm6828   Gm9729  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391120,012,304 - 20,062,951 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1120,012,304 - 20,062,913 (-)EnsemblGRCm39 Ensembl
GRCm381120,062,304 - 20,112,951 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1120,062,304 - 20,112,913 (-)EnsemblGRCm38mm10GRCm38
MGSCv371119,962,307 - 20,012,954 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361119,962,307 - 20,012,915 (-)NCBIMGSCv36mm8
Celera1122,204,487 - 22,259,500 (-)NCBICelera
Cytogenetic Map11A3.1NCBI
cM Map1112.88NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Actr2MouseBrain Injuries  ISORGD:131082611530046mRNA, protein:decreased expression:hippocampus (rat)RGD 
Actr2Mousecolorectal carcinoma severityISORGD:132195211570560protein:increased expression:colonic mucosa (human)RGD 
Actr2Mouselung disease  ISORGD:1321952401851918mRNA:decreased expression:lung (human)RGD 
Actr2MousePuromycin Aminonucleoside Nephrosis  ISORGD:131082611530057mRNA, protein:increased expression:cortex of kidney (rat)RGD 

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Object Symbol
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Original Reference(s)
Actr2Mouse1,2-dimethylhydrazine multiple interactionsEXP 6480464[1,2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of ACTR2 mRNACTDPMID:22206623
Actr2Mouse1,2-dimethylhydrazine decreases expressionEXP 64804641,2-Dimethylhydrazine results in decreased expression of ACTR2 mRNACTDPMID:22206623
Actr2Mouse1,8-cineole multiple interactionsEXP 6480464Eucalyptol inhibits the reaction [Glucose results in decreased expression of ACTR2 protein]CTDPMID:31483951
Actr2Mouse17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of ACTR2 mRNACTDPMID:17942748
Actr2Mouse17alpha-ethynylestradiol affects expressionEXP 6480464Ethinyl Estradiol affects the expression of ACTR2 mRNACTDPMID:17555576
Actr2Mouse17alpha-ethynylestradiol multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ACTR2 mRNACTDPMID:17942748
Actr2Mouse2,3,7,8-tetrachlorodibenzodioxine multiple interactionsEXP 6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of ACTR2 mRNACTDPMID:17942748
Actr2Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:13108266480464Tetrachlorodibenzodioxin results in decreased expression of ACTR2 mRNACTDPMID:33387578
Actr2Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionISORGD:13108266480464Tetrachlorodibenzodioxin affects the expression of ACTR2 mRNACTDPMID:34747641
Actr2Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:13108266480464Tetrachlorodibenzodioxin results in increased expression of ACTR2 mRNACTDPMID:32109520
Actr2Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of ACTR2 mRNACTDPMID:24680724
Actr2Mouse2,6-dimethoxyphenol multiple interactionsISORGD:13219526480464[Sodium Chloride co-treated with pyrogallol 1,3-dimethyl ether] results in decreased expression of and affects the more ...CTDPMID:38598786
Actr2Mouse2-methylcholine affects expressionISORGD:13219526480464beta-methylcholine affects the expression of ACTR2 mRNACTDPMID:21179406
Actr2Mouse3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine increases expressionISORGD:13108266480464Puromycin Aminonucleoside results in increased expression of ACTR2 mRNA; Puromycin Aminonucleoside results in increased expression more ...CTDPMID:19617259
Actr2Mouse3,4-methylenedioxymethamphetamine decreases expressionISORGD:13108266480464N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of ACTR2 mRNACTDPMID:30071829
Actr2Mouse3-isobutyl-1-methyl-7H-xanthine multiple interactionsISORGD:13219526480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] more ...CTDPMID:28628672
Actr2Mouse4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of ACTR2 mRNACTDPMID:39298647
Actr2Mouse4,4'-sulfonyldiphenol increases expressionISORGD:13219526480464bisphenol S results in increased expression of ACTR2 proteinCTDPMID:34186270
Actr2Mouse6-propyl-2-thiouracil increases expressionISORGD:13108266480464Propylthiouracil results in increased expression of ACTR2 mRNACTDPMID:30047161
Actr2Mouseactinomycin D multiple interactionsISORGD:13219526480464[Dactinomycin co-treated with nutlin 3] results in increased secretion of ACTR2 proteinCTDPMID:38460933

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Biological Process
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Original Reference(s)
Actr2Mouseactin cytoskeleton organization acts_upstream_of_or_withinIMP 2290270 PMID:21874009MGIPMID:21874009
Actr2MouseArp2/3 complex-mediated actin nucleation involved_inISSUniProtKB:P611602290270 UniProtGO_REF:0000024
Actr2MouseArp2/3 complex-mediated actin nucleation involved_inISOUniProtKB:P611602290270 GO_CentralGO_REF:0000119
Actr2MouseArp2/3 complex-mediated actin nucleation involved_inIBAPANTHER:PTN000233596|dictyBase:DDB_G0272106|WB:WBGene00000200|UniProtKB:P61160|PomBase:SPAC11H11.06|SGD:S0000021872290270 GO_CentralGO_REF:0000033
Actr2Mouseassociative learning  ISORGD:13108269068941 RGDPMID:27720500|REF_RGD_ID:11567211
Actr2Mouseasymmetric cell division acts_upstream_of_or_withinIGIMGI:19213672290270 PMID:21494665MGIPMID:21494665
Actr2Mousecellular response to trichostatin A  ISORGD:13108269068941 RGDPMID:12445420|REF_RGD_ID:632492
Actr2Mousecellular response to type II interferon acts_upstream_of_or_withinIGIMGI:19213672290270 PMID:19144319MGIPMID:19144319
Actr2Mousecilium assembly acts_upstream_of_or_withinISOUniProtKB:P611602290270 PMID:22684256MGIPMID:22684256
Actr2Mousecytosolic transport acts_upstream_of_or_withinIMP 2290270 PMID:21874009MGIPMID:21874009
Actr2Mouseestablishment or maintenance of cell polarity acts_upstream_of_or_withinIGIMGI:19213672290270 PMID:21494665MGIPMID:21494665
Actr2Mousemeiotic cell cycle acts_upstream_of_or_withinIGIMGI:19213672290270 PMID:21494665MGIPMID:21494665
Actr2Mousemeiotic chromosome movement towards spindle pole acts_upstream_of_or_withinIGIMGI:19213672290270 PMID:23439682MGIPMID:23439682
Actr2Mousemeiotic cytokinesis acts_upstream_of_or_withinIGIMGI:19213672290270 PMID:21494665MGIPMID:21494665
Actr2Mousepositive regulation of dendritic spine morphogenesis  ISORGD:13108269068941 RGDPMID:23441206|REF_RGD_ID:11530033
Actr2Mousepositive regulation of dendritic spine morphogenesis involved_inISORGD:13108262290270 GO_CentralGO_REF:0000096
Actr2Mousepositive regulation of double-strand break repair via homologous recombination involved_inISOUniProtKB:P611602290270 GO_CentralGO_REF:0000119
Actr2Mousepositive regulation of double-strand break repair via homologous recombination involved_inISSUniProtKB:P611602290270 UniProtGO_REF:0000024
Actr2Mousepositive regulation of lamellipodium assembly involved_inISOUniProtKB:P611602290270 GO_CentralGO_REF:0000119
Actr2Mousepositive regulation of lamellipodium assembly involved_inISSUniProtKB:P611602290270 UniProtGO_REF:0000024
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Cellular Component
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Original Reference(s)
Actr2Mouseactin cap located_inIDA 2290270 PMID:21494665, PMID:21874009MGIPMID:21494665|PMID:21874009
Actr2MouseArp2/3 protein complex part_ofIBAPANTHER:PTN000233596|PomBase:SPAC11H11.06|SGD:S000002187|UniProtKB:P61160|dictyBase:DDB_G02721062290270 GO_CentralGO_REF:0000033
Actr2MouseArp2/3 protein complex part_ofISOUniProtKB:P611602290270 GO_CentralGO_REF:0000119
Actr2MouseArp2/3 protein complex part_ofISSUniProtKB:P611602290270 UniProtGO_REF:0000024
Actr2Mousecell cortex is_active_inIBAPANTHER:PTN000233596|PomBase:SPAC11H11.06|MGI:19139632290270 GO_CentralGO_REF:0000033
Actr2Mousecell cortex located_inIDA 2290270 PMID:21494665MGIPMID:21494665
Actr2Mousecell projection located_inIEAUniProtKB-SubCell:SL-02802290270 UniProtGO_REF:0000044
Actr2Mousecytoplasm located_inISOUniProtKB:P611602290270 PMID:22684256GO_CentralGO_REF:0000119|PMID:22684256
Actr2Mousecytoplasm located_inISSUniProtKB:P611602290270 UniProtGO_REF:0000024
Actr2Mousecytosol located_inIEAGO:00164822290270 GOCGO_REF:0000108
Actr2Mouselamellipodium  ISORGD:13108269068941 RGDPMID:17442843|REF_RGD_ID:11567221
Actr2Mouselamellipodium located_inISORGD:13108262290270 GO_CentralGO_REF:0000096
Actr2Mousenucleus located_inISOUniProtKB:P611602290270 GO_CentralGO_REF:0000119
Actr2Mousenucleus located_inISSUniProtKB:P611602290270 UniProtGO_REF:0000024
Actr2Mousepodosome core located_inISORGD:13108262290270 GO_CentralGO_REF:0000096
Actr2Mousepodosome core  ISORGD:13108269068941 RGDPMID:23158496|REF_RGD_ID:11530035
Actr2Mousepostsynapse is_active_inISORGD:13108262290270 GO_CentralGO_REF:0000096
Actr2Mousesite of double-strand break located_inISOUniProtKB:P611602290270 GO_CentralGO_REF:0000119
Actr2Mousesite of double-strand break located_inISSUniProtKB:P611602290270 UniProtGO_REF:0000024
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Molecular Function
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Original Reference(s)
Actr2Mouseactin filament binding enablesIEAUniProtKB:P61160|ensembl:ENSP000002606412290270 EnsemblGO_REF:0000107
Actr2Mouseactin filament binding contributes_toIBAPANTHER:PTN000233596|UniProtKB:P611602290270 GO_CentralGO_REF:0000033
Actr2Mouseactin filament binding contributes_toISOUniProtKB:P611602290270 GO_CentralGO_REF:0000119
Actr2MouseATP binding enablesIEAUniProtKB-KW:KW-00672290270 UniProtGO_REF:0000043
Actr2Mousecytoskeletal protein binding enablesISORGD:13108262290270 GO_CentralGO_REF:0000096
Actr2Mousecytoskeletal protein binding  ISORGD:13108269068941Arpc1RGDPMID:18725535|REF_RGD_ID:11530065
Actr2Mouseprotein binding  ISORGD:24059068941 RGDPMID:17615370|REF_RGD_ID:8693596
Actr2Mouseprotein binding enablesIPIPR:Q9JLI72290270 PMID:31146259MGIPMID:31146259
Actr2Mousestructural constituent of cytoskeleton enablesIEAUniProtKB:P61160|ensembl:ENSP000002606412290270 EnsemblGO_REF:0000107
Actr2Mousestructural constituent of cytoskeleton enablesISOUniProtKB:P611602290270 GO_CentralGO_REF:0000119
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RGD Manual Annotations


  
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Original Reference(s)
Actr2Mouseinsulin responsive facilitative sugar transporter mediated glucose transport pathway   ISORGD:131082610054052 RGD 
Actr2MouseRab family mediated signaling pathway  ISORGD:131082610054052 RGD 

Imported Annotations - PID (archival)

Object Symbol
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Original Reference(s)
Actr2Mouseplatelet-derived growth factor signaling pathway  ISORGD:13219526484113 PIDPID:200149
Object Symbol
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Reference
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Original Reference(s)
Actr2Mouseabnormal survival  IAGP 5509061 MGIPMID:28827327

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#
Reference Title
Reference Citation
1. Arp2/3- and cofilin-coordinated actin dynamics is required for insulin-mediated GLUT4 translocation to the surface of muscle cells. Chiu TT, etal., Mol Biol Cell. 2010 Oct 15;21(20):3529-39. doi: 10.1091/mbc.E10-04-0316. Epub 2010 Aug 25.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Newly identified cytoskeletal components are associated with dynamic changes of podocyte foot processes. Miao J, etal., Nephrol Dial Transplant. 2009 Nov;24(11):3297-305. doi: 10.1093/ndt/gfp338. Epub 2009 Jul 17.
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. Involvement of Arp2/3 complex in the process of colorectal carcinogenesis. Otsubo T, etal., Mod Pathol. 2004 Apr;17(4):461-7.
8. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Paleocortex is specified in mice in which dorsal telencephalic patterning is severely disrupted. Vyas A, etal., J Comp Neurol 2003 Nov 24;466(4):545-53.
11. Relationship between learning and memory deficits and Arp2 expression in the hippocampus in rats with traumatic brain injury. Xia X, etal., World Neurosurg. 2012 Dec;78(6):689-96. doi: 10.1016/j.wneu.2011.07.042. Epub 2011 Nov 7.
12. Identification of the shared gene signatures between pulmonary fibrosis and pulmonary hypertension using bioinformatics analysis. Zhao H, etal., Front Immunol. 2023 Sep 4;14:1197752. doi: 10.3389/fimmu.2023.1197752. eCollection 2023.
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PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12589062   PMID:12904583   PMID:14610273   PMID:15085951   PMID:15233919   PMID:15247266  
PMID:15331365   PMID:15489334   PMID:15747579   PMID:16141072   PMID:16141073   PMID:17500055   PMID:17721515   PMID:17967808   PMID:18720401   PMID:18799693   PMID:19068115   PMID:19144319  
PMID:19922875   PMID:21406566   PMID:21494665   PMID:21677750   PMID:21873635   PMID:21874009   PMID:22385962   PMID:22684256   PMID:22951093   PMID:23439682   PMID:23495010   PMID:24043783  
PMID:24457600   PMID:24998208   PMID:25220164   PMID:25315346   PMID:25737280   PMID:25926623   PMID:26028144   PMID:26370502   PMID:26655834   PMID:26975831   PMID:27181356   PMID:27927957  
PMID:28378742   PMID:28827327   PMID:29111324   PMID:29518331   PMID:30068389   PMID:30457570   PMID:30550785   PMID:30562941   PMID:30833597   PMID:31146259   PMID:31157616   PMID:31577955  
PMID:31815664   PMID:31961823   PMID:32079655   PMID:32325033   PMID:32554809   PMID:32581705   PMID:32968282   PMID:33903241   PMID:34455539   PMID:35658973   PMID:36293380   PMID:37142655  



Actr2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391120,012,304 - 20,062,951 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1120,012,304 - 20,062,913 (-)EnsemblGRCm39 Ensembl
GRCm381120,062,304 - 20,112,951 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1120,062,304 - 20,112,913 (-)EnsemblGRCm38mm10GRCm38
MGSCv371119,962,307 - 20,012,954 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361119,962,307 - 20,012,915 (-)NCBIMGSCv36mm8
Celera1122,204,487 - 22,259,500 (-)NCBICelera
Cytogenetic Map11A3.1NCBI
cM Map1112.88NCBI
ACTR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38265,227,831 - 65,271,253 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl265,227,788 - 65,271,253 (+)EnsemblGRCh38hg38GRCh38
GRCh37265,454,965 - 65,498,387 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36265,308,406 - 65,351,891 (+)NCBINCBI36Build 36hg18NCBI36
Build 34265,366,552 - 65,410,036NCBI
Celera265,301,566 - 65,345,120 (+)NCBICelera
Cytogenetic Map2p14NCBI
HuRef265,189,074 - 65,232,629 (+)NCBIHuRef
CHM1_1265,386,192 - 65,429,751 (+)NCBICHM1_1
T2T-CHM13v2.0265,237,506 - 65,280,921 (+)NCBIT2T-CHM13v2.0
Actr2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81498,500,119 - 98,535,092 (-)NCBIGRCr8
mRatBN7.21494,296,443 - 94,333,735 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1494,296,443 - 94,340,524 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1498,639,283 - 98,680,250 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01499,879,572 - 99,920,537 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01496,346,941 - 96,387,904 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.014104,338,486 - 104,375,840 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14104,340,434 - 104,375,649 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014104,072,596 - 104,109,950 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414100,848,391 - 100,883,833 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.114100,867,618 - 100,903,044 (-)NCBI
Celera1493,318,648 - 93,356,930 (-)NCBICelera
Cytogenetic Map14q22NCBI
Actr2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542419,293,949 - 19,333,170 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542419,293,949 - 19,333,170 (-)NCBIChiLan1.0ChiLan1.0
ACTR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21261,131,388 - 61,179,542 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A61,135,339 - 61,180,922 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A65,289,675 - 65,333,219 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A66,412,786 - 66,456,857 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A66,413,011 - 66,456,857 (+)Ensemblpanpan1.1panPan2
ACTR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11064,696,068 - 64,733,027 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1064,696,111 - 64,730,553 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1064,582,083 - 64,619,025 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01065,705,072 - 65,742,073 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1065,705,085 - 65,742,062 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11065,383,665 - 65,420,656 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01065,691,644 - 65,728,572 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01065,986,809 - 66,023,812 (+)NCBIUU_Cfam_GSD_1.0
Actr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629218,549,870 - 18,591,068 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364919,979,427 - 10,022,043 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364919,980,228 - 10,021,417 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACTR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl376,691,280 - 76,729,252 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1376,691,275 - 76,729,269 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2380,487,347 - 80,525,297 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACTR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11441,740,432 - 41,780,045 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1441,739,968 - 41,779,964 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604570,111,314 - 70,152,221 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Actr2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247628,281,433 - 8,339,830 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247628,282,415 - 8,339,818 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Actr2
2071 total Variants

Predicted Target Of
Summary Value
Count of predictions:914
Count of miRNA genes:524
Interacting mature miRNAs:625
Transcripts:ENSMUST00000000137, ENSMUST00000132022, ENSMUST00000134779
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 50 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357722Vtbt11_mvertebral trabecular bone trait 11 (mouse)Not determined11123880487Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1301765Skull15_mskull morphology 15 (mouse)Not determined11125976374Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
13524844Ppiq9_mprepulse inhibition QTL 9 (mouse)11904999735077325Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
1300661Lmr6_mleishmaniasis resistance 6 (mouse)Not determined11125976374Mouse

1 to 10 of 50 rows
MDB0504  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381120,062,374 - 20,062,484UniSTSGRCm38
MGSCv371119,962,377 - 19,962,487UniSTSGRCm37
Celera1122,204,557 - 22,204,667UniSTS
Cytogenetic Map11A3.1UniSTS
Whitehead_YAC11 UniSTS
RH125883  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381120,062,366 - 20,062,615UniSTSGRCm38
MGSCv371119,962,369 - 19,962,618UniSTSGRCm37
Celera1122,204,549 - 22,204,798UniSTS
Cytogenetic Map11A3.1UniSTS
Whitehead/MRC_RH11381.6UniSTS
D6Ertd746e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11A3.1UniSTS
cM Map631.5UniSTS
cM Map6 UniSTS
cM Map1131.5UniSTS
RH141392  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381197,161,710 - 97,161,908UniSTSGRCm38
MGSCv371197,023,024 - 97,023,222UniSTSGRCm37
Celera1122,261,026 - 22,261,224UniSTS
Celera11106,814,630 - 106,814,828UniSTS
Cytogenetic Map11A3.1UniSTS
Cytogenetic Map11DUniSTS






1 to 16 of 16 rows
RefSeq Transcripts NM_001362899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_146243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK014618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK014859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL606522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC047530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE448820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP753259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY278998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 16 of 16 rows

Ensembl Acc Id: ENSMUST00000000137   ⟹   ENSMUSP00000000137
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1120,012,304 - 20,062,913 (-)Ensembl
GRCm38.p6 Ensembl1120,062,304 - 20,112,913 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132022
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1120,028,686 - 20,062,867 (-)Ensembl
GRCm38.p6 Ensembl1120,078,686 - 20,112,867 (-)Ensembl
Ensembl Acc Id: ENSMUST00000134779
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1120,050,587 - 20,062,909 (-)Ensembl
GRCm38.p6 Ensembl1120,100,587 - 20,112,909 (-)Ensembl
RefSeq Acc Id: NM_001362899   ⟹   NP_001349828
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391120,012,304 - 20,062,951 (-)NCBI
GRCm381120,062,304 - 20,112,951 (-)NCBI
Sequence:
RefSeq Acc Id: NM_146243   ⟹   NP_666355
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391120,012,304 - 20,062,951 (-)NCBI
GRCm381120,062,304 - 20,112,951 (-)ENTREZGENE
MGSCv371119,962,307 - 20,012,954 (-)RGD
Celera1122,204,487 - 22,259,500 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_666355   ⟸   NM_146243
- Peptide Label: isoform 2
- UniProtKB: Q6PI31 (UniProtKB/Swiss-Prot),   P61161 (UniProtKB/Swiss-Prot),   Q5SW83 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001349828   ⟸   NM_001362899
- Peptide Label: isoform 1
Ensembl Acc Id: ENSMUSP00000000137   ⟸   ENSMUST00000000137

Name Modeler Protein Id AA Range Protein Structure
AF-P61161-F1-model_v2 AlphaFold P61161 1-394 view protein structure

RGD ID:6820281
Promoter ID:MM_KWN:6558
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_146243_ACTR2,   OTTMUST00000011647,   OTTMUST00000011649,   UC007ICS.1,   UC007ICT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361120,012,426 - 20,013,227 (-)MPROMDB
RGD ID:8674046
Promoter ID:EPDNEW_M15053
Type:initiation region
Name:Actr2_1
Description:Mus musculus ARP2 actin-related protein 2 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381120,112,887 - 20,112,947EPDNEW


1 to 23 of 23 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000020152 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000000137 ENTREZGENE
  ENSMUST00000000137.8 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.420.40 UniProtKB/Swiss-Prot
  Actin, Chain A, domain 4 UniProtKB/Swiss-Prot
InterPro Actin UniProtKB/Swiss-Prot
  Actin/actin-like_CS UniProtKB/Swiss-Prot
  ATPase_NBD UniProtKB/Swiss-Prot
KEGG Report mmu:66713 UniProtKB/Swiss-Prot
MGD MGI:1913963 ENTREZGENE
NCBI Gene 66713 ENTREZGENE
PANTHER PTHR11937 UniProtKB/Swiss-Prot
Pfam Actin UniProtKB/Swiss-Prot
PhenoGen Actr2 PhenoGen
PRINTS ACTIN UniProtKB/Swiss-Prot
PROSITE ACTINS_ACT_LIKE UniProtKB/Swiss-Prot
SMART ACTIN UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53067 UniProtKB/Swiss-Prot
UniProt ARP2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q5SW83 ENTREZGENE, UniProtKB/TrEMBL
  Q6PI31 ENTREZGENE
UniProt Secondary O15142 UniProtKB/Swiss-Prot
  Q6PI31 UniProtKB/Swiss-Prot
1 to 23 of 23 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-12-19 Actr2  actin related protein 2  Actr2  ARP2 actin-related protein 2  Symbol and/or name change 5135510 APPROVED
2012-07-10 Actr2  ARP2 actin-related protein 2  Actr2  ARP2 actin-related protein 2 homolog (yeast)  Symbol and/or name change 5135510 APPROVED