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Gene: Bnipl (BCL2/adenovirus E1B 19kD interacting protein like) Mus musculus

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Symbol:

Bnipl

Name:

BCL2/adenovirus E1B 19kD interacting protein like

RGD ID:

1319840

MGI Page

MGI

Description:

Predicted to enable identical protein binding activity. Predicted to be involved in apoptotic process; negative regulation of cell population proliferation; and regulation of growth rate. Predicted to be located in cytosol and nucleus. Predicted to be active in cytoplasm. Is expressed in several structures, including embryo endoderm; genital tubercle; and urinary system. Orthologous to human BNIPL (BCL2 interacting protein like).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

1700128A13Rik; B; bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein; BN; BNI; BNIP-2 similar; BNIP-S; BNIPL1; BNIPL2; MGC8103; PP7; PP73; PP753

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	BNIPL (BCL2 interacting protein like)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Bnipl (BCL2 interacting protein like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Bnipl (BCL2 interacting protein like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	BNIPL (BCL2 interacting protein like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	BNIPL (BCL2 interacting protein like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Bnipl (BCL2 interacting protein like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	BNIPL (BCL2 interacting protein like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	BNIPL (BCL2 interacting protein like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Bnipl (BCL2 interacting protein like)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Bnipl (BCL2 interacting protein like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	BNIPL (BCL2 interacting protein like)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	bnipl (BCL2 interacting protein like)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB\|ZFIN)
Drosophila melanogaster (fruit fly):	CG11593	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	bnipl	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PhylomeDB)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	95,148,587 - 95,158,504 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	95,148,582 - 95,158,504 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	95,241,276 - 95,252,144 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	95,241,271 - 95,251,193 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	95,045,215 - 95,055,115 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	95,326,697 - 95,336,506 (-)	NCBI		MGSCv36	mm8
Celera	3	96,672,342 - 96,682,246 (-)	NCBI		Celera
Cytogenetic Map	3	F2.1	NCBI
cM Map	3	40.74	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bnipl	Mouse	gastrointestinal stromal tumor		ISO	BNIPL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:28492532
Bnipl	Mouse	immunodeficiency 42		ISO	BNIPL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency	ClinVar	PMID:28492532
Bnipl	Mouse	MHC class II deficiency		ISO	BNIPL (Homo sapiens)	8554872	ClinVar Annotator: match by term: MHC class II deficiency	ClinVar	PMID:28492532
Bnipl	Mouse	parathyroid carcinoma		ISO	BNIPL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Parathyroid carcinoma	ClinVar	PMID:28492532
Bnipl	Mouse	severe congenital neutropenia 3		ISO	BNIPL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Kostmann syndrome	ClinVar	PMID:28492532
Bnipl	Mouse	severe congenital neutropenia 5		ISO	BNIPL (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital neutropenia-myelofibrosis-nephromegaly syndrome	ClinVar	PMID:28492532

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bnipl	Mouse	1,2-dimethylhydrazine	affects expression	EXP		6480464	1 and 2-Dimethylhydrazine affects the expression of BNIPL mRNA	CTD	PMID:22206623
Bnipl	Mouse	17beta-estradiol	decreases expression	ISO	BNIPL (Homo sapiens)	6480464	Estradiol results in decreased expression of BNIPL mRNA	CTD	PMID:31614463
Bnipl	Mouse	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of BNIPL mRNA	CTD	PMID:21570461
Bnipl	Mouse	4,4'-sulfonyldiphenol	increases expression	EXP		6480464	bisphenol S results in increased expression of BNIPL mRNA	CTD	PMID:30951980
Bnipl	Mouse	aflatoxin B1	increases methylation	ISO	BNIPL (Homo sapiens)	6480464	Aflatoxin B1 results in increased methylation of BNIPL gene	CTD	PMID:27153756
Bnipl	Mouse	aristolochic acid A	increases expression	ISO	BNIPL (Homo sapiens)	6480464	aristolochic acid I results in increased expression of BNIPL mRNA	CTD	PMID:33212167
Bnipl	Mouse	arsane	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[sodium arsenate results in increased abundance of Arsenic] which results in decreased expression of BNIPL mRNA	CTD	PMID:32525701
Bnipl	Mouse	arsenic atom	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[sodium arsenate results in increased abundance of Arsenic] which results in decreased expression of BNIPL mRNA	CTD	PMID:32525701
Bnipl	Mouse	benzo[a]pyrene	decreases methylation	ISO	BNIPL (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased methylation of BNIPL 5' UTR	CTD	PMID:27901495
Bnipl	Mouse	benzo[a]pyrene	decreases expression	ISO	BNIPL (Homo sapiens)	6480464	Benzo(a)pyrene results in decreased expression of BNIPL mRNA	CTD	PMID:32234424
Bnipl	Mouse	Benzo[k]fluoranthene	decreases expression	EXP		6480464	benzo(k)fluoranthene results in decreased expression of BNIPL mRNA	CTD	PMID:26377693
Bnipl	Mouse	bisphenol A	increases expression	EXP		6480464	bisphenol A results in increased expression of BNIPL mRNA	CTD	PMID:32156529
Bnipl	Mouse	CGP 52608	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to BNIPL gene]	CTD	PMID:28238834
Bnipl	Mouse	copper(II) sulfate	decreases expression	EXP		6480464	Copper Sulfate results in decreased expression of BNIPL mRNA	CTD	PMID:18579281
Bnipl	Mouse	DDE	decreases expression	ISO	BNIPL (Homo sapiens)	6480464	Dichlorodiphenyl Dichloroethylene results in decreased expression of BNIPL mRNA	CTD	PMID:38568856
Bnipl	Mouse	dichloroacetic acid	increases expression	EXP		6480464	Dichloroacetic Acid results in increased expression of BNIPL mRNA	CTD	PMID:28962523
Bnipl	Mouse	disodium selenite	decreases expression	EXP		6480464	Sodium Selenite results in decreased expression of BNIPL mRNA	CTD	PMID:23274088
Bnipl	Mouse	dorsomorphin	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Bnipl	Mouse	furan	decreases expression	ISO	Bnipl (Rattus norvegicus)	6480464	furan results in decreased expression of BNIPL mRNA	CTD	PMID:25539665
Bnipl	Mouse	mercury dibromide	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of BNIPL mRNA	CTD	PMID:27188386
Bnipl	Mouse	panobinostat	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of BNIPL mRNA	CTD	PMID:27188386
Bnipl	Mouse	panobinostat	increases expression	ISO	BNIPL (Homo sapiens)	6480464	panobinostat results in increased expression of BNIPL mRNA	CTD	PMID:26272509
Bnipl	Mouse	paraquat	decreases expression	ISO	Bnipl (Rattus norvegicus)	6480464	Paraquat results in decreased expression of BNIPL mRNA	CTD	PMID:32680482
Bnipl	Mouse	phenylmercury acetate	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of BNIPL mRNA	CTD	PMID:27188386
Bnipl	Mouse	progesterone	decreases expression	EXP		6480464	Progesterone results in decreased expression of BNIPL mRNA	CTD	PMID:22238285
Bnipl	Mouse	SB 431542	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ...	CTD	PMID:27188386
Bnipl	Mouse	sodium arsenate	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[sodium arsenate results in increased abundance of Arsenic] which results in decreased expression of BNIPL mRNA	CTD	PMID:32525701
Bnipl	Mouse	sodium arsenite	decreases expression	EXP		6480464	sodium arsenite results in decreased expression of BNIPL mRNA	CTD	PMID:37682722
Bnipl	Mouse	thalidomide	increases expression	EXP		6480464	Thalidomide results in increased expression of BNIPL mRNA	CTD	PMID:26217789
Bnipl	Mouse	Theaflavin 3,3'-digallate	affects expression	ISO	BNIPL (Homo sapiens)	6480464	theaflavin-3 and 3'-digallate affects the expression of BNIPL mRNA	CTD	PMID:34925699
Bnipl	Mouse	trichloroethene	decreases expression	ISO	Bnipl (Rattus norvegicus)	6480464	Trichloroethylene results in decreased expression of BNIPL mRNA	CTD	PMID:33387578
Bnipl	Mouse	trichostatin A	increases expression	ISO	BNIPL (Homo sapiens)	6480464	trichostatin A results in increased expression of BNIPL mRNA	CTD	PMID:24935251 and PMID:26272509
Bnipl	Mouse	trichostatin A	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[NOG protein co-treated with trichostatin A co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of BNIPL mRNA	CTD	PMID:27188386
Bnipl	Mouse	triphenyl phosphate	affects expression	ISO	BNIPL (Homo sapiens)	6480464	triphenyl phosphate affects the expression of BNIPL mRNA	CTD	PMID:37042841
Bnipl	Mouse	valproic acid	decreases methylation	ISO	BNIPL (Homo sapiens)	6480464	Valproic Acid results in decreased methylation of BNIPL gene	CTD	PMID:29154799
Bnipl	Mouse	valproic acid	affects expression	ISO	BNIPL (Homo sapiens)	6480464	Valproic Acid affects the expression of BNIPL mRNA	CTD	PMID:25979313
Bnipl	Mouse	valproic acid	increases expression	ISO	BNIPL (Homo sapiens)	6480464	Valproic Acid results in increased expression of BNIPL mRNA	CTD	PMID:23179753 more ...
Bnipl	Mouse	valproic acid	multiple interactions	ISO	BNIPL (Homo sapiens)	6480464	[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of BNIPL mRNA	CTD	PMID:27188386

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bnipl	Mouse	apoptotic process	involved_in	ISO	UniProtKB:Q7Z465	2290270		GO_Central	GO_REF:0000119
Bnipl	Mouse	apoptotic process	acts_upstream_of_or_within	ISO	UniProtKB:Q7Z465	2290270		MGI	GO_REF:0000008
Bnipl	Mouse	apoptotic process	involved_in	IBA	PANTHER:PTN000251507 and UniProtKB:Q7Z465	2290270		GO_Central	GO_REF:0000033
Bnipl	Mouse	negative regulation of cell population proliferation	involved_in	ISO	UniProtKB:Q7Z465	2290270		GO_Central	GO_REF:0000119
Bnipl	Mouse	regulation of growth rate	involved_in	ISO	UniProtKB:Q7Z465	2290270		GO_Central	GO_REF:0000119

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bnipl	Mouse	cytoplasm	is_active_in	IBA	PANTHER:PTN001087311 more ...	2290270		GO_Central	GO_REF:0000033
Bnipl	Mouse	cytosol	located_in	ISO	UniProtKB:Q7Z465	2290270		GO_Central	GO_REF:0000119
Bnipl	Mouse	nucleus	located_in	ISO	UniProtKB:Q7Z465	2290270		GO_Central	GO_REF:0000119

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Bnipl	Mouse	identical protein binding	enables	ISO	UniProtKB:Q7Z465	2290270		GO_Central	GO_REF:0000119
Bnipl	Mouse	protein binding	enables	ISO	UniProtKB:P14174 and UniProtKB:P55789	9068941	PMID:12681488	UniProt	PMID:12681488
Bnipl	Mouse	protein binding	enables	ISO	UniProtKB:P10415 and UniProtKB:Q07960	9068941	PMID:12901880	UniProt	PMID:12901880

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	MGDs mouse GO annotations	MGD data from the GO Consortium
3.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:15489334	PMID:16141072	PMID:16141073	PMID:17328885	PMID:17934213	PMID:21267068	PMID:21873635	PMID:27173853

Bnipl
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	95,148,587 - 95,158,504 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	95,148,582 - 95,158,504 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	95,241,276 - 95,252,144 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	95,241,271 - 95,251,193 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	95,045,215 - 95,055,115 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	95,326,697 - 95,336,506 (-)	NCBI		MGSCv36	mm8
Celera	3	96,672,342 - 96,682,246 (-)	NCBI		Celera
Cytogenetic Map	3	F2.1	NCBI
cM Map	3	40.74	NCBI

BNIPL
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	151,036,586 - 151,047,720 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	151,036,321 - 151,047,720 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	151,009,062 - 151,020,196 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	149,275,658 - 149,286,699 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	147,824,388 - 147,832,236	NCBI
Celera	1	124,118,004 - 124,135,383 (+)	NCBI		Celera
Cytogenetic Map	1	q21.3	NCBI
HuRef	1	122,386,219 - 122,397,486 (+)	NCBI		HuRef
CHM1_1	1	152,404,339 - 152,415,398 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	150,160,275 - 150,171,400 (+)	NCBI		T2T-CHM13v2.0

Bnipl
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	185,507,591 - 185,519,415 (-)	NCBI		GRCr8
mRatBN7.2	2	182,818,593 - 182,830,421 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	182,818,595 - 182,828,588 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	190,483,916 - 190,493,914 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	188,279,503 - 188,289,495 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	183,116,410 - 183,126,404 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	196,415,736 - 196,425,727 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	196,415,738 - 196,425,727 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	215,912,567 - 215,922,558 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	190,151,907 - 190,161,898 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	190,115,201 - 190,124,611 (-)	NCBI
Celera	2	175,352,238 - 175,362,229 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Bnipl
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955588	409,511 - 417,825 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955588	409,509 - 417,825 (+)	NCBI	ChiLan1.0	ChiLan1.0

BNIPL
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	98,786,863 - 98,795,818 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	98,541,062 - 98,550,014 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	126,385,651 - 126,396,697 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	130,033,811 - 130,044,368 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

BNIPL
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	60,126,341 - 60,135,209 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	60,126,745 - 60,134,605 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	59,569,962 - 59,578,804 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	61,142,192 - 61,151,045 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	61,142,572 - 61,150,446 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	59,971,270 - 59,980,109 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	60,056,161 - 60,065,005 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	60,783,690 - 60,792,552 (+)	NCBI		UU_Cfam_GSD_1.0

Bnipl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	22,224,034 - 22,234,543 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	1,254,822 - 1,265,031 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	1,254,525 - 1,264,380 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BNIPL
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	98,183,540 - 98,193,242 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	98,184,038 - 98,193,522 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	107,436,541 - 107,446,531 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BNIPL
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666038	12,230,065 - 12,241,325 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Bnipl
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	18,780,652 - 18,790,128 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624772	18,780,646 - 18,790,781 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Bnipl
474 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	819
Count of miRNA genes:	385
Interacting mature miRNAs:	448
Transcripts:	ENSMUST00000098871, ENSMUST00000107195, ENSMUST00000125515, ENSMUST00000137250, ENSMUST00000176070
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142399	Aec1_m	autoimmune exocrinopathy 1 (mouse)			Not determined			7586174	102690034	Mouse
26884378	Skwq6_m	skull length QTL 6, 10 week (mouse)					3	51907421	102307316	Mouse
1301971	Cia5_m	collagen induced arthritis QTL 5 (mouse)			Not determined		3	66046658	100046795	Mouse
1301392	Eae3_m	susceptibility to experimental allergic encephalomyelitis 3 (mouse)			Not determined		3	79548730	113548837	Mouse
1301904	Iba2_m	induction of brown adipocytes 2 (mouse)			Not determined		3	82147043	116147184	Mouse
26884382	Bzwq1_m	bi-zygomatic width QTL 1, 5 week (mouse)					3	52207421	137205761	Mouse
11041900	Lmr11a_m	leishmaniasis resistance 11a (mouse)					3	83463991	117464137	Mouse
1301398	Rapop3_m	radiation-induced apoptosis 3 (mouse)			Not determined		3	90511217	100464137	Mouse
26884380	Skwq1_m	skull length QTL 1, 5 week (mouse)					3	43954435	101607316	Mouse
14746984	Manh54_m	mandible shape 54 (mouse)					3	85289152	119289152	Mouse
12738440	Twq3_m	testis weight QTL 3 (mouse)					3	87228015	121228015	Mouse
25314313	Syncl1_m	synaptonemal complex length 1 (mouse)					3	67907333	128393649	Mouse
1301272	Cfsw1_m	cystic fibrosis survival to weaning 1 (mouse)			Not determined		3	83882912	117883044	Mouse
1301791	Char4_m	P. chabaudi malaria resistance QTL 4 (mouse)			Not determined		3	69625509	100655290	Mouse
11049572	Lmr11c_m	leishmaniasis resistance 11c (mouse)					3	72139967	106140094	Mouse
26884436	Zlq3_m	zygomatic length QTL 3, 10 week (mouse)					3	3265060	142405761	Mouse
26884427	Cvht4_m	cranial vault height 4, 10 week (mouse)					3	16054164	109707316	Mouse
4141294	Bmd24_m	bone mineral density 24 (mouse)			Not determined		3	61740061	95740241	Mouse
10766455	Sle22_m	systematic lupus erythematosus susceptibility 22 (mouse)					3	90376936	124377072	Mouse
14747001	Mancz4_m	mandible centroid size 4 (mouse)					3	90378017	124378017	Mouse
1301705	Sles3_m	systemic lupus erythmatosus suppressor 3 (mouse)			Not determined		3	37174862	143353183	Mouse
13207570	Tcq12_m	total cholesterol QTL 12 (mouse)					3	16504164	130163649	Mouse
1357583	Sle18_m	systematic lupus erythematosus susceptibility 18 (mouse)			Not determined		3	87208904	125316236	Mouse
26884422	Cvht7_m	cranial vault height 7, 16 week (mouse)					3	28954149	118893649	Mouse
4142178	Ctrq2_m	C. trachomatis resistance QTL 2 (mouse)			Not determined		3	89139967	137453008	Mouse
1300595	Tmevd2_m	Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse)			Not determined		3	75463302	109463549	Mouse
11251721	Ewc3_m	ethanol withdrawal and consumption 3 (mouse)					3	69568554	103568554	Mouse
1300982	Lmr11_m	leishmaniasis resistance 11 (mouse)			Not determined		3	72139967	106140094	Mouse
1301947	Pcfm3_m	periosteal circumference and femur length 3 (mouse)			Not determined		3	81084652	115084797	Mouse
4142099	Cq3_m	cholesterol QTL 3 (mouse)			Not determined		3	84888918	118889067	Mouse
11039512	Ltpr3b_m	Leishmania tropica response 3b (mouse)					3	83463991	117464137	Mouse
1301349	Pgia26_m	proteoglycan induced arthritis 26 (mouse)			Not determined		3	92251533	126251650	Mouse
11039519	Ltpr3_m	Leishmania tropica response 3 (mouse)					3	56704102	100464137	Mouse
1302052	Etohcta4_m	ethanol conditioned taste aversion 4 (mouse)			Not determined		3	91000105	125008748	Mouse
1302056	Orgwq4_m	organ weight QTL 4 (mouse)			Not determined		3	30067588	147304689	Mouse
11039507	Ltpr3g_m	Leishmania tropica response 3g (mouse)					3	83463991	117464137	Mouse
11039508	Ltpr3f_m	Leishmania tropica response 3f (mouse)					3	83463991	117464137	Mouse
1301422	Sle11_m	systematic lupus erythematosus susceptibility 11 (mouse)			Not determined		3	70208904	104209042	Mouse
11039509	Ltpr3e_m	Leishmania tropica response 3e (mouse)					3	83463991	117464137	Mouse
11039510	Ltpr3d_m	Leishmania tropica response 3d (mouse)					3	83463991	117464137	Mouse
13208566	Bmiq5_m	body mass index QTL 5 (mouse)					3	40954435	115793649	Mouse
11039511	Ltpr3c_m	Leishmania tropica response 3c (mouse)					3	83463991	117464137	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NM_001168356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_134253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030252448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC140190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK142472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC005659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC006585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466620	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000098871 ⟹ ENSMUSP00000096468

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	95,148,606 - 95,158,360 (-)	Ensembl
GRCm38.p6 Ensembl	3	95,241,295 - 95,251,049 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000107195 ⟹ ENSMUSP00000102813

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	95,148,582 - 95,158,504 (-)	Ensembl
GRCm38.p6 Ensembl	3	95,241,271 - 95,251,193 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000125515 ⟹ ENSMUSP00000120545

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	95,150,371 - 95,158,459 (-)	Ensembl
GRCm38.p6 Ensembl	3	95,243,060 - 95,251,148 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000137250 ⟹ ENSMUSP00000115197

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	95,149,136 - 95,158,447 (-)	Ensembl
GRCm38.p6 Ensembl	3	95,241,825 - 95,251,136 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000176070

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	3	95,152,526 - 95,155,890 (-)	Ensembl
GRCm38.p6 Ensembl	3	95,245,215 - 95,248,579 (-)	Ensembl

RefSeq Acc Id:

NM_001168356 ⟹ NP_001161828

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	95,148,604 - 95,158,504 (-)	NCBI
GRCm38	3	95,241,293 - 95,251,193 (-)	ENTREZGENE
MGSCv37	3	95,045,215 - 95,055,115 (-)	RGD
Celera	3	96,672,342 - 96,682,246 (-)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

GCAAACCTGCTCCTTGGGAGGGGAGGTGGCAAAACCTGTTTGAAGATGAGGTTACCTCCCTTCCACACCTCCTGCCTCCTTAGAGCAAAAGCAGCAGCTGACACAGGAAAGTAAAGAGTTTGGGGGCT
GGGGCCACAGCCTCCTATCCTCCTCAAGTCCCACAGGACACAGGACGACCTGGGAAGATGGGGACCAGGCAAGAAACAGGAAGAGAGACGTTAGAAGGAGGATTGCTTCCTGAGGAACCTGGCTCACC
TGGAGACCCTGAAGACCCTCAGAGAGGCTCACAGGCAGGCACCCCCAGCAGTCTGGCCTTGTGTGGCCAGCGCCCTATGCGGAAGCGTCTTTCCGCCCCAGAATGGCAGCTGAGTCTGACTGAGGGAA
CAGGAGAAAACGGAGCCTCTCCCACCCGCTCTGCGTCTTCCTCTTCTGCTGGCAGCTTGGACCTGGAGGTGGATGAGTTGGAGACACCATCAGACTCTGAGCAGCTGGACAGCGGACATGAGTTTGAA
TGGGAAGATGACTTGCCCCGGGCAGAGGGCCTGGGGGCCAGTGAGGCAGCAGAAAGACTGGGCCGGGGATGCGTGTGCGATGTGGCTGGAGAAGACGGTCATCGCTGGAGAGTGTTTCGAACAGGACA
ACGAGAGCAGCGAGTGGACATGACCATCATTGAGCCCTATAAGAAAGTCTTATCTCATGGAGGTTACCATGGTGATGGCCTCAATGCTGTCATCCTCTTTGCTTCCTGCTATCTACCCCGAAGCAGCA
TCCCCAACTACACCTACATCATGGAACACTTATTCAGGCTTCGGAAAAACCTTCGCGCCCTGGTGGTCGTCCACGCTACGTGGTATGTGAAGGCCTTCCTGGCACTGGTTCGGCCCTTCATCAGCTCC
AAGTTCACACGAAAGATCCGCTTTCTGGACAGCCTCGGAGAGCTGGCCCAGCTCATCTCGCTAGAGCAAGTGCACATACCGGAAGTTGTCAGACAGCTGGACCGGGATCTGCATGGCTCGAAAGGCAC
CTAACACAAAGCTGGGCAGAGGGCCTAGGATCTGGCAAAGATCATGAGTGGTCTGCATGGGGGAGCTATGTCTCATCTCATCCTGAGGGCCAGCTCCACCGGATCCTCACTTTTCAGTGCGACGCCCA
CTTCTGGACACTGCCTTCAAGCTGGGATTTAAGGGTGGGAACCCCAGAACGGGGTGGGGGGTGGCTTGCATTTCGGCTGTCCAAAAAGAAGGCTGTGTGGCATTGGAAGTGTAAGGCTCTGAGTTTTA
ATTCTGCTTTAGCTGTAAAATATGTGGGTCTCATTTTCCTTCTCTGTAATCAAAACTACTGGGATCCTTCCCAGTTTAGTTGTCTTAGCAGTCTTTGAGGGGAGGTGGATGGAAGGCTTAACCAGCAG
CCACAGCCAGCCTGTCTGCCGGGAGCCCAGGAGCCAGCTTGCAAAATCTTGAAAAGCCAACCCCTTCTTAGTAGTCAGCTGCCTGTGATCCTGAGAACTGCTGTCAAAACCTGTGTTTTCACTCTCAG
TAAATTCAGACCTGTGACCTTTAA

hide sequence

RefSeq Acc Id:

NM_134253 ⟹ NP_599014

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	95,148,604 - 95,158,504 (-)	NCBI
GRCm38	3	95,241,293 - 95,251,193 (-)	ENTREZGENE
MGSCv37	3	95,045,215 - 95,055,115 (-)	RGD
Celera	3	96,672,342 - 96,682,246 (-)	RGD
cM Map	3		ENTREZGENE

Sequence:

show sequence

GCAAACCTGCTCCTTGGGAGGGGAGGTGGCAAAACCTGTTTGAAGATGAGGTTACCTCCCTTCC
ACACCTCCTGCCTCCTTAGAGCAAAAGCAGCAGCTGACACAGGAAAGTAAAGAGTTTGGGGGCTGGGGCCACAGCCTCCTATCCTCCTCAAGTCCCACAGGACACAGGACGACCTGGGAAGATGGGGA
CCAGGCAAGAAACAGGAAGAGAGACGTTAGAAGGAGGGGCTAAGGAGAAGGCAGGAGCCTCAGAACCAGGAGCAACCATGAAACTTGGAGAGCTGGAGCTAAGAGAGGAGTGGCAAGATGAAGAGTTT
CCTAGATTGCTTCCTGAGGAACCTGGCTCACCTGGAGACCCTGAAGACCCTCAGAGAGGCTCACAGGCAGGCACCCCCAGCAGTCTGGCCTTGTGTGGCCAGCGCCCTATGCGGAAGCGTCTTTCCGC
CCCAGAATGGCAGCTGAGTCTGACTGAGGGAACAGGAGAAAACGGAGCCTCTCCCACCCGCTCTGCGTCTTCCTCTTCTGCTGGCAGCTTGGACCTGGAGGTGGATGAGTTGGAGACACCATCAGACT
CTGAGCAGCTGGACAGCGGACATGAGTTTGAATGGGAAGATGACTTGCCCCGGGCAGAGGGCCTGGGGGCCAGTGAGGCAGCAGAAAGACTGGGCCGGGGATGCGTGTGCGATGTGGCTGGAGAAGAC
GGTCATCGCTGGAGAGTGTTTCGAACAGGACAACGAGAGCAGCGAGTGGACATGACCATCATTGAGCCCTATAAGAAAGTCTTATCTCATGGAGGTTACCATGGTGATGGCCTCAATGCTGTCATCCT
CTTTGCTTCCTGCTATCTACCCCGAAGCAGCATCCCCAACTACACCTACATCATGGAACACTTATTCAGGTATATGGTGGGAACTTTGGAGCTGCTGGTAGCTGAAAACTATCTGCTTGTTCACTTGA
GTGGAGGCACCAGCAGGGCCCAAGTGCCCCCTCTGAGCTGGATCCGGCAGTGTTACCGTACCTTGGACAGGAGGCTTCGGAAAAACCTTCGCGCCCTGGTGGTCGTCCACGCTACGTGGTATGTGAAG
GCCTTCCTGGCACTGGTTCGGCCCTTCATCAGCTCCAAGTTCACACGAAAGATCCGCTTTCTGGACAGCCTCGGAGAGCTGGCCCAGCTCATCTCGCTAGAGCAAGTGCACATACCGGAAGTTGTCAG
ACAGCTGGACCGGGATCTGCATGGCTCGAAAGGCACCTAACACAAAGCTGGGCAGAGGGCCTAGGATCTGGCAAAGATCATGAGTGGTCTGCATGGGGGAGCTATGTCTCATCTCATCCTGAGGGCCA
GCTCCACCGGATCCTCACTTTTCAGTGCGACGCCCACTTCTGGACACTGCCTTCAAGCTGGGATTTAAGGGTGGGAACCCCAGAACGGGGTGGGGGGTGGCTTGCATTTCGGCTGTCCAAAAAGAAGG
CTGTGTGGCATTGGAAGTGTAAGGCTCTGAGTTTTAATTCTGCTTTAGCTGTAAAATATGTGGGTCTCATTTTCCTTCTCTGTAATCAAAACTACTGGGATCCTTCCCAGTTTAGTTGTCTTAGCAGT
CTTTGAGGGGAGGTGGATGGAAGGCTTAACCAGCAGCCACAGCCAGCCTGTCTGCCGGGAGCCCAGGAGCCAGCTTGCAAAATCTTGAAAAGCCAACCCCTTCTTAGTAGTCAGCTGCCTGTGATCCT
GAGAACTGCTGTCAAAACCTGTGTTTTCACTCTCAGTAAATTCAGACCTGTGACCTTTAA

hide sequence

RefSeq Acc Id:

XM_030252448 ⟹ XP_030108308

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	3	95,148,587 - 95,158,454 (-)	NCBI
GRCm38	3	95,241,276 - 95,252,136 (-)	NCBI

Sequence:

show sequence

GTTACCTCCCTTCCACACCTCCTGCCTCCTTAGAGCAAAAGCAGCAGCTGACACAGGAAAGTAA
AGAGTTTGGGGGCTGGGGCCACAGCCTCCTATCCTCCTCAAGTCCCACAGGACACAGGACGACCTGGGAAGATGGGGACCAGGCAAGAAACAGGAAGAGAGACGTTAGAAGGAGGATTGCTTCCTGAG
GAACCTGGCTCACCTGGAGACCCTGAAGACCCTCAGAGAGGCTCACAGGCAGGCACCCCCAGCAGTCTGGCCTTGTGTGGCCAGCGCCCTATGCGGAAGCGTCTTTCCGCCCCAGAATGGCAGCTGAG
TCTGACTGAGGGAACAGGAGAAAACGGAGCCTCTCCCACCCGCTCTGCGTCTTCCTCTTCTGCTGGCAGCTTGGACCTGGAGGTGGATGAGTTGGAGACACCATCAGACTCTGAGCAGCTGGACAGCG
GACATGAGTTTGAATGGGAAGATGACTTGCCCCGGGCAGAGGGCCTGGGGGCCAGTGAGGCAGCAGAAAGACTGGGCCGGGGATGCGTGTGCGATGTGGCTGGAGAAGACGGTCATCGCTGGAGAGTG
TTTCGAACAGGACAACGAGAGCAGCGAGTGGACATGACCATCATTGAGCCCTATAAGAAAGTCTTATCTCATGGAGGTTACCATGGTGATGGCCTCAATGCTGTCATCCTCTTTGCTTCCTGCTATCT
ACCCCGAAGCAGCATCCCCAACTACACCTACATCATGGAACACTTATTCAGGTATATGGTGGGAACTTTGGAGCTGCTGGTAGCTGAAAACTATCTGCTTGTTCACTTGAGTGGAGGCACCAGCAGGG
CCCAAGTGCCCCCTCTGAGCTGGATCCGGCAGTGTTACCGTACCTTGGACAGGAGGCTTCGGAAAAACCTTCGCGCCCTGGTGGTCGTCCACGCTACGTGGTATGTGAAGGCCTTCCTGGCACTGGTT
CGGCCCTTCATCAGCTCCAAGTTCACACGAAAGATCCGCTTTCTGGACAGCCTCGGAGAGCTGGCCCAGCTCATCTCGCTAGAGCAAGTGCACATACCGGAAGTTGTCAGACAGCTGGACCGGGATCT
GCATGGCTCGAAAGGCACCTAACACAAAGCTGGGCAGAGGGCCTAGGATCTGGCAAAGATCATGAGTGGTCTGCATGGGGGAGCTATGTCTCATCTCATCCTGAGGGCCAGCTCCACCGGATCCTCAC
TTTTCAGTGCGACGCCCACTTCTGGACACTGCCTTCAAGCTGGGATTTAAGGGTGGGAACCCCAGAACGGGGTGGGGGGTGGCTTGCATTTCGGCTGTCCAAAAAGAAGGCTGTGTGGCATTGGAAGT
GTAAGGCTCTGAGTTTTAATTCTGCTTTAGCTGTAAAATATGTGGGTCTCATTTTCCTTCTCTGTAATCAAAACTACTGGGATCCTTCCCAGTTTAGTTGTCTTAGCAGTCTTTGAGGGGAGGTGGAT
GGAAGGCTTAACCAGCAGCCACAGCCAGCCTGTCTGCCGGGAGCCCAGGAGCCAGCTTGCAAAATCTTGAAAAGCCAACCCCTTCTTAGTAGTCAGCTGCCTGTGATCCTGAGAACTGCTGTCAAAAC
CTGTGTTTTCACTCTCAGTAAATTCAGACCTGTGACCTTTAATAAACTGTGATGAGAGA

hide sequence


Protein RefSeqs	NP_001161828	(Get FASTA)	NCBI Sequence Viewer
	NP_599014	(Get FASTA)	NCBI Sequence Viewer
	XP_030108308	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH05659	(Get FASTA)	NCBI Sequence Viewer
	AAH06585	(Get FASTA)	NCBI Sequence Viewer
	BAE25078	(Get FASTA)	NCBI Sequence Viewer
	EDL38791	(Get FASTA)	NCBI Sequence Viewer
	EDL38792	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000096468
	ENSMUSP00000102813
	ENSMUSP00000115197.3
GenBank Protein	Q99JU7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_599014 ⟸ NM_134253
- Peptide Label:	isoform 1
- UniProtKB:	Q99JU7 (UniProtKB/Swiss-Prot), Q923E3 (UniProtKB/Swiss-Prot), E9QME1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGTRQETGRETLEGGAKEKAGASEPGATMKLGELELREEWQDEEFPRLLPEEPGSPGDPEDPQRGSQAGTPSSLALCGQRPMRKRLSAPEWQLSLTEGTGENGASPTRSASSSSAGSLDLEVDELETP SDSEQLDSGHEFEWEDDLPRAEGLGASEAAERLGRGCVCDVAGEDGHRWRVFRTGQREQRVDMTIIEPYKKVLSHGGYHGDGLNAVILFASCYLPRSSIPNYTYIMEHLFRYMVGTLELLVAENYLLV HLSGGTSRAQVPPLSWIRQCYRTLDRRLRKNLRALVVVHATWYVKAFLALVRPFISSKFTRKIRFLDSLGELAQLISLEQVHIPEVVRQLDRDLHGSKGT hide sequence

RefSeq Acc Id:	NP_001161828 ⟸ NM_001168356
- Peptide Label:	isoform 2
- UniProtKB:	E9Q8I3 (UniProtKB/TrEMBL), Q3UQG4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGTRQETGRETLEGGLLPEEPGSPGDPEDPQRGSQAGTPSSLALCGQRPMRKRLSAPEWQLSLTEGTGENGASPTRSASSSSAGSLDLEVDELETPSDSEQLDSGHEFEWEDDLPRAEGLGASEAAER LGRGCVCDVAGEDGHRWRVFRTGQREQRVDMTIIEPYKKVLSHGGYHGDGLNAVILFASCYLPRSSIPNYTYIMEHLFRLRKNLRALVVVHATWYVKAFLALVRPFISSKFTRKIRFLDSLGELAQLI SLEQVHIPEVVRQLDRDLHGSKGT hide sequence

RefSeq Acc Id:	XP_030108308 ⟸ XM_030252448
- Peptide Label:	isoform X1
- UniProtKB:	Q99JU7 (UniProtKB/Swiss-Prot), Q923E3 (UniProtKB/Swiss-Prot)

Ensembl Acc Id:

ENSMUSP00000120545 ⟸ ENSMUST00000125515

Ensembl Acc Id:

ENSMUSP00000096468 ⟸ ENSMUST00000098871

Protein Domains

CRAL-TRIO

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q99JU7-F1-model_v2	AlphaFold	Q99JU7	1-328	view protein structure

RGD ID:

6833509

Promoter ID:

MM_KWN:35277

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day3

Transcripts:

ENSMUST00000107195, OTTMUST00000053360, OTTMUST00000053361, OTTMUST00000053362

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	3	95,054,736 - 95,055,236 (-)	MPROMDB

RGD ID:

6881566

Promoter ID:

EPDNEW_M4234

Type:

initiation region

Name:

Bnipl_1

Description:

Mus musculus BCL2/adenovirus E1B 19kD interacting protein like, transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	3	95,251,112 - 95,251,172	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000028115	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000098871	ENTREZGENE
	ENSMUST00000107195	ENTREZGENE
	ENSMUST00000137250.9	UniProtKB/Swiss-Prot
Gene3D-CATH	3.40.525.10	UniProtKB/Swiss-Prot
InterPro	Bcl2-/adenovirus-E1B	UniProtKB/Swiss-Prot
	CRAL-TRIO_dom	UniProtKB/Swiss-Prot
	CRAL-TRIO_dom_sf	UniProtKB/Swiss-Prot
MGD	MGI:2384749	ENTREZGENE
NCBI Gene	Bnipl	ENTREZGENE
PANTHER	BCL-2/ADENOVIRUS E1B 19 KDA-INTERACTING PROTEIN 2-LIKE PROTEIN	UniProtKB/Swiss-Prot
	BNIP - RELATED	UniProtKB/Swiss-Prot
Pfam	BNIP2	UniProtKB/Swiss-Prot
	CRAL_TRIO_2	UniProtKB/Swiss-Prot
PhenoGen	Bnipl	PhenoGen
PROSITE	CRAL_TRIO	UniProtKB/Swiss-Prot
SMART	SEC14	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF52087	UniProtKB/Swiss-Prot
UniProt	BNIPL_MOUSE	UniProtKB/Swiss-Prot
	D3YY90_MOUSE	UniProtKB/TrEMBL
	E9Q8I3	ENTREZGENE, UniProtKB/TrEMBL
	E9QME1	ENTREZGENE, UniProtKB/TrEMBL
	Q3UQG4	ENTREZGENE, UniProtKB/TrEMBL
	Q923E3	ENTREZGENE
	Q99JU7	ENTREZGENE
UniProt Secondary	Q923E3	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2024-08-26	Bnipl	BCL2/adenovirus E1B 19kD interacting protein like	Bnip-s-pending	BNIP-2 similar	Symbol and/or name updated	27372883	PROVISIONAL
2024-08-21	Bnip-s-pending	BNIP-2 similar	Bnipl	BCL2/adenovirus E1B 19kD interacting protein like	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar