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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | TOE1 | Human | pontocerebellar hypoplasia | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:28092684 | |
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Imported Disease Annotations - CTDObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | TOE1 | Human | pontocerebellar hypoplasia | | EXP | | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:28092684 | |
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# | Reference Title | Reference Citation |
1. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
2. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:7829101 | PMID:12477932 | PMID:12562764 | PMID:14702039 | PMID:15146077 | PMID:15489334 | PMID:16169070 | PMID:16344560 | PMID:16710414 | PMID:17081983 | PMID:17178830 | PMID:19274049 |
PMID:19508870 | PMID:21081503 | PMID:21145461 | PMID:21642987 | PMID:21873635 | PMID:22174317 | PMID:22365833 | PMID:22939629 | PMID:23151878 | PMID:23891004 | PMID:24550385 | PMID:26056259 |
PMID:26186194 | PMID:26344197 | PMID:26496610 | PMID:27634302 | PMID:28092684 | PMID:28514442 | PMID:28515276 | PMID:28561026 | PMID:28695742 | PMID:29467282 | PMID:29509190 | PMID:29669292 |
PMID:29802200 | PMID:29884807 | PMID:29955894 | PMID:30196744 | PMID:30371886 | PMID:30463901 | PMID:30948266 | PMID:31048545 | PMID:31076518 | PMID:31091453 | PMID:31527615 | PMID:31586073 |
PMID:31871319 | PMID:32572027 | PMID:32707033 | PMID:32807901 | PMID:32814053 | PMID:32994395 | PMID:33742100 | PMID:33863777 | PMID:33961781 | PMID:34186245 | PMID:34373451 | PMID:35013218 |
PMID:35013556 | PMID:35256949 | PMID:35271311 | PMID:35850772 | PMID:35944360 | PMID:36215168 | PMID:36244648 | PMID:36273042 | PMID:36424410 | PMID:36526897 | PMID:36537216 | PMID:36574265 |
PMID:36738896 | PMID:36774506 | PMID:37001908 | PMID:37267103 | PMID:37314180 | PMID:37478862 | PMID:37635087 | PMID:37689310 | PMID:37827155 | PMID:38113892 | PMID:38496616 | PMID:38697112 |
TOE1 (Homo sapiens - human) |
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Toe1 (Mus musculus - house mouse) |
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Toe1 (Rattus norvegicus - Norway rat) |
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Toe1 (Chinchilla lanigera - long-tailed chinchilla) |
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TOE1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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TOE1 (Canis lupus familiaris - dog) |
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Toe1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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TOE1 (Sus scrofa - pig) |
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TOE1 (Chlorocebus sabaeus - green monkey) |
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Toe1 (Heterocephalus glaber - naked mole-rat) |
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Variants in TOE1
281 total Variants ![]() |
Name | Type | Condition(s) | Position(s) | Clinical significance |
GRCh38/hg38 1p34.3-33(chr1:39479787-47688131)x3 | copy number gain | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051817]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051817]|See cases [RCV000051817] | Chr1:39479787..47688131 [GRCh38] Chr1:39945459..48153803 [GRCh37] Chr1:39718046..47926390 [NCBI36] Chr1:1p34.3-33 |
pathogenic |
GRCh38/hg38 1p34.3-34.1(chr1:38222737-45636176)x3 | copy number gain | See cases [RCV000051803] | Chr1:38222737..45636176 [GRCh38] Chr1:38688409..46101848 [GRCh37] Chr1:38460996..45874435 [NCBI36] Chr1:1p34.3-34.1 |
pathogenic |
NM_025077.3(TOE1):c.551G>A (p.Arg184His) | single nucleotide variant | Malignant melanoma [RCV000064793] | Chr1:45342442 [GRCh38] Chr1:45808114 [GRCh37] Chr1:45580701 [NCBI36] Chr1:1p34.1 |
not provided |
NM_025077.4(TOE1):c.-45G>A | single nucleotide variant | Carcinoma of colon [RCV001353844]|Familial adenomatous polyposis 2 [RCV001097390]|Hereditary cancer-predisposing syndrome [RCV000579941]|Pontocerebellar hypoplasia type 7 [RCV003103733]|not provided [RCV001573000]|not specified [RCV000126892] | Chr1:45340208 [GRCh38] Chr1:45805880 [GRCh37] Chr1:1p34.1 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001128425.2(MUTYH):c.36+20C>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000410676]|Hereditary cancer-predisposing syndrome [RCV000580449]|not specified [RCV000419816] | Chr1:45340199 [GRCh38] Chr1:45805871 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.10C>G (p.Leu4Val) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV000131438] | Chr1:45340245 [GRCh38] Chr1:45805917 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.17C>A (p.Ser6Tyr) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000458224]|Familial adenomatous polyposis 2 [RCV002483273]|Hereditary cancer-predisposing syndrome [RCV000132425]|MUTYH-related disorder [RCV004739462]|not provided [RCV000656906]|not specified [RCV000212695] | Chr1:45340238 [GRCh38] Chr1:45805910 [GRCh37] Chr1:1p34.1 |
conflicting interpretations of pathogenicity|uncertain significance |
GRCh38/hg38 1p34.1(chr1:44962358-45585262)x3 | copy number gain | See cases [RCV000134906] | Chr1:44962358..45585262 [GRCh38] Chr1:45428030..46050934 [GRCh37] Chr1:45200617..45823521 [NCBI36] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+20C>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000412343]|Hereditary cancer-predisposing syndrome [RCV000776104]|not provided [RCV000160750] | Chr1:45340199 [GRCh38] Chr1:45805871 [GRCh37] Chr1:1p34.1 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001128425.2(MUTYH):c.13G>C (p.Val5Leu) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001850298]|Hereditary cancer-predisposing syndrome [RCV000164470] | Chr1:45340242 [GRCh38] Chr1:45805914 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.15C>A (p.Val5=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000543594] | Chr1:45340240 [GRCh38] Chr1:45805912 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+10A>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000545977]|Hereditary cancer-predisposing syndrome [RCV000583042]|not specified [RCV003323599] | Chr1:45340209 [GRCh38] Chr1:45805881 [GRCh37] Chr1:1p34.1 |
likely benign|uncertain significance |
NM_001128425.2(MUTYH):c.7C>G (p.Pro3Ala) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV000217552] | Chr1:45340248 [GRCh38] Chr1:45805920 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1141G>A (p.Glu381Lys) | single nucleotide variant | not provided [RCV000514282]|not specified [RCV001821436] | Chr1:45343310 [GRCh38] Chr1:45808982 [GRCh37] Chr1:1p34.1 |
benign|likely benign |
NM_001128425.2(MUTYH):c.-4G>A | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV000217729]|not provided [RCV001705215]|not specified [RCV000236456] | Chr1:45340258 [GRCh38] Chr1:45805930 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+5G>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001064196]|Hereditary cancer-predisposing syndrome [RCV000217740]|not specified [RCV000507237] | Chr1:45340214 [GRCh38] Chr1:45805886 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+3A>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000640392]|Hereditary cancer-predisposing syndrome [RCV000220129]|not provided [RCV000985859] | Chr1:45340216 [GRCh38] Chr1:45805888 [GRCh37] Chr1:1p34.1 |
conflicting interpretations of pathogenicity|uncertain significance |
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3 | copy number loss | not provided [RCV000762767] | Chr1:20608823..120546301 [GRCh37] Chr1:1p36.12-12 |
likely benign |
NM_001128425.2(MUTYH):c.17C>G (p.Ser6Cys) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000640357]|Hereditary cancer-predisposing syndrome [RCV000214713]|not provided [RCV001762479] | Chr1:45340238 [GRCh38] Chr1:45805910 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.2T>C (p.Met1Thr) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000687399]|Gastric cancer [RCV003165560]|Hereditary cancer-predisposing syndrome [RCV000223135]|not provided [RCV001770172]|not specified [RCV002282055] | Chr1:45340253 [GRCh38] Chr1:45805925 [GRCh37] Chr1:1p34.1 |
pathogenic|uncertain significance |
NM_001128425.2(MUTYH):c.12C>A (p.Leu4=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002054981]|Hereditary cancer-predisposing syndrome [RCV000221630] | Chr1:45340243 [GRCh38] Chr1:45805915 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.8C>T (p.Pro3Leu) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000818843]|Hereditary cancer-predisposing syndrome [RCV000215169] | Chr1:45340247 [GRCh38] Chr1:45805919 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.31C>G (p.Leu11Val) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000227994]|Hereditary cancer-predisposing syndrome [RCV001019150] | Chr1:45340224 [GRCh38] Chr1:45805896 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+4C>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001857808]|Hereditary cancer-predisposing syndrome [RCV001020693]|not provided [RCV000766680]|not specified [RCV000237070] | Chr1:45340215 [GRCh38] Chr1:45805887 [GRCh37] Chr1:1p34.1 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001128425.2(MUTYH):c.29G>A (p.Arg10His) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000527208]|Hereditary cancer-predisposing syndrome [RCV000565975]|not specified [RCV001731760] | Chr1:45340226 [GRCh38] Chr1:45805898 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.9G>T (p.Pro3=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000640405]|Hereditary cancer-predisposing syndrome [RCV000566305]|not specified [RCV002232094] | Chr1:45340246 [GRCh38] Chr1:45805918 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.-100C>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000282662] | Chr1:45340354 [GRCh38] Chr1:45806026 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-177T>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000337258] | Chr1:45340431 [GRCh38] Chr1:45806103 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36G>A (p.Trp12Ter) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001853721]|Hereditary cancer-predisposing syndrome [RCV000569145] | Chr1:45340219 [GRCh38] Chr1:45805891 [GRCh37] Chr1:1p34.1 |
pathogenic|likely pathogenic |
NM_001128425.2(MUTYH):c.36+20C>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002531526]|Hereditary cancer-predisposing syndrome [RCV001190147]|not specified [RCV000602790] | Chr1:45340199 [GRCh38] Chr1:45805871 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.9G>A (p.Pro3=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000552322]|Hereditary cancer-predisposing syndrome [RCV003159816] | Chr1:45340246 [GRCh38] Chr1:45805918 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+18T>C | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV000582310] | Chr1:45340201 [GRCh38] Chr1:45805873 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+11C>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002061872]|Hereditary cancer-predisposing syndrome [RCV000584461] | Chr1:45340208 [GRCh38] Chr1:45805880 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.-3G>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV004001274]|Hereditary cancer-predisposing syndrome [RCV000580958] | Chr1:45340257 [GRCh38] Chr1:45805929 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.31C>T (p.Leu11=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000640414]|Hereditary cancer-predisposing syndrome [RCV002325246] | Chr1:45340224 [GRCh38] Chr1:45805896 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.29G>C (p.Arg10Pro) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001065926]|Hereditary cancer-predisposing syndrome [RCV000581823] | Chr1:45340226 [GRCh38] Chr1:45805898 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+1G>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001853782]|Hereditary cancer-predisposing syndrome [RCV000569246]|not provided [RCV000761658] | Chr1:45340218 [GRCh38] Chr1:45805890 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_001128425.2(MUTYH):c.36+7T>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000975667]|Hereditary cancer-predisposing syndrome [RCV000583789]|MUTYH-related disorder [RCV004543290] | Chr1:45340212 [GRCh38] Chr1:45805884 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+1G>C | single nucleotide variant | Gastric cancer [RCV003164713] | Chr1:45340218 [GRCh38] Chr1:45805890 [GRCh37] Chr1:1p34.1 |
pathogenic |
NM_001128425.2(MUTYH):c.36+1del | deletion | Gastric cancer [RCV003164649] | Chr1:45340218 [GRCh38] Chr1:45805890 [GRCh37] Chr1:1p34.1 |
pathogenic |
NM_001128425.2(MUTYH):c.8C>G (p.Pro3Arg) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000695272]|Hereditary cancer-predisposing syndrome [RCV000572771] | Chr1:45340247 [GRCh38] Chr1:45805919 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-13A>C | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001188616]|not specified [RCV000432156] | Chr1:45340267 [GRCh38] Chr1:45805939 [GRCh37] Chr1:1p34.1 |
likely benign|uncertain significance |
GRCh37/hg19 1p34.1-32.3(chr1:45303358-52157856)x1 | copy number loss | See cases [RCV000448358] | Chr1:45303358..52157856 [GRCh37] Chr1:1p34.1-32.3 |
likely pathogenic |
NM_025077.4(TOE1):c.443T>A (p.Phe148Tyr) | single nucleotide variant | Inborn genetic diseases [RCV004678720]|Pontocerebellar hypoplasia type 7 [RCV000477680]|not provided [RCV004722812] | Chr1:45342058 [GRCh38] Chr1:45807730 [GRCh37] Chr1:1p34.1 |
pathogenic|likely pathogenic|uncertain significance |
TOE1, 2-BP DEL | deletion | Pontocerebellar hypoplasia, type 7 [RCV000477688] | Chr1:1p34.1 | pathogenic |
NM_025077.4(TOE1):c.307G>A (p.Ala103Thr) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000477708] | Chr1:45341543 [GRCh38] Chr1:45807215 [GRCh37] Chr1:1p34.1 |
pathogenic|likely pathogenic |
NM_025077.4(TOE1):c.957C>A (p.His319Gln) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000477716] | Chr1:45343126 [GRCh38] Chr1:45808798 [GRCh37] Chr1:1p34.1 |
pathogenic |
NM_025077.4(TOE1):c.658G>A (p.Glu220Lys) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000477732] | Chr1:45342549 [GRCh38] Chr1:45808221 [GRCh37] Chr1:1p34.1 |
pathogenic|likely pathogenic |
NM_025077.4(TOE1):c.518T>G (p.Val173Gly) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000477747] | Chr1:45342409 [GRCh38] Chr1:45808081 [GRCh37] Chr1:1p34.1 |
pathogenic|likely pathogenic |
NM_001128425.2(MUTYH):c.2T>G (p.Met1Arg) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000464651] | Chr1:45340253 [GRCh38] Chr1:45805925 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.9_10delinsAA (p.Leu4Ile) | indel | Familial adenomatous polyposis 2 [RCV002526587]|Hereditary cancer-predisposing syndrome [RCV002376876]|not specified [RCV000481735] | Chr1:45340245..45340246 [GRCh38] Chr1:45805917..45805918 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.34T>C (p.Trp12Arg) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000468941] | Chr1:45340221 [GRCh38] Chr1:45805893 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.35G>A (p.Trp12Ter) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001209233]|Hereditary cancer-predisposing syndrome [RCV003168963]|not provided [RCV000478455] | Chr1:45340220 [GRCh38] Chr1:45805892 [GRCh37] Chr1:1p34.1 |
pathogenic|likely pathogenic |
NM_001128425.2(MUTYH):c.22C>T (p.Leu8=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000476955]|Hereditary cancer-predisposing syndrome [RCV000573715]|MUTYH-related disorder [RCV004535448]|not specified [RCV000610552] | Chr1:45340233 [GRCh38] Chr1:45805905 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+8G>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001421521] | Chr1:45340211 [GRCh38] Chr1:45805883 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+10A>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000466341]|not specified [RCV004689750] | Chr1:45340209 [GRCh38] Chr1:45805881 [GRCh37] Chr1:1p34.1 |
likely benign |
GRCh37/hg19 1p34.1(chr1:45715667-46501705)x3 | copy number gain | See cases [RCV000510158] | Chr1:45715667..46501705 [GRCh37] Chr1:1p34.1 |
uncertain significance |
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 | copy number gain | See cases [RCV000510383] | Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44 |
pathogenic |
NM_001128425.2(MUTYH):c.-127C>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001097391]|Hereditary cancer-predisposing syndrome [RCV000491011]|not provided [RCV000504244] | Chr1:45340381 [GRCh38] Chr1:45806053 [GRCh37] Chr1:1p34.1 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_001128425.2(MUTYH):c.20G>T (p.Arg7Leu) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001238814]|Hereditary cancer-predisposing syndrome [RCV000491930] | Chr1:45340235 [GRCh38] Chr1:45805907 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NC_000001.10:g.(?_33241563)_(46663513_?)dup | duplication | Charcot-Marie-Tooth disease dominant intermediate C [RCV000708276] | Chr1:33241563..46663513 [GRCh37] Chr1:1p35.1-34.1 |
uncertain significance |
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) | copy number gain | See cases [RCV000510926] | Chr1:849467..249224684 [GRCh37] Chr1:1p36.33-q44 |
pathogenic |
NM_025077.4(TOE1):c.1034G>A (p.Arg345Gln) | single nucleotide variant | Inborn genetic diseases [RCV003274614] | Chr1:45343203 [GRCh38] Chr1:45808875 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+6C>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000558522]|Hereditary cancer-predisposing syndrome [RCV000776735] | Chr1:45340213 [GRCh38] Chr1:45805885 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+4C>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000640361]|Hereditary cancer-predisposing syndrome [RCV000574593] | Chr1:45340215 [GRCh38] Chr1:45805887 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.940_941del (p.Gln314fs) | microsatellite | Pontocerebellar hypoplasia type 7 [RCV000477688]|not provided [RCV000627613] | Chr1:45343107..45343108 [GRCh38] Chr1:45808779..45808780 [GRCh37] Chr1:1p34.1 |
pathogenic|conflicting interpretations of pathogenicity |
NM_001128425.2(MUTYH):c.14T>C (p.Val5Ala) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000640354] | Chr1:45340241 [GRCh38] Chr1:45805913 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+7T>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000640404] | Chr1:45340212 [GRCh38] Chr1:45805884 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.-37G>A | single nucleotide variant | not specified [RCV000613964] | Chr1:45340291 [GRCh38] Chr1:45805963 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.733G>T (p.Glu245Ter) | single nucleotide variant | not provided [RCV000627345] | Chr1:45342624 [GRCh38] Chr1:45808296 [GRCh37] Chr1:1p34.1 |
pathogenic|conflicting interpretations of pathogenicity |
NC_000001.10:g.(?_45794968)_(45805936_?)dup | duplication | Familial adenomatous polyposis 2 [RCV000707816] | Chr1:45329296..45340264 [GRCh38] Chr1:45794968..45805936 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.19C>T (p.Arg7Cys) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000698395]|Hereditary cancer-predisposing syndrome [RCV004026444] | Chr1:45340236 [GRCh38] Chr1:45805908 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+4dup | duplication | Familial adenomatous polyposis 2 [RCV000695258]|Hereditary cancer-predisposing syndrome [RCV000776728]|not provided [RCV003478421] | Chr1:45340214..45340215 [GRCh38] Chr1:45805886..45805887 [GRCh37] Chr1:1p34.1 |
uncertain significance |
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 | copy number gain | not provided [RCV000736295] | Chr1:47851..249228449 [GRCh37] Chr1:1p36.33-q44 |
pathogenic |
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 | copy number gain | not provided [RCV000736305] | Chr1:82154..249218992 [GRCh37] Chr1:1p36.33-q44 |
pathogenic |
GRCh37/hg19 1p36.22-21.1(chr1:103343285-103455144)x3 | copy number gain | Global developmental delay [RCV000787285] | Chr1:103343285..103455144 [GRCh37] Chr1:1p36.22-21.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-126T>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000986310] | Chr1:45340380 [GRCh38] Chr1:45806052 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.270T>C (p.His90=) | single nucleotide variant | not provided [RCV000969137] | Chr1:45341506 [GRCh38] Chr1:45807178 [GRCh37] Chr1:1p34.1 |
benign |
NM_025077.4(TOE1):c.73A>G (p.Thr25Ala) | single nucleotide variant | not provided [RCV000926105] | Chr1:45341093 [GRCh38] Chr1:45806765 [GRCh37] Chr1:1p34.1 |
benign |
NM_001128425.2(MUTYH):c.-19A>G | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV000772790] | Chr1:45340273 [GRCh38] Chr1:45805945 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+9G>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000937891]|Hereditary cancer-predisposing syndrome [RCV000772838]|not specified [RCV003387925] | Chr1:45340210 [GRCh38] Chr1:45805882 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.10C>T (p.Leu4Phe) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000804149]|Hereditary cancer-predisposing syndrome [RCV000772839]|not specified [RCV003387926] | Chr1:45340245 [GRCh38] Chr1:45805917 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-2C>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003461014]|Hereditary cancer-predisposing syndrome [RCV001017945]|not provided [RCV000759160] | Chr1:45340256 [GRCh38] Chr1:45805928 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.13G>A (p.Val5Ile) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003461040]|Hereditary cancer-predisposing syndrome [RCV000776242] | Chr1:45340242 [GRCh38] Chr1:45805914 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.196-3C>T | single nucleotide variant | TOE1-related disorder [RCV003960551]|not provided [RCV000942966]|not specified [RCV001818917] | Chr1:45341300 [GRCh38] Chr1:45806972 [GRCh37] Chr1:1p34.1 |
benign|likely benign |
NM_025077.4(TOE1):c.930C>T (p.Pro310=) | single nucleotide variant | not provided [RCV000982957] | Chr1:45343099 [GRCh38] Chr1:45808771 [GRCh37] Chr1:1p34.1 |
benign |
NM_025077.4(TOE1):c.104C>T (p.Pro35Leu) | single nucleotide variant | not provided [RCV000945020] | Chr1:45341124 [GRCh38] Chr1:45806796 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1176G>A (p.Leu392=) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV002503005]|not provided [RCV000961003]|not specified [RCV001819030] | Chr1:45343345 [GRCh38] Chr1:45809017 [GRCh37] Chr1:1p34.1 |
benign|likely benign |
NM_025077.4(TOE1):c.897C>T (p.Ile299=) | single nucleotide variant | TOE1-related disorder [RCV003978324]|not provided [RCV000958453]|not specified [RCV001819015] | Chr1:45342987 [GRCh38] Chr1:45808659 [GRCh37] Chr1:1p34.1 |
benign|likely benign |
NM_025077.4(TOE1):c.1379C>T (p.Pro460Leu) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV002502991]|TOE1-related disorder [RCV003978325]|not provided [RCV000958454]|not specified [RCV001819016] | Chr1:45343548 [GRCh38] Chr1:45809220 [GRCh37] Chr1:1p34.1 |
benign|likely benign |
NM_001128425.2(MUTYH):c.26G>A (p.Ser9Asn) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000800108] | Chr1:45340229 [GRCh38] Chr1:45805901 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-180T>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000986312] | Chr1:45340434 [GRCh38] Chr1:45806106 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.717C>T (p.Phe239=) | single nucleotide variant | not provided [RCV000915578] | Chr1:45342608 [GRCh38] Chr1:45808280 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.937C>G (p.Pro313Ala) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000851252] | Chr1:45343106 [GRCh38] Chr1:45808778 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.1487C>T (p.Ser496Phe) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000851259] | Chr1:45343656 [GRCh38] Chr1:45809328 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NC_000001.11:g.(?_45329306)_(45343656_?)dup | duplication | Familial adenomatous polyposis 2 [RCV001032014] | Chr1:45794978..45809328 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.957C>T (p.His319=) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000851253] | Chr1:45343126 [GRCh38] Chr1:45808798 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_001128425.2(MUTYH):c.-147C>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV000986311] | Chr1:45340401 [GRCh38] Chr1:45806073 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.35G>C (p.Trp12Ser) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001351536]|Hereditary cancer-predisposing syndrome [RCV001020690] | Chr1:45340220 [GRCh38] Chr1:45805892 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.1_7dup (p.Pro3fs) | duplication | Familial adenomatous polyposis 2 [RCV001233094] | Chr1:45340247..45340248 [GRCh38] Chr1:45805919..45805920 [GRCh37] Chr1:1p34.1 |
pathogenic |
NM_001128425.2(MUTYH):c.19C>G (p.Arg7Gly) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001216494] | Chr1:45340236 [GRCh38] Chr1:45805908 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.955C>T (p.His319Tyr) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000851254]|TOE1-related disorder [RCV003892775] | Chr1:45343124 [GRCh38] Chr1:45808796 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.219G>C (p.Arg73Ser) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000851255] | Chr1:45341326 [GRCh38] Chr1:45806998 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.716T>C (p.Phe239Ser) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000851256] | Chr1:45342607 [GRCh38] Chr1:45808279 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.757C>T (p.Arg253Trp) | single nucleotide variant | Inborn genetic diseases [RCV002538360]|Pontocerebellar hypoplasia type 7 [RCV000851257]|not provided [RCV003235419] | Chr1:45342847 [GRCh38] Chr1:45808519 [GRCh37] Chr1:1p34.1 |
likely pathogenic|uncertain significance |
NM_025077.4(TOE1):c.693T>A (p.Tyr231Ter) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV000851258] | Chr1:45342584 [GRCh38] Chr1:45808256 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.448C>T (p.Gln150Ter) | single nucleotide variant | not provided [RCV001053043] | Chr1:45342063 [GRCh38] Chr1:45807735 [GRCh37] Chr1:1p34.1 |
pathogenic |
NC_000001.10:g.(?_45800053)_(45809328_?)dup | duplication | Familial adenomatous polyposis 2 [RCV003105466] | Chr1:45800053..45809328 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1476C>G (p.Phe492Leu) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV003232051] | Chr1:45343645 [GRCh38] Chr1:45809317 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NC_000001.11:g.45340760C>T | single nucleotide variant | not provided [RCV001597814] | Chr1:45340760 [GRCh38] Chr1:45806432 [GRCh37] Chr1:1p34.1 |
benign |
NM_025077.4(TOE1):c.638C>A (p.Thr213Asn) | single nucleotide variant | not provided [RCV001587018] | Chr1:45342529 [GRCh38] Chr1:45808201 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-13A>T | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001188222] | Chr1:45340267 [GRCh38] Chr1:45805939 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-15T>C | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001179411] | Chr1:45340269 [GRCh38] Chr1:45805941 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.9G>C (p.Pro3=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002549511]|Hereditary cancer-predisposing syndrome [RCV001019976] | Chr1:45340246 [GRCh38] Chr1:45805918 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1131T>C (p.Pro377=) | single nucleotide variant | not provided [RCV000935326] | Chr1:45343300 [GRCh38] Chr1:45808972 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.913-4C>T | single nucleotide variant | not provided [RCV000934434] | Chr1:45343078 [GRCh38] Chr1:45808750 [GRCh37] Chr1:1p34.1 |
likely benign |
GRCh37/hg19 1p34.1(chr1:45794978-45805926)x3 | copy number gain | not provided [RCV000994334] | Chr1:45794978..45805926 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.1A>G (p.Met1Val) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001066037]|Hereditary cancer-predisposing syndrome [RCV001188722] | Chr1:45340254 [GRCh38] Chr1:45805926 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NC_000001.11:g.45340694G>A | single nucleotide variant | not provided [RCV001592270] | Chr1:45340694 [GRCh38] Chr1:45806366 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.13G>T (p.Val5Phe) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001177255] | Chr1:45340242 [GRCh38] Chr1:45805914 [GRCh37] Chr1:1p34.1 |
uncertain significance |
GRCh37/hg19 1p34.1(chr1:45386263-45982314)x1 | copy number loss | not provided [RCV001005083] | Chr1:45386263..45982314 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.28C>T (p.Arg10Cys) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001189247] | Chr1:45340227 [GRCh38] Chr1:45805899 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.23T>G (p.Leu8Arg) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001873264]|Hereditary cancer-predisposing syndrome [RCV001015414] | Chr1:45340232 [GRCh38] Chr1:45805904 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+9G>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001410528]|Hereditary cancer-predisposing syndrome [RCV001179409] | Chr1:45340210 [GRCh38] Chr1:45805882 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.3G>A (p.Met1Ile) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001179410] | Chr1:45340252 [GRCh38] Chr1:45805924 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.28C>A (p.Arg10Ser) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001016909] | Chr1:45340227 [GRCh38] Chr1:45805899 [GRCh37] Chr1:1p34.1 |
likely benign |
NC_000001.11:g.(?_45340209)_(45343656_?)dup | duplication | Familial adenomatous polyposis 2 [RCV001033110] | Chr1:45805881..45809328 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+3A>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001069583] | Chr1:45340216 [GRCh38] Chr1:45805888 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-11T>C | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001187159] | Chr1:45340265 [GRCh38] Chr1:45805937 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.237-2A>G | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV001678596] | Chr1:45341471 [GRCh38] Chr1:45807143 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NC_000001.11:g.(?_44822405)_(45340264_?)dup | duplication | Familial adenomatous polyposis 2 [RCV001031167] | Chr1:45288077..45805936 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.76T>G (p.Ser26Ala) | single nucleotide variant | not provided [RCV001682404] | Chr1:45341096 [GRCh38] Chr1:45806768 [GRCh37] Chr1:1p34.1 |
benign |
NM_001128425.2(MUTYH):c.-165C>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001097392] | Chr1:45340419 [GRCh38] Chr1:45806091 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.34T>A (p.Trp12Arg) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001207308] | Chr1:45340221 [GRCh38] Chr1:45805893 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.32T>G (p.Leu11Arg) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002551820]|Hereditary cancer-predisposing syndrome [RCV001019783]|not provided [RCV001766848] | Chr1:45340223 [GRCh38] Chr1:45805895 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.24G>C (p.Leu8=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002068920]|Hereditary cancer-predisposing syndrome [RCV001015727] | Chr1:45340231 [GRCh38] Chr1:45805903 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.913-2A>G | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV001196657] | Chr1:45343080 [GRCh38] Chr1:45808752 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.539T>A (p.Leu180Gln) | single nucleotide variant | Inborn genetic diseases [RCV001266512] | Chr1:45342430 [GRCh38] Chr1:45808102 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.544C>T (p.Arg182Ter) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV002221842] | Chr1:45342435 [GRCh38] Chr1:45808107 [GRCh37] Chr1:1p34.1 |
pathogenic|likely pathogenic |
NC_000001.10:g.(?_33241563)_(46663513_?)dup | duplication | Charcot-Marie-Tooth disease, dominant intermediate C [RCV001308684] | Chr1:33241563..46663513 [GRCh37] Chr1:1p35.1-34.1 |
uncertain significance |
NM_025077.4(TOE1):c.745C>T (p.Arg249Trp) | single nucleotide variant | not provided [RCV001339854] | Chr1:45342636 [GRCh38] Chr1:45808308 [GRCh37] Chr1:1p34.1 |
conflicting interpretations of pathogenicity|uncertain significance |
NC_000001.10:g.(?_45794968)_(45805936_?)dup | duplication | MYH-associated polyposis [RCV001313631] | Chr1:45794968..45805936 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.12C>T (p.Leu4=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001415482]|Hereditary cancer-predisposing syndrome [RCV002256767] | Chr1:45340243 [GRCh38] Chr1:45805915 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.4A>C (p.Thr2Pro) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001297434] | Chr1:45340251 [GRCh38] Chr1:45805923 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.2T>A (p.Met1Lys) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001307520] | Chr1:45340253 [GRCh38] Chr1:45805925 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1439G>A (p.Gly480Asp) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV001330030]|not provided [RCV001871807] | Chr1:45343608 [GRCh38] Chr1:45809280 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1240del (p.Glu413_Ile414insTer) | deletion | not provided [RCV001363489] | Chr1:45343407 [GRCh38] Chr1:45809079 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NC_000001.10:g.(?_45794978)_(45809328_?)dup | duplication | MYH-associated polyposis [RCV001299852] | Chr1:45794978..45809328 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1159G>A (p.Asp387Asn) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV001330029]|not provided [RCV001863211] | Chr1:45343328 [GRCh38] Chr1:45809000 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.551G>T (p.Arg184Leu) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV001682617] | Chr1:45342442 [GRCh38] Chr1:45808114 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.196-42G>A | single nucleotide variant | not provided [RCV001714808] | Chr1:45341261 [GRCh38] Chr1:45806933 [GRCh37] Chr1:1p34.1 |
benign |
NM_001128425.2(MUTYH):c.-3G>A | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV001524468] | Chr1:45340257 [GRCh38] Chr1:45805929 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1469G>A (p.Ser490Asn) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV002251265] | Chr1:45343638 [GRCh38] Chr1:45809310 [GRCh37] Chr1:1p34.1 |
uncertain significance |
GRCh37/hg19 1p34.1(chr1:44346001-46332161)x3 | copy number gain | See cases [RCV002246181] | Chr1:44346001..46332161 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1016G>A (p.Arg339Gln) | single nucleotide variant | not provided [RCV001754992] | Chr1:45343185 [GRCh38] Chr1:45808857 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1062del (p.Thr355fs) | deletion | Pontocerebellar hypoplasia type 7 [RCV002251067] | Chr1:45343228 [GRCh38] Chr1:45808900 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.1172del (p.Asn391fs) | deletion | See cases [RCV002253037] | Chr1:45343340 [GRCh38] Chr1:45809012 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.204T>G (p.Ser68Arg) | single nucleotide variant | not provided [RCV001772567] | Chr1:45341311 [GRCh38] Chr1:45806983 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1018C>T (p.Arg340Ter) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV001783889] | Chr1:45343187 [GRCh38] Chr1:45808859 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.343del (p.Ser115fs) | deletion | Pontocerebellar hypoplasia type 7 [RCV001785076] | Chr1:45341957 [GRCh38] Chr1:45807629 [GRCh37] Chr1:1p34.1 |
pathogenic |
NM_025077.4(TOE1):c.492+5G>A | single nucleotide variant | Inborn genetic diseases [RCV002542027]|TOE1-related disorder [RCV003956400]|not provided [RCV001869693]|not specified [RCV001819444] | Chr1:45342112 [GRCh38] Chr1:45807784 [GRCh37] Chr1:1p34.1 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_025077.4(TOE1):c.106G>A (p.Val36Ile) | single nucleotide variant | not provided [RCV001885314]|not specified [RCV001822247] | Chr1:45341126 [GRCh38] Chr1:45806798 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36G>T (p.Trp12Cys) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001999437] | Chr1:45340219 [GRCh38] Chr1:45805891 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NC_000001.10:g.(?_45288087)_(45809328_?)dup | duplication | Familial adenomatous polyposis 2 [RCV001877385] | Chr1:45288087..45809328 [GRCh37] Chr1:1p34.1 |
uncertain significance |
GRCh37/hg19 1p34.1-32.3(chr1:45303358-52157856) | copy number loss | not specified [RCV002053281] | Chr1:45303358..52157856 [GRCh37] Chr1:1p34.1-32.3 |
likely pathogenic |
NM_001128425.2(MUTYH):c.36G>C (p.Trp12Cys) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001878606] | Chr1:45340219 [GRCh38] Chr1:45805891 [GRCh37] Chr1:1p34.1 |
uncertain significance |
GRCh37/hg19 1p35.1-33(chr1:33285582-47891811) | copy number gain | not specified [RCV002052781] | Chr1:33285582..47891811 [GRCh37] Chr1:1p35.1-33 |
pathogenic |
NM_025077.4(TOE1):c.940C>G (p.Gln314Glu) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV003136393]|not provided [RCV001971217] | Chr1:45343109 [GRCh38] Chr1:45808781 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.1A>C (p.Met1Leu) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001874964] | Chr1:45340254 [GRCh38] Chr1:45805926 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1104G>C (p.Lys368Asn) | single nucleotide variant | not provided [RCV001929013] | Chr1:45343273 [GRCh38] Chr1:45808945 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.776G>A (p.Arg259Gln) | single nucleotide variant | Inborn genetic diseases [RCV002555730]|TOE1-related disorder [RCV003913442]|not provided [RCV001910072] | Chr1:45342866 [GRCh38] Chr1:45808538 [GRCh37] Chr1:1p34.1 |
likely benign|uncertain significance |
NM_025077.4(TOE1):c.325C>A (p.Pro109Thr) | single nucleotide variant | not provided [RCV001889277] | Chr1:45341561 [GRCh38] Chr1:45807233 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1379C>A (p.Pro460Gln) | single nucleotide variant | not provided [RCV001987417] | Chr1:45343548 [GRCh38] Chr1:45809220 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.5C>T (p.Thr2Ile) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002014531] | Chr1:45340250 [GRCh38] Chr1:45805922 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.20G>A (p.Arg7His) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002048722] | Chr1:45340235 [GRCh38] Chr1:45805907 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1481G>A (p.Arg494His) | single nucleotide variant | not provided [RCV002014187] | Chr1:45343650 [GRCh38] Chr1:45809322 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+5G>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001928919] | Chr1:45340214 [GRCh38] Chr1:45805886 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1358A>T (p.Tyr453Phe) | single nucleotide variant | not provided [RCV001994005] | Chr1:45343527 [GRCh38] Chr1:45809199 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1160A>G (p.Asp387Gly) | single nucleotide variant | not provided [RCV001982540] | Chr1:45343329 [GRCh38] Chr1:45809001 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NC_000001.10:g.(?_45805881)_(45809328_?)del | deletion | Familial adenomatous polyposis 2 [RCV001962995] | Chr1:45805881..45809328 [GRCh37] Chr1:1p34.1 |
pathogenic |
NM_001128425.2(MUTYH):c.21C>T (p.Arg7=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV001942311] | Chr1:45340234 [GRCh38] Chr1:45805906 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.550C>T (p.Arg184Cys) | single nucleotide variant | Inborn genetic diseases [RCV002548186]|not provided [RCV002016638] | Chr1:45342441 [GRCh38] Chr1:45808113 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.655T>C (p.Cys219Arg) | single nucleotide variant | not provided [RCV001996403] | Chr1:45342546 [GRCh38] Chr1:45808218 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.77C>G (p.Ser26Cys) | single nucleotide variant | not provided [RCV002017855] | Chr1:45341097 [GRCh38] Chr1:45806769 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.554G>A (p.Arg185Gln) | single nucleotide variant | not provided [RCV001980842] | Chr1:45342445 [GRCh38] Chr1:45808117 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.533T>G (p.Leu178Arg) | single nucleotide variant | not provided [RCV001997190] | Chr1:45342424 [GRCh38] Chr1:45808096 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.880C>A (p.Pro294Thr) | single nucleotide variant | not provided [RCV001993785] | Chr1:45342970 [GRCh38] Chr1:45808642 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.261C>T (p.Ala87=) | single nucleotide variant | not provided [RCV001900541] | Chr1:45341497 [GRCh38] Chr1:45807169 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.866C>T (p.Pro289Leu) | single nucleotide variant | not provided [RCV001923475] | Chr1:45342956 [GRCh38] Chr1:45808628 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.993G>A (p.Ala331=) | single nucleotide variant | not provided [RCV002130136] | Chr1:45343162 [GRCh38] Chr1:45808834 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.53-16C>G | single nucleotide variant | not provided [RCV002185694] | Chr1:45341057 [GRCh38] Chr1:45806729 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+9del | deletion | Familial adenomatous polyposis 2 [RCV002146462] | Chr1:45340210 [GRCh38] Chr1:45805882 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.827G>C (p.Ser276Thr) | single nucleotide variant | Inborn genetic diseases [RCV004046321]|not provided [RCV002127348] | Chr1:45342917 [GRCh38] Chr1:45808589 [GRCh37] Chr1:1p34.1 |
benign|likely benign |
NM_025077.4(TOE1):c.752+9A>G | single nucleotide variant | not provided [RCV002168284] | Chr1:45342652 [GRCh38] Chr1:45808324 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.255C>T (p.Tyr85=) | single nucleotide variant | not provided [RCV002146564] | Chr1:45341491 [GRCh38] Chr1:45807163 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.58G>C (p.Val20Leu) | single nucleotide variant | not provided [RCV002116025] | Chr1:45341078 [GRCh38] Chr1:45806750 [GRCh37] Chr1:1p34.1 |
benign |
NM_025077.4(TOE1):c.354T>C (p.Ala118=) | single nucleotide variant | not provided [RCV002132973] | Chr1:45341969 [GRCh38] Chr1:45807641 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.753-17C>T | single nucleotide variant | not provided [RCV002133626] | Chr1:45342826 [GRCh38] Chr1:45808498 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.334-15T>G | single nucleotide variant | not provided [RCV002079157] | Chr1:45341934 [GRCh38] Chr1:45807606 [GRCh37] Chr1:1p34.1 |
benign |
NM_025077.4(TOE1):c.1515C>T (p.Leu505=) | single nucleotide variant | not provided [RCV002167035] | Chr1:45343684 [GRCh38] Chr1:45809356 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1022G>A (p.Arg341His) | single nucleotide variant | not provided [RCV002221127] | Chr1:45343191 [GRCh38] Chr1:45808863 [GRCh37] Chr1:1p34.1 |
benign |
NM_025077.4(TOE1):c.438C>T (p.Phe146=) | single nucleotide variant | TOE1-related disorder [RCV003933346]|not provided [RCV002217317] | Chr1:45342053 [GRCh38] Chr1:45807725 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.615A>G (p.Ala205=) | single nucleotide variant | not provided [RCV002175234] | Chr1:45342506 [GRCh38] Chr1:45808178 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1140C>T (p.Thr380=) | single nucleotide variant | not provided [RCV002143762] | Chr1:45343309 [GRCh38] Chr1:45808981 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.360G>A (p.Val120=) | single nucleotide variant | not provided [RCV002082492] | Chr1:45341975 [GRCh38] Chr1:45807647 [GRCh37] Chr1:1p34.1 |
likely benign |
NC_000001.10:g.(?_44257753)_(46663493_?)dup | duplication | Early infantile epileptic encephalopathy with suppression bursts [RCV003109481] | Chr1:44257753..46663493 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.105C>T (p.Pro35=) | single nucleotide variant | not provided [RCV003121934] | Chr1:45341125 [GRCh38] Chr1:45806797 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1063A>T (p.Thr355Ser) | single nucleotide variant | TOE1-related disorder [RCV003973763]|not provided [RCV003118833] | Chr1:45343232 [GRCh38] Chr1:45808904 [GRCh37] Chr1:1p34.1 |
likely benign|uncertain significance |
NM_025077.4(TOE1):c.371C>T (p.Thr124Ile) | single nucleotide variant | Inborn genetic diseases [RCV003358138]|not provided [RCV003119051] | Chr1:45341986 [GRCh38] Chr1:45807658 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.911C>T (p.Ser304Leu) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV002244243] | Chr1:45343001 [GRCh38] Chr1:45808673 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.33G>A (p.Leu11=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003505212]|Hereditary cancer-predisposing syndrome [RCV002452049] | Chr1:45340222 [GRCh38] Chr1:45805894 [GRCh37] Chr1:1p34.1 |
likely benign|uncertain significance |
NM_001128425.2(MUTYH):c.36+2T>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV004005636]|Hereditary cancer-predisposing syndrome [RCV002455202] | Chr1:45340217 [GRCh38] Chr1:45805889 [GRCh37] Chr1:1p34.1 |
likely pathogenic|uncertain significance |
NM_025077.4(TOE1):c.453G>T (p.Gln151His) | single nucleotide variant | not provided [RCV002297388] | Chr1:45342068 [GRCh38] Chr1:45807740 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.746G>A (p.Arg249Gln) | single nucleotide variant | Inborn genetic diseases [RCV003280436] | Chr1:45342637 [GRCh38] Chr1:45808309 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.3G>C (p.Met1Ile) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV002375653] | Chr1:45340252 [GRCh38] Chr1:45805924 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.480G>C (p.Lys160Asn) | single nucleotide variant | not provided [RCV002305202] | Chr1:45342095 [GRCh38] Chr1:45807767 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-5C>T | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV002357981] | Chr1:45340259 [GRCh38] Chr1:45805931 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.237-10C>G | single nucleotide variant | not provided [RCV002839349] | Chr1:45341463 [GRCh38] Chr1:45807135 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.337G>A (p.Glu113Lys) | single nucleotide variant | not provided [RCV002731518] | Chr1:45341952 [GRCh38] Chr1:45807624 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1393T>C (p.Ser465Pro) | single nucleotide variant | Inborn genetic diseases [RCV002772528] | Chr1:45343562 [GRCh38] Chr1:45809234 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.195+12G>A | single nucleotide variant | not provided [RCV002636143] | Chr1:45341227 [GRCh38] Chr1:45806899 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.447C>T (p.Asn149=) | single nucleotide variant | TOE1-related disorder [RCV003943623]|not provided [RCV002948187] | Chr1:45342062 [GRCh38] Chr1:45807734 [GRCh37] Chr1:1p34.1 |
benign|likely benign |
NM_025077.4(TOE1):c.1356C>T (p.Ala452=) | single nucleotide variant | not provided [RCV002616483] | Chr1:45343525 [GRCh38] Chr1:45809197 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.577C>T (p.Leu193Phe) | single nucleotide variant | Inborn genetic diseases [RCV002839782] | Chr1:45342468 [GRCh38] Chr1:45808140 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.73A>T (p.Thr25Ser) | single nucleotide variant | Inborn genetic diseases [RCV002954116]|not provided [RCV002970624] | Chr1:45341093 [GRCh38] Chr1:45806765 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1401C>T (p.Pro467=) | single nucleotide variant | not provided [RCV002994413] | Chr1:45343570 [GRCh38] Chr1:45809242 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1054C>T (p.Leu352=) | single nucleotide variant | not provided [RCV002858352] | Chr1:45343223 [GRCh38] Chr1:45808895 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.382A>G (p.Met128Val) | single nucleotide variant | Inborn genetic diseases [RCV002773386] | Chr1:45341997 [GRCh38] Chr1:45807669 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.851G>A (p.Arg284His) | single nucleotide variant | not provided [RCV002755301] | Chr1:45342941 [GRCh38] Chr1:45808613 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1213_1215dup (p.Met405_Gly406insMet) | duplication | not provided [RCV002615946] | Chr1:45343380..45343381 [GRCh38] Chr1:45809052..45809053 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+16G>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002885510] | Chr1:45340203 [GRCh38] Chr1:45805875 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.553C>T (p.Arg185Trp) | single nucleotide variant | not provided [RCV002571789] | Chr1:45342444 [GRCh38] Chr1:45808116 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.115G>T (p.Val39Leu) | single nucleotide variant | not provided [RCV002949671] | Chr1:45341135 [GRCh38] Chr1:45806807 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1405C>T (p.Leu469Phe) | single nucleotide variant | not provided [RCV002570097] | Chr1:45343574 [GRCh38] Chr1:45809246 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.344C>T (p.Ser115Phe) | single nucleotide variant | not provided [RCV002927618] | Chr1:45341959 [GRCh38] Chr1:45807631 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1264G>A (p.Val422Met) | single nucleotide variant | Inborn genetic diseases [RCV002694182] | Chr1:45343433 [GRCh38] Chr1:45809105 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.195+11G>A | single nucleotide variant | not provided [RCV002569734] | Chr1:45341226 [GRCh38] Chr1:45806898 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.333+12T>C | single nucleotide variant | not provided [RCV003000098] | Chr1:45341581 [GRCh38] Chr1:45807253 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.752+16A>T | single nucleotide variant | not provided [RCV002870865] | Chr1:45342659 [GRCh38] Chr1:45808331 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1097C>T (p.Pro366Leu) | single nucleotide variant | Inborn genetic diseases [RCV002962757]|not provided [RCV002949514] | Chr1:45343266 [GRCh38] Chr1:45808938 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.27_28del (p.Ser9fs) | deletion | Familial adenomatous polyposis 2 [RCV002917663] | Chr1:45340227..45340228 [GRCh38] Chr1:45805899..45805900 [GRCh37] Chr1:1p34.1 |
pathogenic |
NM_025077.4(TOE1):c.912G>A (p.Ser304=) | single nucleotide variant | not provided [RCV002574374] | Chr1:45343002 [GRCh38] Chr1:45808674 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.416A>T (p.Gln139Leu) | single nucleotide variant | Inborn genetic diseases [RCV002767993] | Chr1:45342031 [GRCh38] Chr1:45807703 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.242T>C (p.Ile81Thr) | single nucleotide variant | Inborn genetic diseases [RCV002937879]|Pontocerebellar hypoplasia type 7 [RCV004594658]|not provided [RCV002918963] | Chr1:45341478 [GRCh38] Chr1:45807150 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.234C>A (p.Asn78Lys) | single nucleotide variant | not provided [RCV003007248] | Chr1:45341341 [GRCh38] Chr1:45807013 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.787A>G (p.Ser263Gly) | single nucleotide variant | not provided [RCV002625860] | Chr1:45342877 [GRCh38] Chr1:45808549 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1189C>A (p.Gln397Lys) | single nucleotide variant | not provided [RCV003025049] | Chr1:45343358 [GRCh38] Chr1:45809030 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1347T>C (p.Tyr449=) | single nucleotide variant | TOE1-related disorder [RCV003963343]|not provided [RCV002765518] | Chr1:45343516 [GRCh38] Chr1:45809188 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.19G>A (p.Asp7Asn) | single nucleotide variant | Inborn genetic diseases [RCV002709095]|not specified [RCV004596570] | Chr1:45340271 [GRCh38] Chr1:45805943 [GRCh37] Chr1:1p34.1 |
likely benign|uncertain significance |
NM_025077.4(TOE1):c.1010G>A (p.Arg337Gln) | single nucleotide variant | not provided [RCV002601471] | Chr1:45343179 [GRCh38] Chr1:45808851 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.132C>A (p.Phe44Leu) | single nucleotide variant | not provided [RCV003091982] | Chr1:45341152 [GRCh38] Chr1:45806824 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.912+12del | deletion | not provided [RCV002600959] | Chr1:45343012 [GRCh38] Chr1:45808684 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.23T>C (p.Leu8Pro) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003049314]|Hereditary cancer-predisposing syndrome [RCV003170923] | Chr1:45340232 [GRCh38] Chr1:45805904 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.32T>C (p.Leu11Pro) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003011060] | Chr1:45340223 [GRCh38] Chr1:45805895 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1368G>A (p.Val456=) | single nucleotide variant | not provided [RCV002597953] | Chr1:45343537 [GRCh38] Chr1:45809209 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.4G>A (p.Ala2Thr) | single nucleotide variant | not provided [RCV002812075] | Chr1:45340256 [GRCh38] Chr1:45805928 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+5G>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002856660] | Chr1:45340214 [GRCh38] Chr1:45805886 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.992C>T (p.Ala331Val) | single nucleotide variant | Inborn genetic diseases [RCV002669352] | Chr1:45343161 [GRCh38] Chr1:45808833 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.494G>A (p.Gly165Asp) | single nucleotide variant | not provided [RCV002649322] | Chr1:45342385 [GRCh38] Chr1:45808057 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.837C>T (p.Asp279=) | single nucleotide variant | not provided [RCV003011102] | Chr1:45342927 [GRCh38] Chr1:45808599 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.168G>A (p.Lys56=) | single nucleotide variant | TOE1-related disorder [RCV003953957]|not provided [RCV002629420] | Chr1:45341188 [GRCh38] Chr1:45806860 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1397G>A (p.Gly466Glu) | single nucleotide variant | Inborn genetic diseases [RCV002703000] | Chr1:45343566 [GRCh38] Chr1:45809238 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.753-19C>T | single nucleotide variant | not provided [RCV002600291] | Chr1:45342824 [GRCh38] Chr1:45808496 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.147A>G (p.Pro49=) | single nucleotide variant | not provided [RCV002675515] | Chr1:45341167 [GRCh38] Chr1:45806839 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.824C>A (p.Ser275Tyr) | single nucleotide variant | Inborn genetic diseases [RCV002919809] | Chr1:45342914 [GRCh38] Chr1:45808586 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.433G>A (p.Gly145Ser) | single nucleotide variant | Inborn genetic diseases [RCV002831474] | Chr1:45342048 [GRCh38] Chr1:45807720 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+4C>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002715540] | Chr1:45340215 [GRCh38] Chr1:45805887 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.668del (p.Pro223fs) | deletion | not provided [RCV002770936] | Chr1:45342557 [GRCh38] Chr1:45808229 [GRCh37] Chr1:1p34.1 |
pathogenic|uncertain significance |
NM_025077.4(TOE1):c.1058C>T (p.Pro353Leu) | single nucleotide variant | not provided [RCV002654560] | Chr1:45343227 [GRCh38] Chr1:45808899 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.868G>A (p.Ala290Thr) | single nucleotide variant | Inborn genetic diseases [RCV003349048]|not provided [RCV002603773] | Chr1:45342958 [GRCh38] Chr1:45808630 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.878G>A (p.Arg293His) | single nucleotide variant | not provided [RCV002583285] | Chr1:45342968 [GRCh38] Chr1:45808640 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.236+7A>G | single nucleotide variant | not provided [RCV003071643] | Chr1:45341350 [GRCh38] Chr1:45807022 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.718G>A (p.Val240Met) | single nucleotide variant | Inborn genetic diseases [RCV003072180]|not provided [RCV003072179] | Chr1:45342609 [GRCh38] Chr1:45808281 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+16G>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV002604175] | Chr1:45340203 [GRCh38] Chr1:45805875 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.297C>G (p.Ser99=) | single nucleotide variant | not provided [RCV002608218] | Chr1:45341533 [GRCh38] Chr1:45807205 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1315C>T (p.Arg439Trp) | single nucleotide variant | not provided [RCV002589169] | Chr1:45343484 [GRCh38] Chr1:45809156 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.20A>G (p.Asp7Gly) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV003141096] | Chr1:45340272 [GRCh38] Chr1:45805944 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.581T>C (p.Ile194Thr) | single nucleotide variant | Inborn genetic diseases [RCV003181078] | Chr1:45342472 [GRCh38] Chr1:45808144 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.850C>T (p.Arg284Cys) | single nucleotide variant | Inborn genetic diseases [RCV003186330] | Chr1:45342940 [GRCh38] Chr1:45808612 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.826A>G (p.Ser276Gly) | single nucleotide variant | Inborn genetic diseases [RCV003358874] | Chr1:45342916 [GRCh38] Chr1:45808588 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1157C>A (p.Ala386Asp) | single nucleotide variant | Inborn genetic diseases [RCV003371734] | Chr1:45343326 [GRCh38] Chr1:45808998 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.509G>T (p.Ser170Ile) | single nucleotide variant | Inborn genetic diseases [RCV003378340] | Chr1:45342400 [GRCh38] Chr1:45808072 [GRCh37] Chr1:1p34.1 |
uncertain significance |
GRCh37/hg19 1p34.1(chr1:45665404-45955823)x3 | copy number gain | not provided [RCV003484012] | Chr1:45665404..45955823 [GRCh37] Chr1:1p34.1 |
uncertain significance |
Single allele | inversion | Bilateral polymicrogyria [RCV003459046] | Chr1:33246132..61045156 [GRCh38] Chr1:1p35.1-31.3 |
likely pathogenic |
NM_025077.4(TOE1):c.908_910del (p.Phe303del) | deletion | TOE1-related disorder [RCV003402521] | Chr1:45342996..45342998 [GRCh38] Chr1:45808668..45808670 [GRCh37] Chr1:1p34.1 |
likely pathogenic|uncertain significance |
NM_001128425.2(MUTYH):c.-6G>T | single nucleotide variant | not provided [RCV003442554] | Chr1:45340260 [GRCh38] Chr1:45805932 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+16G>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003614510] | Chr1:45340203 [GRCh38] Chr1:45805875 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+13T>G | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003614597] | Chr1:45340206 [GRCh38] Chr1:45805878 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+18T>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003504952] | Chr1:45340201 [GRCh38] Chr1:45805873 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+9G>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003614389] | Chr1:45340210 [GRCh38] Chr1:45805882 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+13T>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003614792] | Chr1:45340206 [GRCh38] Chr1:45805878 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.14_36+4dup | duplication | Familial adenomatous polyposis 2 [RCV003614950] | Chr1:45340214..45340215 [GRCh38] Chr1:45805886..45805887 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.1029A>G (p.Glu343=) | single nucleotide variant | not provided [RCV003545226] | Chr1:45343198 [GRCh38] Chr1:45808870 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.913-12T>A | single nucleotide variant | not provided [RCV003829359] | Chr1:45343070 [GRCh38] Chr1:45808742 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+14G>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003614354] | Chr1:45340205 [GRCh38] Chr1:45805877 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.30T>C (p.Arg10=) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003614558] | Chr1:45340225 [GRCh38] Chr1:45805897 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.27T>A (p.Ser9Arg) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003614594] | Chr1:45340228 [GRCh38] Chr1:45805900 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.22C>G (p.Leu8Val) | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003881978] | Chr1:45340233 [GRCh38] Chr1:45805905 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-7G>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV004011501]|Hereditary cancer-predisposing syndrome [RCV003585669] | Chr1:45340261 [GRCh38] Chr1:45805933 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.36+6C>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV003505455] | Chr1:45340213 [GRCh38] Chr1:45805885 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.913-17C>G | single nucleotide variant | not provided [RCV003665050] | Chr1:45343065 [GRCh38] Chr1:45808737 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.195+17A>G | single nucleotide variant | not provided [RCV003835986] | Chr1:45341232 [GRCh38] Chr1:45806904 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.534G>A (p.Leu178=) | single nucleotide variant | not provided [RCV003850240] | Chr1:45342425 [GRCh38] Chr1:45808097 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1158C>T (p.Ala386=) | single nucleotide variant | not provided [RCV003726554] | Chr1:45343327 [GRCh38] Chr1:45808999 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.795C>T (p.His265=) | single nucleotide variant | not provided [RCV003838700] | Chr1:45342885 [GRCh38] Chr1:45808557 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.927C>T (p.Cys309=) | single nucleotide variant | not provided [RCV003724977] | Chr1:45343096 [GRCh38] Chr1:45808768 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.236+20T>G | single nucleotide variant | not provided [RCV003723357] | Chr1:45341363 [GRCh38] Chr1:45807035 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.153C>T (p.Leu51=) | single nucleotide variant | not provided [RCV003548074] | Chr1:45341173 [GRCh38] Chr1:45806845 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1062G>A (p.Gly354=) | single nucleotide variant | not provided [RCV003559175] | Chr1:45343231 [GRCh38] Chr1:45808903 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.1035G>A (p.Arg345=) | single nucleotide variant | not provided [RCV003728640] | Chr1:45343204 [GRCh38] Chr1:45808876 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.805G>T (p.Glu269Ter) | single nucleotide variant | not provided [RCV003857513] | Chr1:45342895 [GRCh38] Chr1:45808567 [GRCh37] Chr1:1p34.1 |
pathogenic |
NM_025077.4(TOE1):c.765T>C (p.Asn255=) | single nucleotide variant | not provided [RCV003868344] | Chr1:45342855 [GRCh38] Chr1:45808527 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.199C>T (p.Leu67=) | single nucleotide variant | not provided [RCV003728906] | Chr1:45341306 [GRCh38] Chr1:45806978 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.334-11C>T | single nucleotide variant | not provided [RCV003847799] | Chr1:45341938 [GRCh38] Chr1:45807610 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.974T>C (p.Ile325Thr) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV003991896] | Chr1:45343143 [GRCh38] Chr1:45808815 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.334-5_334-3del | deletion | TOE1-related disorder [RCV003954745] | Chr1:45341944..45341946 [GRCh38] Chr1:45807616..45807618 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_001128425.2(MUTYH):c.-7GGC[1] | microsatellite | Familial adenomatous polyposis 2 [RCV004012001] | Chr1:45340256..45340258 [GRCh38] Chr1:45805928..45805930 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.20G>C (p.Arg7Pro) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV004523665] | Chr1:45340235 [GRCh38] Chr1:45805907 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-3G>C | single nucleotide variant | Familial adenomatous polyposis 2 [RCV004012082] | Chr1:45340257 [GRCh38] Chr1:45805929 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.36+1G>T | single nucleotide variant | Familial adenomatous polyposis 2 [RCV004015479] | Chr1:45340218 [GRCh38] Chr1:45805890 [GRCh37] Chr1:1p34.1 |
likely pathogenic |
NM_025077.4(TOE1):c.1421A>C (p.Asn474Thr) | single nucleotide variant | Inborn genetic diseases [RCV004475832] | Chr1:45343590 [GRCh38] Chr1:45809262 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.524C>T (p.Thr175Ile) | single nucleotide variant | Inborn genetic diseases [RCV004475834] | Chr1:45342415 [GRCh38] Chr1:45808087 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-10G>A | single nucleotide variant | Familial adenomatous polyposis 2 [RCV004016365] | Chr1:45340264 [GRCh38] Chr1:45805936 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.916T>C (p.Tyr306His) | single nucleotide variant | Inborn genetic diseases [RCV004475836] | Chr1:45343085 [GRCh38] Chr1:45808757 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.977A>C (p.Asp326Ala) | single nucleotide variant | Inborn genetic diseases [RCV004475837] | Chr1:45343146 [GRCh38] Chr1:45808818 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NC_000001.10:g.(?_45794913)_(45806113_?)dup | duplication | not specified [RCV004690875] | Chr1:45794913..45806113 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.397A>G (p.Ile133Val) | single nucleotide variant | Inborn genetic diseases [RCV004682526] | Chr1:45342012 [GRCh38] Chr1:45807684 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.-5del | deletion | Hereditary cancer-predisposing syndrome [RCV004647010] | Chr1:45340259 [GRCh38] Chr1:45805931 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_001128425.2(MUTYH):c.24G>A (p.Leu8=) | single nucleotide variant | Hereditary cancer-predisposing syndrome [RCV004647009] | Chr1:45340231 [GRCh38] Chr1:45805903 [GRCh37] Chr1:1p34.1 |
likely benign |
NM_025077.4(TOE1):c.886C>G (p.Pro296Ala) | single nucleotide variant | Inborn genetic diseases [RCV004682523] | Chr1:45342976 [GRCh38] Chr1:45808648 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.212G>A (p.Gly71Glu) | single nucleotide variant | Inborn genetic diseases [RCV004682524] | Chr1:45341319 [GRCh38] Chr1:45806991 [GRCh37] Chr1:1p34.1 |
uncertain significance |
NM_025077.4(TOE1):c.581T>A (p.Ile194Lys) | single nucleotide variant | Pontocerebellar hypoplasia type 7 [RCV004771637] | Chr1:45342472 [GRCh38] Chr1:45808144 [GRCh37] Chr1:1p34.1 |
uncertain significance |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
SGC31961 |
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RH68652 |
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RH18295 |
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TESK2 |
|
adipose tissue
|
alimentary part of gastrointestinal system
|
appendage
|
circulatory system
|
ectoderm
|
endocrine system
|
endoderm
|
entire extraembryonic component
|
exocrine system
|
hemolymphoid system
|
hepatobiliary system
|
integumental system
|
mesenchyme
|
mesoderm
|
musculoskeletal system
|
nervous system
|
pharyngeal arch
|
renal system
|
reproductive system
|
respiratory system
|
sensory system
|
visual system
|
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1204 | 2439 | 2788 | 2251 | 4972 | 1726 | 2351 | 6 | 624 | 1951 | 465 | 2269 | 7302 | 6469 | 53 | 3733 | 1 | 852 | 1744 | 1616 | 175 | 1 |
RefSeq Transcripts | NG_008189 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_025077 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005270412 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005270413 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_011540569 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_024452837 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_047443500 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_047443504 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_047443512 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054334064 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054334065 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054334066 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054334067 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_054334068 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_001736951 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_002959287 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_246230 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_426587 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_946532 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AK024011 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK093320 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK293704 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AK298162 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL359540 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AY169960 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC009364 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BI495405 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH471059 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CP068277 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CR457320 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
DA887065 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KT585032 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENST00000372090 ⟹ ENSP00000361162 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENST00000460057 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENST00000471337 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENST00000477731 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENST00000495703 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_025077 ⟹ NP_079353 | ||||||||||||||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_005270412 ⟹ XP_005270469 | ||||||||
Type: | CODING | ||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_005270413 ⟹ XP_005270470 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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||||||||||||
Sequence: |
RefSeq Acc Id: | XM_047443500 ⟹ XP_047299456 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_047443504 ⟹ XP_047299460 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_047443512 ⟹ XP_047299468 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054334064 ⟹ XP_054190039 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054334065 ⟹ XP_054190040 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054334066 ⟹ XP_054190041 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054334067 ⟹ XP_054190042 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_054334068 ⟹ XP_054190043 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_079353 | (Get FASTA) | NCBI Sequence Viewer |
XP_005270469 | (Get FASTA) | NCBI Sequence Viewer | |
XP_005270470 | (Get FASTA) | NCBI Sequence Viewer | |
XP_047299456 | (Get FASTA) | NCBI Sequence Viewer | |
XP_047299460 | (Get FASTA) | NCBI Sequence Viewer | |
XP_047299468 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054190039 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054190040 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054190041 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054190042 | (Get FASTA) | NCBI Sequence Viewer | |
XP_054190043 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH09364 | (Get FASTA) | NCBI Sequence Viewer |
AAN75441 | (Get FASTA) | NCBI Sequence Viewer | |
BAB14774 | (Get FASTA) | NCBI Sequence Viewer | |
BAG52689 | (Get FASTA) | NCBI Sequence Viewer | |
BAG57137 | (Get FASTA) | NCBI Sequence Viewer | |
BAG60435 | (Get FASTA) | NCBI Sequence Viewer | |
CAG33601 | (Get FASTA) | NCBI Sequence Viewer | |
EAX06990 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSP00000361162 | ||
ENSP00000361162.5 | |||
GenBank Protein | Q96GM8 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_079353 ⟸ NM_025077 |
- UniProtKB: | Q96GM8 (UniProtKB/Swiss-Prot), Q8IWN5 (UniProtKB/Swiss-Prot), Q6IA35 (UniProtKB/Swiss-Prot), B4DEM6 (UniProtKB/Swiss-Prot), Q9H846 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_005270469 ⟸ XM_005270412 |
- Peptide Label: | isoform X1 |
- Sequence: |
RefSeq Acc Id: | XP_005270470 ⟸ XM_005270413 |
- Peptide Label: | isoform X2 |
- Sequence: |
Ensembl Acc Id: | ENSP00000361162 ⟸ ENST00000372090 |
RefSeq Acc Id: | XP_047299468 ⟸ XM_047443512 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | XP_047299456 ⟸ XM_047443500 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_047299460 ⟸ XM_047443504 |
- Peptide Label: | isoform X4 |
- UniProtKB: | B4DP23 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_054190039 ⟸ XM_054334064 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_054190043 ⟸ XM_054334068 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | XP_054190041 ⟸ XM_054334066 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_054190042 ⟸ XM_054334067 |
- Peptide Label: | isoform X4 |
- UniProtKB: | B4DP23 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_054190040 ⟸ XM_054334065 |
- Peptide Label: | isoform X2 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q96GM8-F1-model_v2 | AlphaFold | Q96GM8 | 1-510 | view protein structure |
RGD ID: | 6855340 | ||||||||
Promoter ID: | EPDNEW_H835 | ||||||||
Type: | initiation region | ||||||||
Name: | TOE1_1 | ||||||||
Description: | target of EGR1, member 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H838 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
RGD ID: | 6855346 | ||||||||
Promoter ID: | EPDNEW_H838 | ||||||||
Type: | initiation region | ||||||||
Name: | TOE1_2 | ||||||||
Description: | target of EGR1, member 1 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Alternative Promoters: | null; see alsoEPDNEW_H835 | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
RGD ID: | 6787045 | ||||||||
Promoter ID: | HG_KWN:2484 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, K562, Lymphoblastoid, NB4 | ||||||||
Transcripts: | NM_025077, OTTHUMT00000020519, OTTHUMT00000020520, UC001CNQ.2, UC001CNR.2 | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | HGNC:15954 | AgrOrtholog |
COSMIC | TOE1 | COSMIC |
Ensembl Genes | ENSG00000132773 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Transcript | ENST00000372090 | ENTREZGENE |
ENST00000372090.6 | UniProtKB/Swiss-Prot | |
ENST00000471337 | ENTREZGENE | |
ENST00000495703 | ENTREZGENE | |
Gene3D-CATH | 3.30.420.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
6.10.250.3220 | UniProtKB/Swiss-Prot | |
GTEx | ENSG00000132773 | GTEx |
HGNC ID | HGNC:15954 | ENTREZGENE |
Human Proteome Map | TOE1 | Human Proteome Map |
InterPro | CAF1_poly(A)_ribonucleases | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
RNase_CAF1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
RNaseH-like_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
RNaseH_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_CCCH | UniProtKB/Swiss-Prot | |
KEGG Report | hsa:114034 | UniProtKB/Swiss-Prot |
NCBI Gene | 114034 | ENTREZGENE |
OMIM | 613931 | OMIM |
PANTHER | POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
TARGET OF EGR1 PROTEIN 1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | CAF1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
zf-CCCH | UniProtKB/Swiss-Prot | |
PharmGKB | PA38064 | PharmGKB |
PROSITE | ZF_C3H1 | UniProtKB/Swiss-Prot |
Superfamily-SCOP | SSF53098 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | B4DEM6 | ENTREZGENE |
B4DP23 | ENTREZGENE, UniProtKB/TrEMBL | |
Q6IA35 | ENTREZGENE | |
Q8IWN5 | ENTREZGENE | |
Q96GM8 | ENTREZGENE | |
Q9H846 | ENTREZGENE | |
TOE1_HUMAN | UniProtKB/Swiss-Prot | |
UniProt Secondary | B4DEM6 | UniProtKB/Swiss-Prot |
Q6IA35 | UniProtKB/Swiss-Prot | |
Q8IWN5 | UniProtKB/Swiss-Prot | |
Q9H846 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2017-10-04 | TOE1 | target of EGR1, exonuclease | target of EGR1, member 1 (nuclear) | Symbol and/or name change | 5135510 | APPROVED |