Alg6 (ALG6 alpha-1,3-glucosyltransferase) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Alg6 (ALG6 alpha-1,3-glucosyltransferase) Mus musculus
Analyze
Symbol: Alg6
Name: ALG6 alpha-1,3-glucosyltransferase
RGD ID: 1318804
MGI Page MGI
Description: Predicted to enable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity. Predicted to be involved in dolichol-linked oligosaccharide biosynthetic process. Predicted to be active in endoplasmic reticulum membrane. Is expressed in metanephros. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ic. Orthologous to human ALG6 (ALG6 alpha-1,3-glucosyltransferase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase); asparagine-linked glycosylation 6 homolog (yeast, alpha-1,3,-glucosyltransferase); asparagine-linked glycosylation protein 6 homolog; dol-P-Glc:Man(9)GlcNAc(2)-PP-Dol alpha-1,3-glucosyltransferase; dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase; dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase; E230028F23Rik
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39499,603,833 - 99,651,697 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl499,603,901 - 99,651,697 (+)EnsemblGRCm39 Ensembl
GRCm38499,715,596 - 99,763,460 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl499,715,664 - 99,763,460 (+)EnsemblGRCm38mm10GRCm38
MGSCv37499,382,321 - 99,430,151 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36499,207,637 - 99,255,478 (+)NCBIMGSCv36mm8
Celera498,093,710 - 98,139,735 (+)NCBICelera
Cytogenetic Map4C6NCBI
cM Map445.71NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273   PMID:14681479   PMID:16141072   PMID:16141073   PMID:16602821  
PMID:21518438   PMID:21873635   PMID:32968282   PMID:38355793  


Genomics

Comparative Map Data
Alg6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39499,603,833 - 99,651,697 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl499,603,901 - 99,651,697 (+)EnsemblGRCm39 Ensembl
GRCm38499,715,596 - 99,763,460 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl499,715,664 - 99,763,460 (+)EnsemblGRCm38mm10GRCm38
MGSCv37499,382,321 - 99,430,151 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36499,207,637 - 99,255,478 (+)NCBIMGSCv36mm8
Celera498,093,710 - 98,139,735 (+)NCBICelera
Cytogenetic Map4C6NCBI
cM Map445.71NCBI
ALG6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38163,367,627 - 63,438,553 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl163,367,575 - 63,438,553 (+)EnsemblGRCh38hg38GRCh38
GRCh37163,833,298 - 63,904,224 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36163,605,886 - 63,675,466 (+)NCBINCBI36Build 36hg18NCBI36
Build 34163,545,318 - 63,614,897NCBI
Celera162,122,929 - 62,193,888 (+)NCBICelera
Cytogenetic Map1p31.3NCBI
HuRef161,941,463 - 62,012,194 (+)NCBIHuRef
CHM1_1163,948,640 - 64,019,801 (+)NCBICHM1_1
T2T-CHM13v2.0163,243,301 - 63,314,233 (+)NCBIT2T-CHM13v2.0
Alg6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85119,520,415 - 119,606,365 (+)NCBIGRCr8
mRatBN7.25114,404,972 - 114,454,440 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5114,405,010 - 114,454,439 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5116,962,396 - 117,010,844 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05118,687,716 - 118,736,166 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05118,750,253 - 118,798,701 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05118,415,680 - 118,470,634 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5118,418,799 - 118,469,376 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05122,345,096 - 122,398,920 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45120,404,086 - 120,453,774 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15120,412,430 - 120,457,742 (+)NCBI
Celera5112,953,079 - 113,002,730 (+)NCBICelera
Cytogenetic Map5q33NCBI
Alg6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542326,569,824 - 26,592,857 (-)NCBIChiLan1.0ChiLan1.0
ALG6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21163,417,889 - 163,487,638 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11162,566,896 - 162,637,965 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0162,622,778 - 62,692,534 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1164,433,694 - 64,504,035 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl164,433,694 - 64,504,035 (+)Ensemblpanpan1.1panPan2
ALG6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1546,717,779 - 46,784,488 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl546,718,786 - 46,783,809 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha546,778,028 - 46,844,797 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0546,898,201 - 46,961,245 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl546,898,202 - 46,961,169 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1546,859,295 - 46,922,282 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0546,805,835 - 46,868,746 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0547,063,822 - 47,130,526 (-)NCBIUU_Cfam_GSD_1.0
Alg6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505876,676,868 - 76,722,886 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936692992,188 - 1,038,776 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936692992,313 - 1,038,760 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ALG6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6149,027,980 - 149,112,665 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16149,026,253 - 149,112,706 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26137,379,274 - 137,434,223 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ALG6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12069,641,678 - 69,707,338 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2069,639,106 - 69,707,347 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603347,753,731 - 47,820,742 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Alg6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474230,693,641 - 30,716,427 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474230,694,835 - 30,717,924 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:933
Count of miRNA genes:563
Interacting mature miRNAs:669
Transcripts:ENSMUST00000097961, ENSMUST00000107004, ENSMUST00000124147, ENSMUST00000137473, ENSMUST00000139799, ENSMUST00000141870, ENSMUST00000144805
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226782Tibl2_mtibia length 2, 5 week (mouse)490888237111257197Mouse
13824979Epid1_mepididymis and vas deferens weight 1 (mouse)48988823799857197Mouse
13824982Svwq1_mseminal vesicle weight QTL 1 (mouse)489888237118857197Mouse
11532714Sluc43_msusceptibility to lung cancer 43 (mouse)446642108123127211Mouse
13506251Cytrq1_mcytokine response QTL 1 (mouse)46571808699718086Mouse
12904002Opfaq9_mopen field activity QTL 9 (mouse)492975790126975790Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined88982069140468203Mouse
1357726Lnopy1_mlens opacity 1 (mouse)Not determined485428838119429037Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465718237146584457Mouse
11532708Sluc43i_msusceptibility to lung cancer 43i (mouse)474444699108444983Mouse
11532707Sluc43h_msusceptibility to lung cancer 43h (mouse)474444699108444983Mouse
27226770Tibl11_mtibia length 11, 10 week (mouse)488518237108357197Mouse
11532706Sluc43c_msusceptibility to lung cancer 43c (mouse)474444699108444983Mouse
11532705Sluc43b_msusceptibility to lung cancer 43b (mouse)474444699108444983Mouse
1302044Nss1_mNOD Sjogren's syndrome 1 (mouse)Not determined471982069105982216Mouse
11532704Sluc43a_msusceptibility to lung cancer 43a (mouse)474444699108444983Mouse
14696687Gdq1_mgrooming duration QTL 1, males (mouse)496888237111857197Mouse
27226766Tibl17_mtibia length 17, 16 week (mouse)488518237108457197Mouse
27226760Feml19_mfemur length 19, 16 week (mouse)490888237108457197Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined88982069140468203Mouse
1302031Bulb1_mbulb size 1 (mouse)Not determined474033887108034029Mouse
27095939Ulnl9_mulna length 9, 16 week (mouse)465318237118857197Mouse
12904933Edlmmq3_mextensor digitorum longus muscle mass QTL 3 (mouse)481213991115213991Mouse
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156268235Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined494957579150676858Mouse
1300918Stheal4_msoft tissue heal 4 (mouse)Not determined489969627123969747Mouse
1301556Cd4vts1_mCD4 virgin T cell subset 1 (mouse)Not determined485428838119429037Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined488982069151654550Mouse
26884406Huml3_mhumerus length 3, 10 week (mouse)475618237100157197Mouse
27226801Feml6_mfemur length 6, 5 week (mouse)487518237103257197Mouse
1302204Spm1_msplenomegaly modifier (mouse)Not determined482244395116244582Mouse
11532703Sluc43g_msusceptibility to lung cancer 43g (mouse)474444699108444983Mouse
11532702Sluc43f_msusceptibility to lung cancer 43f (mouse)474444699108444983Mouse
11532701Sluc43e_msusceptibility to lung cancer 43e (mouse)474444699108444983Mouse
1558948Ath8_matherosclerosis 8 (mouse)Not determined445658442105156995Mouse
11532700Sluc43d_msusceptibility to lung cancer 43d (mouse)474444699108444983Mouse
11039517Ltpr4_mLeishmania tropica response 4 (mouse)479365751113365867Mouse
11039504Ltpr4a_mLeishmania tropica response 4a (mouse)479365751113365867Mouse
1301930Papg1_mpulmonary adenoma progression 1 (mouse)Not determined485781167119781279Mouse
11039505Ltpr4c_mLeishmania tropica response 4c (mouse)479365751113365867Mouse
1301545Gauc_mglucose area under curve (mouse)Not determined476763107110763305Mouse
1302057Pgia27_mproteoglycan induced arthritis 27 (mouse)Not determined470067227104067464Mouse
11039506Ltpr4b_mLeishmania tropica response 4b (mouse)479365751113365867Mouse
13208562Wght7_mweight 7 (mouse)490888237148084457Mouse
27226787Feml14_mfemur length 14, 10 week (mouse)484918237107157197Mouse
10412193Plep_mplasma lepin levels (mouse)Not determined474444699108444983Mouse
27095900Scvln9_msacral vertebrae length 2, 10 week (mouse)468018237107157197Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)488982069140468203Mouse
27226716Metcl2_mmetatarsal-calcaneal length 2, 5 week (mouse)488118237118557197Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468018237150884457Mouse
26884434Zlq1_mzygomatic length QTL 1, 5 week (mouse)453700000103257197Mouse
26884435Zlq4_mzygomatic length QTL 4, 10 week (mouse)485118237104957197Mouse
1300697Sle2_msystemic lupus erythmatosus susceptibility 2 (mouse)Not determined477957579111957775Mouse
1301597Anxty_manxiety (mouse)Not determined474137574128009280Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155684457Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined88982069140468203Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138342753Mouse
26884431Zlq8_mzygomatic length QTL 8, 16 week (mouse)474718237108357197Mouse
12879897Berr4_mberghei resistance locus 4 (mouse)471982069105982216Mouse
4142047Mvwf3_mmodifier of von Willebrand factor 3 (mouse)Not determined14010457117072206Mouse
1301233Sbw2_msplenomegaly-NZB x NZW 2 (mouse)Not determined494957579128009280Mouse
27226746Metcl8_mmetatarsal-calcaneal length 8, 10 week (mouse)487518237107157197Mouse
27095924Pglq2_mpelvic girdle length QTL 2, 5 week (mouse)469118237130727311Mouse
27095927Pglq7_mpelvic girdle length QTL 7, 10 week (mouse)488118237108357197Mouse
27226739Metcl14_mmetatarsal-calcaneal length 14, 16 week (mouse)487518237108357197Mouse
27095921Pglq12_mpelvic girdle length QTL 12, 16 week (mouse)483118237108357197Mouse
1357561Mbsyd_mmetabolic syndrome (mouse)Not determined466888445100888588Mouse
1301118Bbaa23_mB.burgdorferi-associated arthritis 23 (mouse)Not determined485781167119781279Mouse
15039368Nmrs19_mNAFLD-associated magnetic resonance shift 19 (mouse)490882780124882780Mouse
11532738Abd1_mautoimmune biliary disease 1 (mouse)488982069116271120Mouse
1301757Tlsr4_mthymic lymphoma suppressor region 4 (mouse)Not determined466757130100757258Mouse
1301731Cafq2_mcaffeine metabolism QTL 2 (mouse)Not determined494732255128732454Mouse
27095917Scvln14_msacral vertebrae length 2, 16 week (mouse)468018237130277062Mouse
4141900Skts-fp1_mskin tumor susceptibility in FVB and PWK 1 (mouse)Not determined453550839124055180Mouse
1300966Pabr2_mplasma apolipoprotein B (human) regulator 2 (mouse)Not determined446332646105801860Mouse
1300580Lbw2_mlupus NZB x NZW 2 (mouse)Not determined498545539128009280Mouse
1301739Pitm2_mprion incubation time 2 (mouse)Not determined471982069105982216Mouse
1301867Idd11_minsulin dependent diabetes susceptibility 11 (mouse)Not determined483604870117605006Mouse
27226724Tibw2_mtibia width 2, proximal, 10 week (mouse)443000000108357197Mouse
26884449Sklq2_mskull length QTL 2, 5 week (mouse)436700000128993793Mouse
27095905Scvln3_msacral vertebrae length 2, 5 week (mouse)455600000128993793Mouse
11553870Cmmm_mcarcinoma modifier of MSM (mouse)490590668124590781Mouse

Markers in Region
Alg6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4C6UniSTS
cM Map445.71UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006503164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK036792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC044875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC080867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX005053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000097961   ⟹   ENSMUSP00000095574
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl499,603,902 - 99,651,697 (+)Ensembl
GRCm38.p6 Ensembl499,715,665 - 99,763,460 (+)Ensembl
Ensembl Acc Id: ENSMUST00000107004   ⟹   ENSMUSP00000102617
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl499,603,913 - 99,641,122 (+)Ensembl
GRCm38.p6 Ensembl499,715,676 - 99,752,885 (+)Ensembl
Ensembl Acc Id: ENSMUST00000124147
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl499,607,389 - 99,627,710 (+)Ensembl
GRCm38.p6 Ensembl499,719,152 - 99,739,473 (+)Ensembl
Ensembl Acc Id: ENSMUST00000137473
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl499,603,901 - 99,618,460 (+)Ensembl
GRCm38.p6 Ensembl499,715,664 - 99,730,223 (+)Ensembl
Ensembl Acc Id: ENSMUST00000139799   ⟹   ENSMUSP00000121980
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl499,603,913 - 99,641,313 (+)Ensembl
GRCm38.p6 Ensembl499,715,676 - 99,753,076 (+)Ensembl
Ensembl Acc Id: ENSMUST00000141870
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl499,603,913 - 99,634,621 (+)Ensembl
GRCm38.p6 Ensembl499,715,676 - 99,746,384 (+)Ensembl
Ensembl Acc Id: ENSMUST00000144805
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl499,603,902 - 99,650,548 (+)Ensembl
GRCm38.p6 Ensembl499,715,665 - 99,762,311 (+)Ensembl
RefSeq Acc Id: NM_001081264   ⟹   NP_001074733
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,867 - 99,651,697 (+)NCBI
GRCm38499,715,630 - 99,763,460 (+)NCBI
MGSCv37499,382,321 - 99,430,151 (+)RGD
Celera498,093,710 - 98,139,735 (+)RGD
cM Map4 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006503155   ⟹   XP_006503218
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,836 - 99,651,695 (+)NCBI
GRCm38499,715,599 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006503156   ⟹   XP_006503219
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,836 - 99,651,695 (+)NCBI
GRCm38499,715,599 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006503158   ⟹   XP_006503221
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,833 - 99,651,695 (+)NCBI
GRCm38499,715,596 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006503160   ⟹   XP_006503223
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,615,100 - 99,651,695 (+)NCBI
GRCm38499,726,863 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006503161   ⟹   XP_006503224
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,833 - 99,651,695 (+)NCBI
GRCm38499,715,596 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006503162   ⟹   XP_006503225
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,836 - 99,651,695 (+)NCBI
GRCm38499,715,599 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006503163   ⟹   XP_006503226
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,627,452 - 99,651,695 (+)NCBI
GRCm38499,739,229 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006503164   ⟹   XP_006503227
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,836 - 99,651,695 (+)NCBI
GRCm38499,715,599 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320257   ⟹   XP_017175746
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,836 - 99,651,695 (+)NCBI
GRCm38499,715,599 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030253605   ⟹   XP_030109465
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,836 - 99,651,695 (+)NCBI
GRCm38499,715,599 - 99,763,458 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164185   ⟹   XP_036020078
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39499,603,833 - 99,641,324 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001074733   ⟸   NM_001081264
- Peptide Label: precursor
- UniProtKB: Q3TZF4 (UniProtKB/Swiss-Prot),   Q3TAE8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006503221   ⟸   XM_006503158
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006503224   ⟸   XM_006503161
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006503218   ⟸   XM_006503155
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006503219   ⟸   XM_006503156
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006503225   ⟸   XM_006503162
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_006503227   ⟸   XM_006503164
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_006503223   ⟸   XM_006503160
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006503226   ⟸   XM_006503163
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_017175746   ⟸   XM_017320257
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_030109465   ⟸   XM_030253605
- Peptide Label: isoform X4
Ensembl Acc Id: ENSMUSP00000121980   ⟸   ENSMUST00000139799
Ensembl Acc Id: ENSMUSP00000102617   ⟸   ENSMUST00000107004
Ensembl Acc Id: ENSMUSP00000095574   ⟸   ENSMUST00000097961
RefSeq Acc Id: XP_036020078   ⟸   XM_036164185
- Peptide Label: isoform X6

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3TAE8-F1-model_v2 AlphaFold Q3TAE8 1-507 view protein structure

Promoters
RGD ID:6834861
Promoter ID:MM_KWN:38618
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000107003,   ENSMUST00000107005,   ENSMUST00000107006,   ENSMUST00000107007,   NM_001081264,   OTTMUST00000018090,   OTTMUST00000018093,   OTTMUST00000018094,   OTTMUST00000072197
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36499,382,031 - 99,382,697 (+)MPROMDB
RGD ID:6883936
Promoter ID:EPDNEW_M5419
Type:initiation region
Name:Alg6_1
Description:Mus musculus asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase), mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38499,715,673 - 99,715,733EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2444031 AgrOrtholog
Ensembl Genes ENSMUSG00000073792 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000097961 ENTREZGENE
  ENSMUST00000097961.9 UniProtKB/Swiss-Prot
  ENSMUST00000107004.9 UniProtKB/TrEMBL
  ENSMUST00000139799.3 UniProtKB/TrEMBL
InterPro Glyco_trans_ALG6/ALG8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:320438 UniProtKB/Swiss-Prot
MGD MGI:2444031 ENTREZGENE
NCBI Gene 320438 ENTREZGENE
PANTHER PTHR12413 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12413:SF1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Alg6_Alg8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Alg6 PhenoGen
UniProt A2BDX8_MOUSE UniProtKB/TrEMBL
  A2BDY0_MOUSE UniProtKB/TrEMBL
  ALG6_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TZF4 ENTREZGENE
UniProt Secondary Q3TZF4 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-07-04 Alg6  ALG6 alpha-1,3-glucosyltransferase  Alg6  asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)  Symbol and/or name change 5135510 APPROVED
2012-07-10 Alg6  asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)  Alg6  asparagine-linked glycosylation 6 homolog (yeast, alpha-1,3,-glucosyltransferase)  Symbol and/or name change 5135510 APPROVED