Ap5m1 (adaptor-related protein complex 5, mu 1 subunit) - Rat Genome Database

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Gene: Ap5m1 (adaptor-related protein complex 5, mu 1 subunit) Mus musculus
Analyze
Symbol: Ap5m1
Name: adaptor-related protein complex 5, mu 1 subunit
RGD ID: 1317657
MGI Page MGI
Description: Predicted to be involved in endosomal transport. Predicted to be located in membrane. Predicted to be part of AP-type membrane coat adaptor complex. Predicted to be active in cytosol; late endosome; and lysosome. Orthologous to human AP5M1 (adaptor related protein complex 5 subunit mu 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4932432K03Rik; adapter-related protein complex 5 mu subunit; adapter-related protein complex 5 subunit mu-1; adaptor-related protein complex 5 subunit mu-1; AP-5 complex subunit mu-1; MHD domain-containing death-inducing protein; mu-2-related death-inducing protein; MU-2/AP1M2 domain containing, death-inducing; Mu5; muD; Muden; Mudeng
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391449,303,869 - 49,331,681 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1449,303,554 - 49,331,691 (+)EnsemblGRCm39 Ensembl
GRCm381449,066,408 - 49,094,114 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1449,066,097 - 49,094,234 (+)EnsemblGRCm38mm10GRCm38
MGSCv371449,686,170 - 49,707,398 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361447,988,500 - 48,009,674 (+)NCBIMGSCv36mm8
Celera1445,267,199 - 45,288,655 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1425.36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ap5m1Mouserenal cell carcinoma  ISOAP5M1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:23797736

1 to 20 of 44 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ap5m1Mouse1,2-dimethylhydrazine decreases expressionEXP 64804641 and 2-Dimethylhydrazine results in decreased expression of AP5M1 mRNACTDPMID:22206623
Ap5m1Mouse17beta-estradiol multiple interactionsISOAP5M1 (Homo sapiens)6480464[Estradiol co-treated with Progesterone] results in decreased expression of AP5M1 mRNACTDPMID:21453500
Ap5m1Mouse17beta-estradiol decreases expressionISOAP5M1 (Homo sapiens)6480464Estradiol results in decreased expression of AP5M1 mRNACTDPMID:21453500
Ap5m1Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of AP5M1 mRNACTDPMID:24680724
Ap5m1Mouse3,4-methylenedioxymethamphetamine decreases expressionEXP 6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in decreased expression of AP5M1 mRNACTDPMID:26251327
Ap5m1Mouseacrylamide increases expressionISOAP5M1 (Homo sapiens)6480464Acrylamide results in increased expression of AP5M1 mRNACTDPMID:32763439
Ap5m1Mouseantirheumatic drug decreases expressionISOAP5M1 (Homo sapiens)6480464Antirheumatic Agents results in decreased expression of AP5M1 mRNACTDPMID:24449571
Ap5m1Mouseatrazine decreases expressionISOAP5M1 (Homo sapiens)6480464Atrazine results in decreased expression of AP5M1 mRNACTDPMID:22378314
Ap5m1Mousebelinostat increases expressionISOAP5M1 (Homo sapiens)6480464belinostat results in increased expression of AP5M1 mRNACTDPMID:26272509
Ap5m1Mousebenzo[a]pyrene diol epoxide I decreases expressionISOAP5M1 (Homo sapiens)64804647 more ...CTDPMID:20018196
Ap5m1Mousebisphenol A decreases expressionISOAp5m1 (Rattus norvegicus)6480464bisphenol A results in decreased expression of AP5M1 mRNACTDPMID:25181051 and PMID:34947998
Ap5m1Mousebisphenol A increases expressionISOAp5m1 (Rattus norvegicus)6480464bisphenol A results in increased expression of AP5M1 mRNACTDPMID:27571134
Ap5m1Mousecocaine affects expressionISOAp5m1 (Rattus norvegicus)6480464Cocaine affects the expression of AP5M1 mRNACTDPMID:20187946
Ap5m1Mousecrocidolite asbestos decreases expressionISOAP5M1 (Homo sapiens)6480464Asbestos and Crocidolite results in decreased expression of AP5M1 mRNACTDPMID:29523930
Ap5m1Mousecrocidolite asbestos decreases expressionEXP 6480464Asbestos and Crocidolite results in decreased expression of AP5M1 mRNACTDPMID:29279043
Ap5m1Mousecyclosporin A decreases expressionISOAP5M1 (Homo sapiens)6480464Cyclosporine results in decreased expression of AP5M1 mRNACTDPMID:25562108
Ap5m1Mousedibutyl phthalate increases expressionEXP 6480464Dibutyl Phthalate results in increased expression of AP5M1 mRNACTDPMID:21266533
Ap5m1Mousedicrotophos decreases expressionISOAP5M1 (Homo sapiens)6480464dicrotophos results in decreased expression of AP5M1 mRNACTDPMID:28302478
Ap5m1Mousedorsomorphin multiple interactionsISOAP5M1 (Homo sapiens)6480464[NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in decreased expression of AP5M1 mRNACTDPMID:27188386
Ap5m1Mousefolic acid decreases expressionEXP 6480464Folic Acid results in decreased expression of AP5M1 mRNACTDPMID:25629700

1 to 20 of 44 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ap5m1Mouseendosomal transport involved_inISOUniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000119
Ap5m1Mouseendosomal transport involved_inIBAPANTHER:PTN002699615 and UniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000033
Ap5m1Mouseendosomal transport involved_inISSUniProtKB:Q9H0R12290270 UniProtGO_REF:0000024
Ap5m1Mouseprotein transport involved_inIEAUniProtKB-KW:KW-06532290270 UniProtGO_REF:0000043
Ap5m1Mousevesicle-mediated transport involved_inNAS 2290270 PMID:22022230ComplexPortalPMID:22022230

Cellular Component
1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ap5m1MouseAP-5 adaptor complex part_ofNAS 2290270 PMID:22022230ComplexPortalPMID:22022230
Ap5m1MouseAP-type membrane coat adaptor complex part_ofISOUniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000119
Ap5m1MouseAP-type membrane coat adaptor complex part_ofIBAPANTHER:PTN002699615 and UniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000033
Ap5m1MouseAP-type membrane coat adaptor complex part_ofISSUniProtKB:Q9H0R12290270 UniProtGO_REF:0000024
Ap5m1Mousecytosol located_inISOUniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000119
Ap5m1Mousecytosol is_active_inIBAPANTHER:PTN002699615 and UniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000033
Ap5m1Mousecytosol located_inISSUniProtKB:Q9H0R12290270 UniProtGO_REF:0000024
Ap5m1Mouselate endosome located_inISSUniProtKB:Q9H0R12290270 UniProtGO_REF:0000024
Ap5m1Mouselate endosome located_inISOUniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000119
Ap5m1Mouselate endosome is_active_inIBAPANTHER:PTN002699615 and UniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000033
Ap5m1Mouselate endosome located_inNAS 2290270 PMID:22022230ComplexPortalPMID:22022230
Ap5m1Mouselate endosome membrane located_inIEAUniProtKB-SubCell:SL-01512290270 UniProtGO_REF:0000044
Ap5m1Mouselysosomal membrane located_inIEAUniProtKB-SubCell:SL-01572290270 UniProtGO_REF:0000044
Ap5m1Mouselysosome located_inISSUniProtKB:Q9H0R12290270 UniProtGO_REF:0000024
Ap5m1Mouselysosome is_active_inIBAPANTHER:PTN002699615 and UniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000033
Ap5m1Mouselysosome located_inISOUniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000119
Ap5m1Mousemembrane located_inISSUniProtKB:Q9H0R12290270 UniProtGO_REF:0000024
Ap5m1Mousemembrane located_inISOUniProtKB:Q9H0R12290270 GO_CentralGO_REF:0000119
1 to 18 of 18 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ap5m1Mouseprotein binding enablesISOUniProtKB:Q2VPB79068941 PMID:22022230IntActPMID:22022230


#
Reference Title
Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18395520   PMID:18799693  
PMID:21267068   PMID:21873635   PMID:22022230   PMID:32325033   PMID:38355793  



Ap5m1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391449,303,869 - 49,331,681 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1449,303,554 - 49,331,691 (+)EnsemblGRCm39 Ensembl
GRCm381449,066,408 - 49,094,114 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1449,066,097 - 49,094,234 (+)EnsemblGRCm38mm10GRCm38
MGSCv371449,686,170 - 49,707,398 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361447,988,500 - 48,009,674 (+)NCBIMGSCv36mm8
Celera1445,267,199 - 45,288,655 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1425.36NCBI
AP5M1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381457,268,971 - 57,298,742 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1457,268,924 - 57,298,742 (+)EnsemblGRCh38hg38GRCh38
GRCh371457,735,689 - 57,765,460 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361456,805,380 - 56,826,545 (+)NCBINCBI36Build 36hg18NCBI36
Build 341456,805,379 - 56,826,544NCBI
Celera1437,785,692 - 37,806,883 (+)NCBICelera
Cytogenetic Map14q22.3NCBI
HuRef1437,900,404 - 37,921,545 (+)NCBIHuRef
CHM1_11457,674,243 - 57,695,425 (+)NCBICHM1_1
T2T-CHM13v2.01451,475,418 - 51,505,190 (+)NCBIT2T-CHM13v2.0
Ap5m1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81524,835,122 - 24,864,854 (+)NCBIGRCr8
mRatBN7.21522,355,478 - 22,385,222 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1522,355,500 - 22,377,750 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1525,130,663 - 25,152,869 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01526,094,128 - 26,116,390 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01524,339,159 - 24,361,378 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01525,933,483 - 25,955,745 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1525,933,483 - 25,955,745 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01529,856,055 - 29,883,540 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41525,053,279 - 25,075,541 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11525,069,198 - 25,089,945 (+)NCBI
Celera1522,732,365 - 22,754,616 (+)NCBICelera
Cytogenetic Map15p14NCBI
Ap5m1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546611,191,511 - 11,209,388 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546611,191,511 - 11,216,274 (+)NCBIChiLan1.0ChiLan1.0
AP5M1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21558,375,435 - 58,396,912 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11457,592,297 - 57,622,094 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01437,839,766 - 37,869,926 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11456,110,452 - 56,131,921 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1456,110,452 - 56,131,921 (+)Ensemblpanpan1.1panPan2
LOC100685159
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1479,914,436 - 79,982,053 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl832,848,205 - 32,902,815 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha479,620,787 - 79,622,854 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0480,582,419 - 80,584,487 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1480,256,587 - 80,258,655 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0480,376,999 - 80,379,067 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0480,940,052 - 80,942,120 (+)NCBIUU_Cfam_GSD_1.0
Ap5m1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864072,274,015 - 72,329,014 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049364951,862,790 - 1,900,955 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AP5M1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1186,430,227 - 186,461,319 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11186,430,154 - 186,464,347 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21207,004,493 - 207,027,562 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AP5M1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12434,449,826 - 34,472,141 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2434,450,227 - 34,473,732 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605322,672,737 - 22,694,997 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ap5m1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248842,311,873 - 2,332,170 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248842,311,570 - 2,333,436 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Ap5m1
930 total Variants

Predicted Target Of
Summary Value
Count of predictions:331
Count of miRNA genes:261
Interacting mature miRNAs:283
Transcripts:ENSMUST00000037473
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 22 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse

1 to 10 of 22 rows
UniSTS:237175  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381449,087,348 - 49,087,556UniSTSGRCm38
MGSCv371449,707,023 - 49,707,231UniSTSGRCm37
Celera1445,288,279 - 45,288,487UniSTS
Cytogenetic Map14C1UniSTS






1 to 30 of 30 rows
RefSeq Transcripts NM_001360070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_144535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006519626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011245212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003950905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC118539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK016540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 30 rows

Ensembl Acc Id: ENSMUST00000037473   ⟹   ENSMUSP00000046536
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1449,303,952 - 49,328,336 (+)Ensembl
GRCm38.p6 Ensembl1449,066,495 - 49,090,879 (+)Ensembl
Ensembl Acc Id: ENSMUST00000226695   ⟹   ENSMUSP00000154575
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1449,321,314 - 49,331,691 (+)Ensembl
GRCm38.p6 Ensembl1449,083,857 - 49,094,234 (+)Ensembl
Ensembl Acc Id: ENSMUST00000227066   ⟹   ENSMUSP00000153926
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1449,318,462 - 49,328,255 (+)Ensembl
GRCm38.p6 Ensembl1449,081,005 - 49,090,798 (+)Ensembl
Ensembl Acc Id: ENSMUST00000227410   ⟹   ENSMUSP00000154044
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1449,303,988 - 49,324,822 (+)Ensembl
GRCm38.p6 Ensembl1449,066,531 - 49,087,365 (+)Ensembl
Ensembl Acc Id: ENSMUST00000227431   ⟹   ENSMUSP00000153761
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1449,303,554 - 49,320,267 (+)Ensembl
GRCm38.p6 Ensembl1449,066,097 - 49,082,810 (+)Ensembl
Ensembl Acc Id: ENSMUST00000227608   ⟹   ENSMUSP00000154035
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1449,303,999 - 49,324,876 (+)Ensembl
GRCm38.p6 Ensembl1449,066,542 - 49,087,419 (+)Ensembl
Ensembl Acc Id: ENSMUST00000227991   ⟹   ENSMUSP00000154211
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1449,311,450 - 49,318,516 (+)Ensembl
GRCm38.p6 Ensembl1449,073,993 - 49,081,059 (+)Ensembl
Ensembl Acc Id: ENSMUST00000228238   ⟹   ENSMUSP00000154186
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1449,303,953 - 49,314,150 (+)Ensembl
GRCm38.p6 Ensembl1449,066,496 - 49,076,693 (+)Ensembl
RefSeq Acc Id: NM_001360070   ⟹   NP_001346999
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,304,006 - 49,328,197 (+)NCBI
GRCm381449,066,549 - 49,090,740 (+)NCBI
Sequence:
RefSeq Acc Id: NM_144535   ⟹   NP_653118
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,304,006 - 49,325,180 (+)NCBI
GRCm381449,066,549 - 49,087,723 (+)NCBI
MGSCv371449,686,170 - 49,707,398 (+)RGD
Celera1445,267,199 - 45,288,655 (+)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006519623   ⟹   XP_006519686
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,303,869 - 49,328,336 (+)NCBI
GRCm381449,066,408 - 49,090,879 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519624   ⟹   XP_006519687
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,304,012 - 49,328,264 (+)NCBI
GRCm381449,066,609 - 49,090,807 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006519626   ⟹   XP_006519689
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,303,889 - 49,328,264 (+)NCBI
GRCm381449,066,662 - 49,090,807 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011245212   ⟹   XP_011243514
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,303,869 - 49,331,681 (+)NCBI
GRCm381449,066,408 - 49,094,114 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158881   ⟹   XP_036014774
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,303,955 - 49,328,336 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036158882   ⟹   XP_036014775
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,304,021 - 49,328,336 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003950905
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391449,303,869 - 49,328,264 (+)NCBI
GRCm381449,066,408 - 49,086,466 (+)NCBI
Sequence:
1 to 5 of 16 rows
1 to 5 of 16 rows
RefSeq Acc Id: NP_653118   ⟸   NM_144535
- UniProtKB: Q8R5B1 (UniProtKB/Swiss-Prot),   Q8BY11 (UniProtKB/Swiss-Prot),   Q8BJ58 (UniProtKB/Swiss-Prot),   Q8BJ31 (UniProtKB/Swiss-Prot),   Q8BII2 (UniProtKB/Swiss-Prot),   Q3TPT5 (UniProtKB/Swiss-Prot),   Q3TDF2 (UniProtKB/Swiss-Prot),   Q8BJ63 (UniProtKB/Swiss-Prot),   A0A0R4J0K9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006519686   ⟸   XM_006519623
- Peptide Label: isoform X1
- UniProtKB: Q8R5B1 (UniProtKB/Swiss-Prot),   Q8BY11 (UniProtKB/Swiss-Prot),   Q8BJ58 (UniProtKB/Swiss-Prot),   Q8BJ31 (UniProtKB/Swiss-Prot),   Q8BII2 (UniProtKB/Swiss-Prot),   Q3TPT5 (UniProtKB/Swiss-Prot),   Q3TDF2 (UniProtKB/Swiss-Prot),   Q8BJ63 (UniProtKB/Swiss-Prot),   A0A0R4J0K9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006519687   ⟸   XM_006519624
- Peptide Label: isoform X2
- UniProtKB: Q8R5B1 (UniProtKB/Swiss-Prot),   Q8BY11 (UniProtKB/Swiss-Prot),   Q8BJ63 (UniProtKB/Swiss-Prot),   Q8BJ58 (UniProtKB/Swiss-Prot),   Q8BJ31 (UniProtKB/Swiss-Prot),   Q8BII2 (UniProtKB/Swiss-Prot),   Q3TPT5 (UniProtKB/Swiss-Prot),   Q3TDF2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006519689   ⟸   XM_006519626
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011243514   ⟸   XM_011245212
- Peptide Label: isoform X1
- UniProtKB: Q8R5B1 (UniProtKB/Swiss-Prot),   Q8BY11 (UniProtKB/Swiss-Prot),   Q8BJ58 (UniProtKB/Swiss-Prot),   Q8BJ31 (UniProtKB/Swiss-Prot),   Q8BII2 (UniProtKB/Swiss-Prot),   Q3TPT5 (UniProtKB/Swiss-Prot),   Q3TDF2 (UniProtKB/Swiss-Prot),   Q8BJ63 (UniProtKB/Swiss-Prot),   A0A0R4J0K9 (UniProtKB/TrEMBL)
- Sequence:
MHD

Name Modeler Protein Id AA Range Protein Structure
AF-Q8BJ63-F1-model_v2 AlphaFold Q8BJ63 1-490 view protein structure

RGD ID:8682098
Promoter ID:EPDNEW_M19080
Type:initiation region
Name:Ap5m1_1
Description:Mus musculus adaptor-related protein complex 5, mu 1 subunit, transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381449,066,549 - 49,066,609EPDNEW
RGD ID:6825208
Promoter ID:MM_KWN:16513
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3,   3T3L1_Day4,   Brain,   MEF_B6
Transcripts:NM_144535,   UC007TJX.1,   UC007TJY.1,   UC007TKA.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361449,686,116 - 49,686,616 (+)MPROMDB


1 to 39 of 39 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000036291 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000037473 ENTREZGENE
  ENSMUST00000228238.2 UniProtKB/Swiss-Prot
Gene3D-CATH Mu homology domain, subdomain B UniProtKB/Swiss-Prot
InterPro AP2_Mu_C_sf UniProtKB/Swiss-Prot
  AP5M1 UniProtKB/Swiss-Prot
  MHD UniProtKB/Swiss-Prot
KEGG Report mmu:74385 UniProtKB/Swiss-Prot
MGD MGI:1921635 ENTREZGENE
NCBI Gene 74385 ENTREZGENE
PANTHER AP-5 COMPLEX SUBUNIT MU-1 UniProtKB/Swiss-Prot
  PTHR16082 UniProtKB/Swiss-Prot
Pfam Adap_comp_sub UniProtKB/Swiss-Prot
PhenoGen Ap5m1 PhenoGen
PROSITE MHD UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49447 UniProtKB/Swiss-Prot
UniProt A0A0R4J0K9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2I3BPF2_MOUSE UniProtKB/TrEMBL
  A0A2I3BPU8_MOUSE UniProtKB/TrEMBL
  A0A2I3BQ42_MOUSE UniProtKB/TrEMBL
  A0A2I3BQF1_MOUSE UniProtKB/TrEMBL
  A0A2I3BQK6_MOUSE UniProtKB/TrEMBL
  A0A2I3BRQ4_MOUSE UniProtKB/TrEMBL
  AP5M1_MOUSE UniProtKB/Swiss-Prot
  Q3TDF2 ENTREZGENE
  Q3TPT5 ENTREZGENE
  Q8BII2 ENTREZGENE
  Q8BJ31 ENTREZGENE
  Q8BJ58 ENTREZGENE
  Q8BJ63 ENTREZGENE
  Q8BY11 ENTREZGENE
  Q8R5B1 ENTREZGENE
UniProt Secondary Q3TDF2 UniProtKB/Swiss-Prot
  Q3TPT5 UniProtKB/Swiss-Prot
  Q8BII2 UniProtKB/Swiss-Prot
  Q8BJ31 UniProtKB/Swiss-Prot
  Q8BJ58 UniProtKB/Swiss-Prot
  Q8BY11 UniProtKB/Swiss-Prot
  Q8R5B1 UniProtKB/Swiss-Prot
1 to 39 of 39 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-11-27 Ap5m1  adaptor-related protein complex 5, mu 1 subunit  Mudeng  MU-2/AP1M2 domain containing, death-inducing  Symbol and/or name change 5135510 APPROVED