Extl2 (exostosin-like glycosyltransferase 2) - Rat Genome Database

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Gene: Extl2 (exostosin-like glycosyltransferase 2) Mus musculus
Analyze
Symbol: Extl2
Name: exostosin-like glycosyltransferase 2
RGD ID: 1317016
MGI Page MGI
Description: Enables acetylgalactosaminyltransferase activity; glycosaminoglycan binding activity; and manganese ion binding activity. Involved in N-acetylglucosamine metabolic process and UDP-N-acetylgalactosamine metabolic process. Predicted to be located in cytosol; endoplasmic reticulum; and nucleoplasm. Is expressed in several structures, including central nervous system; genitourinary system; liver; lung; and spleen. Orthologous to human EXTL2 (exostosin like glycosyltransferase 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 3000001D04Rik; alpha-1,4-N-acetylhexosaminyltransferase EXTL2; alpha-GalNAcT EXTL2; AW146439; exostoses (multiple)-like 2; exostoses-like 2; exostosin-like 2; exotoses (multiple)-like 2; EXT-related protein 2; glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393115,801,083 - 115,822,666 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3115,801,111 - 115,822,666 (+)EnsemblGRCm39 Ensembl
GRCm383116,007,449 - 116,029,017 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3116,007,462 - 116,029,017 (+)EnsemblGRCm38mm10GRCm38
MGSCv373115,710,367 - 115,731,934 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363115,999,481 - 116,020,876 (+)NCBIMGSCv36mm8
Celera3122,431,903 - 122,453,472 (+)NCBICelera
Cytogenetic Map3G1NCBI
cM Map350.17NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Extl2Mousemaple syrup urine disease  ISORGD:13170158554872ClinVar Annotator: match by term: Maple syrup urine diseaseClinVarPMID:28492532

1 to 20 of 54 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Extl2Mouse(+)-schisandrin B multiple interactionsISORGD:13076846480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of EXTL2 mRNA]CTDPMID:31150632
Extl2Mouse1,2-dimethylhydrazine multiple interactionsEXP 6480464[1,2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of EXTL2 mRNACTDPMID:22206623
Extl2Mouse1,2-dimethylhydrazine decreases expressionEXP 64804641,2-Dimethylhydrazine results in decreased expression of EXTL2 mRNACTDPMID:22206623
Extl2Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of EXTL2 mRNACTDPMID:21570461
Extl2Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:13076846480464Tetrachlorodibenzodioxin results in decreased expression of EXTL2 mRNACTDPMID:33387578
Extl2Mouse2-methylcholine affects expressionISORGD:13170156480464beta-methylcholine affects the expression of EXTL2 mRNACTDPMID:21179406
Extl2Mouse3,4-methylenedioxymethamphetamine decreases expressionEXP 6480464N-Methyl-3,4-methylenedioxyamphetamine results in decreased expression of EXTL2 mRNACTDPMID:26251327
Extl2Mouse4-hydroxyphenyl retinamide decreases expressionEXP 6480464Fenretinide results in decreased expression of EXTL2 mRNACTDPMID:28973697
Extl2Mouseaflatoxin B1 increases expressionISORGD:13170156480464Aflatoxin B1 results in increased expression of EXTL2 mRNACTDPMID:22100608
Extl2Mouseaflatoxin B1 decreases methylationISORGD:13170156480464Aflatoxin B1 results in decreased methylation of EXTL2 geneCTDPMID:27153756
Extl2Mouseall-trans-retinoic acid increases expressionISORGD:13170156480464Tretinoin results in increased expression of EXTL2 mRNACTDPMID:23724009
Extl2Mouseantirheumatic drug increases expressionISORGD:13170156480464Antirheumatic Agents results in increased expression of EXTL2 mRNACTDPMID:24449571
Extl2Mousebenzo[a]pyrene diol epoxide I decreases expressionISORGD:131701564804647,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in decreased expression of EXTL2 mRNACTDPMID:20018196
Extl2Mousebeta-lapachone decreases expressionISORGD:13170156480464beta-lapachone results in decreased expression of EXTL2 mRNACTDPMID:38218311
Extl2Mousebis(2-ethylhexyl) phthalate increases expressionEXP 6480464Diethylhexyl Phthalate results in increased expression of EXTL2 mRNACTDPMID:34319233
Extl2Mousebisphenol A increases expressionISORGD:13076846480464bisphenol A results in increased expression of EXTL2 mRNACTDPMID:25181051
Extl2Mousebisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of EXTL2 proteinCTDPMID:35999755
Extl2Mousebisphenol A decreases expressionISORGD:13076846480464bisphenol A results in decreased expression of EXTL2 mRNACTDPMID:34947998
Extl2Mousebisphenol A increases expressionISORGD:13170156480464bisphenol A results in increased expression of EXTL2 proteinCTDPMID:33376534
Extl2Mousebisphenol A multiple interactionsISORGD:13170156480464[ginger extract results in increased abundance of Oils, Volatile] inhibits the reaction [bisphenol A results more ...CTDPMID:33376534

1 to 20 of 54 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Extl2MouseN-acetylglucosamine metabolic process involved_inISOUniProtKB:Q9UBQ62290270 GO_CentralGO_REF:0000119
Extl2MouseN-acetylglucosamine metabolic process involved_inIMP 2290270 PMID:12562774CAFAPMID:12562774
Extl2MouseUDP-N-acetylgalactosamine metabolic process involved_inIMP 2290270 PMID:12562774CAFAPMID:12562774
Extl2MouseUDP-N-acetylgalactosamine metabolic process involved_inISOUniProtKB:Q9UBQ62290270 GO_CentralGO_REF:0000119

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Extl2Mousecytosol located_inISOUniProtKB:Q9UBQ62290270 GO_CentralGO_REF:0000119
Extl2Mousecytosol located_inIEAUniProtKB:Q9UBQ6|ensembl:ENSP000003591322290270 EnsemblGO_REF:0000107
Extl2Mouseendoplasmic reticulum located_inISOUniProtKB:Q9UBQ62290270 GO_CentralGO_REF:0000119
Extl2Mouseendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-00972290270 UniProtGO_REF:0000044
Extl2Mousenucleoplasm located_inIEAUniProtKB:Q9UBQ6|ensembl:ENSP000003591322290270 EnsemblGO_REF:0000107
Extl2Mousenucleoplasm located_inISOUniProtKB:Q9UBQ62290270 GO_CentralGO_REF:0000119

Molecular Function
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Extl2Mousealpha-1,4-N-acetylgalactosaminyltransferase activity enablesIMP 2290270 PMID:12562774CAFAPMID:12562774
Extl2Mousealpha-1,4-N-acetylgalactosaminyltransferase activity enablesISOUniProtKB:Q9UBQ62290270 GO_CentralGO_REF:0000119
Extl2Mouseglucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity enablesISOUniProtKB:Q9UBQ62290270 GO_CentralGO_REF:0000119
Extl2Mouseglucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity enablesIEAEC:2.4.1.2232290270 UniProtGO_REF:0000003
Extl2Mouseglucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity enablesIEARHEA:162212290270 RHEAGO_REF:0000116
Extl2Mouseglucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity enablesIMP 2290270 PMID:12562774CAFAPMID:12562774
Extl2Mouseglycosaminoglycan binding enablesIMP 2290270 PMID:12562774CAFAPMID:12562774
Extl2Mousemanganese ion binding enablesIMP 2290270 PMID:12562774CAFAPMID:12562774
Extl2Mouseprotein binding enablesISOUniProtKB:P14136|UniProtKB:Q7Z699|UniProtKB:Q8WXH29068941 PMID:32814053IntActPMID:32814053
1 to 9 of 9 rows

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Extl2Mouseheparan sulfate biosynthetic pathway  IEA 6907045 KEGGmmu:00534
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Extl2Mouseabnormal cell morphology  IAGP 5509061 MGIPMID:23395820

#
Reference Title
Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10349636   PMID:10965119   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12562774   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:21267068   PMID:21677750   PMID:21873635   PMID:23395820   PMID:23734945   PMID:24176719   PMID:29305908   PMID:30228991   PMID:32347583   PMID:32703234  



Extl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393115,801,083 - 115,822,666 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3115,801,111 - 115,822,666 (+)EnsemblGRCm39 Ensembl
GRCm383116,007,449 - 116,029,017 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3116,007,462 - 116,029,017 (+)EnsemblGRCm38mm10GRCm38
MGSCv373115,710,367 - 115,731,934 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363115,999,481 - 116,020,876 (+)NCBIMGSCv36mm8
Celera3122,431,903 - 122,453,472 (+)NCBICelera
Cytogenetic Map3G1NCBI
cM Map350.17NCBI
EXTL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381100,872,372 - 100,895,179 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1100,872,372 - 100,895,179 (-)EnsemblGRCh38hg38GRCh38
GRCh371101,337,928 - 101,360,735 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361101,110,529 - 101,133,006 (-)NCBINCBI36Build 36hg18NCBI36
Build 341101,049,964 - 101,072,389NCBI
Celera199,599,599 - 99,622,103 (-)NCBICelera
Cytogenetic Map1p21.2NCBI
HuRef199,463,021 - 99,485,834 (-)NCBIHuRef
CHM1_11101,454,067 - 101,476,874 (-)NCBICHM1_1
T2T-CHM13v2.01100,721,212 - 100,744,883 (-)NCBIT2T-CHM13v2.0
Extl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82206,607,106 - 206,631,861 (+)NCBIGRCr8
mRatBN7.22203,922,217 - 203,946,940 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2203,922,187 - 203,943,653 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2211,579,396 - 211,599,847 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02209,469,978 - 209,490,418 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02204,287,007 - 204,307,447 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02218,951,112 - 218,972,576 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2218,951,141 - 218,971,886 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02237,037,162 - 237,058,891 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42212,163,317 - 212,183,756 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12212,140,748 - 212,146,596 (+)NCBI
Celera2196,423,452 - 196,443,884 (+)NCBICelera
Cytogenetic Map2q42NCBI
Extl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554355,509,648 - 5,531,458 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554355,509,648 - 5,527,751 (-)NCBIChiLan1.0ChiLan1.0
EXTL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21126,133,179 - 126,156,805 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11125,291,276 - 125,314,912 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01103,528,962 - 103,552,575 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11102,242,291 - 102,265,898 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1102,242,291 - 102,265,898 (-)Ensemblpanpan1.1panPan2
EXTL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1649,233,266 - 49,252,568 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl649,232,596 - 49,250,945 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha651,902,938 - 51,923,586 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0649,576,666 - 49,597,346 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl649,578,255 - 49,597,342 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1649,269,599 - 49,290,481 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0649,249,164 - 49,270,041 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0649,679,045 - 49,699,947 (+)NCBIUU_Cfam_GSD_1.0
Extl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058111,085,664 - 111,105,038 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936748890,779 - 907,156 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936748890,821 - 910,208 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EXTL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4117,396,615 - 117,420,704 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14117,396,601 - 117,420,707 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24128,940,641 - 128,961,883 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EXTL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12032,458,114 - 32,480,820 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2032,475,297 - 32,479,266 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603825,589,570 - 25,612,275 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Extl2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248573,733,845 - 3,754,159 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248573,736,984 - 3,757,209 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Extl2
1327 total Variants

Predicted Target Of
Summary Value
Count of predictions:1671
Count of miRNA genes:508
Interacting mature miRNAs:617
Transcripts:ENSMUST00000029575, ENSMUST00000106501, ENSMUST00000106502, ENSMUST00000128228, ENSMUST00000145945, ENSMUST00000149920
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 42 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
1300752Ap6q_malcohol preference 6 QTL (mouse)Not determined3100372912147045722Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse
12910796Pwbwq6_mpost-weaning body weight QTL 6 (mouse)3110084357135715812Mouse
12738440Twq3_mtestis weight QTL 3 (mouse)387228015121228015Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
1301272Cfsw1_mcystic fibrosis survival to weaning 1 (mouse)Not determined383882912117883044Mouse
12910793Pwbwq7_mpost-weaning body weight QTL 7 (mouse)3110084357135715812Mouse

1 to 10 of 42 rows
Extl2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv373115,726,850 - 115,727,436UniSTSGRCm37
MGSCv373115,730,462 - 115,730,624UniSTSGRCm37
Celera3122,448,390 - 122,448,976UniSTS
Celera3122,451,999 - 122,452,161UniSTS
Cytogenetic Map3G1UniSTS
cM Map3 UniSTS
AW146439  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383116,028,647 - 116,028,775UniSTSGRCm38
MGSCv373115,731,565 - 115,731,693UniSTSGRCm37
Celera3122,453,103 - 122,453,231UniSTS
Cytogenetic Map3G1UniSTS
Whitehead/MRC_RH31355.06UniSTS
UniSTS:225236  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383116,022,568 - 116,022,669UniSTSGRCm38
MGSCv373115,725,486 - 115,725,587UniSTSGRCm37
Celera3122,447,026 - 122,447,127UniSTS
Cytogenetic Map3G1UniSTS
Extl2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383116,023,932 - 116,024,518UniSTSGRCm38
MGSCv373115,726,850 - 115,727,436UniSTSGRCm37
Celera3122,448,390 - 122,448,976UniSTS
Cytogenetic Map3G1UniSTS
cM Map3 UniSTS
Extl2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383116,027,544 - 116,027,706UniSTSGRCm38
MGSCv373115,730,462 - 115,730,624UniSTSGRCm37
Celera3122,451,999 - 122,452,161UniSTS
Cytogenetic Map3G1UniSTS
cM Map3 UniSTS






1 to 21 of 21 rows
RefSeq Transcripts NM_001163514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001163515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_021388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011240177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017319674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036163198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB032170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB032171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC108909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF200973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK028677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG694725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY251302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 21 of 21 rows

Ensembl Acc Id: ENSMUST00000029575   ⟹   ENSMUSP00000029575
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3115,801,111 - 115,822,666 (+)Ensembl
GRCm38.p6 Ensembl3116,007,462 - 116,029,017 (+)Ensembl
Ensembl Acc Id: ENSMUST00000106501   ⟹   ENSMUSP00000102110
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3115,801,127 - 115,822,644 (+)Ensembl
GRCm38.p6 Ensembl3116,007,478 - 116,028,995 (+)Ensembl
Ensembl Acc Id: ENSMUST00000106502   ⟹   ENSMUSP00000102111
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3115,801,869 - 115,822,609 (+)Ensembl
GRCm38.p6 Ensembl3116,008,220 - 116,028,960 (+)Ensembl
Ensembl Acc Id: ENSMUST00000128228
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3115,801,134 - 115,802,145 (+)Ensembl
GRCm38.p6 Ensembl3116,007,485 - 116,008,496 (+)Ensembl
Ensembl Acc Id: ENSMUST00000145945
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3115,801,172 - 115,817,762 (+)Ensembl
GRCm38.p6 Ensembl3116,007,523 - 116,024,113 (+)Ensembl
Ensembl Acc Id: ENSMUST00000149920
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3115,801,477 - 115,804,514 (+)Ensembl
GRCm38.p6 Ensembl3116,007,828 - 116,010,865 (+)Ensembl
RefSeq Acc Id: NM_001163514   ⟹   NP_001156986
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393115,801,946 - 115,822,665 (+)NCBI
GRCm383116,008,297 - 116,029,016 (+)NCBI
MGSCv373115,710,367 - 115,731,934 (+)RGD
Celera3122,431,903 - 122,453,472 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001163515   ⟹   NP_001156987
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393115,801,098 - 115,822,665 (+)NCBI
GRCm383116,007,449 - 116,029,016 (+)NCBI
MGSCv373115,710,367 - 115,731,934 (+)RGD
Celera3122,431,903 - 122,453,472 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_021388   ⟹   NP_067363
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393115,801,098 - 115,822,665 (+)NCBI
GRCm383116,007,449 - 116,029,016 (+)NCBI
MGSCv373115,710,367 - 115,731,934 (+)RGD
Celera3122,431,903 - 122,453,472 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011240177   ⟹   XP_011238479
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393115,801,083 - 115,822,666 (+)NCBI
GRCm383116,007,452 - 116,029,017 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017319674   ⟹   XP_017175163
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393115,801,874 - 115,822,666 (+)NCBI
GRCm383116,008,209 - 116,029,017 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252739   ⟹   XP_030108599
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393115,801,101 - 115,822,666 (+)NCBI
GRCm383116,007,452 - 116,029,017 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036163198   ⟹   XP_036019091
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393115,801,874 - 115,822,666 (+)NCBI
Sequence:
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: NP_067363   ⟸   NM_021388
- Peptide Label: isoform a
- UniProtKB: Q505Q8 (UniProtKB/Swiss-Prot),   Q9CX90 (UniProtKB/Swiss-Prot),   Q9ES89 (UniProtKB/Swiss-Prot),   Q3TXF7 (UniProtKB/TrEMBL),   Q8C197 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001156987   ⟸   NM_001163515
- Peptide Label: isoform b
- UniProtKB: Q3TSR0 (UniProtKB/TrEMBL),   K0J1C6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001156986   ⟸   NM_001163514
- Peptide Label: isoform a
- UniProtKB: Q505Q8 (UniProtKB/Swiss-Prot),   Q9CX90 (UniProtKB/Swiss-Prot),   Q9ES89 (UniProtKB/Swiss-Prot),   Q3TXF7 (UniProtKB/TrEMBL),   Q8C197 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011238479   ⟸   XM_011240177
- Peptide Label: isoform X1
- UniProtKB: K0J1C6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175163   ⟸   XM_017319674
- Peptide Label: isoform X1
- UniProtKB: K0J1C6 (UniProtKB/TrEMBL)
- Sequence:
Glycosyl transferase

Name Modeler Protein Id AA Range Protein Structure
AF-Q9ES89-F1-model_v2 AlphaFold Q9ES89 1-330 view protein structure

RGD ID:6833756
Promoter ID:MM_KWN:35882
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000106502,   NM_001163515,   NM_021388,   NM_023214,   OTTMUST00000054231,   OTTMUST00000054232,   OTTMUST00000054233
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv363115,710,116 - 115,711,412 (+)MPROMDB
RGD ID:6882162
Promoter ID:EPDNEW_M4532
Type:initiation region
Name:Extl2_2
Description:Mus musculus exostoses -like 2 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4533  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383116,007,485 - 116,007,545EPDNEW
RGD ID:6882164
Promoter ID:EPDNEW_M4533
Type:initiation region
Name:Extl2_1
Description:Mus musculus exostoses -like 2 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M4532  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383116,008,336 - 116,008,396EPDNEW


1 to 29 of 29 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000027963 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000029575 ENTREZGENE
  ENSMUST00000029575.12 UniProtKB/Swiss-Prot
  ENSMUST00000106501 ENTREZGENE
  ENSMUST00000106502 ENTREZGENE
  ENSMUST00000106502.2 UniProtKB/Swiss-Prot
Gene3D-CATH Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A UniProtKB/Swiss-Prot
InterPro Glycosyltrans_GT2/GT47 UniProtKB/Swiss-Prot
  GT64 UniProtKB/Swiss-Prot
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot
KEGG Report mmu:58193 UniProtKB/Swiss-Prot
MGD MGI:1889574 ENTREZGENE
NCBI Gene 58193 ENTREZGENE
PANTHER EXOSTOSIN-LIKE 2 UniProtKB/Swiss-Prot
  SYNTHASE CPS1, PUTATIVE (AFU_ORTHOLOGUE AFUA_7G02500)-RELATED UniProtKB/Swiss-Prot
Pfam Glyco_transf_64 UniProtKB/Swiss-Prot
PhenoGen Extl2 PhenoGen
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot
UniProt EXTL2_MOUSE UniProtKB/Swiss-Prot
  K0J1C6 ENTREZGENE, UniProtKB/TrEMBL
  Q3TSR0 ENTREZGENE, UniProtKB/TrEMBL
  Q3TXF7 ENTREZGENE, UniProtKB/TrEMBL
  Q505Q8 ENTREZGENE
  Q8C089_MOUSE UniProtKB/TrEMBL
  Q8C197 ENTREZGENE, UniProtKB/TrEMBL
  Q9CX90 ENTREZGENE
  Q9ES89 ENTREZGENE
UniProt Secondary Q505Q8 UniProtKB/Swiss-Prot
  Q9CX90 UniProtKB/Swiss-Prot
1 to 29 of 29 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-09-10 Extl2  exostosin-like glycosyltransferase 2  Extl2  exostoses (multiple)-like 2  Symbol and/or name change 5135510 APPROVED