Zfp612 (zinc finger protein 612) - Rat Genome Database

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Gene: Zfp612 (zinc finger protein 612) Mus musculus
Analyze
Symbol: Zfp612
Name: zinc finger protein 612
RGD ID: 1316247
MGI Page MGI
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in central nervous system; early conceptus; reproductive system; and urinary system. Orthologous to human ZNF23 (zinc finger protein 23).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: B230354B21Rik; zinc finger protein 23
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398110,806,331 - 110,819,385 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8110,806,378 - 110,819,373 (+)EnsemblGRCm39 Ensembl
GRCm388110,079,705 - 110,092,753 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8110,079,746 - 110,092,741 (+)EnsemblGRCm38mm10GRCm38
MGSCv378112,603,634 - 112,616,652 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368112,968,891 - 112,979,325 (+)NCBIMGSCv36mm8
Celera8114,301,904 - 114,315,055 (+)NCBICelera
Cytogenetic Map8D3NCBI
cM Map857.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp612Mouseautosomal dominant dyskeratosis congenita 6  ISOZNF23 (Homo sapiens)8554872ClinVar Annotator: match by term: Dyskeratosis congenita and autosomal dominant 6ClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp612Mousehepatocellular carcinoma  ISOZNF23 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21965783

1 to 20 of 58 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp612Mouse17beta-estradiol decreases expressionEXP 6480464Estradiol results in decreased expression of ZFP612 mRNACTDPMID:39298647
Zfp612Mouse17beta-estradiol decreases expressionISOZfp612 (Rattus norvegicus)6480464Estradiol results in decreased expression of ZFP612 mRNACTDPMID:35192832
Zfp612Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ZFP612 mRNACTDPMID:37172768
Zfp612Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOZfp612 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of ZFP612 mRNACTDPMID:33387578
Zfp612Mouse2,6-dinitrotoluene affects expressionISOZfp612 (Rattus norvegicus)64804642 and 6-dinitrotoluene affects the expression of ZFP612 mRNACTDPMID:21346803
Zfp612Mouse3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOZNF23 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of ZNF23 mRNACTDPMID:28628672
Zfp612Mouse4,4'-diaminodiphenylmethane decreases expressionEXP 64804644 and 4'-diaminodiphenylmethane results in decreased expression of ZFP612 mRNACTDPMID:18648102
Zfp612Mouse4-hydroxyphenyl retinamide increases expressionEXP 6480464Fenretinide results in increased expression of ZNF23 mRNACTDPMID:28973697
Zfp612Mouseacrolein multiple interactionsISOZNF23 (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased expression of ZNF23 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased expression of ZNF23 mRNACTDPMID:32699268
Zfp612Mouseacrylamide increases expressionISOZNF23 (Homo sapiens)6480464Acrylamide results in increased expression of ZNF23 mRNACTDPMID:32763439
Zfp612Mouseaflatoxin B1 increases expressionEXP 6480464Aflatoxin B1 results in increased expression of ZFP612 mRNACTDPMID:19770486
Zfp612Mouseaflatoxin B1 decreases expressionISOZNF23 (Homo sapiens)6480464Aflatoxin B1 results in decreased expression of ZNF23 mRNACTDPMID:32234424
Zfp612Mousealpha-pinene multiple interactionsISOZNF23 (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased expression of ZNF23 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased expression of ZNF23 mRNACTDPMID:32699268
Zfp612Mouseamphetamine decreases expressionISOZfp612 (Rattus norvegicus)6480464Amphetamine results in decreased expression of ZFP612 mRNACTDPMID:30779732
Zfp612Mousebenzo[a]pyrene increases expressionEXP 6480464Benzo(a)pyrene results in increased expression of ZFP612 mRNACTDPMID:22228805
Zfp612Mousebenzo[a]pyrene decreases methylationISOZNF23 (Homo sapiens)6480464Benzo(a)pyrene results in decreased methylation of ZNF23 promoterCTDPMID:27901495
Zfp612Mousebenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of ZFP612 mRNACTDPMID:27195522
Zfp612Mousebisphenol A decreases expressionISOZfp612 (Rattus norvegicus)6480464bisphenol A results in decreased expression of ZFP612 mRNA and bisphenol A results in decreased expression of ZNF23 mRNACTDPMID:25181051 more ...
Zfp612Mousebisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of ZFP612 mRNACTDPMID:33221593
Zfp612Mousebisphenol F multiple interactionsISOZNF23 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol F] results in decreased expression of ZNF23 mRNACTDPMID:28628672

1 to 20 of 58 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp612Mouseregulation of transcription by RNA polymerase II involved_inIBAPANTHER:PTN001225435 more ...2290270 GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp612Mousenucleus is_active_inIBAPANTHER:PTN001225435 more ...2290270 GO_CentralGO_REF:0000033

Molecular Function

  

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Zfp612Mousedecreased circulating creatinine level  IEA 5509061 MGI 
Zfp612Mousedecreased mean corpuscular volume  IEA 5509061 MGI 
Zfp612Mousehyperactivity  IEA 5509061 MGI 

#
Reference Title
Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12904583   PMID:16141072   PMID:16141073   PMID:16964442   PMID:16966370  
PMID:18287559   PMID:20059953   PMID:21267068   PMID:21873635   PMID:22988430   PMID:38355793  



Zfp612
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398110,806,331 - 110,819,385 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8110,806,378 - 110,819,373 (+)EnsemblGRCm39 Ensembl
GRCm388110,079,705 - 110,092,753 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8110,079,746 - 110,092,741 (+)EnsemblGRCm38mm10GRCm38
MGSCv378112,603,634 - 112,616,652 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368112,968,891 - 112,979,325 (+)NCBIMGSCv36mm8
Celera8114,301,904 - 114,315,055 (+)NCBICelera
Cytogenetic Map8D3NCBI
cM Map857.41NCBI
ZNF23
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381671,447,597 - 71,462,247 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1671,447,597 - 71,463,095 (-)EnsemblGRCh38hg38GRCh38
GRCh371671,481,500 - 71,496,150 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361670,039,001 - 70,053,618 (-)NCBINCBI36Build 36hg18NCBI36
Build 341670,039,000 - 70,053,618NCBI
Celera1655,797,355 - 55,811,972 (-)NCBICelera
Cytogenetic Map16q22.2NCBI
HuRef1657,249,546 - 57,264,163 (-)NCBIHuRef
CHM1_11672,894,355 - 72,908,972 (-)NCBICHM1_1
T2T-CHM13v2.01677,264,821 - 77,279,471 (-)NCBIT2T-CHM13v2.0
Zfp612
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81954,963,400 - 54,976,888 (+)NCBIGRCr8
mRatBN7.21938,053,953 - 38,071,196 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1938,053,967 - 38,067,455 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1944,860,375 - 44,873,845 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01945,513,729 - 45,527,199 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01947,823,324 - 47,836,794 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01941,556,907 - 41,570,352 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1941,559,487 - 41,567,013 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01952,384,460 - 52,398,149 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41939,961,602 - 39,975,049 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11939,966,434 - 39,977,350 (+)NCBI
Celera1937,451,827 - 37,465,266 (+)NCBICelera
Cytogenetic Map19q12NCBI
Znf23
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554844,161,259 - 4,170,157 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554844,162,454 - 4,174,816 (-)NCBIChiLan1.0ChiLan1.0
ZNF23
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21882,697,257 - 82,711,980 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11688,630,747 - 88,645,541 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01653,548,640 - 53,563,433 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11671,284,708 - 71,299,436 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1671,284,714 - 71,299,418 (-)Ensemblpanpan1.1panPan2
ZNF23
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1577,246,374 - 77,260,761 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl577,246,667 - 77,260,350 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha577,208,288 - 77,222,683 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0577,685,240 - 77,699,637 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl577,685,249 - 77,699,563 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1577,505,663 - 77,519,927 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0577,328,758 - 77,343,156 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0577,827,669 - 77,842,064 (-)NCBIUU_Cfam_GSD_1.0
Znf23
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934937,295,771 - 37,326,195 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647522,272,514 - 22,293,278 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647522,283,924 - 22,293,074 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF23
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl614,463,304 - 14,480,863 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1614,463,135 - 14,480,783 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF23
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1554,578,420 - 54,609,302 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604717,386,913 - 17,417,906 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf23
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474613,633,902 - 13,639,348 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474613,633,182 - 13,676,121 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Zfp612
889 total Variants

Predicted Target Of
Summary Value
Count of predictions:50
Count of miRNA genes:49
Interacting mature miRNAs:49
Transcripts:ENSMUST00000058804
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 34 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300560Tgl1_mtriglyceride level 1 (mouse)Not determined8102486208111650036Mouse
4141435Fbtq3_mfemoral bone trait QTL 3 (mouse)Not determined8100965309130127694Mouse
35673316Ari3_mantibody response to influenza 3, day 15, IgM (mouse)8109426632113826632Mouse
11252141Fdr2_mfat response to dietary restriction 2 (mouse)898390634130127694Mouse
1302105Im1_mImmunoregulatory 1 (mouse)Not determined899828531130127694Mouse
1301080Sluc9_msusceptibility to lung cancer 9 (mouse)Not determined899828531130127694Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
36049782Arc2_mantibody response to CHIKV 2, day 7, IgM (mouse)8109426632113826632Mouse
36049783Arc3_mantibody response to CHIKV 3, day 7, FRNT50 (mouse)8109426632113826632Mouse
36049780Ars12_mantibody response to SARS-CoV 12, 4 days post-rechallenge, IgM (mouse)8109426632113826632Mouse

1 to 10 of 34 rows
Zfp612  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388110,088,566 - 110,088,895UniSTSGRCm38
MGSCv378112,612,466 - 112,612,795UniSTSGRCm37
Celera8114,310,869 - 114,311,198UniSTS
Cytogenetic Map8D3UniSTS
cM Map8 UniSTS






1 to 22 of 22 rows
RefSeq Transcripts NM_175480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006530915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI603944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK046220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY123080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 22 of 22 rows

Ensembl Acc Id: ENSMUST00000058804   ⟹   ENSMUSP00000062474
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8110,806,396 - 110,817,642 (+)Ensembl
GRCm38.p6 Ensembl8110,079,764 - 110,091,010 (+)Ensembl
Ensembl Acc Id: ENSMUST00000212754   ⟹   ENSMUSP00000148717
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8110,806,394 - 110,819,373 (+)Ensembl
GRCm38.p6 Ensembl8110,079,762 - 110,092,741 (+)Ensembl
Ensembl Acc Id: ENSMUST00000213084
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl8110,806,378 - 110,807,790 (+)Ensembl
GRCm38.p6 Ensembl8110,079,746 - 110,081,158 (+)Ensembl
RefSeq Acc Id: NM_175480   ⟹   NP_780689
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,366 - 110,819,384 (+)NCBI
GRCm388110,079,734 - 110,092,752 (+)NCBI
MGSCv378112,603,634 - 112,616,652 (+)RGD
Celera8114,301,904 - 114,315,055 (+)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530907   ⟹   XP_006530970
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,339 - 110,819,385 (+)NCBI
GRCm388110,079,707 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530908   ⟹   XP_006530971
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,331 - 110,819,385 (+)NCBI
GRCm388110,079,725 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530909   ⟹   XP_006530972
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,339 - 110,819,385 (+)NCBI
GRCm388110,079,707 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530910   ⟹   XP_006530973
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,337 - 110,819,385 (+)NCBI
GRCm388110,079,705 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530912   ⟹   XP_006530975
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,337 - 110,819,385 (+)NCBI
GRCm388110,079,705 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006530915   ⟹   XP_006530978
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,340 - 110,819,385 (+)NCBI
GRCm388110,079,708 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011248359   ⟹   XP_011246661
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,339 - 110,819,385 (+)NCBI
GRCm388110,079,707 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011248360   ⟹   XP_011246662
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,350 - 110,819,385 (+)NCBI
GRCm388110,079,718 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243507   ⟹   XP_030099367
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,340 - 110,819,385 (+)NCBI
GRCm388110,079,708 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243508   ⟹   XP_030099368
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,337 - 110,819,385 (+)NCBI
GRCm388110,079,705 - 110,092,753 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243509   ⟹   XP_030099369
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398110,806,340 - 110,819,385 (+)NCBI
GRCm388110,079,708 - 110,092,753 (+)NCBI
Sequence:
1 to 5 of 14 rows
1 to 5 of 14 rows
RefSeq Acc Id: NP_780689   ⟸   NM_175480
- UniProtKB: A0A1D5RMC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530973   ⟸   XM_006530910
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006530975   ⟸   XM_006530912
- Peptide Label: isoform X4
- UniProtKB: A0A1D5RMC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530972   ⟸   XM_006530909
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006530978   ⟸   XM_006530915
- Peptide Label: isoform X6
- UniProtKB: Q3V041 (UniProtKB/TrEMBL),   G5E8C8 (UniProtKB/TrEMBL)
- Sequence:
C2H2-type   KRAB

Name Modeler Protein Id AA Range Protein Structure
AF-A0A1D5RMC2-F1-model_v2 AlphaFold A0A1D5RMC2 1-672 view protein structure

RGD ID:8668259
Promoter ID:EPDNEW_M12161
Type:initiation region
Name:Zfp612_1
Description:Mus musculus zinc finger protein 612 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm388110,079,718 - 110,079,778EPDNEW
RGD ID:6843915
Promoter ID:MM_KWN:55718
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:NM_175480,   UC009NJW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv368112,603,404 - 112,603,904 (+)MPROMDB


1 to 40 of 42 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000044676 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000058804 ENTREZGENE
  ENSMUST00000058804.10 UniProtKB/TrEMBL
  ENSMUST00000212754 ENTREZGENE
  ENSMUST00000212754.2 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro GLI_C2H2-zinc-finger UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Krueppel-associated_box UniProtKB/TrEMBL
  Zinc_finger UniProtKB/TrEMBL
  Znf_C2H2/integrase_DNA-bd UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
KEGG Report mmu:234725 UniProtKB/TrEMBL
MGD MGI:2443465 ENTREZGENE
NCBI Gene 234725 ENTREZGENE
PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/TrEMBL
  C2H2-TYPE DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/TrEMBL
  KRUEPPEL-LIKE TRANSCRIPTION FACTOR UniProtKB/TrEMBL
  PR DOMAIN ZINC FINGER PROTEIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 154-LIKE UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 22 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN ZIC AND GLI UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PhenoGen Zfp612 PhenoGen
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP Krueppel-associated_box UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A1D5RMC2 ENTREZGENE, UniProtKB/TrEMBL
  G5E8C8 ENTREZGENE
  Q3TRD7_MOUSE UniProtKB/TrEMBL
  Q3V041 ENTREZGENE, UniProtKB/TrEMBL
  Q80V27_MOUSE UniProtKB/TrEMBL
  Q8BIL9_MOUSE UniProtKB/TrEMBL
1 to 40 of 42 rows