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Gene: PTOV1 (PTOV1 extended AT-hook containing adaptor protein) Homo sapiens

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Symbol:

PTOV1

Name:

PTOV1 extended AT-hook containing adaptor protein

RGD ID:

1315896

HGNC Page

HGNC:9632

Description:

Predicted to be involved in positive regulation of transcription by RNA polymerase II. Located in nucleoplasm.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

ACID2; activator interaction domain-containing protein 2; DKFZp586I111; MGC71475; prostate tumor overexpressed 1; prostate tumor overexpressed gene 1; prostate tumor-overexpressed gene 1 protein; PTOV-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Related Pseudogenes:

PTOV1P1

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	49,850,705 - 49,860,742 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	49,850,735 - 49,860,744 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	50,353,962 - 50,363,999 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	55,046,228 - 55,055,811 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	55,046,293 - 55,055,809	NCBI
Celera	19	47,223,866 - 47,233,449 (+)	NCBI		Celera
Cytogenetic Map	19	q13.33	NCBI
HuRef	19	46,730,759 - 46,740,340 (+)	NCBI		HuRef
CHM1_1	19	50,356,254 - 50,365,835 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	52,850,843 - 52,860,879 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PTOV1	Human	developmental and epileptic encephalopathy 12		IAGP	(Homo sapiens) and (Homo sapiens)	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 12	ClinVar	PMID:28492532
PTOV1	Human	developmental and epileptic encephalopathy 12		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Developmental and epileptic encephalopathy and 12	ClinVar	PMID:27066586 more ...
PTOV1	Human	long QT syndrome		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Long QT syndrome	ClinVar	PMID:26132555

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PTOV1	Human	Disease Progression		EXP		11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:21364753
PTOV1	Human	Stomach Neoplasms		EXP		11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:21364753

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PTOV1	Human	1,2-dimethylhydrazine	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of PTOV1 mRNA]	CTD	PMID:22206623
PTOV1	Human	1,2-dimethylhydrazine	increases expression	ISO	Ptov1 (Mus musculus)	6480464	1 and 2-Dimethylhydrazine results in increased expression of PTOV1 mRNA	CTD	PMID:22206623
PTOV1	Human	17alpha-ethynylestradiol	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PTOV1 mRNA	CTD	PMID:17942748
PTOV1	Human	17alpha-ethynylestradiol	affects expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Ethinyl Estradiol affects the expression of PTOV1 mRNA	CTD	PMID:26865667
PTOV1	Human	17beta-hydroxy-17-methylestra-4,9,11-trien-3-one	increases expression	EXP		6480464	Metribolone results in increased expression of PTOV1 mRNA	CTD	PMID:17010196
PTOV1	Human	2,3,7,8-tetrachlorodibenzodioxine	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PTOV1 mRNA	CTD	PMID:17942748
PTOV1	Human	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in increased expression of PTOV1 mRNA	CTD	PMID:34747641
PTOV1	Human	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Tetrachlorodibenzodioxin results in decreased expression of PTOV1 mRNA	CTD	PMID:32109520
PTOV1	Human	2,4,6-trinitrotoluene	affects expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Trinitrotoluene affects the expression of PTOV1 mRNA	CTD	PMID:21346803
PTOV1	Human	3H-1,2-dithiole-3-thione	increases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	1 and 2-dithiol-3-thione results in increased expression of PTOV1 mRNA	CTD	PMID:19162173
PTOV1	Human	4,4'-sulfonyldiphenol	decreases methylation	ISO	Ptov1 (Mus musculus)	6480464	bisphenol S results in decreased methylation of PTOV1 exon and bisphenol S results in decreased methylation of PTOV1 promoter	CTD	PMID:33297965
PTOV1	Human	4,4'-sulfonyldiphenol	affects methylation	ISO	Ptov1 (Mus musculus)	6480464	bisphenol S affects the methylation of PTOV1 gene	CTD	PMID:31683443
PTOV1	Human	4,4'-sulfonyldiphenol	multiple interactions	ISO	Ptov1 (Rattus norvegicus)	6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of PTOV1 mRNA	CTD	PMID:36041667
PTOV1	Human	4,4'-sulfonyldiphenol	decreases methylation	EXP		6480464	bisphenol S results in decreased methylation of PTOV1 gene	CTD	PMID:31601247
PTOV1	Human	aflatoxin B1	decreases expression	EXP		6480464	Aflatoxin B1 results in decreased expression of PTOV1 mRNA	CTD	PMID:27153756
PTOV1	Human	all-trans-retinoic acid	increases expression	EXP		6480464	Tretinoin results in increased expression of PTOV1 mRNA	CTD	PMID:23724009
PTOV1	Human	antirheumatic drug	increases expression	EXP		6480464	Antirheumatic Agents results in increased expression of PTOV1 mRNA	CTD	PMID:24449571
PTOV1	Human	arsenite(3-)	increases methylation	EXP		6480464	arsenite results in increased methylation of PTOV1 promoter	CTD	PMID:23974009
PTOV1	Human	benzo[a]pyrene	decreases methylation	EXP		6480464	Benzo(a)pyrene results in decreased methylation of PTOV1 3' UTR	CTD	PMID:27901495
PTOV1	Human	beta-lapachone	decreases expression	EXP		6480464	beta-lapachone results in decreased expression of PTOV1 mRNA	CTD	PMID:38218311
PTOV1	Human	bis(2-ethylhexyl) phthalate	increases expression	ISO	Ptov1 (Mus musculus)	6480464	Diethylhexyl Phthalate results in increased expression of PTOV1 mRNA	CTD	PMID:33754040
PTOV1	Human	bisphenol A	affects expression	ISO	Ptov1 (Rattus norvegicus)	6480464	bisphenol A affects the expression of PTOV1 mRNA	CTD	PMID:25181051
PTOV1	Human	bisphenol A	multiple interactions	ISO	Ptov1 (Rattus norvegicus)	6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of PTOV1 mRNA	CTD	PMID:36041667
PTOV1	Human	bisphenol A	increases expression	ISO	Ptov1 (Mus musculus)	6480464	bisphenol A results in increased expression of PTOV1 mRNA	CTD	PMID:33221593
PTOV1	Human	bisphenol A	increases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	bisphenol A results in increased expression of PTOV1 mRNA	CTD	PMID:34947998 and PMID:38750585
PTOV1	Human	bisphenol F	multiple interactions	ISO	Ptov1 (Rattus norvegicus)	6480464	[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of PTOV1 mRNA	CTD	PMID:36041667
PTOV1	Human	caffeine	decreases phosphorylation	EXP		6480464	Caffeine results in decreased phosphorylation of PTOV1 protein	CTD	PMID:35688186
PTOV1	Human	carbon nanotube	decreases expression	ISO	Ptov1 (Mus musculus)	6480464	Nanotubes and Carbon results in decreased expression of PTOV1 mRNA	CTD	PMID:25620056
PTOV1	Human	chlorpyrifos	increases expression	ISO	Ptov1 (Mus musculus)	6480464	Chlorpyrifos results in increased expression of PTOV1 mRNA	CTD	PMID:37019170
PTOV1	Human	clofibrate	decreases expression	ISO	Ptov1 (Mus musculus)	6480464	Clofibrate results in decreased expression of PTOV1 mRNA	CTD	PMID:17585979
PTOV1	Human	clofibrate	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	[Clofibrate co-treated with Acetaminophen] affects the expression of PTOV1 mRNA and PPARA affects the reaction [[Clofibrate co-treated with Acetaminophen] affects the expression of PTOV1 mRNA]	CTD	PMID:17585979
PTOV1	Human	cocaine	affects expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Cocaine affects the expression of PTOV1 mRNA	CTD	PMID:20187946
PTOV1	Human	dioxygen	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	[sulforaphane affects the susceptibility to Oxygen] which affects the expression of PTOV1 mRNA	CTD	PMID:30529165
PTOV1	Human	elemental selenium	increases expression	EXP		6480464	Selenium results in increased expression of PTOV1 mRNA	CTD	PMID:19244175
PTOV1	Human	endosulfan	increases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Endosulfan results in increased expression of PTOV1 mRNA	CTD	PMID:29391264
PTOV1	Human	folic acid	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of PTOV1 mRNA]	CTD	PMID:22206623
PTOV1	Human	FR900359	increases phosphorylation	EXP		6480464	FR900359 results in increased phosphorylation of PTOV1 protein	CTD	PMID:37730182
PTOV1	Human	genistein	decreases expression	EXP		6480464	Genistein results in decreased expression of PTOV1 mRNA	CTD	PMID:26865667
PTOV1	Human	hypochlorous acid	decreases expression	ISO	Ptov1 (Mus musculus)	6480464	Hypochlorous Acid results in decreased expression of PTOV1 mRNA	CTD	PMID:19376150
PTOV1	Human	mercury atom	decreases expression	ISO	Ptov1 (Mus musculus)	6480464	Mercury analog results in decreased expression of PTOV1 mRNA	CTD	PMID:25056781
PTOV1	Human	mercury(0)	decreases expression	ISO	Ptov1 (Mus musculus)	6480464	Mercury analog results in decreased expression of PTOV1 mRNA	CTD	PMID:25056781
PTOV1	Human	methotrexate	affects response to substance	EXP		6480464	PTOV1 protein affects the susceptibility to Methotrexate	CTD	PMID:16217747
PTOV1	Human	paracetamol	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	[Clofibrate co-treated with Acetaminophen] affects the expression of PTOV1 mRNA and PPARA affects the reaction [[Clofibrate co-treated with Acetaminophen] affects the expression of PTOV1 mRNA]	CTD	PMID:17585979
PTOV1	Human	paracetamol	decreases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Acetaminophen results in decreased expression of PTOV1 mRNA	CTD	PMID:33387578
PTOV1	Human	pirinixic acid	increases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	pirinixic acid results in increased expression of PTOV1 mRNA	CTD	PMID:19162173
PTOV1	Human	pyrogallol	increases expression	ISO	Ptov1 (Mus musculus)	6480464	Pyrogallol results in increased expression of PTOV1 mRNA	CTD	PMID:20362636
PTOV1	Human	pyrogallol	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	Silymarin inhibits the reaction [Pyrogallol results in increased expression of PTOV1 mRNA]	CTD	PMID:20362636
PTOV1	Human	resveratrol	multiple interactions	EXP		6480464	[Plant Extracts co-treated with Resveratrol] results in decreased expression of PTOV1 mRNA	CTD	PMID:23557933
PTOV1	Human	Salinomycin	decreases expression	EXP		6480464	salinomycin results in decreased expression of PTOV1 mRNA	CTD	PMID:19682730
PTOV1	Human	selenium atom	increases expression	EXP		6480464	Selenium results in increased expression of PTOV1 mRNA	CTD	PMID:19244175
PTOV1	Human	sodium arsenite	increases expression	EXP		6480464	sodium arsenite results in increased expression of PTOV1 mRNA	CTD	PMID:38568856
PTOV1	Human	sulforaphane	multiple interactions	ISO	Ptov1 (Mus musculus)	6480464	[sulforaphane affects the susceptibility to Oxygen] which affects the expression of PTOV1 mRNA	CTD	PMID:30529165
PTOV1	Human	temozolomide	decreases expression	EXP		6480464	Temozolomide results in decreased expression of PTOV1 mRNA	CTD	PMID:31758290
PTOV1	Human	thimerosal	decreases expression	EXP		6480464	Thimerosal results in decreased expression of PTOV1 mRNA	CTD	PMID:27188386
PTOV1	Human	thioacetamide	decreases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Thioacetamide results in decreased expression of PTOV1 mRNA	CTD	PMID:34492290
PTOV1	Human	thiram	decreases expression	EXP		6480464	Thiram results in decreased expression of PTOV1 mRNA	CTD	PMID:38568856
PTOV1	Human	titanium dioxide	decreases methylation	ISO	Ptov1 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of PTOV1 gene	CTD	PMID:35295148
PTOV1	Human	toluene	increases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	Toluene results in increased expression of PTOV1 mRNA	CTD	PMID:22967744
PTOV1	Human	triphenyl phosphate	affects expression	EXP		6480464	triphenyl phosphate affects the expression of PTOV1 mRNA	CTD	PMID:37042841
PTOV1	Human	triptonide	decreases expression	ISO	Ptov1 (Mus musculus)	6480464	triptonide results in decreased expression of PTOV1 mRNA	CTD	PMID:33045310
PTOV1	Human	vinclozolin	decreases expression	ISO	Ptov1 (Rattus norvegicus)	6480464	vinclozolin results in decreased expression of PTOV1 mRNA	CTD	PMID:23034163
PTOV1	Human	vorinostat	decreases expression	EXP		6480464	vorinostat results in decreased expression of PTOV1 mRNA	CTD	PMID:27188386

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PTOV1	Human	positive regulation of transcription by RNA polymerase II	involved_in	IBA	MGI:1922863 more ...	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PTOV1	Human	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
PTOV1	Human	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
PTOV1	Human	cytoplasm	located_in	IEA	UniRule:UR001695798	150520179		UniProt	GO_REF:0000104
PTOV1	Human	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
PTOV1	Human	nucleoplasm	located_in	IDA		150520179		HPA	GO_REF:0000052
PTOV1	Human	nucleus	located_in	IEA	UniRule:UR001695798	150520179		UniProt	GO_REF:0000104
PTOV1	Human	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
PTOV1	Human	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043
PTOV1	Human	perinuclear region of cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0198	150520179		UniProt	GO_REF:0000044
PTOV1	Human	perinuclear region of cytoplasm	located_in	IEA	UniRule:UR001695798	150520179		UniProt	GO_REF:0000104
PTOV1	Human	plasma membrane	located_in	IEA	UniProtKB-KW:KW-1003	150520179		UniProt	GO_REF:0000043
PTOV1	Human	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	150520179		UniProt	GO_REF:0000044
PTOV1	Human	transcription regulator complex	part_of	IBA	MGI:1922863 more ...	150520179		GO_Central	GO_REF:0000033

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PTOV1	Human	Prolonged QT interval		IAGP	(Homo sapiens)	8554872	ClinVar Annotator: match by term: Long QT syndrome	ClinVar	PMID:26132555

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8619474	PMID:8889548	PMID:9110174	PMID:11313889	PMID:12477932	PMID:12598323	PMID:12975309	PMID:15713644	PMID:15778465	PMID:16169070	PMID:17641689	PMID:18451224
PMID:20562859	PMID:21090589	PMID:21110951	PMID:21145461	PMID:21181414	PMID:21873635	PMID:22507319	PMID:23314748	PMID:23321499	PMID:23455324	PMID:24366813	PMID:24684754
PMID:24947166	PMID:25270739	PMID:25634174	PMID:26156556	PMID:26186194	PMID:26305455	PMID:26496610	PMID:26499835	PMID:26746655	PMID:26760575	PMID:26972000	PMID:26992242
PMID:27173435	PMID:27609421	PMID:27804940	PMID:28029646	PMID:28298427	PMID:28514442	PMID:28651486	PMID:28675297	PMID:28986522	PMID:30922918	PMID:31050705	PMID:31083670
PMID:31253590	PMID:31387622	PMID:33660365	PMID:33729478	PMID:33961781	PMID:34654719	PMID:35271311	PMID:35944360	PMID:36424410	PMID:36931259	PMID:37317656	PMID:37499664

PTOV1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	49,850,705 - 49,860,742 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	49,850,735 - 49,860,744 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	50,353,962 - 50,363,999 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	55,046,228 - 55,055,811 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	55,046,293 - 55,055,809	NCBI
Celera	19	47,223,866 - 47,233,449 (+)	NCBI		Celera
Cytogenetic Map	19	q13.33	NCBI
HuRef	19	46,730,759 - 46,740,340 (+)	NCBI		HuRef
CHM1_1	19	50,356,254 - 50,365,835 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	52,850,843 - 52,860,879 (+)	NCBI		T2T-CHM13v2.0

Ptov1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	44,512,491 - 44,523,542 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	44,512,491 - 44,519,212 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	44,863,067 - 44,870,519 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	44,863,067 - 44,869,788 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	52,118,438 - 52,125,158 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	44,731,110 - 44,737,830 (-)	NCBI		MGSCv36	mm8
Celera	7	40,313,277 - 40,320,004 (-)	NCBI		Celera
Cytogenetic Map	7	B3	NCBI
cM Map	7	28.94	NCBI

Ptov1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	104,483,553 - 104,496,161 (-)	NCBI		GRCr8
mRatBN7.2	1	95,347,065 - 95,354,514 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	95,347,068 - 95,353,613 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	100,732,451 - 100,738,997 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	109,205,116 - 109,211,662 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	102,495,525 - 102,502,071 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	100,859,346 - 100,866,917 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	100,859,349 - 100,865,894 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	101,923,967 - 101,931,540 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	95,335,898 - 95,342,444 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	95,414,009 - 95,420,555 (-)	NCBI
Celera	1	89,608,793 - 89,615,339 (-)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

Ptov1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955559	1,069,481 - 1,078,735 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955559	1,070,856 - 1,079,052 (-)	NCBI	ChiLan1.0	ChiLan1.0

PTOV1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	55,960,378 - 55,977,107 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	57,884,596 - 57,897,748 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	46,863,575 - 46,874,494 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	55,779,380 - 55,789,585 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	55,779,915 - 55,789,585 (+)	Ensembl	panpan1.1		panPan2

PTOV1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	106,702,970 - 106,711,945 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	106,702,971 - 106,711,781 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	106,285,880 - 106,294,856 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	107,223,889 - 107,232,866 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	107,223,897 - 107,232,707 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	106,895,973 - 106,904,950 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	106,537,957 - 106,546,934 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	107,378,439 - 107,387,415 (-)	NCBI		UU_Cfam_GSD_1.0

Ptov1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	22,021,538 - 22,031,225 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936664	3,639,675 - 3,648,919 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936664	3,639,681 - 3,649,415 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PTOV1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	54,865,187 - 54,873,743 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	54,865,591 - 54,873,751 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	50,594,717 - 50,602,860 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PTOV1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	43,009,167 - 43,018,347 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666073	22,983,767 - 22,993,630 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ptov1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	4,468,426 - 4,476,721 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624832	4,468,427 - 4,476,805 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in PTOV1
52 total Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 19q13.33-13.43(chr19:47908540-58539965)x3	copy number gain	See cases [RCV000052914]	Chr19:47908540..58539965 [GRCh38] Chr19:48411797..59051332 [GRCh37] Chr19:53103609..63743144 [NCBI36] Chr19:19q13.33-13.43	pathogenic
GRCh38/hg38 19q13.33-13.43(chr19:47929575-58572206)x3	copy number gain	See cases [RCV000052915]	Chr19:47929575..58572206 [GRCh38] Chr19:48432832..59083573 [GRCh37] Chr19:53124644..63775385 [NCBI36] Chr19:19q13.33-13.43	pathogenic
NM_001394010.1(PTOV1):c.635A>T (p.Lys212Met)	single nucleotide variant	Long QT syndrome [RCV000190203]	Chr19:49857051 [GRCh38] Chr19:50360308 [GRCh37] Chr19:19q13.33	likely benign
NM_001394010.1(PTOV1):c.335C>A (p.Thr112Asn)	single nucleotide variant	not specified [RCV004304906]	Chr19:49854677 [GRCh38] Chr19:50357934 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.989C>T (p.Thr330Ile)	single nucleotide variant	not specified [RCV004317368]	Chr19:49858601 [GRCh38] Chr19:50361858 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.287G>T (p.Ser96Ile)	single nucleotide variant	not specified [RCV004295168]	Chr19:49854521 [GRCh38] Chr19:50357778 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.260G>A (p.Arg87Gln)	single nucleotide variant	not specified [RCV004288704]	Chr19:49854494 [GRCh38] Chr19:50357751 [GRCh37] Chr19:19q13.33	uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)	copy number gain	See cases [RCV000512296]	Chr19:260912..58956888 [GRCh37] Chr19:19p13.3-q13.43	pathogenic
NM_001394010.1(PTOV1):c.584T>C (p.Ile195Thr)	single nucleotide variant	not specified [RCV004305464]	Chr19:49857000 [GRCh38] Chr19:50360257 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.602G>A (p.Arg201His)	single nucleotide variant	not specified [RCV004294113]	Chr19:49857018 [GRCh38] Chr19:50360275 [GRCh37] Chr19:19q13.33	uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:260912-58956888)x3	copy number gain	See cases [RCV000511289]	Chr19:260912..58956888 [GRCh37] Chr19:19p13.3-q13.43	pathogenic\|uncertain significance
GRCh37/hg19 19p13.3-q13.43(chr19:68029-59110290)x3	copy number gain	not provided [RCV000752439]	Chr19:68029..59110290 [GRCh37] Chr19:19p13.3-q13.43	pathogenic
GRCh37/hg19 19p13.3-q13.43(chr19:260912-59097160)x3	copy number gain	not provided [RCV000752444]	Chr19:260912..59097160 [GRCh37] Chr19:19p13.3-q13.43	pathogenic
GRCh37/hg19 19q13.33(chr19:49600909-51366070)x3	copy number gain	not provided [RCV000847250]	Chr19:49600909..51366070 [GRCh37] Chr19:19q13.33	uncertain significance
GRCh37/hg19 19q13.31-13.42(chr19:44738088-53621561)x3	copy number gain	not provided [RCV001007050]	Chr19:44738088..53621561 [GRCh37] Chr19:19q13.31-13.42	pathogenic
NM_001394010.1(PTOV1):c.214T>G (p.Ser72Ala)	single nucleotide variant	not specified [RCV004315236]	Chr19:49854448 [GRCh38] Chr19:50357705 [GRCh37] Chr19:19q13.33	uncertain significance
GRCh37/hg19 19q13.32-13.42(chr19:47939842-54626871)	copy number gain	not provided [RCV001249294]	Chr19:47939842..54626871 [GRCh37] Chr19:19q13.32-13.42	not provided
GRCh37/hg19 19q13.33-13.43(chr19:48463931-57095254)x3	copy number gain	not provided [RCV001259944]	Chr19:48463931..57095254 [GRCh37] Chr19:19q13.33-13.43	pathogenic
GRCh37/hg19 19q13.33-13.41(chr19:49911081-53127438)	copy number gain	not specified [RCV002052689]	Chr19:49911081..53127438 [GRCh37] Chr19:19q13.33-13.41	likely pathogenic
GRCh37/hg19 19q13.33(chr19:50355646-50552140)	copy number gain	not specified [RCV002052690]	Chr19:50355646..50552140 [GRCh37] Chr19:19q13.33	uncertain significance
NC_000019.9:g.(?_49519325)_(50366015_?)dup	duplication	Developmental and epileptic encephalopathy, 12 [RCV002030046]	Chr19:49519325..50366015 [GRCh37] Chr19:19q13.33	uncertain significance
NC_000019.9:g.(?_48618906)_(50921204_?)dup	duplication	Developmental and epileptic encephalopathy, 12 [RCV001939968]\|not provided [RCV001916178]	Chr19:48618906..50921204 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.587C>T (p.Ser196Phe)	single nucleotide variant	not specified [RCV004315569]	Chr19:49857003 [GRCh38] Chr19:50360260 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.998T>C (p.Leu333Pro)	single nucleotide variant	not specified [RCV004132559]	Chr19:49858610 [GRCh38] Chr19:50361867 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.685A>G (p.Ile229Val)	single nucleotide variant	not specified [RCV004162541]	Chr19:49857101 [GRCh38] Chr19:50360358 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.292G>A (p.Val98Ile)	single nucleotide variant	not specified [RCV004223103]	Chr19:49854526 [GRCh38] Chr19:50357783 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.1136T>G (p.Ile379Ser)	single nucleotide variant	not specified [RCV004120123]	Chr19:49860080 [GRCh38] Chr19:50363337 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.38C>A (p.Ala13Asp)	single nucleotide variant	not specified [RCV004104753]	Chr19:49851366 [GRCh38] Chr19:50354623 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.125G>A (p.Arg42Gln)	single nucleotide variant	not specified [RCV004149589]	Chr19:49851453 [GRCh38] Chr19:50354710 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.1175G>A (p.Arg392His)	single nucleotide variant	not specified [RCV004190691]	Chr19:49860119 [GRCh38] Chr19:50363376 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.853G>A (p.Val285Ile)	single nucleotide variant	not specified [RCV004096954]	Chr19:49857952 [GRCh38] Chr19:50361209 [GRCh37] Chr19:19q13.33	likely benign
NM_001394010.1(PTOV1):c.16C>T (p.Arg6Cys)	single nucleotide variant	not specified [RCV004128058]	Chr19:49851344 [GRCh38] Chr19:50354601 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.208G>T (p.Gly70Cys)	single nucleotide variant	not specified [RCV004209551]	Chr19:49854442 [GRCh38] Chr19:50357699 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.1049G>A (p.Cys350Tyr)	single nucleotide variant	not specified [RCV004180031]	Chr19:49859993 [GRCh38] Chr19:50363250 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.194C>T (p.Ala65Val)	single nucleotide variant	not specified [RCV004147601]	Chr19:49854428 [GRCh38] Chr19:50357685 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.130C>T (p.Pro44Ser)	single nucleotide variant	not specified [RCV004193737]	Chr19:49851458 [GRCh38] Chr19:50354715 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.17G>A (p.Arg6His)	single nucleotide variant	not specified [RCV004070923]	Chr19:49851345 [GRCh38] Chr19:50354602 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.22C>T (p.Pro8Ser)	single nucleotide variant	not specified [RCV004183455]	Chr19:49851350 [GRCh38] Chr19:50354607 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.49C>G (p.Leu17Val)	single nucleotide variant	not specified [RCV004165016]	Chr19:49851377 [GRCh38] Chr19:50354634 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.891G>T (p.Gln297His)	single nucleotide variant	not specified [RCV004241880]	Chr19:49858069 [GRCh38] Chr19:50361326 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.765C>G (p.Asn255Lys)	single nucleotide variant	not specified [RCV004253965]	Chr19:49857743 [GRCh38] Chr19:50361000 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.128G>A (p.Gly43Asp)	single nucleotide variant	not specified [RCV004260323]	Chr19:49851456 [GRCh38] Chr19:50354713 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.116C>T (p.Ala39Val)	single nucleotide variant	not specified [RCV004258905]	Chr19:49851444 [GRCh38] Chr19:50354701 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.451A>G (p.Thr151Ala)	single nucleotide variant	not specified [RCV004329823]	Chr19:49854970 [GRCh38] Chr19:50358227 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.818C>T (p.Pro273Leu)	single nucleotide variant	not specified [RCV004358830]	Chr19:49857917 [GRCh38] Chr19:50361174 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.380A>G (p.Gln127Arg)	single nucleotide variant	not specified [RCV004348512]	Chr19:49854722 [GRCh38] Chr19:50357979 [GRCh37] Chr19:19q13.33	uncertain significance
GRCh37/hg19 19q13.33-13.43(chr19:49625130-57647352)x3	copy number gain	not provided [RCV003485200]	Chr19:49625130..57647352 [GRCh37] Chr19:19q13.33-13.43	likely pathogenic
GRCh37/hg19 19q13.33-13.41(chr19:48905537-51614930)x3	copy number gain	not specified [RCV003986127]	Chr19:48905537..51614930 [GRCh37] Chr19:19q13.33-13.41	likely pathogenic
NM_001394010.1(PTOV1):c.1193A>G (p.Gln398Arg)	single nucleotide variant	not specified [RCV004444902]	Chr19:49860137 [GRCh38] Chr19:50363394 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.65G>T (p.Arg22Leu)	single nucleotide variant	not specified [RCV004444905]	Chr19:49851393 [GRCh38] Chr19:50354650 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.827G>A (p.Arg276Gln)	single nucleotide variant	not specified [RCV004444907]	Chr19:49857926 [GRCh38] Chr19:50361183 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.82G>A (p.Val28Met)	single nucleotide variant	not specified [RCV004444908]	Chr19:49851410 [GRCh38] Chr19:50354667 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.649C>G (p.Leu217Val)	single nucleotide variant	not specified [RCV004444904]	Chr19:49857065 [GRCh38] Chr19:50360322 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.748G>C (p.Val250Leu)	single nucleotide variant	not specified [RCV004444906]	Chr19:49857726 [GRCh38] Chr19:50360983 [GRCh37] Chr19:19q13.33	uncertain significance
NC_000019.9:g.(?_49713446)_(50413064_?)dup	duplication	Developmental and epileptic encephalopathy, 12 [RCV004581120]	Chr19:49713446..50413064 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.731G>A (p.Gly244Asp)	single nucleotide variant	not specified [RCV004662496]	Chr19:49857709 [GRCh38] Chr19:50360966 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.1164C>A (p.Asn388Lys)	single nucleotide variant	not specified [RCV004662495]	Chr19:49860108 [GRCh38] Chr19:50363365 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.23C>T (p.Pro8Leu)	single nucleotide variant	not specified [RCV004666881]	Chr19:49851351 [GRCh38] Chr19:50354608 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.968G>A (p.Arg323His)	single nucleotide variant	not specified [RCV004662494]	Chr19:49858580 [GRCh38] Chr19:50361837 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.1073C>T (p.Ser358Leu)	single nucleotide variant	not specified [RCV004666880]	Chr19:49860017 [GRCh38] Chr19:50363274 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.118A>G (p.Ser40Gly)	single nucleotide variant	not specified [RCV004853841]	Chr19:49851446 [GRCh38] Chr19:50354703 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.1171C>T (p.Arg391Trp)	single nucleotide variant	not specified [RCV004216841]	Chr19:49860115 [GRCh38] Chr19:50363372 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.127G>T (p.Gly43Cys)	single nucleotide variant	not specified [RCV004270923]	Chr19:49851455 [GRCh38] Chr19:50354712 [GRCh37] Chr19:19q13.33	uncertain significance
NC_000019.9:g.(?_50331686)_(50367680_?)del	deletion	Developmental and epileptic encephalopathy, 12 [RCV004581119]	Chr19:50331686..50367680 [GRCh37] Chr19:19q13.33	pathogenic
NM_001394010.1(PTOV1):c.20C>A (p.Ala7Asp)	single nucleotide variant	not specified [RCV004853835]	Chr19:49851348 [GRCh38] Chr19:50354605 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.1085G>A (p.Arg362His)	single nucleotide variant	not specified [RCV004853836]	Chr19:49860029 [GRCh38] Chr19:50363286 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.700A>G (p.Thr234Ala)	single nucleotide variant	not specified [RCV004853837]	Chr19:49857116 [GRCh38] Chr19:50360373 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.1165G>C (p.Gly389Arg)	single nucleotide variant	not specified [RCV004853838]	Chr19:49860109 [GRCh38] Chr19:50363366 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.20C>T (p.Ala7Val)	single nucleotide variant	not specified [RCV004853839]	Chr19:49851348 [GRCh38] Chr19:50354605 [GRCh37] Chr19:19q13.33	uncertain significance
NM_001394010.1(PTOV1):c.396G>T (p.Glu132Asp)	single nucleotide variant	not specified [RCV004853840]	Chr19:49854834 [GRCh38] Chr19:50358091 [GRCh37] Chr19:19q13.33	uncertain significance

Predicted Target Of

	Summary Value
Count of predictions:	7505
Count of miRNA genes:	1079
Interacting mature miRNAs:	1392
Transcripts:	ENST00000221557, ENST00000391842, ENST00000594151, ENST00000594165, ENST00000594640, ENST00000595934, ENST00000596095, ENST00000596424, ENST00000597730, ENST00000597793, ENST00000598325, ENST00000598632, ENST00000599732, ENST00000600105, ENST00000600603, ENST00000600793, ENST00000601093, ENST00000601501, ENST00000601612, ENST00000601638, ENST00000601675, ENST00000602040
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1559110	SCL22_H	Serum cholesterol level QTL 22 (human)	3.59	0.000241	Lipid level	LDL cholesterol	19	31907594	57907594	Human
596968672	GWAS1088191_H	body mass index QTL GWAS1088191 (human)		1e-12	body mass index		19	49860328	49860329	Human
597396578	GWAS1492652_H	body mass index QTL GWAS1492652 (human)		1e-12	body mass index	body mass index (BMI) (CMO:0000105)	19	49860328	49860329	Human
1331657	COPD9_H	Chronic obstructive pulmonary disease QTL 9 (human)	1.94		Chronic airflow obstruction	post-bronchodilator FEV1	19	31021760	57021760	Human

WI-15464

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	19	50,363,874 - 50,363,987	UniSTS	GRCh37
GRCh37	3	120,026,862 - 120,026,975	UniSTS	GRCh37
Build 36	3	121,509,552 - 121,509,665	RGD	NCBI36
Celera	3	118,436,263 - 118,436,376	RGD
Celera	19	47,233,324 - 47,233,437	UniSTS
Cytogenetic Map	19	q13.33	UniSTS
Cytogenetic Map	3	q13.33	UniSTS
HuRef	3	117,402,687 - 117,402,800	UniSTS
HuRef	19	46,740,215 - 46,740,328	UniSTS
GeneMap99-GB4 RH Map	19	268.71	UniSTS
Whitehead-RH Map	19	347.1	UniSTS
NCBI RH Map	19	530.0	UniSTS

STS-AA018544

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	19	50,355,314 - 50,355,573	UniSTS	GRCh37
Build 36	19	55,047,126 - 55,047,385	RGD	NCBI36
Celera	19	47,224,764 - 47,225,023	RGD
Cytogenetic Map	19	q13.33	UniSTS
HuRef	19	46,731,656 - 46,731,915	UniSTS
GeneMap99-GB4 RH Map	19	272.69	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
1204	2439	2788	2253	4974	1726	2351	6	624	1951	465	2270	7306	6472	53	3734	1	852	1744	1617	175	1


RefSeq Transcripts	NG_050666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001305105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001305108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001364745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001364747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001364748	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001364749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001364750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001394010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_017432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_130963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_011527034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017026879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024451541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024451542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024451543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024451544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_047438940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_054321224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AA582677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC018766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF218026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF238381	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ617480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK057817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK294366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY358168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC015172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC042921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC065486	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BM677857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BU185109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DB496336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U79287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENST00000391842 ⟹ ENSP00000375717

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,851,159 - 49,860,742 (+)	Ensembl

Ensembl Acc Id:

ENST00000594151 ⟹ ENSP00000469839

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,850,735 - 49,857,782 (+)	Ensembl

Ensembl Acc Id:

ENST00000594165

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,850,999 - 49,858,637 (+)	Ensembl

Ensembl Acc Id:

ENST00000594640

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,851,953 - 49,855,065 (+)	Ensembl

Ensembl Acc Id:

ENST00000595934

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,856,504 - 49,858,383 (+)	Ensembl

Ensembl Acc Id:

ENST00000596095

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,851,403 - 49,852,696 (+)	Ensembl

Ensembl Acc Id:

ENST00000596424

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,857,043 - 49,858,863 (+)	Ensembl

Ensembl Acc Id:

ENST00000597730 ⟹ ENSP00000468905

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,860,139 - 49,860,742 (+)	Ensembl

Ensembl Acc Id:

ENST00000597793

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,856,136 - 49,860,740 (+)	Ensembl

Ensembl Acc Id:

ENST00000598325

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,851,020 - 49,860,725 (+)	Ensembl

Ensembl Acc Id:

ENST00000598632

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,850,837 - 49,855,644 (+)	Ensembl

Ensembl Acc Id:

ENST00000599732 ⟹ ENSP00000469128

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,851,191 - 49,860,744 (+)	Ensembl

Ensembl Acc Id:

ENST00000600105

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,855,055 - 49,858,114 (+)	Ensembl

Ensembl Acc Id:

ENST00000600603 ⟹ ENSP00000471458

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,850,754 - 49,860,739 (+)	Ensembl

Ensembl Acc Id:

ENST00000600793 ⟹ ENSP00000470439

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,854,406 - 49,857,121 (+)	Ensembl

Ensembl Acc Id:

ENST00000601093 ⟹ ENSP00000469838

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,857,907 - 49,860,742 (+)	Ensembl

Ensembl Acc Id:

ENST00000601501

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,850,989 - 49,855,146 (+)	Ensembl

Ensembl Acc Id:

ENST00000601612 ⟹ ENSP00000470007

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,850,735 - 49,860,740 (+)	Ensembl

Ensembl Acc Id:

ENST00000601638 ⟹ ENSP00000469541

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,850,828 - 49,860,713 (+)	Ensembl

Ensembl Acc Id:

ENST00000601675 ⟹ ENSP00000472816

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,851,225 - 49,860,740 (+)	Ensembl

Ensembl Acc Id:

ENST00000602040

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	19	49,851,387 - 49,854,997 (+)	Ensembl

RefSeq Acc Id:

NM_001305105 ⟹ NP_001292034

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,851,159 - 49,860,742 (+)	NCBI
CHM1_1	19	50,356,215 - 50,365,837 (+)	NCBI
T2T-CHM13v2.0	19	52,851,297 - 52,860,879 (+)	NCBI

Sequence:

show sequence

AGTGGTTCGGCCGCGGCGACCCCACTCCGGCGGCGCGTCCCCCGAGCTTGGTACGGCTCAGCCCGTCTCCCCCGAAGCCGCGCGCCCGCGCCCGCGCCCCTCAGTCGGTGGAGCCCGCAGCCCCCCTT
GTGGCCCGCGGCAGCTCCCCGCCCGCTCGGCCCGCGCCCGCCATGGTCCGTCCGCGCCGTGCCCCGTACCGCTCCGGCGCCGGGGGCCCCCTCGGGGGTCGCGGCCGCCCTCCGCGGCCCCTCGTGGT
GCGCGCCGTCCGCTCGCGCTCCTGGCCTGCCAGCCCCCGAGGCCCGCAGCCTCCGCGGATCCGGGCCCGCTCGGCCCCTCCCATGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCT
CCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAG
CTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTT
CCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCATCATGGGCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGG
TGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCT
GGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCATGGAGTGGCAGGAGCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGT
CTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCC
ACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGGCTGCGTGCACTTTTCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCA
GAGAAGAAAATCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGG
GATGGGGGGGTAGTGGTTACCCCGGGCTGGGCCCCTCCAGGAGTCACAGATGAGGCCCCCGCAGAGACTGGTGACACGCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGA
TGGTGTCCTGAGGCCTCCAAGGACGGTCCCCACCCCTCTACGTTTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

NM_001305108 ⟹ NP_001292037

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,850,705 - 49,860,742 (+)	NCBI
CHM1_1	19	50,355,830 - 50,365,837 (+)	NCBI
T2T-CHM13v2.0	19	52,850,843 - 52,860,879 (+)	NCBI

Sequence:

show sequence

ACCTCGCCACGTCACCGACTGCAAACCTTCAGCTGTCTCAGGCTCGGGTGCAATCCGTACCCTCAGTGGGTTCCCTTTCAGTGGGTTCCTTTGTCCCCAGGCCCATTATTCCGTCCTCCCCTCTTCCC
TGATGTATTTTGGCGCGGTCTCCTGGCTCTGCGGGCCCAGGGCTCCGGATGAGGTCTCCCGCCGTCCCGACCCCCGCAAGGGGCCAGCTTGGTGTCGCCTTCGTTCTTCTGCCACCCCATTCGGAAGG
TGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCTTGGAGCGGCGTCCTCGAGTGGC
AGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCTGATCATGCAGCTG
ATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCATCATGGGCAACGGCTTCGC
GGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTCGTCAGTGCCATCC
GGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCATGGAGTGGCAGGAGCCCAGGCCTGAG
CCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGCTGCTGACCACCCT
AGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCAGAAGAAAATCTTCATTGGCCTCATCCCCCA
TGACCAGGGCAACTTTGTCAACGGCATCCGGCGTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGGC
CCCTCCAGGAGTCACAGATGAGGCCCCCGCAGAGACTGTGCTTGGGAGCCTGTGGCCAGCAGCCCCCACTGCACCCCTGCCCCCAGGTGACACGCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGC
CCAGCAACATGGAGGATGGTGTCCTGAGGCCTCCAAGGACGGTCCCCACCCCTCTACGTTTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

NM_001364745 ⟹ NP_001351674

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,850,705 - 49,860,742 (+)	NCBI
T2T-CHM13v2.0	19	52,850,843 - 52,860,879 (+)	NCBI

Sequence:

show sequence

ACCTCGCCACGTCACCGACTGCAAACCTTCAGCTGTCTCAGGCTCGGGTGCAATCCGTACCCTCAGTGGGTTCCCTTTCAGTGGGTTCCTTTGTCCCCAGGCCCATTATTCCGTCCTCCCCTCTTCCC
TGATGTATTTTGGCGCGGTCTCCTGGCTCTGCGGGCCCAGGGCTCCGGATGAGGTCTCCCGCCGTCCCGACCCCCGCAAGGGGCCAGCTTGGTGTCGCCTTCGTTCTTCTGCCACCCCATTCGGAAGG
TGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCTTGGAGCGGCGTCCTCGAGTGGC
AGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCTGATCATGCAGCTG
ATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCATCATGGGCAACGGCTTCGC
GGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTCGTCAGTGCCATCC
GGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCATGGAGTGGCAGGAGCCCAGGCCTGAG
CCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGCTGCTGACCACCCT
AGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGGCTGCGTGCACTTTTCCTACAAAGCAT
CGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCAGAGAAGAAAATCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGTGTCATTGCCAACCAGCAGCAGGTC
CTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGGCCCCTCCAGGAGTCACAGATGAGGCCCCCGCAGAGACTGGTGACACGCTTCTGAGCAGG
GGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGATGGTGTCCTGAGGCCTCCAAGGACGGTCCCCACCCCTCTACGTTTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

NM_001364747 ⟹ NP_001351676

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,850,705 - 49,860,742 (+)	NCBI
T2T-CHM13v2.0	19	52,850,843 - 52,860,879 (+)	NCBI

Sequence:

show sequence

ACCTCGCCACGTCACCGACTGCAAACCTTCAGCTGTCTCAGGCTCGGGTGCAATCCGTACCCTCAGTGGGTTCCCTTTCAGTGGGTTCCTTTGTCCCCAGGCCCATTATTCCGTCCTCCCCTCTTCCC
TGATGTATTTTGGCGCGGTCTCCTGGCTCTGCGGGCCCAGGGCTCCGGATGAGGTCTCCCGCCGTCCCGACCCCCGCAAGGGGCCAGCTTGGTGTCGCCTTCGTTCTTCTGCCACCCCATTCGGTAGG
GGCTCCCGTTCCCGCCACGCCCCCTGAAGTTGTGGCTCGCGCGTCTTCCCAGGACTCCCCCGCGCCGGAGAGGCCCGCAGGACCGCCGAGCCCACACTCCGCTCCCGCCCGGGCCCCGCTCCCCCGCG
CCGCCTTGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCTTGGAGCGGC
GTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCT
GATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCATCATGG
GCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTC
GTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCATGGAGTGGCAGGA
GCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGC
TGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGGCTGCGTGCACTTT
TCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCAGAGAAGAAAATCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGTGTCATTGCCAA
CCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGGCCCCTCCAGGAGTCACAGATGAGGCCCCCGCAGAGACTGGTGACAC
GCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGATGGTGTCCTGAGGCCTCCAAGGACGGTCCCCACCCCTCTACGTTTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

NM_001364748 ⟹ NP_001351677

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,850,992 - 49,860,742 (+)	NCBI
T2T-CHM13v2.0	19	52,851,130 - 52,860,879 (+)	NCBI

Sequence:

show sequence

GTGGCTCGCGCGTCTTCCCAGGACTCCCCCGCGCCGGAGAGGCCCGCAGGACCGCCGAGCCCACACTCCGCTCCCGCCCGGGCCCCGCTCCCCCGCGCCGCCTTGGTACGCTCCGGCCACGCCCCCTC
GGACGCGCTTGGTACGCGCCGGGCTCCCCCGCTCGCCTCAGTGGTTCGGCCGCGGCGACCCCACTCCGGCGGCGCGTCCCCCGAGCTTGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGT
CCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGC
AAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCC
TGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCATCATGGGCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGT
GAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGG
ACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCATGGAGTGGCAGGAGCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCC
ACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAG
TTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGGCTGCGTGCACTTTTCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTC
TTCAGAGAAGAAAATCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAAC
GAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGGCCCCTCCAGGAGTCACAGATGAGGCCCCCGCAGAGACTGTGCTTGGGAGCCTGTGGCCAGCAGCCCCCACTGCACCCCTGCCCCCAGGTGACA
CGCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGATGGTGTCCTGAGGCCTCCAAGGACGGTCCCCACCCCTCTACGTTTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

NM_001364749 ⟹ NP_001351678

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,850,705 - 49,860,742 (+)	NCBI
T2T-CHM13v2.0	19	52,850,843 - 52,860,879 (+)	NCBI

Sequence:

show sequence

ACCTCGCCACGTCACCGACTGCAAACCTTCAGCTGTCTCAGGCTCGGGTGCAATCCGTACCCTCAGTGGGTTCCCTTTCAGTGGGTTCCTTTGTCCCCAGGCCCATTATTCCGTCCTCCCCTCTTCCC
TGATGTATTTTGGCGCGGTCTCCTGGCTCTGCGGGCCCAGGGCTCCGGATGAGGTCTCCCGCCGTCCCGACCCCCGCAAGGGGCCAGCTTGGTGTCGCCTTCGTTCTTCTGCCACCCCATTCGGTAGG
GGCTCCCGTTCCCGCCACGCCCCCTGAAGTTGTGGCTCGCGCGTCTTCCCAGGACTCCCCCGCGCCGGAGAGGCCCGCAGGACCGCCGAGCCCACACTCCGCTCCCGCCCGGGCCCCGCTCCCCCGCG
CCGCCTTGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCTTGGAGCGGC
GTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCT
GATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCATCATGG
GCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTC
GTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCATGGAGTGGCAGGA
GCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGC
TGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGGCTGCGTGCACTTT
TCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCAGAGAAGAAAATCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGCGTGTCATTGCCAA
CCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGGCCCCTCCAGGAGTCACAGATGAGGCCCCCGCAGAGACTGTGCTTGG
GAGCCTGTGGCCAGCAGCCCCCACTGCACCCCTGCCCCCAGGTGACACGCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGATGGTGTCCTGAGGCCTCCAAGGACGGTCC
CCACCCCTCTACGTTTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

NM_001364750 ⟹ NP_001351679

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,850,992 - 49,860,742 (+)	NCBI
T2T-CHM13v2.0	19	52,851,130 - 52,860,879 (+)	NCBI

Sequence:

show sequence

GTGGCTCGCGCGTCTTCCCAGGACTCCCCCGCGCCGGAGAGGCCCGCAGGACCGCCGAGCCCAC
ACTCCGCTCCCGCCCGGGCCCCGCTCCCCCGCGCCGCCTTGGTACGCTCCGGCCACGCCCCCTCGGACGCGCTTGGTACGCGCCGGGCTCCCCCGCTCGCCTCAGTGGTTCGGCCGCGGCGACCCCAC
TCCGGCGGCGCGTCCCCCGAGCTTGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGC
TGCTGGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGAC
CAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGG
GCTCTGCCGCATCATGGGCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCT
ACGACCAGAGCGGCTTCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGT
GTCATGGAGTGGCAGGAGCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCA
GCTCATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCG
CCGGCTGCGTGCACTTTTCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCAGAGAAGAAAATCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATC
CGGCGTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGGCCCCTCCAGGAGTCACAGATGAGGCCCCC
GCAGAGACTGGTGACACGCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGATGGTGTCCTGAGGCCTCCAAGGACGGTCCCCACCCCTCTACGTTTCCCCAATAAAGCCTT
TTAAAAACCTG

hide sequence

RefSeq Acc Id:

NM_001394010 ⟹ NP_001380939

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,851,159 - 49,860,742 (+)	NCBI
T2T-CHM13v2.0	19	52,851,297 - 52,860,879 (+)	NCBI

Sequence:

show sequence

AGTGGTTCGGCCGCGGCGACCCCACTCCGGCGGCGCGTCCCCCGAGCTTGGTACGGCTCAGCCC
GTCTCCCCCGAAGCCGCGCGCCCGCGCCCGCGCCCCTCAGTCGGTGGAGCCCGCAGCCCCCCTTGTGGCCCGCGGCAGCTCCCCGCCCGCTCGGCCCGCGCCCGCCATGGTCCGTCCGCGCCGTGCCC
CGTACCGCTCCGGCGCCGGGGGCCCCCTCGGGGGTCGCGGCCGCCCTCCGCGGCCCCTCGTGGTGCGCGCCGTCCGCTCGCGCTCCTGGCCTGCCAGCCCCCGAGGCCCGCAGCCTCCGCGGATCCGG
GCCCGCTCGGCCCCTCCCATGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCT
GGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGT
GGCCGCAGAAGCTGATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTC
TGCCGCATCATGGGCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGA
CCAGAGCGGCTTCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCA
TGGAGTGGCAGGAGCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTC
ATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGG
CTGCGTGCACTTTTCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCAGAGAAGAAAATCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGC
GTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGGCCCCTCCAGGAGTCACAGATGAGGCCCCCGCAG
AGACTGGTGAGTGGTGACCCTGTCATGTACAGGAGGGACCCTGGGGCATGTGGGGGGGGTGGGGTTGGGAAAGAAGCAGGGCGACCTTGGCCTTGGGGAGAGCAGAGCAGAGGGAGAGGCAGCAGTCC
CAGCGGTCCTAGGCTGTCGGGAAACTGCAGCCCAGCCTCAGGGCCATGGGAGGTGGTATCCAGGCCTGGGTGGGGCCAGGCCTCTGCTCACAGGGATGTGGGGTCAGTGCTTGGGAGCCTGTGGCCAG
CAGCCCCCACTGCACCCCTGCCCCCAGGTGACACGCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGATGGTGTCCTGAGGCCTCCAAGGACGGTCCCCACCCCTCTACGT
TTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

NM_017432 ⟹ NP_059128

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,851,159 - 49,860,742 (+)	NCBI
GRCh37	19	50,353,667 - 50,363,999 (+)	NCBI
Build 36	19	55,046,228 - 55,055,811 (+)	NCBI Archive
HuRef	19	46,730,759 - 46,740,340 (+)	ENTREZGENE
CHM1_1	19	50,356,215 - 50,365,837 (+)	NCBI
T2T-CHM13v2.0	19	52,851,297 - 52,860,879 (+)	NCBI

Sequence:

show sequence

AGTGGTTCGGCCGCGGCGACCCCACTCCGGCGGCGCGTCCCCCGAGCTTGGTACGGCTCAGCCC
GTCTCCCCCGAAGCCGCGCGCCCGCGCCCGCGCCCCTCAGTCGGTGGAGCCCGCAGCCCCCCTTGTGGCCCGCGGCAGCTCCCCGCCCGCTCGGCCCGCGCCCGCCATGGTCCGTCCGCGCCGTGCCC
CGTACCGCTCCGGCGCCGGGGGCCCCCTCGGGGGTCGCGGCCGCCCTCCGCGGCCCCTCGTGGTGCGCGCCGTCCGCTCGCGCTCCTGGCCTGCCAGCCCCCGAGGCCCGCAGCCTCCGCGGATCCGG
GCCCGCTCGGCCCCTCCCATGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGTCTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCT
GGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGCCTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGT
GGCCGCAGAAGCTGATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCCACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTC
TGCCGCATCATGGGCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCGTCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGA
CCAGAGCGGCTTCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCAGATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCA
TGGAGTGGCAGGAGCCCAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACCGAGCAGTGGCCAAGGAAGCTGTACATGCAGCTC
ATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAGCCTGTGCCGGATCATGGACAATGGCTTCGCCGG
CTGCGTGCACTTTTCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCAGAGAAGAAAATCTTCATTGGCCTCATCCCCCATGACCAGGGCAACTTTGTCAACGGCATCCGGC
GTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGGCCCCTCCAGGAGTCACAGATGAGGCCCCCGCAG
AGACTGTGCTTGGGAGCCTGTGGCCAGCAGCCCCCACTGCACCCCTGCCCCCAGGTGACACGCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGATGGTGTCCTGAGGCCT
CCAAGGACGGTCCCCACCCCTCTACGTTTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

NR_130963

RefSeq Status:

REVIEWED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,850,705 - 49,860,742 (+)	NCBI
CHM1_1	19	50,355,830 - 50,365,837 (+)	NCBI
T2T-CHM13v2.0	19	52,850,843 - 52,860,879 (+)	NCBI

Sequence:

show sequence

ACCTCGCCACGTCACCGACTGCAAACCTTCAGCTGTCTCAGGCTCGGGTGCAATCCGTACCCTC
AGTGGGTTCCCTTTCAGTGGGTTCCTTTGTCCCCAGGCCCATTATTCCGTCCTCCCCTCTTCCCTGATGTATTTTGGCGCGGTCTCCTGGCTCTGCGGGCCCAGGGCTCCGGATGAGGTCTCCCGCCG
TCCCGACCCCCGCAAGGGGCCAGCTTGGTGTCGCCTTCGTTCTTCTGCCACCCCATTCGGAAGGTGCTCGGGTCTTCGGGGCACTGGGTCCCATCGGTCCCTCCTCACCTGGGCTCACCCTCGGGGGT
CTGGCCGTGAGCGAGCACCGGCTCAGCAACAAGCTGCTGGCTTGGAGCGGCGTCCTCGAGTGGCAGGAGAAGCGCAGACCCTACTCTGACTCCACTGCAAAGCTGAAGCGGACCCTGCCCTGCCAAGC
CTACGTGAACCAAGGCGAGAACCTGGAGACCGACCAGTGGCCGCAGAAGCTGATCATGCAGCTGATCCCTCAGCAGCTGCTGACCACCCTGGGCCCCCTGTTCCGGAACTCCCAGTTGGCACAGTTCC
ACTTCACCAACAGAGACTGCGACTCGCTCAAGGGGCTCTGCCGCATCATGGGCAACGGCTTCGCGGGCTGCATGCTGTTCCCCCACATCTCCCCCTGTGAGGTGCGCGTGCTCATGCTCCTGTACTCG
TCCAAGAAGAAGATCTTCATGGGCCTCATCCCCTACGACCAGAGCGGCTTCGTCAGTGCCATCCGGCAGGTCATCACCACCCGCAAGCAGGCAGTGGGACCTGGTGGTGTCAACTCAGGCCCAGTCCA
GATCGTCAACAACAAGTTTCTGGCATGGAGTGGTGTCATGGAGTGGCAGGAGGCCTGAGCCCAACAGTCGGTCCAAGAGGTGGCTGCCATCCCACGTCTACGTGAACCAGGGGGAGATCCTGAGGACC
GAGCAGTGGCCAAGGAAGCTGTACATGCAGCTCATCCCGCAGCAGCTGCTGACCACCCTAGTGCCGCTGTTCCGGAACTCGCGCCTGGTCCAGTTCCACTTCACCAAGGACCTGGAGACACTGAAGAG
CCTGTGCCGGATCATGGACAATGGCTTCGCCGGCTGCGTGCACTTTTCCTACAAAGCATCGTGTGAGATCCGCGTGCTTATGCTCCTGTACTCTTCAGAGAAGAAAATCTTCATTGGCCTCATCCCCC
ATGACCAGGGCAACTTTGTCAACGGCATCCGGCGTGTCATTGCCAACCAGCAGCAGGTCCTGCAGCGGAACCTGGAGCAGGAGCAACAGCAACGAGGGATGGGGGGGTAGTGGTTACCCCGGGCTGGG
CCCCTCCAGGAGTCACAGATGAGGCCCCCGCAGAGACTGGTGACACGCTTCTGAGCAGGGGCCCCTGGGGACTTCAACTGCCCAGCAACATGGAGGATGGTGTCCTGAGGCCTCCAAGGACGGTCCCC
ACCCCTCTACGTTTCCCCAATAAAGCCTTTTAAAAACCTG

hide sequence

RefSeq Acc Id:

XM_047438940 ⟹ XP_047294896

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,850,705 - 49,860,059 (+)	NCBI

RefSeq Acc Id:

XM_054321224 ⟹ XP_054177199

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
T2T-CHM13v2.0	19	52,850,843 - 52,860,196 (+)	NCBI


Protein RefSeqs	NP_001292034	(Get FASTA)	NCBI Sequence Viewer
	NP_001292037	(Get FASTA)	NCBI Sequence Viewer
	NP_001351674	(Get FASTA)	NCBI Sequence Viewer
	NP_001351676	(Get FASTA)	NCBI Sequence Viewer
	NP_001351677	(Get FASTA)	NCBI Sequence Viewer
	NP_001351678	(Get FASTA)	NCBI Sequence Viewer
	NP_001351679	(Get FASTA)	NCBI Sequence Viewer
	NP_001380939	(Get FASTA)	NCBI Sequence Viewer
	NP_059128	(Get FASTA)	NCBI Sequence Viewer
	XP_047294896	(Get FASTA)	NCBI Sequence Viewer
	XP_054177199	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAF70635	(Get FASTA)	NCBI Sequence Viewer
	AAG17268	(Get FASTA)	NCBI Sequence Viewer
	AAH15172	(Get FASTA)	NCBI Sequence Viewer
	AAH42921	(Get FASTA)	NCBI Sequence Viewer
	AAQ88535	(Get FASTA)	NCBI Sequence Viewer
	BAG57628	(Get FASTA)	NCBI Sequence Viewer
	CAE84582	(Get FASTA)	NCBI Sequence Viewer
	EAW52552	(Get FASTA)	NCBI Sequence Viewer
	EAW52553	(Get FASTA)	NCBI Sequence Viewer
	EAW52554	(Get FASTA)	NCBI Sequence Viewer
	EAW52555	(Get FASTA)	NCBI Sequence Viewer
	EAW52556	(Get FASTA)	NCBI Sequence Viewer
	EAW52557	(Get FASTA)	NCBI Sequence Viewer
	EAW52558	(Get FASTA)	NCBI Sequence Viewer
	EAW52559	(Get FASTA)	NCBI Sequence Viewer
	EAW52560	(Get FASTA)	NCBI Sequence Viewer
	EAW52561	(Get FASTA)	NCBI Sequence Viewer
	EAW52562	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000375717
	ENSP00000375717.1
	ENSP00000469128
	ENSP00000469128.1
	ENSP00000469541
	ENSP00000471458
	ENSP00000472816
	ENSP00000472816.1
GenBank Protein	Q86YD1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_059128 ⟸ NM_017432
- Peptide Label:	isoform 1
- UniProtKB:	Q9HBN4 (UniProtKB/Swiss-Prot), Q96BU3 (UniProtKB/Swiss-Prot), Q6UXX7 (UniProtKB/Swiss-Prot), Q9NYL1 (UniProtKB/Swiss-Prot), Q86YD1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MVRPRRAPYRSGAGGPLGGRGRPPRPLVVRAVRSRSWPASPRGPQPPRIRARSAPPMEGARVFGALGPIGPSSPGLTLGGLAVSEHRLSNKLLAWSGVLEWQEKRRPYSDSTAKLKRTLPCQAYVNQG ENLETDQWPQKLIMQLIPQQLLTTLGPLFRNSQLAQFHFTNRDCDSLKGLCRIMGNGFAGCMLFPHISPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVSAIRQVITTRKQAVGPGGVNSGPVQIVNNK FLAWSGVMEWQEPRPEPNSRSKRWLPSHVYVNQGEILRTEQWPRKLYMQLIPQQLLTTLVPLFRNSRLVQFHFTKDLETLKSLCRIMDNGFAGCVHFSYKASCEIRVLMLLYSSEKKIFIGLIPHDQG NFVNGIRRVIANQQQVLQRNLEQEQQQRGMGG hide sequence

RefSeq Acc Id:	NP_001292037 ⟸ NM_001305108
- Peptide Label:	isoform 2
- UniProtKB:	A0A0C4DGR2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSPAVPTPARGQLGVAFVLLPPHSEGARVFGALGPIGPSSPGLTLGGLAVSEHRLSNKLLAWS GVLEWQEKRRPYSDSTAKLKRTLPCQAYVNQGENLETDQWPQKLIMQLIPQQLLTTLGPLFRNSQLAQFHFTNRDCDSLKGLCRIMGNGFAGCMLFPHISPCEVRVLMLLYSSKKKIFMGLIPYDQSG FVSAIRQVITTRKQAVGPGGVNSGPVQIVNNKFLAWSGVMEWQEPRPEPNSRSKRWLPSHVYVNQGEILRTEQWPRKLYMQLIPQQLLTTLVPLFRNSRLVQFHFTKDLETLKSLCRIMDNGFRRKSS LASSPMTRATLSTASGVSLPTSSRSCSGTWSRSNSNEGWGGSGYPGLGPSRSHR hide sequence

RefSeq Acc Id:	NP_001292034 ⟸ NM_001305105
- Peptide Label:	isoform 1
- UniProtKB:	Q9HBN4 (UniProtKB/Swiss-Prot), Q96BU3 (UniProtKB/Swiss-Prot), Q6UXX7 (UniProtKB/Swiss-Prot), Q9NYL1 (UniProtKB/Swiss-Prot), Q86YD1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MVRPRRAPYRSGAGGPLGGRGRPPRPLVVRAVRSRSWPASPRGPQPPRIRARSAPPMEGARVFG ALGPIGPSSPGLTLGGLAVSEHRLSNKLLAWSGVLEWQEKRRPYSDSTAKLKRTLPCQAYVNQGENLETDQWPQKLIMQLIPQQLLTTLGPLFRNSQLAQFHFTNRDCDSLKGLCRIMGNGFAGCMLF PHISPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVSAIRQVITTRKQAVGPGGVNSGPVQIVNNKFLAWSGVMEWQEPRPEPNSRSKRWLPSHVYVNQGEILRTEQWPRKLYMQLIPQQLLTTLVPLFR NSRLVQFHFTKDLETLKSLCRIMDNGFAGCVHFSYKASCEIRVLMLLYSSEKKIFIGLIPHDQGNFVNGIRRVIANQQQVLQRNLEQEQQQRGMGG hide sequence

RefSeq Acc Id:	NP_001351678 ⟸ NM_001364749
- Peptide Label:	isoform 4

RefSeq Acc Id:	NP_001351676 ⟸ NM_001364747
- Peptide Label:	isoform 4

Protein Domains

Mediator complex subunit Med25 PTOV

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q86YD1-F1-model_v2	AlphaFold	Q86YD1	1-416	view protein structure

RGD ID:

13205187

Promoter ID:

EPDNEW_H26174

Type:

initiation region

Name:

PTOV1_1

Description:

prostate tumor overexpressed 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	19	49,851,182 - 49,851,242	EPDNEW

RGD ID:

6795113

Promoter ID:

HG_KWN:30580

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, K562, Lymphoblastoid, NB4

Transcripts:

ENST00000221557, NM_017432, UC002PPZ.2, UC002PQA.1, UC002PQB.2, UC002PQC.1, UC002PQD.2, UC002PQE.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	19	55,045,056 - 55,046,202 (+)	MPROMDB

RGD ID:

6811720

Promoter ID:

HG_ACW:42301

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

K562

Transcripts:

PTOV1.LAPR07

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	19	55,051,216 - 55,051,967 (+)	MPROMDB

Database	Acc Id	Source(s)
COSMIC	PTOV1	COSMIC
Ensembl Genes	ENSG00000104960	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENST00000391842	ENTREZGENE
	ENST00000391842.6	UniProtKB/Swiss-Prot
	ENST00000598325	ENTREZGENE
	ENST00000599732	ENTREZGENE
	ENST00000599732.5	UniProtKB/Swiss-Prot
	ENST00000600603	ENTREZGENE
	ENST00000601612	ENTREZGENE
	ENST00000601638	ENTREZGENE
	ENST00000601675	ENTREZGENE
	ENST00000601675.5	UniProtKB/Swiss-Prot
Gene3D-CATH	2.40.290.30	UniProtKB/Swiss-Prot
GTEx	ENSG00000104960	GTEx
HGNC ID	HGNC:9632	ENTREZGENE
Human Proteome Map	PTOV1	Human Proteome Map
InterPro	Med25_PTOV	UniProtKB/Swiss-Prot
	PTOV_dom_sf	UniProtKB/Swiss-Prot
KEGG Report	hsa:53635	UniProtKB/Swiss-Prot
NCBI Gene	53635	ENTREZGENE
OMIM	610195	OMIM
PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25	UniProtKB/Swiss-Prot
	PTHR12433	UniProtKB/Swiss-Prot
Pfam	Med25	UniProtKB/Swiss-Prot
PharmGKB	PA33976	PharmGKB
UniProt	A0A0C4DGR2	ENTREZGENE, UniProtKB/TrEMBL
	B4DG17_HUMAN	UniProtKB/TrEMBL
	M0QX53_HUMAN	UniProtKB/TrEMBL
	M0QY25	ENTREZGENE, UniProtKB/TrEMBL
	M0QYH6_HUMAN	UniProtKB/TrEMBL
	M0QYH7_HUMAN	UniProtKB/TrEMBL
	M0QYQ4_HUMAN	UniProtKB/TrEMBL
	M0QZB9_HUMAN	UniProtKB/TrEMBL
	PTOV1_HUMAN	UniProtKB/Swiss-Prot
	Q6UXX7	ENTREZGENE
	Q86YD1	ENTREZGENE
	Q96BU3	ENTREZGENE
	Q9HBN4	ENTREZGENE
	Q9NYL1	ENTREZGENE
UniProt Secondary	Q6UXX7	UniProtKB/Swiss-Prot
	Q96BU3	UniProtKB/Swiss-Prot
	Q9HBN4	UniProtKB/Swiss-Prot
	Q9NYL1	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-01-29	PTOV1	PTOV1 extended AT-hook containing adaptor protein		PTOV1, extended AT-hook containing adaptor protein	Symbol and/or name change	5135510	APPROVED
2018-11-29	PTOV1	PTOV1, extended AT-hook containing adaptor protein		prostate tumor overexpressed 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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