Arhgap24 (Rho GTPase activating protein 24) - Rat Genome Database

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Gene: Arhgap24 (Rho GTPase activating protein 24) Mus musculus
Analyze
Symbol: Arhgap24
Name: Rho GTPase activating protein 24
RGD ID: 1315416
MGI Page MGI
Description: Enables GTPase activator activity. Acts upstream of or within several processes, including activation of GTPase activity; negative regulation of Rac protein signal transduction; and negative regulation of ruffle assembly. Located in focal adhesion. Is expressed in several structures, including axial skeleton; central nervous system; cranium; jaw; and metanephros. Orthologous to human ARHGAP24 (Rho GTPase activating protein 24).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 0610025G21Rik; MGC38749; rho GTPase-activating protein 24; rho-type GTPase-activating protein 24
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395102,355,043 - 103,053,743 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5102,629,257 - 103,045,803 (+)EnsemblGRCm39 Ensembl
GRCm385102,207,198 - 102,905,035 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5102,481,391 - 102,897,937 (+)EnsemblGRCm38mm10GRCm38
MGSCv375102,910,410 - 103,326,956 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365102,721,693 - 103,138,131 (+)NCBIMGSCv36mm8
Celera599,802,537 - 100,211,871 (+)NCBICelera
Cytogenetic Map5E5NCBI
cM Map549.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Arhgap24Mousefocal segmental glomerulosclerosis  ISOARHGAP24 (Homo sapiens)8554872ClinVar Annotator: match by term: Focal segmental glomerulosclerosisClinVar 
Arhgap24Mousefocal segmental glomerulosclerosis 1  ISOARHGAP24 (Homo sapiens)8554872ClinVar Annotator: match by term: Focal segmental glomerulosclerosis 1ClinVar 
Arhgap24Mousenephrotic syndrome  ISOARHGAP24 (Homo sapiens)8554872ClinVar Annotator: match by term: Nephrotic syndromeClinVar 

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Arhgap24Mouse(+)-schisandrin B multiple interactionsISOArhgap24 (Rattus norvegicus)6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in decreased expression of ARHGAP24 mRNA]CTDPMID:31150632
Arhgap24Mouse(-)-epigallocatechin 3-gallate multiple interactionsISOARHGAP24 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of ARHGAP24 mRNACTDPMID:22079256
Arhgap24Mouse1,2-dimethylhydrazine decreases expressionEXP 64804641 and 2-Dimethylhydrazine results in decreased expression of ARHGAP24 mRNACTDPMID:22206623
Arhgap24Mouse17beta-estradiol increases expressionEXP 6480464Estradiol results in increased expression of ARHGAP24 mRNACTDPMID:39298647
Arhgap24Mouse17beta-estradiol decreases expressionISOARHGAP24 (Homo sapiens)6480464Estradiol results in decreased expression of ARHGAP24 mRNACTDPMID:31614463
Arhgap24Mouse2,3',4,4',5-Pentachlorobiphenyl increases expressionEXP 64804642 more ...CTDPMID:31388691
Arhgap24Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionISOARHGAP24 (Homo sapiens)6480464Tetrachlorodibenzodioxin affects the expression of ARHGAP24 mRNACTDPMID:22298810
Arhgap24Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ARHGAP24 mRNACTDPMID:26290441
Arhgap24Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOArhgap24 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of ARHGAP24 mRNACTDPMID:21215274 more ...
Arhgap24Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of ARHGAP24 mRNACTDPMID:21570461
Arhgap24Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionISOArhgap24 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin affects the expression of ARHGAP24 mRNACTDPMID:22298810
Arhgap24Mouse2,4,6-trinitrobenzenesulfonic acid multiple interactionsEXP 6480464Curcumin inhibits the reaction [Trinitrobenzenesulfonic Acid results in decreased expression of ARHGAP24 mRNA]CTDPMID:18200517
Arhgap24Mouse2,4,6-trinitrobenzenesulfonic acid decreases expressionEXP 6480464Trinitrobenzenesulfonic Acid results in decreased expression of ARHGAP24 mRNACTDPMID:18200517
Arhgap24Mouse2,4-dinitrotoluene affects expressionISOArhgap24 (Rattus norvegicus)64804642 and 4-dinitrotoluene affects the expression of ARHGAP24 mRNACTDPMID:21346803
Arhgap24Mouse4,4'-diaminodiphenylmethane decreases expressionEXP 64804644 and 4'-diaminodiphenylmethane results in decreased expression of ARHGAP24 mRNACTDPMID:18648102
Arhgap24Mouse4,4'-sulfonyldiphenol increases expressionEXP 6480464bisphenol S results in increased expression of ARHGAP24 mRNACTDPMID:30951980 and PMID:39298647
Arhgap24Mouse4,4'-sulfonyldiphenol affects methylationEXP 6480464bisphenol S affects the methylation of ARHGAP24 geneCTDPMID:31683443
Arhgap24Mouse4,4'-sulfonyldiphenol decreases methylationEXP 6480464bisphenol S results in decreased methylation of ARHGAP24 promoterCTDPMID:33297965
Arhgap24Mouse4-hydroxyphenyl retinamide decreases expressionEXP 6480464Fenretinide results in decreased expression of ARHGAP24 mRNACTDPMID:28973697
Arhgap24Mouseaflatoxin B1 decreases methylationISOARHGAP24 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of ARHGAP24 geneCTDPMID:27153756

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Biological Process
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Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Arhgap24Mouseadherens junction located_inIEAUniProtKB-SubCell:SL-00092290270 UniProtGO_REF:0000044
Arhgap24Mousecell projection located_inIEAUniProtKB-SubCell:SL-02802290270 UniProtGO_REF:0000044
Arhgap24Mousecytoplasm located_inIEAUniProtKB-KW:KW-09632290270 UniProtGO_REF:0000043
Arhgap24Mousecytoskeleton located_inIEAUniProtKB-SubCell:SL-00902290270 UniProtGO_REF:0000044
Arhgap24Mousefocal adhesion located_inIDA 2290270 PMID:21911940MGIPMID:21911940
Arhgap24Mousefocal adhesion is_active_inIBAPANTHER:PTN002689802 and MGI:19226472290270 GO_CentralGO_REF:0000033

Molecular Function

  

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Arhgap24Mouseabnormal eye anterior chamber depth  IEA 5509061 MGI 
Arhgap24Mousedecreased locomotor activity  IEA 5509061 MGI 
Arhgap24Mouseincreased heart left ventricle size  IEA 5509061 MGI 

#
Reference Title
Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15254788   PMID:15489334   PMID:16141072   PMID:16141073   PMID:19268448   PMID:21267068   PMID:21677750   PMID:21873635  
PMID:21911940   PMID:21931791   PMID:27113764   PMID:28671696   PMID:32325033   PMID:34932949   PMID:38355793  



Arhgap24
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395102,355,043 - 103,053,743 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5102,629,257 - 103,045,803 (+)EnsemblGRCm39 Ensembl
GRCm385102,207,198 - 102,905,035 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5102,481,391 - 102,897,937 (+)EnsemblGRCm38mm10GRCm38
MGSCv375102,910,410 - 103,326,956 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365102,721,693 - 103,138,131 (+)NCBIMGSCv36mm8
Celera599,802,537 - 100,211,871 (+)NCBICelera
Cytogenetic Map5E5NCBI
cM Map549.53NCBI
ARHGAP24
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38485,475,150 - 86,002,666 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl485,475,150 - 86,002,668 (+)EnsemblGRCh38hg38GRCh38
GRCh37486,396,303 - 86,923,819 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36486,615,308 - 87,142,847 (+)NCBINCBI36Build 36hg18NCBI36
Build 34487,208,604 - 87,281,000NCBI
Celera483,686,557 - 84,212,966 (+)NCBICelera
Cytogenetic Map4q21.23-q21.3NCBI
HuRef482,138,172 - 82,667,459 (+)NCBIHuRef
CHM1_1486,373,874 - 86,900,523 (+)NCBICHM1_1
T2T-CHM13v2.0488,804,774 - 89,332,147 (+)NCBIT2T-CHM13v2.0
Arhgap24
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8147,105,200 - 7,488,437 (-)NCBIGRCr8
mRatBN7.2146,800,624 - 7,183,877 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl146,800,631 - 7,183,823 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx146,766,928 - 7,156,727 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0148,067,143 - 8,456,916 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0146,758,042 - 7,147,858 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0148,383,211 - 8,600,526 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl148,383,214 - 8,600,512 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0148,355,349 - 8,737,158 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4148,026,238 - 8,075,033 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1148,026,237 - 8,075,033 (-)NCBI
Celera146,934,558 - 6,983,207 (-)NCBICelera
Cytogenetic Map14p22NCBI
Arhgap24
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554743,786,264 - 4,224,778 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554743,786,264 - 4,224,778 (-)NCBIChiLan1.0ChiLan1.0
ARHGAP24
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2383,501,686 - 84,030,380 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1483,764,207 - 84,305,147 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0477,788,074 - 78,316,357 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1488,519,537 - 89,045,861 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl488,619,296 - 89,045,861 (+)Ensemblpanpan1.1panPan2
ARHGAP24
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1328,838,567 - 9,574,712 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl329,073,260 - 9,579,472 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3232,310,358 - 33,048,808 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0328,859,937 - 9,596,675 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl329,093,884 - 9,596,675 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1328,939,424 - 9,687,331 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0328,800,955 - 9,534,275 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03230,414,857 - 31,158,096 (-)NCBIUU_Cfam_GSD_1.0
Arhgap24
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244052852,769,726 - 3,161,676 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936896145,297 - 214,794 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493689657,250 - 213,918 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGAP24
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8132,761,720 - 133,242,014 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18132,761,967 - 133,506,065 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28142,149,547 - 142,170,076 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGAP24
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1733,635,577 - 34,384,835 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl734,316,100 - 34,387,205 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603712,522,322 - 13,038,871 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arhgap24
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248722,036,937 - 2,442,603 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248721,950,058 - 2,442,532 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Arhgap24
39917 total Variants

Predicted Target Of
Summary Value
Count of predictions:2860
Count of miRNA genes:530
Interacting mature miRNAs:623
Transcripts:ENSMUST00000070000, ENSMUST00000073302, ENSMUST00000094559, ENSMUST00000112852, ENSMUST00000112853, ENSMUST00000112854, ENSMUST00000126125, ENSMUST00000130222
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 57 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10045978Tir10_mtrypanosome infection response 10 (mouse)Not determined598019649114021986Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
25314310Syncl4_msynaptonemal complex length 4 (mouse)5103047866115538059Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse

1 to 10 of 57 rows
D5Mit364  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385102,786,802 - 102,786,904UniSTSGRCm38
MGSCv375103,215,821 - 103,215,923UniSTSGRCm37
Celera5100,100,747 - 100,100,849UniSTS
Cytogenetic Map5E4UniSTS
cM Map554.0UniSTS
Whitehead Genetic537.2UniSTS
Whitehead/MRC_RH51211.81UniSTS
B501  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385102,889,149 - 102,889,302UniSTSGRCm38
MGSCv375103,318,168 - 103,318,321UniSTSGRCm37
Celera5100,203,083 - 100,203,236UniSTS
Cytogenetic Map5E4UniSTS
cM Map554.0UniSTS
Whitehead Genetic537.2UniSTS
D5Mit64.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385102,889,256 - 102,889,460UniSTSGRCm38
MGSCv375103,318,275 - 103,318,479UniSTSGRCm37
Celera5100,203,190 - 100,203,394UniSTS
Cytogenetic Map5E4UniSTS
cM Map554.0UniSTS
cM Map5 UniSTS
Whitehead Genetic537.2UniSTS
RH118293  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385102,584,586 - 102,584,768UniSTSGRCm38
MGSCv375103,013,605 - 103,013,787UniSTSGRCm37
Celera599,907,518 - 99,907,700UniSTS
Cytogenetic Map5E4UniSTS
Whitehead/MRC_RH51207.19UniSTS
RH134569  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm385102,897,472 - 102,897,664UniSTSGRCm38
MGSCv375103,326,491 - 103,326,683UniSTSGRCm37
Celera5100,211,406 - 100,211,598UniSTS
Cytogenetic Map5E4UniSTS






1 to 30 of 30 rows
RefSeq Transcripts NM_001286468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_146161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006534887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006534888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006534891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006534892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011249434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA221552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC111130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC125252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC139035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC158944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK134817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB843608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 30 rows

Ensembl Acc Id: ENSMUST00000070000   ⟹   ENSMUSP00000070048
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5102,992,873 - 103,045,803 (+)Ensembl
GRCm38.p6 Ensembl5102,845,007 - 102,897,937 (+)Ensembl
Ensembl Acc Id: ENSMUST00000073302   ⟹   ENSMUSP00000073028
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5102,629,257 - 103,045,802 (+)Ensembl
GRCm38.p6 Ensembl5102,481,391 - 102,897,936 (+)Ensembl
Ensembl Acc Id: ENSMUST00000094559   ⟹   ENSMUSP00000092138
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5102,629,257 - 103,045,803 (+)Ensembl
GRCm38.p6 Ensembl5102,481,391 - 102,897,937 (+)Ensembl
Ensembl Acc Id: ENSMUST00000112852   ⟹   ENSMUSP00000108473
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5102,916,637 - 103,045,803 (+)Ensembl
GRCm38.p6 Ensembl5102,768,771 - 102,897,937 (+)Ensembl
Ensembl Acc Id: ENSMUST00000112853   ⟹   ENSMUSP00000108474
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5102,872,839 - 103,045,803 (+)Ensembl
GRCm38.p6 Ensembl5102,724,973 - 102,897,937 (+)Ensembl
Ensembl Acc Id: ENSMUST00000112854   ⟹   ENSMUSP00000108475
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5102,629,419 - 103,045,803 (+)Ensembl
GRCm38.p6 Ensembl5102,481,553 - 102,897,937 (+)Ensembl
Ensembl Acc Id: ENSMUST00000126125
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5102,629,396 - 102,815,698 (+)Ensembl
GRCm38.p6 Ensembl5102,481,530 - 102,667,832 (+)Ensembl
Ensembl Acc Id: ENSMUST00000130222
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5102,956,915 - 103,023,726 (+)Ensembl
GRCm38.p6 Ensembl5102,809,049 - 102,875,860 (+)Ensembl
RefSeq Acc Id: NM_001286468   ⟹   NP_001273397
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,916,676 - 103,045,803 (+)NCBI
GRCm385102,768,810 - 102,897,937 (+)NCBI
Celera599,802,537 - 100,211,871 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001346585   ⟹   NP_001333514
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,992,873 - 103,045,803 (+)NCBI
GRCm385102,845,007 - 102,897,937 (+)NCBI
Sequence:
RefSeq Acc Id: NM_029270   ⟹   NP_083546
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,629,257 - 103,045,803 (+)NCBI
GRCm385102,481,391 - 102,897,937 (+)NCBI
MGSCv375102,910,410 - 103,326,956 (+)RGD
Celera599,802,537 - 100,211,871 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_146161   ⟹   NP_666273
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,629,257 - 103,045,803 (+)NCBI
GRCm385102,481,391 - 102,897,937 (+)NCBI
MGSCv375102,910,410 - 103,326,956 (+)RGD
Celera599,802,537 - 100,211,871 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006534887   ⟹   XP_006534950
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,629,152 - 103,053,743 (+)NCBI
GRCm385102,481,709 - 102,905,035 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006534888   ⟹   XP_006534951
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,355,043 - 103,053,743 (+)NCBI
GRCm385102,207,198 - 102,905,035 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006534891   ⟹   XP_006534954
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,872,848 - 103,053,743 (+)NCBI
GRCm385102,724,982 - 102,905,035 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006534892   ⟹   XP_006534955
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395103,008,015 - 103,053,743 (+)NCBI
GRCm385102,860,149 - 102,905,035 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011249434   ⟹   XP_011247736
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,989,031 - 103,053,743 (+)NCBI
GRCm385102,841,165 - 102,905,035 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165070   ⟹   XP_036020963
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,629,152 - 103,053,743 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165071   ⟹   XP_036020964
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,629,152 - 103,053,743 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165072   ⟹   XP_036020965
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395102,641,946 - 103,053,743 (+)NCBI
Sequence:
1 to 30 of 33 rows
Protein RefSeqs NP_001273397 (Get FASTA)   NCBI Sequence Viewer  
  NP_001333514 (Get FASTA)   NCBI Sequence Viewer  
  NP_083546 (Get FASTA)   NCBI Sequence Viewer  
  NP_666273 (Get FASTA)   NCBI Sequence Viewer  
  XP_006534950 (Get FASTA)   NCBI Sequence Viewer  
  XP_006534951 (Get FASTA)   NCBI Sequence Viewer  
  XP_006534954 (Get FASTA)   NCBI Sequence Viewer  
  XP_006534955 (Get FASTA)   NCBI Sequence Viewer  
  XP_011247736 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020963 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020964 (Get FASTA)   NCBI Sequence Viewer  
  XP_036020965 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH23344 (Get FASTA)   NCBI Sequence Viewer  
  AAH25502 (Get FASTA)   NCBI Sequence Viewer  
  AAH27070 (Get FASTA)   NCBI Sequence Viewer  
  BAB22267 (Get FASTA)   NCBI Sequence Viewer  
  BAC27590 (Get FASTA)   NCBI Sequence Viewer  
  BAC30402 (Get FASTA)   NCBI Sequence Viewer  
  BAC38105 (Get FASTA)   NCBI Sequence Viewer  
  EDL20253 (Get FASTA)   NCBI Sequence Viewer  
  EDL20254 (Get FASTA)   NCBI Sequence Viewer  
  EDL20255 (Get FASTA)   NCBI Sequence Viewer  
  EDL20256 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000070048
  ENSMUSP00000073028
  ENSMUSP00000073028.6
  ENSMUSP00000092138
  ENSMUSP00000108473
  ENSMUSP00000108473.2
  ENSMUSP00000108474
1 to 30 of 33 rows
1 to 5 of 18 rows
1 to 5 of 18 rows
RefSeq Acc Id: NP_083546   ⟸   NM_029270
- Peptide Label: isoform 1
- UniProtKB: Q8QZZ0 (UniProtKB/Swiss-Prot),   Q8CA50 (UniProtKB/Swiss-Prot),   Q8C4V1 (UniProtKB/Swiss-Prot),   G3X9N1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_666273   ⟸   NM_146161
- Peptide Label: isoform 2
- UniProtKB: Q8QZZ0 (UniProtKB/Swiss-Prot),   Q8CA50 (UniProtKB/Swiss-Prot),   Q8C4V1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001273397   ⟸   NM_001286468
- Peptide Label: isoform 2
- UniProtKB: Q8QZZ0 (UniProtKB/Swiss-Prot),   Q8CA50 (UniProtKB/Swiss-Prot),   Q8C4V1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006534951   ⟸   XM_006534888
- Peptide Label: isoform X2
- UniProtKB: Q8QZZ0 (UniProtKB/Swiss-Prot),   Q8CA50 (UniProtKB/Swiss-Prot),   Q8C4V1 (UniProtKB/Swiss-Prot),   G3X9N1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006534950   ⟸   XM_006534887
- Peptide Label: isoform X2
- UniProtKB: Q8QZZ0 (UniProtKB/Swiss-Prot),   Q8CA50 (UniProtKB/Swiss-Prot),   Q8C4V1 (UniProtKB/Swiss-Prot),   G3X9N1 (UniProtKB/TrEMBL)
- Sequence:
PH   Rho-GAP

Name Modeler Protein Id AA Range Protein Structure
AF-Q8C4V1-F1-model_v2 AlphaFold Q8C4V1 1-747 view protein structure

RGD ID:6887306
Promoter ID:EPDNEW_M7104
Type:multiple initiation site
Name:Arhgap24_4
Description:Mus musculus Rho GTPase activating protein 24 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7105  EPDNEW_M7106  EPDNEW_M7107  EPDNEW_M7108  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385102,207,205 - 102,207,265EPDNEW
RGD ID:6887308
Promoter ID:EPDNEW_M7105
Type:initiation region
Name:Arhgap24_1
Description:Mus musculus Rho GTPase activating protein 24 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7104  EPDNEW_M7106  EPDNEW_M7107  EPDNEW_M7108  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385102,481,487 - 102,481,547EPDNEW
RGD ID:6887310
Promoter ID:EPDNEW_M7106
Type:single initiation site
Name:Arhgap24_2
Description:Mus musculus Rho GTPase activating protein 24 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7104  EPDNEW_M7105  EPDNEW_M7107  EPDNEW_M7108  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385102,585,642 - 102,585,702EPDNEW
RGD ID:6887312
Promoter ID:EPDNEW_M7107
Type:initiation region
Name:Arhgap24_3
Description:Mus musculus Rho GTPase activating protein 24 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7104  EPDNEW_M7105  EPDNEW_M7106  EPDNEW_M7108  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385102,768,877 - 102,768,937EPDNEW
RGD ID:6887314
Promoter ID:EPDNEW_M7108
Type:multiple initiation site
Name:Arhgap24_5
Description:Mus musculus Rho GTPase activating protein 24 , transcript variant4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M7104  EPDNEW_M7105  EPDNEW_M7106  EPDNEW_M7107  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385102,846,041 - 102,846,101EPDNEW
RGD ID:6837104
Promoter ID:MM_KWN:43106
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_4Hour,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000112854,   NM_029270,   NM_146161,   UC008YIV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365102,910,404 - 102,910,904 (+)MPROMDB
RGD ID:6837103
Promoter ID:MM_KWN:43109
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:ENSMUST00000112852
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365103,197,791 - 103,198,291 (+)MPROMDB
RGD ID:6837105
Promoter ID:MM_KWN:43111
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:ENSMUST00000070000,   UC008YIZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365103,273,591 - 103,274,387 (+)MPROMDB


1 to 40 of 41 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000057315 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000070000 ENTREZGENE
  ENSMUST00000073302 ENTREZGENE
  ENSMUST00000073302.12 UniProtKB/Swiss-Prot
  ENSMUST00000094559 ENTREZGENE
  ENSMUST00000112852 ENTREZGENE
  ENSMUST00000112852.8 UniProtKB/Swiss-Prot
  ENSMUST00000112853 ENTREZGENE
  ENSMUST00000112853.8 UniProtKB/Swiss-Prot
  ENSMUST00000112854.8 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.555.10 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot
InterPro PH-like_dom_sf UniProtKB/Swiss-Prot
  PH_domain UniProtKB/Swiss-Prot
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot
  RhoGAP UniProtKB/Swiss-Prot
  RhoGAP_dom UniProtKB/Swiss-Prot
KEGG Report mmu:231532 UniProtKB/Swiss-Prot
MGD MGI:1922647 ENTREZGENE
NCBI Gene Arhgap24 ENTREZGENE
PANTHER RHO GTPASE-ACTIVATING PROTEIN 24 UniProtKB/Swiss-Prot
  SPERMATHECAL PHYSIOLOGY VARIANT UniProtKB/Swiss-Prot
Pfam PF00169 UniProtKB/Swiss-Prot
  RhoGAP UniProtKB/Swiss-Prot
PhenoGen Arhgap24 PhenoGen
PROSITE PH_DOMAIN UniProtKB/Swiss-Prot
  RHOGAP UniProtKB/Swiss-Prot
SMART RhoGAP UniProtKB/Swiss-Prot
  SM00233 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot
  SSF48350 UniProtKB/Swiss-Prot
UniProt D3Z5T4 ENTREZGENE, UniProtKB/TrEMBL
  G3X9N1 ENTREZGENE, UniProtKB/TrEMBL
  Q8BHH3_MOUSE UniProtKB/TrEMBL
  Q8C4V1 ENTREZGENE
  Q8CA50 ENTREZGENE
  Q8QZZ0 ENTREZGENE
  Q9CW98_MOUSE UniProtKB/TrEMBL
  RHG24_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary Q8CA50 UniProtKB/Swiss-Prot
1 to 40 of 41 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Arhgap24  Rho GTPase activating protein 24  0610025G21Rik  RIKEN cDNA 0610025G21 gene  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 0610025G21Rik  RIKEN cDNA 0610025G21 gene  Arhgap24  Rho GTPase activating protein 24  Symbol and/or name change 5135510 APPROVED