Mst1r (macrophage stimulating 1 receptor (c-met-related tyrosine kinase)) - Rat Genome Database

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Gene: Mst1r (macrophage stimulating 1 receptor (c-met-related tyrosine kinase)) Mus musculus
Analyze
Symbol: Mst1r
Name: macrophage stimulating 1 receptor (c-met-related tyrosine kinase)
RGD ID: 1315100
MGI Page MGI
Description: Predicted to enable enzyme binding activity and transmembrane receptor protein tyrosine kinase activity. Acts upstream of or within response to virus. Located in plasma membrane; stress fiber; and vacuole. Is expressed in several structures, including adrenal gland; alimentary system; cranial nerve; extraembryonic component; and musculoskeletal system. Human ortholog(s) of this gene implicated in nasopharynx carcinoma. Orthologous to human MST1R (macrophage stimulating 1 receptor).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: c-met-related tyrosine kinase; CD136; CDw136; friend virus susceptibility 2; Fv; Fv-; Fv-2; Fv2; macrophage-stimulating protein receptor; macrophage-stimulating protein receptor precursor (MSP receptor) (p185-Ron) (Stem cell-derived tyrosine kinase); MSP receptor; p185-Ron; PTK; PTK8; receptor protein tyrosine kinase, c-met-related; Ron; ST; stem cell-derived tyrosine kinase; STK
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,784,057 - 107,797,582 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9107,784,072 - 107,797,582 (+)EnsemblGRCm39 Ensembl
GRCm389107,906,858 - 107,920,383 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,906,873 - 107,920,383 (+)EnsemblGRCm38mm10GRCm38
MGSCv379107,809,220 - 107,822,714 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369107,764,990 - 107,778,484 (+)NCBIMGSCv36mm8
Celera9107,515,111 - 107,528,610 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map959.07NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Fv2 encodes a truncated form of the Stk receptor tyrosine kinase. Persons DA, etal., Nat Genet 1999 Oct;23(2):159-65.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:293685   PMID:300277   PMID:448285   PMID:609115   PMID:1686838   PMID:2175917   PMID:2902634   PMID:2991555   PMID:3855388   PMID:5449211   PMID:5798244   PMID:5937708  
PMID:6283161   PMID:6489477   PMID:6620461   PMID:6803586   PMID:6939921   PMID:7357602   PMID:8034180   PMID:8193352   PMID:8406443   PMID:8545120   PMID:8601032   PMID:9045873  
PMID:9180281   PMID:9467940   PMID:9501086   PMID:9545496   PMID:9680329   PMID:10225971   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11114734   PMID:11217851  
PMID:11483734   PMID:11518730   PMID:11751209   PMID:11777982   PMID:11896610   PMID:12177064   PMID:12214279   PMID:12223493   PMID:12395314   PMID:12411323   PMID:12477932   PMID:12538524  
PMID:12606483   PMID:12773513   PMID:13416470   PMID:13892780   PMID:14499632   PMID:14505749   PMID:14734766   PMID:15078939   PMID:15184888   PMID:15531916   PMID:15735014   PMID:15878878  
PMID:15929040   PMID:16103119   PMID:16141072   PMID:16141073   PMID:16166096   PMID:16166746   PMID:16602821   PMID:16740632   PMID:16789115   PMID:16863504   PMID:17008558   PMID:17178895  
PMID:17304108   PMID:17353274   PMID:17449471   PMID:17488888   PMID:17616662   PMID:17959667   PMID:18684919   PMID:19487969   PMID:19576199   PMID:20016000   PMID:20103639   PMID:20434834  
PMID:20453108   PMID:20504929   PMID:21078906   PMID:21088048   PMID:21267068   PMID:21423209   PMID:21625214   PMID:21677750   PMID:21810604   PMID:21873635   PMID:21967980   PMID:22004727  
PMID:22207901   PMID:22226043   PMID:22287599   PMID:22474186   PMID:22575169   PMID:22893465   PMID:23328584   PMID:23612011   PMID:23945674   PMID:24742989   PMID:24919612   PMID:24952961  
PMID:24954505   PMID:25049204   PMID:25648832   PMID:26008979   PMID:27233965   PMID:28123075   PMID:29616029   PMID:30091925   PMID:30595553   PMID:30967626   PMID:32075650   PMID:32325033  
PMID:32439702   PMID:33508385   PMID:33673346   PMID:34712728   PMID:35626096   PMID:37029299  


Genomics

Comparative Map Data
Mst1r
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399107,784,057 - 107,797,582 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9107,784,072 - 107,797,582 (+)EnsemblGRCm39 Ensembl
GRCm389107,906,858 - 107,920,383 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9107,906,873 - 107,920,383 (+)EnsemblGRCm38mm10GRCm38
MGSCv379107,809,220 - 107,822,714 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369107,764,990 - 107,778,484 (+)NCBIMGSCv36mm8
Celera9107,515,111 - 107,528,610 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map959.07NCBI
MST1R
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38349,887,002 - 49,903,873 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl349,886,902 - 49,903,873 (-)EnsemblGRCh38hg38GRCh38
GRCh37349,924,435 - 49,941,306 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36349,899,439 - 49,916,310 (-)NCBINCBI36Build 36hg18NCBI36
Build 34349,899,441 - 49,916,074NCBI
Celera349,890,532 - 49,907,401 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef349,982,720 - 49,999,587 (-)NCBIHuRef
CHM1_1349,876,510 - 49,893,392 (-)NCBICHM1_1
T2T-CHM13v2.0349,916,899 - 49,933,769 (-)NCBIT2T-CHM13v2.0
Mst1r
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88117,471,928 - 117,491,059 (+)NCBIGRCr8
mRatBN7.28108,596,100 - 108,611,441 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8108,597,299 - 108,612,455 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8114,224,119 - 114,237,556 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08112,423,306 - 112,436,743 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08110,266,082 - 110,279,519 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08116,686,601 - 116,700,132 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8116,686,601 - 116,700,132 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08116,040,918 - 116,054,449 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,175,977 - 113,189,511 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18113,195,431 - 113,208,968 (+)NCBI
Celera8107,901,807 - 107,915,501 (+)NCBICelera
Cytogenetic Map8q32NCBI
Mst1r
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555321,775,033 - 1,787,990 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555321,774,726 - 1,789,662 (-)NCBIChiLan1.0ChiLan1.0
MST1R
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2249,872,957 - 49,892,367 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1349,877,732 - 49,897,142 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0349,818,538 - 49,835,713 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1351,054,795 - 51,072,307 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl351,054,795 - 51,072,401 (-)Ensemblpanpan1.1panPan2
MST1R
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12039,386,970 - 39,400,780 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2039,387,322 - 39,400,588 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2039,308,073 - 39,327,481 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02039,744,306 - 39,763,724 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2039,743,897 - 39,757,861 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12039,111,143 - 39,130,550 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02039,515,612 - 39,535,003 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02039,794,926 - 39,814,335 (+)NCBIUU_Cfam_GSD_1.0
Mst1r
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560264,734,239 - 64,753,244 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365291,495,059 - 1,509,901 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365291,494,748 - 1,509,925 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MST1R
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1332,409,555 - 32,421,920 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11332,401,623 - 32,423,614 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21335,579,209 - 35,603,505 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MST1R
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12211,293,637 - 11,310,239 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2211,293,263 - 11,309,980 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041155,686,841 - 155,703,896 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mst1r
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247303,800,749 - 3,822,389 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247303,802,452 - 3,818,593 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mst1r
429 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:137
Count of miRNA genes:121
Interacting mature miRNAs:131
Transcripts:ENSMUST00000035203
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979279863113279941Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982792386116792481Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986121898120118690Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9101829255124359700Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975682646114303447Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982792386116792481Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985779563108518385Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976417989110418183Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989859058118767089Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974250230108250378Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103118511124359700Mouse
14746992Manh67_mmandible shape 67 (mouse)993865836124359700Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982792386116792481Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986107600120107729Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978522698112522808Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103118511124359700Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103118511124359700Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975682646114303447Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993591658124359700Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9100889929124359700Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996746658124359700Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994863354112701997Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9101829255124359700Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981680321115680445Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984406017118406120Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse
1301484Bwq6_mbody weight (mouse)Not determined993591658124359700Mouse

Markers in Region
BB542156  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,920,159 - 107,920,254UniSTSGRCm38
MGSCv379107,822,490 - 107,822,585UniSTSGRCm37
Celera9107,528,386 - 107,528,481UniSTS
Cytogenetic Map9F1UniSTS
cM Map960.0UniSTS
Whitehead/MRC_RH91109.33UniSTS
X74736  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,920,157 - 107,920,316UniSTSGRCm38
MGSCv379107,822,488 - 107,822,647UniSTSGRCm37
Celera9107,528,384 - 107,528,543UniSTS
Cytogenetic Map9F1UniSTS
cM Map960.0UniSTS
Whitehead_YAC9 UniSTS
PMC115033P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,914,980 - 107,915,817UniSTSGRCm38
MGSCv379107,817,311 - 107,818,148UniSTSGRCm37
Celera9107,523,207 - 107,524,044UniSTS
Cytogenetic Map9F1UniSTS
cM Map960.0UniSTS
PMC34588P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,920,176 - 107,920,350UniSTSGRCm38
MGSCv379107,822,507 - 107,822,681UniSTSGRCm37
Celera9107,528,403 - 107,528,577UniSTS
Cytogenetic Map9F1UniSTS
cM Map960.0UniSTS
Mst1r  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389107,914,927 - 107,914,978UniSTSGRCm38
MGSCv379107,817,258 - 107,817,309UniSTSGRCm37
Celera9107,523,151 - 107,523,205UniSTS
Cytogenetic Map9F1UniSTS
cM Map960.0UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001287261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001413562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_109782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006511658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_379756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_379757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK053655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL731808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC141379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  S80633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U65949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X74736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000035203   ⟹   ENSMUSP00000035203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9107,784,072 - 107,797,582 (+)Ensembl
GRCm38.p6 Ensembl9107,906,873 - 107,920,383 (+)Ensembl
Ensembl Acc Id: ENSMUST00000194527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9107,793,423 - 107,794,103 (+)Ensembl
GRCm38.p6 Ensembl9107,916,224 - 107,916,904 (+)Ensembl
Ensembl Acc Id: ENSMUST00000195113
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9107,792,202 - 107,792,927 (+)Ensembl
GRCm38.p6 Ensembl9107,915,003 - 107,915,728 (+)Ensembl
Ensembl Acc Id: ENSMUST00000195617   ⟹   ENSMUSP00000142201
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9107,784,106 - 107,797,580 (+)Ensembl
GRCm38.p6 Ensembl9107,906,907 - 107,920,381 (+)Ensembl
RefSeq Acc Id: NM_001287261   ⟹   NP_001274190
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,792,186 - 107,797,582 (+)NCBI
GRCm389107,915,003 - 107,920,383 (+)NCBI
Celera9107,515,111 - 107,528,610 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001413562   ⟹   NP_001400491
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,784,106 - 107,797,582 (+)NCBI
RefSeq Acc Id: NM_009074   ⟹   NP_033100
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,784,106 - 107,797,582 (+)NCBI
GRCm389107,906,889 - 107,920,383 (+)NCBI
MGSCv379107,809,220 - 107,822,714 (+)RGD
Celera9107,515,111 - 107,528,610 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_109782
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,784,106 - 107,797,582 (+)NCBI
GRCm389107,906,889 - 107,920,383 (+)NCBI
Celera9107,515,111 - 107,528,610 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006511654   ⟹   XP_006511717
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,784,057 - 107,797,582 (+)NCBI
GRCm389107,906,858 - 107,920,383 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006511655   ⟹   XP_006511718
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,784,057 - 107,797,582 (+)NCBI
GRCm389107,906,858 - 107,920,383 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006511658   ⟹   XP_006511721
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,784,057 - 107,791,505 (+)NCBI
GRCm389107,906,858 - 107,914,306 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017313218   ⟹   XP_017168707
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,785,518 - 107,797,582 (+)NCBI
GRCm389107,908,319 - 107,920,383 (+)NCBI
Sequence:
RefSeq Acc Id: XR_379756
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,784,057 - 107,797,582 (+)NCBI
GRCm389107,906,858 - 107,920,377 (+)NCBI
Sequence:
RefSeq Acc Id: XR_379757
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399107,784,057 - 107,797,582 (+)NCBI
GRCm389107,906,858 - 107,916,570 (+)NCBI
Sequence:
RefSeq Acc Id: NP_033100   ⟸   NM_009074
- Peptide Label: isoform 1 preproprotein
- UniProtKB: E9QMZ4 (UniProtKB/Swiss-Prot),   Q62555 (UniProtKB/Swiss-Prot),   Q62190 (UniProtKB/Swiss-Prot),   B2RUR6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001274190   ⟸   NM_001287261
- Peptide Label: isoform 2
- Sequence:
RefSeq Acc Id: XP_006511721   ⟸   XM_006511658
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006511717   ⟸   XM_006511654
- Peptide Label: isoform X1
- UniProtKB: B2RUR6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006511718   ⟸   XM_006511655
- Peptide Label: isoform X2
- UniProtKB: B2RUR6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017168707   ⟸   XM_017313218
- Peptide Label: isoform X4
- Sequence:
Ensembl Acc Id: ENSMUSP00000035203   ⟸   ENSMUST00000035203
Ensembl Acc Id: ENSMUSP00000142201   ⟸   ENSMUST00000195617
RefSeq Acc Id: NP_001400491   ⟸   NM_001413562
- Peptide Label: isoform 3 precursor
Protein Domains
IPT/TIG   Protein kinase   Sema

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q62190-F1-model_v2 AlphaFold Q62190 1-1378 view protein structure

Promoters
RGD ID:6844826
Promoter ID:MM_KWN:58747
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Lung
Transcripts:UC009RNI.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369107,808,661 - 107,809,962 (+)MPROMDB
RGD ID:8670834
Promoter ID:EPDNEW_M13448
Type:initiation region
Name:Mst1r_1
Description:Mus musculus macrophage stimulating 1 receptor (c-met-relatedtyrosine kinase) , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389107,906,885 - 107,906,945EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:99614 AgrOrtholog
Ensembl Genes ENSMUSG00000032584 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000035203 ENTREZGENE
  ENSMUST00000035203.9 UniProtKB/Swiss-Prot
  ENSMUST00000195617 ENTREZGENE
  ENSMUST00000195617.6 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ligand-binding face of the semaphorins, domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_E-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IPT_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Plexin UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PSI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RON_Sema UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RTK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Semap_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Semap_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_cat_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tyr_kinase_HGF/MSP_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19882 UniProtKB/Swiss-Prot
MGD MGI:99614 ENTREZGENE
NCBI Gene 19882 ENTREZGENE
PANTHER HEPATOCYTE GROWTH FACTOR RECEPTOR UniProtKB/TrEMBL
  MACROPHAGE-STIMULATING PROTEIN RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PLEXIN UniProtKB/TrEMBL
  TYROSINE-PROTEIN KINASE RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pkinase_Tyr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sema UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mst1r PhenoGen
PIRSF TyrPK_HGF-R UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS TYRKINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_TYR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SEMA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IPT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PSI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sema UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TyrKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Plexin repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF101912 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF81296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A6YXY9_MOUSE UniProtKB/TrEMBL
  B2RUR6 ENTREZGENE, UniProtKB/TrEMBL
  E9QMZ4 ENTREZGENE
  Q62190 ENTREZGENE
  Q62555 ENTREZGENE
  RON_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary E9QMZ4 UniProtKB/Swiss-Prot
  Q62555 UniProtKB/Swiss-Prot