Ipp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 116,364,710 - 116,400,607 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 116,364,746 - 116,395,440 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 116,507,512 - 116,543,410 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 116,507,549 - 116,538,243 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 116,180,154 - 116,210,840 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 116,027,313 - 116,036,175 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 115,247,652 - 115,278,446 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | D1 | NCBI | | | | | cM Map | 4 | 53.2 | NCBI | | | | |
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IPP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 45,694,324 - 45,750,653 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 45,694,324 - 45,750,653 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 46,159,996 - 46,216,325 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 45,936,977 - 45,984,720 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 45,894,584 - 45,924,153 | NCBI | | | | | Celera | 1 | 44,443,977 - 44,504,167 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p34.1 | NCBI | | | | | HuRef | 1 | 44,271,018 - 44,331,506 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 46,277,171 - 46,334,044 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 45,566,668 - 45,627,842 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ipp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 135,199,198 - 135,237,912 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 129,962,528 - 130,001,237 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 129,962,643 - 130,001,242 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 132,589,694 - 132,623,162 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 134,344,291 - 134,377,759 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 134,366,716 - 134,400,185 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 135,351,767 - 135,390,363 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 135,351,816 - 135,388,083 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 139,148,032 - 139,186,535 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 136,794,175 - 136,825,352 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 136,796,547 - 136,830,178 (+) | NCBI | | | | | Celera | 5 | 128,494,428 - 128,527,069 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q35 | NCBI | | | | |
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Ipp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955464 | 12,562,756 - 12,589,939 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955464 | 12,562,824 - 12,589,976 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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IPP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 1 | 181,056,615 - 181,117,886 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 180,200,865 - 180,259,198 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 44,993,669 - 45,052,411 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 46,351,490 - 46,408,224 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 46,351,496 - 46,408,224 (-) | Ensembl | panpan1.1 | | panPan2 | |
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IPP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 15 | 14,621,969 - 14,669,728 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 15 | 14,621,600 - 14,669,561 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 15 | 14,743,360 - 14,790,739 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 14,776,148 - 14,824,008 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 14,776,242 - 14,823,893 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 15 | 14,573,867 - 14,621,282 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 14,643,401 - 14,691,167 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 14,713,121 - 14,761,048 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ipp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405058 | 60,977,685 - 61,009,696 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936474 | 26,801,546 - 26,835,116 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936474 | 26,802,467 - 26,834,449 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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IPP (Sus scrofa - pig) |
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IPP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 87,060,486 - 87,100,653 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 87,061,075 - 87,099,415 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 29,869,144 - 29,909,944 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ipp (Heterocephalus glaber - naked mole-rat) |
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