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Gene: Ttc5 (tetratricopeptide repeat domain 5) Rattus norvegicus
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Symbol: Ttc5
Name: tetratricopeptide repeat domain 5
Description: Predicted to have DNA binding activity and chromatin binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to the cytoplasm and nucleoplasm. Orthologous to human TTC5 (tetratricopeptide repeat domain 5); PARTICIPATES IN p53 signaling pathway; INTERACTS WITH bisphenol A; Soman; 4,4'-diaminodiphenylmethane (ortholog).
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC305837; MGC108914; strap; stress-responsive activator of p300; tetratricopeptide repeat protein 5; TPR repeat protein 5
Orthologs:
Homo sapiens (human) : TTC5 (tetratricopeptide repeat domain 5)  HGNC  Alliance
Mus musculus (house mouse) : Ttc5 (tetratricopeptide repeat domain 5)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ttc5 (tetratricopeptide repeat domain 5)
Pan paniscus (bonobo/pygmy chimpanzee) : TTC5 (tetratricopeptide repeat domain 5)
Canis lupus familiaris (dog) : TTC5 (tetratricopeptide repeat domain 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ttc5 (tetratricopeptide repeat domain 5)
Sus scrofa (pig) : TTC5 (tetratricopeptide repeat domain 5)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01527,698,375 - 27,715,970 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01531,530,800 - 31,548,395 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41526,749,259 - 26,766,848 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11526,764,960 - 26,782,548 (-)NCBI
Celera1524,312,000 - 24,330,147 (-)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Ttc5
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311284
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.