Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Naa60 | Rat | Idiopathic Basal Ganglia Calcification 9 | | ISO | NAA60 (Homo sapiens) | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMObject Symbol | Species | Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Naa60 | Rat | Idiopathic Basal Ganglia Calcification 9 | | ISO | NAA60 (Homo sapiens) | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
3. | GOA pipeline | RGD automated data pipeline |
4. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:12477932 | PMID:21750686 | PMID:21981917 | PMID:25732826 | PMID:27320834 | PMID:27550639 |
Naa60 (Rattus norvegicus - Norway rat) |
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NAA60 (Homo sapiens - human) |
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Naa60 (Mus musculus - house mouse) |
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Naa60 (Chinchilla lanigera - long-tailed chinchilla) |
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NAA60 (Pan paniscus - bonobo/pygmy chimpanzee) |
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NAA60 (Canis lupus familiaris - dog) |
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Naa60 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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NAA60 (Sus scrofa - pig) |
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NAA60 (Chlorocebus sabaeus - green monkey) |
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Naa60 (Heterocephalus glaber - naked mole-rat) |
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Variants in Naa60
83 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH133439 |
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BF405602 |
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RH139149 |
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alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 49 | 113 | 91 | 90 | 59 | 25 | 59 | 6 | 218 | 97 | 93 | 45 | 60 | 31 |
RefSeq Transcripts | NM_001014226 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_017597418 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC129669 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AY316589 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC105304 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ212054 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000010 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
Ensembl Acc Id: | ENSRNOT00000009936 ⟹ ENSRNOP00000009936 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000075238 ⟹ ENSRNOP00000064770 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000102976 ⟹ ENSRNOP00000089284 | ||||||||
Type: | CODING | ||||||||
Position: |
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Ensembl Acc Id: | ENSRNOT00000106221 ⟹ ENSRNOP00000088883 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001014226 ⟹ NP_001014248 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
Protein RefSeqs | NP_001014248 | (Get FASTA) | NCBI Sequence Viewer |
GenBank Protein | AAI05305 | (Get FASTA) | NCBI Sequence Viewer |
AAP83441 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000009936.3 | ||
ENSRNOP00000064770.2 | |||
ENSRNOP00000088883.1 | |||
ENSRNOP00000089284.1 | |||
ENSRNOP00055034654 | |||
ENSRNOP00060012579 | |||
ENSRNOP00065011727 | |||
GenBank Protein | Q3MHC1 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001014248 ⟸ NM_001014226 |
- UniProtKB: | Q7TMZ6 (UniProtKB/Swiss-Prot), Q3MHC1 (UniProtKB/Swiss-Prot) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000064770 ⟸ ENSRNOT00000075238 |
Ensembl Acc Id: | ENSRNOP00000009936 ⟸ ENSRNOT00000009936 |
Ensembl Acc Id: | ENSRNOP00000089284 ⟸ ENSRNOT00000102976 |
Ensembl Acc Id: | ENSRNOP00000088883 ⟸ ENSRNOT00000106221 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q3MHC1-F1-model_v2 | AlphaFold | Q3MHC1 | 1-242 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13696988 | ||||||||
Promoter ID: | EPDNEW_R7510 | ||||||||
Type: | initiation region | ||||||||
Name: | Naa60_1 | ||||||||
Description: | N-acetyltransferase 60, NatF catalytic subunit | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1308915 | AgrOrtholog |
BioCyc Gene | G2FUF-25993 | BioCyc |
Ensembl Genes | ENSRNOG00000007280 | Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ENSRNOG00055024638 | UniProtKB/Swiss-Prot | |
ENSRNOG00060009489 | UniProtKB/Swiss-Prot | |
ENSRNOG00065009682 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000009936.7 | UniProtKB/Swiss-Prot |
ENSRNOT00000075238.2 | UniProtKB/TrEMBL | |
ENSRNOT00000102976.1 | UniProtKB/TrEMBL | |
ENSRNOT00000106221.1 | UniProtKB/TrEMBL | |
ENSRNOT00055042435 | UniProtKB/Swiss-Prot | |
ENSRNOT00060016073 | UniProtKB/Swiss-Prot | |
ENSRNOT00065015554 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 3.40.630.30 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
IMAGE_CLONE | IMAGE:7191187 | IMAGE-MGC_LOAD |
InterPro | Acyl_CoA_acyltransferase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
GNAT_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
NAA60-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:363545 | UniProtKB/Swiss-Prot |
MGC_CLONE | MGC:124897 | IMAGE-MGC_LOAD |
NCBI Gene | 363545 | ENTREZGENE |
PANTHER | N-ALPHA-ACETYLTRANSFERASE 60 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR14744 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Acetyltransf_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PhenoGen | Naa60 | PhenoGen |
PROSITE | GNAT | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
RatGTEx | ENSRNOG00000007280 | RatGTEx |
ENSRNOG00055024638 | RatGTEx | |
ENSRNOG00060009489 | RatGTEx | |
ENSRNOG00065009682 | RatGTEx | |
Superfamily-SCOP | SSF55729 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A8I6A718_RAT | UniProtKB/TrEMBL |
A0A8I6A7V0_RAT | UniProtKB/TrEMBL | |
A0A8L2UNM0_RAT | UniProtKB/TrEMBL | |
NAA60_RAT | UniProtKB/Swiss-Prot, ENTREZGENE | |
Q7TMZ6 | ENTREZGENE | |
UniProt Secondary | Q7TMZ6 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2011-09-02 | Naa60 | N(alpha)-acetyltransferase 60, NatF catalytic subunit | Nat15 | N-acetyltransferase 15 (GCN5-related, putative) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-10-16 | Nat15 | N-acetyltransferase 15 (GCN5-related, putative) | RGD1308915 | similar to RIKEN cDNA 1200013P24 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-12-06 | RGD1308915 | similar to RIKEN cDNA 1200013P24 | RGD1308915_predicted | similar to RIKEN cDNA 1200013P24 (predicted) | Symbol and Name updated | 1559027 | APPROVED |
2005-01-20 | RGD1308915_predicted | similar to RIKEN cDNA 1200013P24 (predicted) | LOC363545_predicted | Symbol and Name status set to approved | 1331353 | APPROVED | |
2005-01-12 | LOC363545_predicted | similar to RIKEN cDNA 1200013P24 (predicted) | Symbol and Name status set to provisional | 70820 | PROVISIONAL |