Tbck (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 2 | 223,849,758 - 224,022,097 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 221,175,749 - 221,348,058 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 221,175,785 - 221,348,126 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 228,834,818 - 229,006,434 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 226,734,492 - 226,906,117 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 221,592,148 - 221,763,773 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 237,751,646 - 237,958,497 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 237,751,654 - 237,958,497 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 256,292,173 - 256,392,202 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Rnor_5.0 | 2 | 256,478,885 - 256,497,625 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 230,166,553 - 230,336,937 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 230,157,310 - 230,320,449 (+) | NCBI | | | | | Celera | 2 | 213,411,825 - 213,582,768 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q43 | NCBI | | | | |
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TBCK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 106,041,599 - 106,316,683 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 106,041,599 - 106,316,683 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 106,962,756 - 107,237,840 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 107,186,686 - 107,456,834 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 4 | 104,266,483 - 104,537,097 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q24 | NCBI | | | | | HuRef | 4 | 102,701,932 - 102,972,542 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 106,944,195 - 107,214,812 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 109,352,697 - 109,627,755 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tbck (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 132,389,874 - 132,547,451 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 132,389,905 - 132,547,449 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 132,684,113 - 132,841,688 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 132,684,144 - 132,841,688 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 132,347,108 - 132,501,470 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 132,621,494 - 132,734,140 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 139,112,793 - 139,262,347 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | G3 | NCBI | | | | | cM Map | 3 | 61.49 | NCBI | | | | |
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Tbck (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955496 | 3,114,360 - 3,290,909 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955496 | 3,108,113 - 3,288,141 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TBCK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 104,133,114 - 104,415,098 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 104,428,306 - 104,710,319 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 98,515,422 - 98,797,701 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 109,126,992 - 109,404,266 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 109,126,999 - 109,403,946 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TBCK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 32 | 26,839,133 - 27,062,629 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 26,793,215 - 27,055,609 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 14,964,207 - 15,187,280 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 27,071,205 - 27,294,356 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 27,070,192 - 27,294,366 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 32 | 27,067,283 - 27,288,311 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 26,812,805 - 27,033,954 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 12,826,622 - 13,049,605 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Tbck (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405301 | 14,120,115 - 14,334,943 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936814 | 837,345 - 1,052,572 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936814 | 837,394 - 1,052,220 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TBCK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 115,476,956 - 115,699,941 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 115,476,776 - 115,703,011 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 123,951,855 - 124,059,910 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TBCK (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 7 | 54,077,748 - 54,309,589 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 54,075,641 - 54,309,518 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 32,699,739 - 32,943,110 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tbck (Heterocephalus glaber - naked mole-rat) |
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