Comtd1 (catechol-O-methyltransferase domain containing 1) - Rat Genome Database

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Gene: Comtd1 (catechol-O-methyltransferase domain containing 1) Rattus norvegicus
Analyze
Symbol: Comtd1
Name: catechol-O-methyltransferase domain containing 1
RGD ID: 1306581
Description: Predicted to enable S-adenosylmethionine-dependent methyltransferase activity. Predicted to be involved in methylation. Predicted to be located in mitochondrion. Orthologous to human COMTD1 (catechol-O-methyltransferase domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: catechol O-methyltransferase domain-containing protein 1; LOC305685
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8152,509,121 - 2,512,232 (+)NCBIGRCr8
mRatBN7.2152,459,783 - 2,462,895 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl152,459,783 - 2,462,895 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx152,467,227 - 2,470,346 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0153,853,673 - 3,856,792 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0152,466,022 - 2,469,141 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0152,631,529 - 2,634,640 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl152,631,529 - 2,634,640 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0152,612,542 - 2,615,653 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4152,512,204 - 2,515,315 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1152,512,247 - 2,514,099 (+)NCBI
Celera152,119,181 - 2,122,292 (-)NCBICelera
Cytogenetic Map15p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Comtd1RatGenitopatellar Syndrome  ISOCOMTD1 (Homo sapiens)8554872ClinVar Annotator: match by term: Genitopatellar syndromeClinVarPMID:22077973 more ...

1 to 20 of 82 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Comtd1Rat(+)-catechin multiple interactionsISOCOMTD1 (Homo sapiens)6480464[Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of COMTD1 mRNACTDPMID:24763279
Comtd1Rat(-)-demecolcine decreases expressionISOCOMTD1 (Homo sapiens)6480464Demecolcine results in decreased expression of COMTD1 mRNACTDPMID:23649840
Comtd1Rat(1->4)-beta-D-glucan multiple interactionsISOComtd1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of COMTD1 mRNACTDPMID:36331819
Comtd1Rat1,2-dimethylhydrazine multiple interactionsISOComtd1 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of COMTD1 mRNACTDPMID:22206623
Comtd1Rat2,2',5,5'-tetrachlorobiphenyl decreases expressionISOCOMTD1 (Homo sapiens)64804642 more ...CTDPMID:36804509
Comtd1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOComtd1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of COMTD1 mRNACTDPMID:21570461
Comtd1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of COMTD1 mRNACTDPMID:33387578
Comtd1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of COMTD1 mRNACTDPMID:34747641
Comtd1Rat2,4,6-trinitrotoluene affects expressionEXP 6480464Trinitrotoluene affects the expression of COMTD1 mRNACTDPMID:21346803
Comtd1Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of COMTD1 mRNACTDPMID:21346803
Comtd1Rat3-chloropropane-1,2-diol increases expressionEXP 6480464alpha-Chlorohydrin results in increased expression of COMTD1 proteinCTDPMID:34915118
Comtd1Rat4,4'-sulfonyldiphenol affects expressionISOComtd1 (Mus musculus)6480464bisphenol S affects the expression of COMTD1 mRNACTDPMID:39298647
Comtd1Rat4-amino-2,6-dinitrotoluene affects expressionEXP 64804644-amino-2 and 6-dinitrotoluene affects the expression of COMTD1 mRNACTDPMID:21346803
Comtd1Rat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of COMTD1 mRNACTDPMID:30047161
Comtd1Ratacetamide increases expressionEXP 6480464acetamide results in increased expression of COMTD1 mRNACTDPMID:31881176
Comtd1Ratacrylamide decreases expressionISOCOMTD1 (Homo sapiens)6480464Acrylamide results in decreased expression of COMTD1 mRNACTDPMID:32763439
Comtd1Ratall-trans-retinoic acid decreases expressionISOCOMTD1 (Homo sapiens)6480464Tretinoin results in decreased expression of COMTD1 mRNACTDPMID:23724009
Comtd1Rataristolochic acid A decreases expressionISOCOMTD1 (Homo sapiens)6480464aristolochic acid I results in decreased expression of COMTD1 mRNACTDPMID:33212167
Comtd1Ratarsane multiple interactionsISOCOMTD1 (Homo sapiens)6480464[sodium arsenate results in increased abundance of Arsenic] which results in decreased expression of COMTD1 mRNACTDPMID:32525701
Comtd1Ratarsenic atom multiple interactionsISOCOMTD1 (Homo sapiens)6480464[sodium arsenate results in increased abundance of Arsenic] which results in decreased expression of COMTD1 mRNACTDPMID:32525701

1 to 20 of 82 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Comtd1Ratmethylation involved_inIEAUniProtKB-KW:KW-04891600115GO_REF:0000043UniProtGO_REF:0000043

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Comtd1Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Comtd1Ratmitochondrion located_inISOCOMTD1 (Homo sapiens)9068941 PMID:34800366FlyBasePMID:34800366

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Comtd1Ratmethyltransferase activity enablesIEAUniProtKB-KW:KW-04891600115GO_REF:0000043UniProtGO_REF:0000043
Comtd1RatO-methyltransferase activity enablesIEAInterPro:IPR0029351600115GO_REF:0000002InterProGO_REF:0000002
Comtd1Ratprotein binding enablesISOCOMTD1 (Homo sapiens)1624291UniProtKB:Q9UMX0-2 and PMID:25416956RGDPMID:25416956
Comtd1RatS-adenosylmethionine-dependent methyltransferase activity enablesIBAPANTHER:PTN000053484 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Comtd1Rattransferase activity enablesIEAUniProtKB-KW:KW-08081600115GO_REF:0000043UniProtGO_REF:0000043


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:18614015   PMID:34800366  



Comtd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8152,509,121 - 2,512,232 (+)NCBIGRCr8
mRatBN7.2152,459,783 - 2,462,895 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl152,459,783 - 2,462,895 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx152,467,227 - 2,470,346 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0153,853,673 - 3,856,792 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0152,466,022 - 2,469,141 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0152,631,529 - 2,634,640 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl152,631,529 - 2,634,640 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0152,612,542 - 2,615,653 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4152,512,204 - 2,515,315 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1152,512,247 - 2,514,099 (+)NCBI
Celera152,119,181 - 2,122,292 (-)NCBICelera
Cytogenetic Map15p16NCBI
COMTD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381075,233,641 - 75,235,957 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1075,233,641 - 75,236,030 (-)EnsemblGRCh38hg38GRCh38
GRCh371076,993,399 - 76,995,715 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361076,663,735 - 76,665,776 (-)NCBINCBI36Build 36hg18NCBI36
Build 341076,663,735 - 76,665,776NCBI
Celera1070,281,988 - 70,284,029 (-)NCBICelera
Cytogenetic Map10q22.2NCBI
HuRef1070,992,121 - 70,994,162 (-)NCBIHuRef
CHM1_11077,275,551 - 77,277,592 (-)NCBICHM1_1
T2T-CHM13v2.01076,107,149 - 76,109,465 (-)NCBIT2T-CHM13v2.0
Comtd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391421,895,929 - 21,898,978 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1421,895,923 - 21,899,045 (-)EnsemblGRCm39 Ensembl
GRCm381421,845,861 - 21,848,910 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1421,845,855 - 21,848,977 (-)EnsemblGRCm38mm10GRCm38
MGSCv371422,665,083 - 22,668,132 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361420,634,413 - 20,637,462 (-)NCBIMGSCv36mm8
Celera1418,228,558 - 18,231,648 (-)NCBICelera
Cytogenetic Map14A3NCBI
cM Map1411.92NCBI
Comtd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543716,853,518 - 16,854,867 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543716,853,516 - 16,854,867 (+)NCBIChiLan1.0ChiLan1.0
COMTD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2887,394,214 - 87,396,365 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11087,399,539 - 87,401,670 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01071,766,326 - 71,768,451 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11074,429,376 - 74,431,497 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1074,429,376 - 74,431,497 (-)Ensemblpanpan1.1panPan2
COMTD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1425,464,448 - 25,466,218 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl425,464,454 - 25,466,323 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha425,597,675 - 25,601,325 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0425,745,174 - 25,748,819 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl425,747,121 - 25,748,809 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1425,640,221 - 25,643,858 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0425,840,812 - 25,844,442 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0426,199,026 - 26,200,730 (-)NCBIUU_Cfam_GSD_1.0
Comtd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721355,624,859 - 55,629,829 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365214,116,995 - 4,120,184 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365214,116,893 - 4,121,782 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COMTD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1477,782,672 - 77,786,837 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11477,783,064 - 77,786,871 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
COMTD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1956,135,882 - 56,142,754 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl956,136,659 - 56,138,553 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604816,623,941 - 16,628,822 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Comtd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247548,603,257 - 8,610,243 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247548,604,935 - 8,606,633 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Comtd1
12 total Variants

Predicted Target Of
Summary Value
Count of predictions:306
Count of miRNA genes:191
Interacting mature miRNAs:227
Transcripts:ENSRNOT00000018897
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 11 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15105825014481294Rat
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat

1 to 10 of 11 rows
RH142258  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2152,461,323 - 2,461,493 (+)MAPPERmRatBN7.2
Rnor_6.0152,633,070 - 2,633,239NCBIRnor6.0
Rnor_5.0152,614,083 - 2,614,252UniSTSRnor5.0
RGSC_v3.4152,513,745 - 2,513,914UniSTSRGSC3.4
Celera152,120,582 - 2,120,751UniSTS
RH 3.4 Map1545.3UniSTS
Cytogenetic Map15p16UniSTS
RH135028  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2152,462,675 - 2,462,856 (+)MAPPERmRatBN7.2
Rnor_6.0152,634,421 - 2,634,601NCBIRnor6.0
Rnor_5.0152,615,434 - 2,615,614UniSTSRnor5.0
RGSC_v3.4152,515,096 - 2,515,276UniSTSRGSC3.4
Celera152,119,220 - 2,119,400UniSTS
RH 3.4 Map1544.6UniSTS
Cytogenetic Map15p16UniSTS
RH141113  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2152,461,338 - 2,461,538 (+)MAPPERmRatBN7.2
Rnor_6.0152,633,085 - 2,633,284NCBIRnor6.0
Rnor_5.0152,614,098 - 2,614,297UniSTSRnor5.0
RGSC_v3.4152,513,760 - 2,513,959UniSTSRGSC3.4
Celera152,120,537 - 2,120,736UniSTS
RH 3.4 Map4632.72UniSTS
Cytogenetic Map15p16UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


RefSeq Transcripts NM_001107249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000018897   ⟹   ENSRNOP00000018897
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl152,459,783 - 2,462,895 (+)Ensembl
Rnor_6.0 Ensembl152,631,529 - 2,634,640 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000098144   ⟹   ENSRNOP00000079281
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl152,459,805 - 2,462,895 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000111951   ⟹   ENSRNOP00000090138
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl152,459,783 - 2,462,895 (+)Ensembl
RefSeq Acc Id: NM_001107249   ⟹   NP_001100719
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8152,509,121 - 2,512,232 (+)NCBI
mRatBN7.2152,459,783 - 2,462,895 (+)NCBI
Rnor_6.0152,631,529 - 2,634,640 (+)NCBI
Rnor_5.0152,612,542 - 2,615,653 (+)NCBI
RGSC_v3.4152,512,204 - 2,515,315 (+)RGD
Celera152,119,181 - 2,122,292 (-)RGD
Sequence:
Protein RefSeqs NP_001100719 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL86279 (Get FASTA)   NCBI Sequence Viewer  
  EDL86280 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000018897
  ENSRNOP00000018897.4
  ENSRNOP00000079281.1
  ENSRNOP00000090138.1
RefSeq Acc Id: NP_001100719   ⟸   NM_001107249
- UniProtKB: D3ZM21 (UniProtKB/TrEMBL),   A6KKT5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000018897   ⟸   ENSRNOT00000018897
Ensembl Acc Id: ENSRNOP00000079281   ⟸   ENSRNOT00000098144
Ensembl Acc Id: ENSRNOP00000090138   ⟸   ENSRNOT00000111951

Name Modeler Protein Id AA Range Protein Structure
AF-D3ZM21-F1-model_v2 AlphaFold D3ZM21 1-262 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13699545
Promoter ID:EPDNEW_R10069
Type:initiation region
Name:Comtd1_1
Description:catechol-O-methyltransferase domain containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0152,631,560 - 2,631,620EPDNEW


1 to 31 of 31 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-14602 BioCyc
BioCyc Pathway PWY-6334 [L-dopa degradation I (mammalian)] BioCyc
  PWY-6342 [noradrenaline and adrenaline degradation] BioCyc
  PWY18C3-23 [guaiacol biosynthesis] BioCyc
  PWY6666-2 [dopamine degradation] BioCyc
BioCyc Pathway Image PWY-6334 BioCyc
  PWY-6342 BioCyc
  PWY18C3-23 BioCyc
  PWY6666-2 BioCyc
Ensembl Genes ENSRNOG00000013968 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000018897 ENTREZGENE
  ENSRNOT00000018897.6 UniProtKB/TrEMBL
  ENSRNOT00000098144.1 UniProtKB/TrEMBL
  ENSRNOT00000111951.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.150 UniProtKB/TrEMBL
InterPro Cation-dep_OMT UniProtKB/TrEMBL
  O-MeTrfase_3 UniProtKB/TrEMBL
  SAM-dependent_MTases-like UniProtKB/TrEMBL
KEGG Report rno:305685 UniProtKB/TrEMBL
NCBI Gene 305685 ENTREZGENE
PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  O-METHYLTRANSFERASE-RELATED UniProtKB/TrEMBL
Pfam Methyltransf_3 UniProtKB/TrEMBL
PhenoGen Comtd1 PhenoGen
PROSITE SAM_OMT_I UniProtKB/TrEMBL
RatGTEx ENSRNOG00000013968 RatGTEx
Superfamily-SCOP SSF53335 UniProtKB/TrEMBL
UniProt A0A8I5ZME1_RAT UniProtKB/TrEMBL
  A0A8I6A9G9_RAT UniProtKB/TrEMBL
  A6KKT5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZM21 ENTREZGENE, UniProtKB/TrEMBL
1 to 31 of 31 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Comtd1  catechol-O-methyltransferase domain containing 1   Comtd1_predicted  catechol-O-methyltransferase domain containing 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Comtd1_predicted  catechol-O-methyltransferase domain containing 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED