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Gene: Anks1a (ankyrin repeat and sterile alpha motif domain containing 1A) Ictidomys tridecemlineatus

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Symbol:

Anks1a

Name:

ankyrin repeat and sterile alpha motif domain containing 1A

RGD ID:

12736369

Description:

ENCODES a protein that exhibits ephrin receptor binding (inferred); INVOLVED IN negative regulation of ubiquitin-dependent protein catabolic process (ortholog); neuron remodeling (ortholog); regulation of ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); proteasome-associated autoinflammatory syndrome 1 (ortholog); FOUND IN neuron projection (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ankyrin repeat and SAM domain-containing protein 1A

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	39,759,615 - 39,865,169 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	24,092,759 - 24,200,612 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	24,093,838 - 24,200,611 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

coronary artery disease (ISO)

proteasome-associated autoinflammatory syndrome 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ephrin receptor signaling pathway (IEA)

negative regulation of ubiquitin-dependent protein catabolic process (ISO)

neuron remodeling (ISO)

regulation of ephrin receptor signaling pathway (ISO)

substrate-dependent cell migration (ISO)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

neuron projection (ISO)

nucleoplasm (IEA)

Molecular Function

ephrin receptor binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Anks1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	39,759,615 - 39,865,169 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	24,092,759 - 24,200,612 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	24,093,838 - 24,200,611 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ANKS1A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	34,889,255 - 35,097,990 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	34,889,255 - 35,091,406 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	34,857,032 - 35,059,183 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	34,965,016 - 35,167,168 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	6	36,411,475 - 36,613,603 (+)	NCBI		Celera
Cytogenetic Map	6	p21.31	NCBI
HuRef	6	34,579,837 - 34,781,340 (+)	NCBI		HuRef
CHM1_1	6	34,859,101 - 35,061,139 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	34,712,070 - 34,920,800 (+)	NCBI		T2T-CHM13v2.0

Anks1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	28,128,273 - 28,281,753 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	28,128,280 - 28,281,749 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	27,909,304 - 28,062,779 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	27,909,306 - 28,062,775 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	28,046,285 - 28,199,582 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	27,636,929 - 27,790,226 (+)	NCBI		MGSCv36	mm8
Celera	17	28,462,415 - 28,615,993 (+)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	14.6	NCBI

Anks1a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	5,965,421 - 6,118,875 (+)	NCBI		GRCr8
mRatBN7.2	20	5,963,658 - 6,117,139 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	5,963,678 - 6,117,148 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	6,676,254 - 6,829,740 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	6,038,050 - 6,191,557 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	6,517,744 - 6,671,160 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	7,484,550 - 7,636,498 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	7,484,550 - 7,636,497 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	9,686,580 - 9,840,939 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	6,121,316 - 6,274,822 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	6,121,537 - 6,273,689 (+)	NCBI
Celera	20	7,524,771 - 7,677,018 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

Anks1a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	2,916,598 - 3,070,771 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	2,916,598 - 3,070,771 (+)	NCBI	ChiLan1.0	ChiLan1.0

ANKS1A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	49,356,394 - 49,559,747 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	45,223,781 - 45,427,235 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	34,450,695 - 34,653,881 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	35,613,582 - 35,750,581 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	35,548,124 - 35,776,185 (+)	Ensembl	panpan1.1		panPan2

ANKS1A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	4,095,394 - 4,274,428 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	4,095,490 - 4,272,654 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	4,110,661 - 4,289,686 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	4,431,356 - 4,611,477 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	4,431,333 - 4,611,277 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	4,091,532 - 4,270,545 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	4,172,585 - 4,351,607 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	4,272,622 - 4,451,697 (+)	NCBI		UU_Cfam_GSD_1.0

ANKS1A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	30,812,920 - 30,995,360 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	30,812,925 - 30,995,369 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	35,661,335 - 35,766,115 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ANKS1A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	37,036,665 - 37,229,906 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	37,036,066 - 37,155,596 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	34,804,936 - 34,999,631 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Anks1a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	22,309,812 - 22,463,170 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	22,306,363 - 22,463,273 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013355767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013355769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013355770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013355772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021721998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021721999	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021722000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021722001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021722002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021722003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040282517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005732736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000000243 ⟹ ENSSTOP00000000215

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936476	24,095,375 - 24,200,611 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000025839 ⟹ ENSSTOP00000015211

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936476	24,092,759 - 24,200,612 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000039197 ⟹ ENSSTOP00000031957

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936476	24,095,375 - 24,200,611 (-)	Ensembl

RefSeq Acc Id:

XM_013355767 ⟹ XP_013211221

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,004 (+)	NCBI
SpeTri2.0	NW_004936476	24,093,838 - 24,200,611 (-)	NCBI

Sequence:

show sequence

ATGTGGAGAGGCCCAAATGTGAACTGTGTTGACAGCACTGGCTACACACCGCTGCACCACGCTG
CTCTGAACGGCCATAAGGATGTGGTGGAAGTTCTTCTGAGGAACGATGCACTGACCAATGTGGC
TGACTCTAAAGGCTGTTACCCTCTGCACTTGGCAGCCTGGAAAGGAGATGCCCAGATAGTGCGG
TTGCTCATCCATCAAGGGCCTTCACACACCAGAGTCAATGAACAGAATGCTCTTGAGATCAAAG
AACTCAAAAAGTACGGCCCCTTTGACCCTTATATCAATGCCAAGAACAATGACAACGAGACGGC
CCTGCACTGTGCAGCACAGTATGGCCACACGGAGGTGGTGAAGGTGCTCTTGGAGGAGCTCACA
GACCCCACCATGCGAAACAACAAATTCGAGACCCCCCTGGACCTGGCAGCGCTCTACGGGCGGC
TGGAGGTGGTGAAGATGCTCCTCAATGCGCACCCCAACCTCTTGAGTTGCAACACTAAGAAGCA
CACCCCGCTGCACCTTGCAGCAAGGAATGGCCACAGGGCTGTGGTCCAGGTCCTCCTGGATGCT
GGCATGGACAGCAACTACCAGACGGAGATGGGCAGTGCTTTGCATGAGGCTGCTTTGTTTGGCA
AGACCGATGTGGTACAAATCCTGCTGGCTGCAGGAATTGATGTCAACATAAAAGATAACCATGG
ACTGACTGCCCTAGACACTGTGCGGGAACTGCCTTCTCAGAAGAGCCAGCAGATAGCAGCACTT
ATTGAAGATCACATGACTGGAAAGAGAAGTACAAAAGACATAGAGAAAATCTCCACGCCCCAGC
CAGCTCTCCTCTCCATCGCGGACTCCGTAGCACCAAAGTCTCAGGGTGATGTGGAAAAAGCAGT
AACTGAACTGATCATCGATTTTGACCCAAATACTGAAGAGGAGGGTCCCTACGAGGCGCTGTAC
AACGCTGTTTCCTGCCATTCACTAGACAGCATGGCCAGCGGGCGGTCATCTGACCGGGACTCTG
TGAACAAGGAGACCGAGGCAGGGGGAGCAAGAACCGCTGGAGTGAGGCCTAGAGAACGTCCACC
GCCTCCAGCAAAGCCACCACCAGATGAAGAGGAGGAAGACCGCATAGATAAGAAGTATTTTCCC
TTGACAGCTTCTGAGGTCCTGGCCACGAGACCCAGGATTCAGGGGAGTGCAGCCCAGGAAGAGG
ACGAGCACCCTTACGAGCTGCTGTTAACAGCAGAGACAAAGAAGCTGGTGTCAGTGGACGGAAA
AGCAAAAGACCACAGGCGGAGCAGCAGCAGTCGGAGCCAGGACTCTGCAGAGGGGCAGGACGGG
CAGGTCCCCGAGCAGTTCTCCGGTCTCCTCCACGGCTCCTCCCCGGTGTGTGAGGTGGGGCAGG
ACCCTTTCCAGCTGCTCTCCACCACAGGCCAGAGCCATCCAGACGGGTCCCCCCAGCAGGGCGC
CTGCCACGAGGCCAGCATGCAGCTGGAGGAGTCGGGTGTGCACACTCCAGAAGCCTCCCAGCCC
TGTGGTCTGGACCAGAGCAAGAGAACAGGCTACCCAGCGGGCCTGCCCCCCACCAGCAGCCTGT
CGCACCCCGAAACTTGGACTCGCACGGCATCCCCGCACCCTGGTGGTGCTGAGGAAGAAGGAGA
CCGGAGTGGGGCCAGAAGCCGAGCCCCTCCCACCAGCAAACCCAAAGCCGAGCTCAAACTCAGC
CGCAGCTTGTCCAAGTCTGACTCTGATCTCCTGACCTGCTCACCCACCGAGGACGCGACGATGG
GGAGCCGGAGTGAGTCTCTGTCCAACTGTAGCATTGGGAAGAAGAGGCTGGAGAAGTCGCCTTC
CTTCGCCTCTGAGTGGGATGAGATTGAGAAAATCATGAGCTCTATTGGAGAAGGGATCGACTTT
TCTCAGGAACAGCAGAAGATCTCAGGTTCACGGACGCTGGAGCAGAGCGTCGGGGAGTGGCTGG
AGTCGGTTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACGATGTCCGCTT
CCTGGGATCTAACGTGATGGAAGAACAGGACCTGCGGGAAATCGGCATCAGTGACCCACAGCAC
CGGCGAAAGCTGCTCCAGGCTGCACGCTCTCTGCCCAAGGTAAAGGCCCTGGGCTATGATGGGA
ACAGTCCCCCATCCGTCCCCTCCTGGCTGGACTCCCTGGGGCTGCAGGACTACGTCCACTCCTT
CCTGTCCAGTGGCTACAGCTCCATCGACACTGTGAAGAACCTCTGGGAGCTGGAGCTTGTCAAC
GTCCTGAAGGTCCACCTGCTGGGCCATCGCAAGCGCATCATCGCCTCCCTGGCAGAGAGGCCCT
ATGAGGAGCCGCCGCAGAAGCCCCCAAGGTTTTCCCAGCTGAGGTGCCAAGACTTGATTTCCCA
GACCTCATCCCCACTGAGCCAGAATGATTCCTGCACCGGGCGGTCAGCAGACCTGCTGCTGCCT
TCTGGGGACACAGGCAGGAGGCGGCATGACAGTCTTCAGGACCCTGCAGCACCCTCTCGAGCAG
AGCGTTTCAGAATCCAGGAGGAGCACCGCGAGGCCAAACTAACCCTGCGGCCGCCCAGCCTAGC
CGCCCCCTACGCCCCCGTGCAGAGCTGGCAACACCAGCCGGAGAAGCTCATCTTTGAGTCCTGC
GGTTACGAGGCCAATTATCTGGGCTCCATGCTGATCAAAGACCTGCGCGGGACAGAATCCACGC
AGGACGCCTGCGCCAAGATGCGGAAATCCACCGAGCACATGAAGAAGATCCCCACCATCATCCT
GTCTATCACATACAAAGGTGTCAAGTTCATCGATGCTTCCAACAAGAACGTCATCGCAGAGCAC
GAGATCCGCAACATTTCCTGTGCAGCCCAGGACCCGGAGGACCTCTGTACCTTTGCCTACATCA
CCAAGGACCTGCAGACTAGCCACCACTACTGCCACGTGTTCAGCACAGTAGATGTGAACCTGAC
CTATGAGATCATCCTTACACTGGGCCAGGCGTTCGAGGTGGCCTATCAGCTGGCCCTACAGGCC
CAGAAGTCCAGGTCGCTGGGGGCCTCTGCTGTCGAGATGATCGAAACAAAATCTTCCAAACCGG
TGCCTAAGCCTCGGGTGGGCACAAGGAAGTCCGCACTGGAACCACCCGACACTGACCAAGAGGC
CCAGTCCCACGCCAGTGTCTCCTGGATTGTGGACCCAAAGCCAGACTCCAAGCGGAGCCTCAGC
ACCAAGTATGAGACCACTATCTTCTAACAGCCCACCCTGTCTCCACTAGTCTCACTGTGCCTTT
GCCGTCCGATCTTTCTGCTGTCTCGACTCTCTCCTTCCAGCTGCCACCACCACGGCCCCACCTT
CGCAGGGACCTGCCCCCCTTCCGGGCAGCAGCTGTAGATGCTACACTCACAGCTCTTGTACCTA
ATACCACCGAACACTGTGAATTCTCCCCTTGGGCTGAGGACAGCTGGGGGGGCGAGTTGCCTTT
GAGGTGGGCATGAGGGGCAGAGGGCTCTGCTGCGACCAGGAGCCCTGCAGTGGGCACTGCATTG
CTGAGGGGTAGGCTTTGGGCGAAGCCAGTGGGCGCCTGAGAGCTCTGTGGAGCTGGCTGTTCTC
TCCCGTCTTCCATCCTGAGCCACAGCTGGATGCCAAGAGCTAACTCCGTTCACCTTTCCTGACA
CAACCAACCACTGTGACCACCTGGTGCCAGAGCACCCTGCACTCTGCCCAAGCTGGATGCAGGG
CGCGGGGCTGTGAGCATCTGAGGCCCACAGGCTGGCGTCTCAGGGCTCCTTGTCCTGGCGGGCC
TTCCATGCCAAGGAAGCAGGGGCCTGTGGTTGTCCCCTCCTCACATCTCACCACTGAGAACAGG
TGTAGCAGTCCTGGCTCTGCAGCCCAGCTCACGAGGAGGAGGCCCTTTTTGTAGGATCCAGCTC
AAAGGGGGCCTGGGTCCCACACACGTGCACTCTTCTCCCCCAGAGCAGCTGCCTGGGCACAGGG
CCCAACCAAGCACCTCCCGTGGTCTCTGGGAGCTTTGACTCTTCTCCCCAGTCTGGGGACCTGA
GAGAGCCACTGTCCAGTGCCCGACTGGCCTCTCCCCCAACTCTCCACTCCTCTGGGAAGGGCCA
GGCCATCTCTCCTCACAGCCGCTGGACAGTGAGCGAGTCCTGGAGGAAGGCCGCACTCCCCACC
GTGGGCGGCCACGGTTCAAGGGCAGGAGACAGGAAAGAAGTGATTTCATGGGAAGTGGCACGTG
GCAGATGTAGCGCAGTCCAGTGCAAAAGCCAGCAATTAGAGCCACCCCCGCGGTGTAAACCAGG
TTGGGTCCTTCTGCTGCCTGCCTGTCCTTGTACCTTCCTGAGCCAGAGGCAGTGATGGGCTGGG
GGGCAAGGGCCTTTCTGTCCTGCTTCTGTTTCCTGTCAGTCTCCTCCGCCTTGTGCAGGACCCT
TGGTTAACCCTCTCCTCCCCCCATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACT
GTGCTGCGGAAACAGCCGTGGGGAGCAGGCTCTGCCCCCTGCCACCGCCACCTGGCCTGCAGCT
CTGAAGACCAGCCCAGCCGCCTGCAGGACCTCCTCTCAGCTGCTTGGCCCGGGTCTGCCACCAC
CAGGTCCTGCAGAGTGAGCCCTGCCTGGTGCGGAGGAGCACTCCAGGCCTCTAGCAGATGAGCC
TGGAAGCCCAGAGGGTCAAGAAGTGACTTGTCCAGAATAACATGTTTTTAATAGGAAAAAAAAT
CTTTTTATAAAATGAACTTTTAACACTTGGCTCAAACCTCTAGGTAAAACTGCCAATCTTTAGA
CAAATAACCATGGGGTCAGAGGACTGAGGGACTGAGATTAGCCAAAAAGCCAGTCGGGAAAGCC
CTGTCCTCAGCTTGGGGCCTTGGTCTGGCCTGGGATGTGAGGAGCGGGCAGTGGCCCTGGGTGA
GTTGGAAGGAGCAGGCCCAGGTGAGGGGATTCCTGGGGGGCTTCTTCTCAGACCCAGCAAGGTG
GCTGCTGTCCTTCACAGACTGCTCAGTTTCTGTCCCCATCTAGAGCGGGACTCGGGTTCTTCAG
TAAGAACACAGCCTCAGAGGCTGAAGCAGAAGTTTCTGGTCTGCTCCTGGGGTTCCCAGTGTGA
AGGTTCAGGGGCCAGAAAGGAGGGGGGCAAACAATCTGGTGCCAGAATATCACGGCTGGTACTG
GGAGCTCCCGGTGGCTCACCTGGTGGGCATTGGGCACTGCCCAGGCTGGCTGCCACACATGCCC
CGCTGATATTCTGCCTCAACCAAGTTAAACGGGAAAATCGCGTTTTTTGGGCATTAATGGGAAG
GTCAGCTAAGATTGCTACTTGCCAATTGGCGACTTGCCTGACCAGGTCTGTGTGATTGGGCTGC
TTTTGGTTCTCTGCGTTATGGTTTGAGTGTTGAGTTCTCCACTGCTGGGCACATGTGGCTCCAG
GGGTGGAAAAAGTAGATGAGGTGACAGTCCATGTGATTCCTCCTGTGTGGCCTTGAGGGCAGGC
GTGTCCTGGCATTCCACTGCTGCTTAACCCTTGCTTTCATCTGAAAGTTACTTGGGGTTGTTCT
TCCTGGGCTGGAGAATTGAAGGGGTGGAGGCAAAGCCAGGCCAGCTGCCCTCCAGTCTCTTCCA
GGGCAGGGGGCAGCAGGCAGCGCGCTGCGGGGTCAGCAGGCCTGGTTCGCTGTGGTCCTGGGTG
AGTATCCAGGCCTCAGCGGCGCTTCTCTCCCAGCAAAGGCTGTGAGTCTGTGCTGGTGTGCATG
TGCAAGGGCGTGCCCTCGGGCACCTTCCCAGCCCCAGTGGTCACGGAGCGGAGGACAGCAGGCC
GTGTCCGTCCGCTGAGCGCCCAGACAGTGCCGTGGGGCGCAGCCCCCTCTGCAGTAGAGGCAGG
TTGTCCTCCACTTCCAGACTAAACAAGGGCCTGACACCTTGAAGTTGCACCTGGCCATAGGGAT
CCTCCCCTCAGGTCACACCACGTGGGAAAGACGCAG

hide sequence

RefSeq Acc Id:

XM_013355769 ⟹ XP_013211223

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,615 - 39,865,004 (+)	NCBI
SpeTri2.0	NW_004936476	24,093,838 - 24,200,611 (-)	NCBI

Sequence:

show sequence

ATGTGGAGAGGCCCAAATGTGAACTGTGTTGACAGCACTGGCTACACACCGCTGCACCACGCTG
CTCTGAACGGCCATAAGGATGTGGTGGAAGTTCTTCTGAGGAACGATGCACTGACCAATGTGGC
TGACTCTAAAGGCTGTTACCCTCTGCACTTGGCAGCCTGGAAAGGAGATGCCCAGATAGTGCGG
TTGCTCATCCATCAAGGGCCTTCACACACCAGAGTCAATGAACAGAACAATGACAACGAGACGG
CCCTGCACTGTGCAGCACAGTATGGCCACACGGAGGTGGTGAAGGTGCTCTTGGAGGAGCTCAC
AGACCCCACCATGCGAAACAACAAATTCGAGACCCCCCTGGACCTGGCAGCGCTCTACGGGCGG
CTGGAGGTGGTGAAGATGCTCCTCAATGCGCACCCCAACCTCTTGAGTTGCAACACTAAGAAGC
ACACCCCGCTGCACCTTGCAGCAAGGAATGGCCACAGGGCTGTGGTCCAGGTCCTCCTGGATGC
TGGCATGGACAGCAACTACCAGACGGAGATGGGCAGTGCTTTGCATGAGGCTGCTTTGTTTGGC
AAGACCGATGTGGTACAAATCCTGCTGGCTGCAGGAATTGATGTCAACATAAAAGATAACCATG
GACTGACTGCCCTAGACACTGTGCGGGAACTGCCTTCTCAGAAGAGCCAGCAGATAGCAGCACT
TATTGAAGATCACATGACTGGAAAGAGAAGTACAAAAGACATAGAGAAAATCTCCACGCCCCAG
CCAGCTCTCCTCTCCATCGCGGACTCCGTAGCACCAAAGTCTCAGGGTGATGTGGAAAAAGCAG
TAACTGAACTGATCATCGATTTTGACCCAAATACTGAAGAGGAGGGTCCCTACGAGGCGCTGTA
CAACGCTGTTTCCTGCCATTCACTAGACAGCATGGCCAGCGGGCGGTCATCTGACCGGGACTCT
GTGAACAAGGAGACCGAGGCAGGGGGAGCAAGAACCGCTGGAGTGAGGCCTAGAGAACGTCCAC
CGCCTCCAGCAAAGCCACCACCAGATGAAGAGGAGGAAGACCGCATAGATAAGAAGTATTTTCC
CTTGACAGCTTCTGAGGTCCTGGCCACGAGACCCAGGATTCAGGGGAGTGCAGCCCAGGAAGAG
GACGAGCACCCTTACGAGCTGCTGTTAACAGCAGAGACAAAGAAGCTGGTGTCAGTGGACGGAA
AAGCAAAAGACCACAGGCGGAGCAGCAGCAGTCGGAGCCAGGACTCTGCAGAGGGGCAGGACGG
GCAGGTCCCCGAGCAGTTCTCCGGTCTCCTCCACGGCTCCTCCCCGGTGTGTGAGGTGGGGCAG
GACCCTTTCCAGCTGCTCTCCACCACAGGCCAGAGCCATCCAGACGGGTCCCCCCAGCAGGGCG
CCTGCCACGAGGCCAGCATGCAGCTGGAGGAGTCGGGTGTGCACACTCCAGAAGCCTCCCAGCC
CTGTGGTCTGGACCAGAGCAAGAGAACAGGCTACCCAGCGGGCCTGCCCCCCACCAGCAGCCTG
TCGCACCCCGAAACTTGGACTCGCACGGCATCCCCGCACCCTGGTGGTGCTGAGGAAGAAGGAG
ACCGGAGTGGGGCCAGAAGCCGAGCCCCTCCCACCAGCAAACCCAAAGCCGAGCTCAAACTCAG
CCGCAGCTTGTCCAAGTCTGACTCTGATCTCCTGACCTGCTCACCCACCGAGGACGCGACGATG
GGGAGCCGGAGTGAGTCTCTGTCCAACTGTAGCATTGGGAAGAAGAGGCTGGAGAAGTCGCCTT
CCTTCGCCTCTGAGTGGGATGAGATTGAGAAAATCATGAGCTCTATTGGAGAAGGGATCGACTT
TTCTCAGGAACAGCAGAAGATCTCAGGTTCACGGACGCTGGAGCAGAGCGTCGGGGAGTGGCTG
GAGTCGGTTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACGATGTCCGCT
TCCTGGGATCTAACGTGATGGAAGAACAGGACCTGCGGGAAATCGGCATCAGTGACCCACAGCA
CCGGCGAAAGCTGCTCCAGGCTGCACGCTCTCTGCCCAAGGTAAAGGCCCTGGGCTATGATGGG
AACAGTCCCCCATCCGTCCCCTCCTGGCTGGACTCCCTGGGGCTGCAGGACTACGTCCACTCCT
TCCTGTCCAGTGGCTACAGCTCCATCGACACTGTGAAGAACCTCTGGGAGCTGGAGCTTGTCAA
CGTCCTGAAGGTCCACCTGCTGGGCCATCGCAAGCGCATCATCGCCTCCCTGGCAGAGAGGCCC
TATGAGGAGCCGCCGCAGAAGCCCCCAAGGTTTTCCCAGCTGAGGTGCCAAGACTTGATTTCCC
AGACCTCATCCCCACTGAGCCAGAATGATTCCTGCACCGGGCGGTCAGCAGACCTGCTGCTGCC
TTCTGGGGACACAGGCAGGAGGCGGCATGACAGTCTTCAGGACCCTGCAGCACCCTCTCGAGCA
GAGCGTTTCAGAATCCAGGAGGAGCACCGCGAGGCCAAACTAACCCTGCGGCCGCCCAGCCTAG
CCGCCCCCTACGCCCCCGTGCAGAGCTGGCAACACCAGCCGGAGAAGCTCATCTTTGAGTCCTG
CGGTTACGAGGCCAATTATCTGGGCTCCATGCTGATCAAAGACCTGCGCGGGACAGAATCCACG
CAGGACGCCTGCGCCAAGATGCGGAAATCCACCGAGCACATGAAGAAGATCCCCACCATCATCC
TGTCTATCACATACAAAGGTGTCAAGTTCATCGATGCTTCCAACAAGAACGTCATCGCAGAGCA
CGAGATCCGCAACATTTCCTGTGCAGCCCAGGACCCGGAGGACCTCTGTACCTTTGCCTACATC
ACCAAGGACCTGCAGACTAGCCACCACTACTGCCACGTGTTCAGCACAGTAGATGTGAACCTGA
CCTATGAGATCATCCTTACACTGGGCCAGGCGTTCGAGGTGGCCTATCAGCTGGCCCTACAGGC
CCAGAAGTCCAGGTCGCTGGGGGCCTCTGCTGTCGAGATGATCGAAACAAAATCTTCCAAACCG
GTGCCTAAGCCTCGGGTGGGCACAAGGAAGTCCGCACTGGAACCACCCGACACTGACCAAGAGG
CCCAGTCCCACGCCAGTGTCTCCTGGATTGTGGACCCAAAGCCAGACTCCAAGCGGAGCCTCAG
CACCAAGTATGAGACCACTATCTTCTAACAGCCCACCCTGTCTCCACTAGTCTCACTGTGCCTT
TGCCGTCCGATCTTTCTGCTGTCTCGACTCTCTCCTTCCAGCTGCCACCACCACGGCCCCACCT
TCGCAGGGACCTGCCCCCCTTCCGGGCAGCAGCTGTAGATGCTACACTCACAGCTCTTGTACCT
AATACCACCGAACACTGTGAATTCTCCCCTTGGGCTGAGGACAGCTGGGGGGGCGAGTTGCCTT
TGAGGTGGGCATGAGGGGCAGAGGGCTCTGCTGCGACCAGGAGCCCTGCAGTGGGCACTGCATT
GCTGAGGGGTAGGCTTTGGGCGAAGCCAGTGGGCGCCTGAGAGCTCTGTGGAGCTGGCTGTTCT
CTCCCGTCTTCCATCCTGAGCCACAGCTGGATGCCAAGAGCTAACTCCGTTCACCTTTCCTGAC
ACAACCAACCACTGTGACCACCTGGTGCCAGAGCACCCTGCACTCTGCCCAAGCTGGATGCAGG
GCGCGGGGCTGTGAGCATCTGAGGCCCACAGGCTGGCGTCTCAGGGCTCCTTGTCCTGGCGGGC
CTTCCATGCCAAGGAAGCAGGGGCCTGTGGTTGTCCCCTCCTCACATCTCACCACTGAGAACAG
GTGTAGCAGTCCTGGCTCTGCAGCCCAGCTCACGAGGAGGAGGCCCTTTTTGTAGGATCCAGCT
CAAAGGGGGCCTGGGTCCCACACACGTGCACTCTTCTCCCCCAGAGCAGCTGCCTGGGCACAGG
GCCCAACCAAGCACCTCCCGTGGTCTCTGGGAGCTTTGACTCTTCTCCCCAGTCTGGGGACCTG
AGAGAGCCACTGTCCAGTGCCCGACTGGCCTCTCCCCCAACTCTCCACTCCTCTGGGAAGGGCC
AGGCCATCTCTCCTCACAGCCGCTGGACAGTGAGCGAGTCCTGGAGGAAGGCCGCACTCCCCAC
CGTGGGCGGCCACGGTTCAAGGGCAGGAGACAGGAAAGAAGTGATTTCATGGGAAGTGGCACGT
GGCAGATGTAGCGCAGTCCAGTGCAAAAGCCAGCAATTAGAGCCACCCCCGCGGTGTAAACCAG
GTTGGGTCCTTCTGCTGCCTGCCTGTCCTTGTACCTTCCTGAGCCAGAGGCAGTGATGGGCTGG
GGGGCAAGGGCCTTTCTGTCCTGCTTCTGTTTCCTGTCAGTCTCCTCCGCCTTGTGCAGGACCC
TTGGTTAACCCTCTCCTCCCCCCATTGTTTGCTTCTGCCAAGCTGAGCCACTGAGGAACCACAC
TGTGCTGCGGAAACAGCCGTGGGGAGCAGGCTCTGCCCCCTGCCACCGCCACCTGGCCTGCAGC
TCTGAAGACCAGCCCAGCCGCCTGCAGGACCTCCTCTCAGCTGCTTGGCCCGGGTCTGCCACCA
CCAGGTCCTGCAGAGTGAGCCCTGCCTGGTGCGGAGGAGCACTCCAGGCCTCTAGCAGATGAGC
CTGGAAGCCCAGAGGGTCAAGAAGTGACTTGTCCAGAATAACATGTTTTTAATAGGAAAAAAAA
TCTTTTTATAAAATGAACTTTTAACACTTGGCTCAAACCTCTAGGTAAAACTGCCAATCTTTAG
ACAAATAACCATGGGGTCAGAGGACTGAGGGACTGAGATTAGCCAAAAAGCCAGTCGGGAAAGC
CCTGTCCTCAGCTTGGGGCCTTGGTCTGGCCTGGGATGTGAGGAGCGGGCAGTGGCCCTGGGTG
AGTTGGAAGGAGCAGGCCCAGGTGAGGGGATTCCTGGGGGGCTTCTTCTCAGACCCAGCAAGGT
GGCTGCTGTCCTTCACAGACTGCTCAGTTTCTGTCCCCATCTAGAGCGGGACTCGGGTTCTTCA
GTAAGAACACAGCCTCAGAGGCTGAAGCAGAAGTTTCTGGTCTGCTCCTGGGGTTCCCAGTGTG
AAGGTTCAGGGGCCAGAAAGGAGGGGGGCAAACAATCTGGTGCCAGAATATCACGGCTGGTACT
GGGAGCTCCCGGTGGCTCACCTGGTGGGCATTGGGCACTGCCCAGGCTGGCTGCCACACATGCC
CCGCTGATATTCTGCCTCAACCAAGTTAAACGGGAAAATCGCGTTTTTTGGGCATTAATGGGAA
GGTCAGCTAAGATTGCTACTTGCCAATTGGCGACTTGCCTGACCAGGTCTGTGTGATTGGGCTG
CTTTTGGTTCTCTGCGTTATGGTTTGAGTGTTGAGTTCTCCACTGCTGGGCACATGTGGCTCCA
GGGGTGGAAAAAGTAGATGAGGTGACAGTCCATGTGATTCCTCCTGTGTGGCCTTGAGGGCAGG
CGTGTCCTGGCATTCCACTGCTGCTTAACCCTTGCTTTCATCTGAAAGTTACTTGGGGTTGTTC
TTCCTGGGCTGGAGAATTGAAGGGGTGGAGGCAAAGCCAGGCCAGCTGCCCTCCAGTCTCTTCC
AGGGCAGGGGGCAGCAGGCAGCGCGCTGCGGGGTCAGCAGGCCTGGTTCGCTGTGGTCCTGGGT
GAGTATCCAGGCCTCAGCGGCGCTTCTCTCCCAGCAAAGGCTGTGAGTCTGTGCTGGTGTGCAT
GTGCAAGGGCGTGCCCTCGGGCACCTTCCCAGCCCCAGTGGTCACGGAGCGGAGGACAGCAGGC
CGTGTCCGTCCGCTGAGCGCCCAGACAGTGCCGTGGGGCGCAGCCCCCTCTGCAGTAGAGGCAG
GTTGTCCTCCACTTCCAGACTAAACAAGGGCCTGACACCTTGAAGTTGCACCTGGCCATAGGGA
TCCTCCCCTCAGGTCACACCACGTGGGAAAGACGCAG

hide sequence

RefSeq Acc Id:

XM_013355770 ⟹ XP_013211224

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,004 (+)	NCBI
SpeTri2.0	NW_004936476	24,093,838 - 24,200,611 (-)	NCBI

Sequence:

show sequence

ATGTGGAGAGGCCCAAATGTGAACTGTGTTGACAGCACTGGCTACACACCGCTGCACCACGCTG
CTCTGAACGGCCATAAGGATGTGGTGGAAGTTCTTCTGAGGAACGATGCACTGACCAATGTGGC
TGACTCTAAAGGCTGTTACCCTCTGCACTTGGCAGCCTGGAAAGGAGATGCCCAGATAGTGCGG
TTGCTCATCCATCAAGGGCCTTCACACACCAGAGTCAATGAACAGAATGCTCTTGAGATCAAAG
AACTCAAAAAGTACGGCCCCTTTGACCCTTATATCAATGCCAAGAACAATGACAACGAGACGGC
CCTGCACTGTGCAGCACAGTATGGCCACACGGAGGTGGTGAAGGTGCTCTTGGAGGAGCTCACA
GACCCCACCATGCGAAACAACAAATTCGAGACCCCCCTGGACCTGGCAGCGCTCTACGGGCGGC
TGGAGGTGGTGAAGATGCTCCTCAATGCGCACCCCAACCTCTTGAGTTGCAACACTAAGAAGCA
CACCCCGCTGCACCTTGCAGCAAGGAATGGCCACAGGGCTGTGGTCCAGGTCCTCCTGGATGCT
GGCATGGACAGCAACTACCAGACGGAGATGGGCAGTGCTTTGCATGAGGCTGCTTTGTTTGGCA
AGACCGATGTGGTACAAATCCTGCTGGCTGCAGGAATTGATGTCAACATAAAAGATAACCATGG
ACTGACTGCCCTAGACACTGTGCGGGAACTGCCTTCTCAGAAGAGCCAGCAGATAGCAGCACTT
ATTGAAGATCACATGACTGGAAAGAGAAGTACAAAAGACATAGAGAAAATCTCCACGCCCCAGC
CAGCTCTCCTCTCCATCGCGGACTCCGTAGCACCAAAGTCTCAGGGTGATGTGGAAAAAGCAGT
AACTGAACTGATCATCGATTTTGACCCAAATACTGAAGAGGAGGGTCCCTACGAGGCGCTGTAC
AACGCTGTTTCCTGCCATTCACTAGACAGCATGGCCAGCGGGCGGTCATCTGACCGGGACTCTG
TGAACAAGGAGACCGAGGCAGGGGGAGCAAGAACCGCTGGAGTGAGGCCTAGAGAACGTCCACC
GCCTCCAGCAAAGCCACCACCAGATGAAGAGGAGGAAGACCGCATAGATAAGAAGTATTTTCCC
TTGACAGCTTCTGAGGTCCTGGCCACGAGACCCAGGATTCAGGGGAGTGCAGCCCAGGAAGAGG
ACGAGCACCCTTACGAGCTGCTGTTAACAGCAGAGACAAAGAAGCTGGTGTCAGTGGACGGAAA
AGCAAAAGACCACAGGCGGAGCAGCAGCAGTCGGAGCCAGGACTCTGCAGAGGGGCAGGACGGG
CAGGTCCCCGAGCAGTTCTCCGGTCTCCTCCACGGCTCCTCCCCGGTGTGTGAGGTGGGGCAGG
ACCCTTTCCAGCTGCTCTCCACCACAGGCCAGAGCCATCCAGACGGGTCCCCCCAGCAGGGCGC
CTGCCACGAGGCCAGCATGCAGCTGGAGGAGTCGGGTGTGCACACTCCAGAAGCCTCCCAGCCC
TGTGGTCTGGACCAGAGCAAGAGAACAGGCTACCCAGCGGGCCTGCCCCCCACCAGCAGCCTGT
CGCACCCCGAAACTTGGACTCGCACGGCATCCCCGCACCCTGGTGGTGCTGAGGAAGAAGGAGA
CCGGAGTGGGGCCAGAAGCCGAGCCCCTCCCACCAGCAAACCCAAAGCCGAGCTCAAACTCAGC
CGCAGCTTGTCCAAGTCTGACTCTGATCTCCTGACCTGCTCACCCACCGAGGACGCGACGATGG
GGAGCCGGAGTGAGTCTCTGTCCAACTGTAGCATTGGGAAGAAGAGGCTGGAGAAGTCGCCTTC
CTTCGCCTCTGAGTGGGATGAGATTGAGAAAATCATGAGCTCTATTGGAGAAGGGATCGACTTT
TCTCAGGAACAGCAGAAGATCTCAGGTTCACGGACGCTGGAGCAGAGCGTCGGGGAGTGGCTGG
AGTCGGTTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACGATGTCCGCTT
CCTGGGATCTAACGTGATGGAAGAACAGGACCTGCGGGAAATCGGCATCAGTGACCCACAGCAC
CGGCGAAAGCTGCTCCAGGCTGCACGCTCTCTGCCCAAGGTAAAGGCCCTGGGCTATGATGGGA
ACAGTCCCCCATCCGTCCCCTCCTGGCTGGACTCCCTGGGGCTGCAGGACTACGTCCACTCCTT
CCTGTCCAGTGGCTACAGCTCCATCGACACTGTGAAGAACCTCTGGGAGCTGGAGCTTGTCAAC
GTCCTGAAGGTCCACCTGCTGGGCCATCGCAAGCGCATCATCGCCTCCCTGGCAGAGAGGCCCT
ATGAGGAGCCGCCGCAGAAGCCCCCAAGGTTTTCCCAGCTGAGGTGCCAAGACTTGATTTCCCA
GACCTCATCCCCACTGAGCCAGAATGATTCCTGCACCGGGCGGTCAGCAGACCTGCTGCTGCCT
TCTGGGGACACAGGCAGGAGGCGGCATGACAGTCTTCAGGACCCTGCAGCACCCTCTCGAGCAG
AGCGTTTCAGAATCCAGGAGGAGCACCGCGAGGCCAAACTAACCCTGCGGCCGCCCAGCCTAGC
CGCCCCCTACGCCCCCGTGCAGAGCTGGCAACACCAGCCGGAGAAGCTCATCTTTGAGTCCTGC
GGTTACGAGGCCAATTATCTGGGCTCCATGCTGATCAAAGACCTGCGCGGGACAGAATCCACGC
AGGACGCCTGCGCCAAGATGCGGAAATCCACCGAGCACATGAAGAAGATCCCCACCATCATCCT
GTCTATCACATACAAAGGTGTCAAGTTCATCGATGCTTCCAACAAGAACGTCATCGCAGAGCAC
GAGATCCGCAACATTTCCTGTGCAGCCCAGGACCCGGAGGACCTCTGTACCTTTGCCTACATCA
CCAAGGACCTGCAGACTAGCCACCACTACTGCCACGTGTTCAGCACAGTAGATGTGAACCTGAC
CTATGAGATCATCCTTACACTGGGCCAGGCGTTCGAGGTGGCCTATCAGCTGGCCCTACAGGCC
CAGAAGTCCAGGTCGCTGGGGGCCTCTGCTGTCGAGATGATCGAAACAAAATCTTCCAAACCGG
TGCCTAAGCCTCGGGTGGGCACAAGGAAGTCCGCAGTACCGCTGACCCCCGATAGTCGCTGTTG
TCACTGTCACTCCTGCACCACCCACCGCCCCTCCTACCTGCCGCTGCCGTCTGTTAGTCCTGGA
GTCAAGCTGGAACCACCCGACACTGACCAAGAGGCCCAGTCCCACGCCAGTGTCTCCTGGATTG
TGGACCCAAAGCCAGACTCCAAGCGGAGCCTCAGCACCAAGTATGAGACCACTATCTTCTAACA
GCCCACCCTGTCTCCACTAGTCTCACTGTGCCTTTGCCGTCCGATCTTTCTGCTGTCTCGACTC
TCTCCTTCCAGCTGCCACCACCACGGCCCCACCTTCGCAGGGACCTGCCCCCCTTCCGGGCAGC
AGCTGTAGATGCTACACTCACAGCTCTTGTACCTAATACCACCGAACACTGTGAATTCTCCCCT
TGGGCTGAGGACAGCTGGGGGGGCGAGTTGCCTTTGAGGTGGGCATGAGGGGCAGAGGGCTCTG
CTGCGACCAGGAGCCCTGCAGTGGGCACTGCATTGCTGAGGGGTAGGCTTTGGGCGAAGCCAGT
GGGCGCCTGAGAGCTCTGTGGAGCTGGCTGTTCTCTCCCGTCTTCCATCCTGAGCCACAGCTGG
ATGCCAAGAGCTAACTCCGTTCACCTTTCCTGACACAACCAACCACTGTGACCACCTGGTGCCA
GAGCACCCTGCACTCTGCCCAAGCTGGATGCAGGGCGCGGGGCTGTGAGCATCTGAGGCCCACA
GGCTGGCGTCTCAGGGCTCCTTGTCCTGGCGGGCCTTCCATGCCAAGGAAGCAGGGGCCTGTGG
TTGTCCCCTCCTCACATCTCACCACTGAGAACAGGTGTAGCAGTCCTGGCTCTGCAGCCCAGCT
CACGAGGAGGAGGCCCTTTTTGTAGGATCCAGCTCAAAGGGGGCCTGGGTCCCACACACGTGCA
CTCTTCTCCCCCAGAGCAGCTGCCTGGGCACAGGGCCCAACCAAGCACCTCCCGTGGTCTCTGG
GAGCTTTGACTCTTCTCCCCAGTCTGGGGACCTGAGAGAGCCACTGTCCAGTGCCCGACTGGCC
TCTCCCCCAACTCTCCACTCCTCTGGGAAGGGCCAGGCCATCTCTCCTCACAGCCGCTGGACAG
TGAGCGAGTCCTGGAGGAAGGCCGCACTCCCCACCGTGGGCGGCCACGGTTCAAGGGCAGGAGA
CAGGAAAGAAGTGATTTCATGGGAAGTGGCACGTGGCAGATGTAGCGCAGTCCAGTGCAAAAGC
CAGCAATTAGAGCCACCCCCGCGGTGTAAACCAGGTTGGGTCCTTCTGCTGCCTGCCTGTCCTT
GTACCTTCCTGAGCCAGAGGCAGTGATGGGCTGGGGGGCAAGGGCCTTTCTGTCCTGCTTCTGT
TTCCTGTCAGTCTCCTCCGCCTTGTGCAGGACCCTTGGTTAACCCTCTCCTCCCCCCATTGTTT
GCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACAGCCGTGGGGAGCAGG
CTCTGCCCCCTGCCACCGCCACCTGGCCTGCAGCTCTGAAGACCAGCCCAGCCGCCTGCAGGAC
CTCCTCTCAGCTGCTTGGCCCGGGTCTGCCACCACCAGGTCCTGCAGAGTGAGCCCTGCCTGGT
GCGGAGGAGCACTCCAGGCCTCTAGCAGATGAGCCTGGAAGCCCAGAGGGTCAAGAAGTGACTT
GTCCAGAATAACATGTTTTTAATAGGAAAAAAAATCTTTTTATAAAATGAACTTTTAACACTTG
GCTCAAACCTCTAGGTAAAACTGCCAATCTTTAGACAAATAACCATGGGGTCAGAGGACTGAGG
GACTGAGATTAGCCAAAAAGCCAGTCGGGAAAGCCCTGTCCTCAGCTTGGGGCCTTGGTCTGGC
CTGGGATGTGAGGAGCGGGCAGTGGCCCTGGGTGAGTTGGAAGGAGCAGGCCCAGGTGAGGGGA
TTCCTGGGGGGCTTCTTCTCAGACCCAGCAAGGTGGCTGCTGTCCTTCACAGACTGCTCAGTTT
CTGTCCCCATCTAGAGCGGGACTCGGGTTCTTCAGTAAGAACACAGCCTCAGAGGCTGAAGCAG
AAGTTTCTGGTCTGCTCCTGGGGTTCCCAGTGTGAAGGTTCAGGGGCCAGAAAGGAGGGGGGCA
AACAATCTGGTGCCAGAATATCACGGCTGGTACTGGGAGCTCCCGGTGGCTCACCTGGTGGGCA
TTGGGCACTGCCCAGGCTGGCTGCCACACATGCCCCGCTGATATTCTGCCTCAACCAAGTTAAA
CGGGAAAATCGCGTTTTTTGGGCATTAATGGGAAGGTCAGCTAAGATTGCTACTTGCCAATTGG
CGACTTGCCTGACCAGGTCTGTGTGATTGGGCTGCTTTTGGTTCTCTGCGTTATGGTTTGAGTG
TTGAGTTCTCCACTGCTGGGCACATGTGGCTCCAGGGGTGGAAAAAGTAGATGAGGTGACAGTC
CATGTGATTCCTCCTGTGTGGCCTTGAGGGCAGGCGTGTCCTGGCATTCCACTGCTGCTTAACC
CTTGCTTTCATCTGAAAGTTACTTGGGGTTGTTCTTCCTGGGCTGGAGAATTGAAGGGGTGGAG
GCAAAGCCAGGCCAGCTGCCCTCCAGTCTCTTCCAGGGCAGGGGGCAGCAGGCAGCGCGCTGCG
GGGTCAGCAGGCCTGGTTCGCTGTGGTCCTGGGTGAGTATCCAGGCCTCAGCGGCGCTTCTCTC
CCAGCAAAGGCTGTGAGTCTGTGCTGGTGTGCATGTGCAAGGGCGTGCCCTCGGGCACCTTCCC
AGCCCCAGTGGTCACGGAGCGGAGGACAGCAGGCCGTGTCCGTCCGCTGAGCGCCCAGACAGTG
CCGTGGGGCGCAGCCCCCTCTGCAGTAGAGGCAGGTTGTCCTCCACTTCCAGACTAAACAAGGG
CCTGACACCTTGAAGTTGCACCTGGCCATAGGGATCCTCCCCTCAGGTCACACCACGTGGGAAA
GACGCAG

hide sequence

RefSeq Acc Id:

XM_013355772 ⟹ XP_013211226

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,004 (+)	NCBI
SpeTri2.0	NW_004936476	24,093,838 - 24,200,611 (-)	NCBI

Sequence:

show sequence

ATGTGGAGAGGCCCAAATGTGAACTGTGTTGACAGCACTGGCTACACACCGCTGCACCACGCTG
CTCTGAACGGCCATAAGGATGTGGTGGAAGTTCTTCTGAGGAACGATGCACTGACCAATGTGGC
TGACTCTAAAGGCTGTTACCCTCTGCACTTGGCAGCCTGGAAAGGAGATGCCCAGATAGTGCGG
TTGCTCATCCATCAAGGGCCTTCACACACCAGAGTCAATGAACAGAACAATGACAACGAGACGG
CCCTGCACTGTGCAGCACAGTATGGCCACACGGAGGTGGTGAAGGTGCTCTTGGAGGAGCTCAC
AGACCCCACCATGCGAAACAACAAATTCGAGACCCCCCTGGACCTGGCAGCGCTCTACGGGCGG
CTGGAGGTGGTGAAGATGCTCCTCAATGCGCACCCCAACCTCTTGAGTTGCAACACTAAGAAGC
ACACCCCGCTGCACCTTGCAGCAAGGAATGGCCACAGGGCTGTGGTCCAGGTCCTCCTGGATGC
TGGCATGGACAGCAACTACCAGACGGAGATGGGCAGTGCTTTGCATGAGGCTGCTTTGTTTGGC
AAGACCGATGTGGTACAAATCCTGCTGGCTGCAGGAATTGATGTCAACATAAAAGATAACCATG
GACTGACTGCCCTAGACACTGTGCGGGAACTGCCTTCTCAGAAGAGCCAGCAGATAGCAGCACT
TATTGAAGATCACATGACTGGAAAGAGAAGTACAAAAGACATAGAGAAAATCTCCACGCCCCAG
CCAGCTCTCCTCTCCATCGCGGACTCCGTAGCACCAAAGTCTCAGGGTGATGTGGAAAAAGCAG
TAACTGAACTGATCATCGATTTTGACCCAAATACTGAAGAGGAGGGTCCCTACGAGGCGCTGTA
CAACGCTGTTTCCTGCCATTCACTAGACAGCATGGCCAGCGGGCGGTCATCTGACCGGGACTCT
GTGAACAAGGAGACCGAGGCAGGGGGAGCAAGAACCGCTGGAGTGAGGCCTAGAGAACGTCCAC
CGCCTCCAGCAAAGCCACCACCAGATGAAGAGGAGGAAGACCGCATAGATAAGAAGTATTTTCC
CTTGACAGCTTCTGAGGTCCTGGCCACGAGACCCAGGATTCAGGGGAGTGCAGCCCAGGAAGAG
GACGAGCACCCTTACGAGCTGCTGTTAACAGCAGAGACAAAGAAGCTGGTGTCAGTGGACGGAA
AAGCAAAAGACCACAGGCGGAGCAGCAGCAGTCGGAGCCAGGACTCTGCAGAGGGGCAGGACGG
GCAGGTCCCCGAGCAGTTCTCCGGTCTCCTCCACGGCTCCTCCCCGGTGTGTGAGGTGGGGCAG
GACCCTTTCCAGCTGCTCTCCACCACAGGCCAGAGCCATCCAGACGGGTCCCCCCAGCAGGGCG
CCTGCCACGAGGCCAGCATGCAGCTGGAGGAGTCGGGTGTGCACACTCCAGAAGCCTCCCAGCC
CTGTGGTCTGGACCAGAGCAAGAGAACAGGCTACCCAGCGGGCCTGCCCCCCACCAGCAGCCTG
TCGCACCCCGAAACTTGGACTCGCACGGCATCCCCGCACCCTGGTGGTGCTGAGGAAGAAGGAG
ACCGGAGTGGGGCCAGAAGCCGAGCCCCTCCCACCAGCAAACCCAAAGCCGAGCTCAAACTCAG
CCGCAGCTTGTCCAAGTCTGACTCTGATCTCCTGACCTGCTCACCCACCGAGGACGCGACGATG
GGGAGCCGGAGTGAGTCTCTGTCCAACTGTAGCATTGGGAAGAAGAGGCTGGAGAAGTCGCCTT
CCTTCGCCTCTGAGTGGGATGAGATTGAGAAAATCATGAGCTCTATTGGAGAAGGGATCGACTT
TTCTCAGGAACAGCAGAAGATCTCAGGTTCACGGACGCTGGAGCAGAGCGTCGGGGAGTGGCTG
GAGTCGGTTGGGCTGCAGCAGTATGAGAGCAAGTTGCTTCTGAATGGCTTTGACGATGTCCGCT
TCCTGGGATCTAACGTGATGGAAGAACAGGACCTGCGGGAAATCGGCATCAGTGACCCACAGCA
CCGGCGAAAGCTGCTCCAGGCTGCACGCTCTCTGCCCAAGGTAAAGGCCCTGGGCTATGATGGG
AACAGTCCCCCATCCGTCCCCTCCTGGCTGGACTCCCTGGGGCTGCAGGACTACGTCCACTCCT
TCCTGTCCAGTGGCTACAGCTCCATCGACACTGTGAAGAACCTCTGGGAGCTGGAGCTTGTCAA
CGTCCTGAAGGTCCACCTGCTGGGCCATCGCAAGCGCATCATCGCCTCCCTGGCAGAGAGGCCC
TATGAGGAGCCGCCGCAGAAGCCCCCAAGGTTTTCCCAGCTGAGGTGCCAAGACTTGATTTCCC
AGACCTCATCCCCACTGAGCCAGAATGATTCCTGCACCGGGCGGTCAGCAGACCTGCTGCTGCC
TTCTGGGGACACAGGCAGGAGGCGGCATGACAGTCTTCAGGACCCTGCAGCACCCTCTCGAGCA
GAGCGTTTCAGAATCCAGGAGGAGCACCGCGAGGCCAAACTAACCCTGCGGCCGCCCAGCCTAG
CCGCCCCCTACGCCCCCGTGCAGAGCTGGCAACACCAGCCGGAGAAGCTCATCTTTGAGTCCTG
CGGTTACGAGGCCAATTATCTGGGCTCCATGCTGATCAAAGACCTGCGCGGGACAGAATCCACG
CAGGACGCCTGCGCCAAGATGCGGAAATCCACCGAGCACATGAAGAAGATCCCCACCATCATCC
TGTCTATCACATACAAAGGTGTCAAGTTCATCGATGCTTCCAACAAGAACGTCATCGCAGAGCA
CGAGATCCGCAACATTTCCTGTGCAGCCCAGGACCCGGAGGACCTCTGTACCTTTGCCTACATC
ACCAAGGACCTGCAGACTAGCCACCACTACTGCCACGTGTTCAGCACAGTAGATGTGAACCTGA
CCTATGAGATCATCCTTACACTGGGCCAGGCGTTCGAGGTGGCCTATCAGCTGGCCCTACAGGC
CCAGAAGTCCAGGTCGCTGGGGGCCTCTGCTGTCGAGATGATCGAAACAAAATCTTCCAAACCG
GTGCCTAAGCCTCGGGTGGGCACAAGGAAGTCCGCAGTACCGCTGACCCCCGATAGTCGCTGTT
GTCACTGTCACTCCTGCACCACCCACCGCCCCTCCTACCTGCCGCTGCCGTCTGTTAGTCCTGG
AGTCAAGCTGGAACCACCCGACACTGACCAAGAGGCCCAGTCCCACGCCAGTGTCTCCTGGATT
GTGGACCCAAAGCCAGACTCCAAGCGGAGCCTCAGCACCAAGTATGAGACCACTATCTTCTAAC
AGCCCACCCTGTCTCCACTAGTCTCACTGTGCCTTTGCCGTCCGATCTTTCTGCTGTCTCGACT
CTCTCCTTCCAGCTGCCACCACCACGGCCCCACCTTCGCAGGGACCTGCCCCCCTTCCGGGCAG
CAGCTGTAGATGCTACACTCACAGCTCTTGTACCTAATACCACCGAACACTGTGAATTCTCCCC
TTGGGCTGAGGACAGCTGGGGGGGCGAGTTGCCTTTGAGGTGGGCATGAGGGGCAGAGGGCTCT
GCTGCGACCAGGAGCCCTGCAGTGGGCACTGCATTGCTGAGGGGTAGGCTTTGGGCGAAGCCAG
TGGGCGCCTGAGAGCTCTGTGGAGCTGGCTGTTCTCTCCCGTCTTCCATCCTGAGCCACAGCTG
GATGCCAAGAGCTAACTCCGTTCACCTTTCCTGACACAACCAACCACTGTGACCACCTGGTGCC
AGAGCACCCTGCACTCTGCCCAAGCTGGATGCAGGGCGCGGGGCTGTGAGCATCTGAGGCCCAC
AGGCTGGCGTCTCAGGGCTCCTTGTCCTGGCGGGCCTTCCATGCCAAGGAAGCAGGGGCCTGTG
GTTGTCCCCTCCTCACATCTCACCACTGAGAACAGGTGTAGCAGTCCTGGCTCTGCAGCCCAGC
TCACGAGGAGGAGGCCCTTTTTGTAGGATCCAGCTCAAAGGGGGCCTGGGTCCCACACACGTGC
ACTCTTCTCCCCCAGAGCAGCTGCCTGGGCACAGGGCCCAACCAAGCACCTCCCGTGGTCTCTG
GGAGCTTTGACTCTTCTCCCCAGTCTGGGGACCTGAGAGAGCCACTGTCCAGTGCCCGACTGGC
CTCTCCCCCAACTCTCCACTCCTCTGGGAAGGGCCAGGCCATCTCTCCTCACAGCCGCTGGACA
GTGAGCGAGTCCTGGAGGAAGGCCGCACTCCCCACCGTGGGCGGCCACGGTTCAAGGGCAGGAG
ACAGGAAAGAAGTGATTTCATGGGAAGTGGCACGTGGCAGATGTAGCGCAGTCCAGTGCAAAAG
CCAGCAATTAGAGCCACCCCCGCGGTGTAAACCAGGTTGGGTCCTTCTGCTGCCTGCCTGTCCT
TGTACCTTCCTGAGCCAGAGGCAGTGATGGGCTGGGGGGCAAGGGCCTTTCTGTCCTGCTTCTG
TTTCCTGTCAGTCTCCTCCGCCTTGTGCAGGACCCTTGGTTAACCCTCTCCTCCCCCCATTGTT
TGCTTCTGCCAAGCTGAGCCACTGAGGAACCACACTGTGCTGCGGAAACAGCCGTGGGGAGCAG
GCTCTGCCCCCTGCCACCGCCACCTGGCCTGCAGCTCTGAAGACCAGCCCAGCCGCCTGCAGGA
CCTCCTCTCAGCTGCTTGGCCCGGGTCTGCCACCACCAGGTCCTGCAGAGTGAGCCCTGCCTGG
TGCGGAGGAGCACTCCAGGCCTCTAGCAGATGAGCCTGGAAGCCCAGAGGGTCAAGAAGTGACT
TGTCCAGAATAACATGTTTTTAATAGGAAAAAAAATCTTTTTATAAAATGAACTTTTAACACTT
GGCTCAAACCTCTAGGTAAAACTGCCAATCTTTAGACAAATAACCATGGGGTCAGAGGACTGAG
GGACTGAGATTAGCCAAAAAGCCAGTCGGGAAAGCCCTGTCCTCAGCTTGGGGCCTTGGTCTGG
CCTGGGATGTGAGGAGCGGGCAGTGGCCCTGGGTGAGTTGGAAGGAGCAGGCCCAGGTGAGGGG
ATTCCTGGGGGGCTTCTTCTCAGACCCAGCAAGGTGGCTGCTGTCCTTCACAGACTGCTCAGTT
TCTGTCCCCATCTAGAGCGGGACTCGGGTTCTTCAGTAAGAACACAGCCTCAGAGGCTGAAGCA
GAAGTTTCTGGTCTGCTCCTGGGGTTCCCAGTGTGAAGGTTCAGGGGCCAGAAAGGAGGGGGGC
AAACAATCTGGTGCCAGAATATCACGGCTGGTACTGGGAGCTCCCGGTGGCTCACCTGGTGGGC
ATTGGGCACTGCCCAGGCTGGCTGCCACACATGCCCCGCTGATATTCTGCCTCAACCAAGTTAA
ACGGGAAAATCGCGTTTTTTGGGCATTAATGGGAAGGTCAGCTAAGATTGCTACTTGCCAATTG
GCGACTTGCCTGACCAGGTCTGTGTGATTGGGCTGCTTTTGGTTCTCTGCGTTATGGTTTGAGT
GTTGAGTTCTCCACTGCTGGGCACATGTGGCTCCAGGGGTGGAAAAAGTAGATGAGGTGACAGT
CCATGTGATTCCTCCTGTGTGGCCTTGAGGGCAGGCGTGTCCTGGCATTCCACTGCTGCTTAAC
CCTTGCTTTCATCTGAAAGTTACTTGGGGTTGTTCTTCCTGGGCTGGAGAATTGAAGGGGTGGA
GGCAAAGCCAGGCCAGCTGCCCTCCAGTCTCTTCCAGGGCAGGGGGCAGCAGGCAGCGCGCTGC
GGGGTCAGCAGGCCTGGTTCGCTGTGGTCCTGGGTGAGTATCCAGGCCTCAGCGGCGCTTCTCT
CCCAGCAAAGGCTGTGAGTCTGTGCTGGTGTGCATGTGCAAGGGCGTGCCCTCGGGCACCTTCC
CAGCCCCAGTGGTCACGGAGCGGAGGACAGCAGGCCGTGTCCGTCCGCTGAGCGCCCAGACAGT
GCCGTGGGGCGCAGCCCCCTCTGCAGTAGAGGCAGGTTGTCCTCCACTTCCAGACTAAACAAGG
GCCTGACACCTTGAAGTTGCACCTGGCCATAGGGATCCTCCCCTCAGGTCACACCACGTGGGAA
AGACGCAG

hide sequence

RefSeq Acc Id:

XM_040282502 ⟹ XP_040138436

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XM_040282503 ⟹ XP_040138437

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XM_040282504 ⟹ XP_040138438

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XM_040282505 ⟹ XP_040138439

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XM_040282506 ⟹ XP_040138440

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,004 (+)	NCBI

RefSeq Acc Id:

XM_040282507 ⟹ XP_040138441

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,000 (+)	NCBI

RefSeq Acc Id:

XM_040282508 ⟹ XP_040138442

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,004 (+)	NCBI

RefSeq Acc Id:

XM_040282509 ⟹ XP_040138443

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,000 (+)	NCBI

RefSeq Acc Id:

XM_040282510 ⟹ XP_040138444

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,762,675 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XM_040282511 ⟹ XP_040138445

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,004 (+)	NCBI

RefSeq Acc Id:

XM_040282512 ⟹ XP_040138446

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,004 (+)	NCBI

RefSeq Acc Id:

XM_040282513 ⟹ XP_040138447

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,000 (+)	NCBI

RefSeq Acc Id:

XM_040282514 ⟹ XP_040138448

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,772,357 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XM_040282515 ⟹ XP_040138449

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,838,420 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XM_040282516 ⟹ XP_040138450

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,839,704 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XM_040282517 ⟹ XP_040138451

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,838,421 - 39,865,169 (+)	NCBI

RefSeq Acc Id:

XR_005732736

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404946	39,759,618 - 39,865,000 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013211221	(Get FASTA)	NCBI Sequence Viewer
	XP_013211223	(Get FASTA)	NCBI Sequence Viewer
	XP_013211224	(Get FASTA)	NCBI Sequence Viewer
	XP_013211226	(Get FASTA)	NCBI Sequence Viewer
	XP_040138436	(Get FASTA)	NCBI Sequence Viewer
	XP_040138437	(Get FASTA)	NCBI Sequence Viewer
	XP_040138438	(Get FASTA)	NCBI Sequence Viewer
	XP_040138439	(Get FASTA)	NCBI Sequence Viewer
	XP_040138440	(Get FASTA)	NCBI Sequence Viewer
	XP_040138441	(Get FASTA)	NCBI Sequence Viewer
	XP_040138442	(Get FASTA)	NCBI Sequence Viewer
	XP_040138443	(Get FASTA)	NCBI Sequence Viewer
	XP_040138444	(Get FASTA)	NCBI Sequence Viewer
	XP_040138445	(Get FASTA)	NCBI Sequence Viewer
	XP_040138446	(Get FASTA)	NCBI Sequence Viewer
	XP_040138447	(Get FASTA)	NCBI Sequence Viewer
	XP_040138448	(Get FASTA)	NCBI Sequence Viewer
	XP_040138449	(Get FASTA)	NCBI Sequence Viewer
	XP_040138450	(Get FASTA)	NCBI Sequence Viewer
	XP_040138451	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000000215.3
	ENSSTOP00000015211.2
	ENSSTOP00000031957.1

RefSeq Acc Id:	XP_013211223 ⟸ XM_013355769
- Peptide Label:	isoform X13
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVR LLIHQGPSHTRVNEQNNDNETALHCAAQYGHTEVVKVLLEELTDPTMRNNKFETPLDLAALYGR LEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHRAVVQVLLDAGMDSNYQTEMGSALHEAALFG KTDVVQILLAAGIDVNIKDNHGLTALDTVRELPSQKSQQIAALIEDHMTGKRSTKDIEKISTPQ PALLSIADSVAPKSQGDVEKAVTELIIDFDPNTEEEGPYEALYNAVSCHSLDSMASGRSSDRDS VNKETEAGGARTAGVRPRERPPPPAKPPPDEEEEDRIDKKYFPLTASEVLATRPRIQGSAAQEE DEHPYELLLTAETKKLVSVDGKAKDHRRSSSSRSQDSAEGQDGQVPEQFSGLLHGSSPVCEVGQ DPFQLLSTTGQSHPDGSPQQGACHEASMQLEESGVHTPEASQPCGLDQSKRTGYPAGLPPTSSL SHPETWTRTASPHPGGAEEEGDRSGARSRAPPTSKPKAELKLSRSLSKSDSDLLTCSPTEDATM GSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQEQQKISGSRTLEQSVGEWL ESVGLQQYESKLLLNGFDDVRFLGSNVMEEQDLREIGISDPQHRRKLLQAARSLPKVKALGYDG NSPPSVPSWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVNVLKVHLLGHRKRIIASLAERP YEEPPQKPPRFSQLRCQDLISQTSSPLSQNDSCTGRSADLLLPSGDTGRRRHDSLQDPAAPSRA ERFRIQEEHREAKLTLRPPSLAAPYAPVQSWQHQPEKLIFESCGYEANYLGSMLIKDLRGTEST QDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYI TKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQAQKSRSLGASAVEMIETKSSKP VPKPRVGTRKSALEPPDTDQEAQSHASVSWIVDPKPDSKRSLSTKYETTIF hide sequence

RefSeq Acc Id:	XP_013211226 ⟸ XM_013355772
- Peptide Label:	isoform X8
- UniProtKB:	A0A287DEI2 (UniProtKB/TrEMBL), I3MSW6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVR LLIHQGPSHTRVNEQNNDNETALHCAAQYGHTEVVKVLLEELTDPTMRNNKFETPLDLAALYGR LEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHRAVVQVLLDAGMDSNYQTEMGSALHEAALFG KTDVVQILLAAGIDVNIKDNHGLTALDTVRELPSQKSQQIAALIEDHMTGKRSTKDIEKISTPQ PALLSIADSVAPKSQGDVEKAVTELIIDFDPNTEEEGPYEALYNAVSCHSLDSMASGRSSDRDS VNKETEAGGARTAGVRPRERPPPPAKPPPDEEEEDRIDKKYFPLTASEVLATRPRIQGSAAQEE DEHPYELLLTAETKKLVSVDGKAKDHRRSSSSRSQDSAEGQDGQVPEQFSGLLHGSSPVCEVGQ DPFQLLSTTGQSHPDGSPQQGACHEASMQLEESGVHTPEASQPCGLDQSKRTGYPAGLPPTSSL SHPETWTRTASPHPGGAEEEGDRSGARSRAPPTSKPKAELKLSRSLSKSDSDLLTCSPTEDATM GSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQEQQKISGSRTLEQSVGEWL ESVGLQQYESKLLLNGFDDVRFLGSNVMEEQDLREIGISDPQHRRKLLQAARSLPKVKALGYDG NSPPSVPSWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVNVLKVHLLGHRKRIIASLAERP YEEPPQKPPRFSQLRCQDLISQTSSPLSQNDSCTGRSADLLLPSGDTGRRRHDSLQDPAAPSRA ERFRIQEEHREAKLTLRPPSLAAPYAPVQSWQHQPEKLIFESCGYEANYLGSMLIKDLRGTEST QDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEHEIRNISCAAQDPEDLCTFAYI TKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQAQKSRSLGASAVEMIETKSSKP VPKPRVGTRKSAVPLTPDSRCCHCHSCTTHRPSYLPLPSVSPGVKLEPPDTDQEAQSHASVSWI VDPKPDSKRSLSTKYETTIF hide sequence

RefSeq Acc Id:	XP_013211221 ⟸ XM_013355767
- Peptide Label:	isoform X10
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVR LLIHQGPSHTRVNEQNALEIKELKKYGPFDPYINAKNNDNETALHCAAQYGHTEVVKVLLEELT DPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHRAVVQVLLDA GMDSNYQTEMGSALHEAALFGKTDVVQILLAAGIDVNIKDNHGLTALDTVRELPSQKSQQIAAL IEDHMTGKRSTKDIEKISTPQPALLSIADSVAPKSQGDVEKAVTELIIDFDPNTEEEGPYEALY NAVSCHSLDSMASGRSSDRDSVNKETEAGGARTAGVRPRERPPPPAKPPPDEEEEDRIDKKYFP LTASEVLATRPRIQGSAAQEEDEHPYELLLTAETKKLVSVDGKAKDHRRSSSSRSQDSAEGQDG QVPEQFSGLLHGSSPVCEVGQDPFQLLSTTGQSHPDGSPQQGACHEASMQLEESGVHTPEASQP CGLDQSKRTGYPAGLPPTSSLSHPETWTRTASPHPGGAEEEGDRSGARSRAPPTSKPKAELKLS RSLSKSDSDLLTCSPTEDATMGSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDF SQEQQKISGSRTLEQSVGEWLESVGLQQYESKLLLNGFDDVRFLGSNVMEEQDLREIGISDPQH RRKLLQAARSLPKVKALGYDGNSPPSVPSWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVN VLKVHLLGHRKRIIASLAERPYEEPPQKPPRFSQLRCQDLISQTSSPLSQNDSCTGRSADLLLP SGDTGRRRHDSLQDPAAPSRAERFRIQEEHREAKLTLRPPSLAAPYAPVQSWQHQPEKLIFESC GYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEH EIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQA QKSRSLGASAVEMIETKSSKPVPKPRVGTRKSALEPPDTDQEAQSHASVSWIVDPKPDSKRSLS TKYETTIF hide sequence

RefSeq Acc Id:	XP_013211224 ⟸ XM_013355770
- Peptide Label:	isoform X6
- UniProtKB:	I3LW81 (UniProtKB/TrEMBL), I3MSW6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MWRGPNVNCVDSTGYTPLHHAALNGHKDVVEVLLRNDALTNVADSKGCYPLHLAAWKGDAQIVR LLIHQGPSHTRVNEQNALEIKELKKYGPFDPYINAKNNDNETALHCAAQYGHTEVVKVLLEELT DPTMRNNKFETPLDLAALYGRLEVVKMLLNAHPNLLSCNTKKHTPLHLAARNGHRAVVQVLLDA GMDSNYQTEMGSALHEAALFGKTDVVQILLAAGIDVNIKDNHGLTALDTVRELPSQKSQQIAAL IEDHMTGKRSTKDIEKISTPQPALLSIADSVAPKSQGDVEKAVTELIIDFDPNTEEEGPYEALY NAVSCHSLDSMASGRSSDRDSVNKETEAGGARTAGVRPRERPPPPAKPPPDEEEEDRIDKKYFP LTASEVLATRPRIQGSAAQEEDEHPYELLLTAETKKLVSVDGKAKDHRRSSSSRSQDSAEGQDG QVPEQFSGLLHGSSPVCEVGQDPFQLLSTTGQSHPDGSPQQGACHEASMQLEESGVHTPEASQP CGLDQSKRTGYPAGLPPTSSLSHPETWTRTASPHPGGAEEEGDRSGARSRAPPTSKPKAELKLS RSLSKSDSDLLTCSPTEDATMGSRSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDF SQEQQKISGSRTLEQSVGEWLESVGLQQYESKLLLNGFDDVRFLGSNVMEEQDLREIGISDPQH RRKLLQAARSLPKVKALGYDGNSPPSVPSWLDSLGLQDYVHSFLSSGYSSIDTVKNLWELELVN VLKVHLLGHRKRIIASLAERPYEEPPQKPPRFSQLRCQDLISQTSSPLSQNDSCTGRSADLLLP SGDTGRRRHDSLQDPAAPSRAERFRIQEEHREAKLTLRPPSLAAPYAPVQSWQHQPEKLIFESC GYEANYLGSMLIKDLRGTESTQDACAKMRKSTEHMKKIPTIILSITYKGVKFIDASNKNVIAEH EIRNISCAAQDPEDLCTFAYITKDLQTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQA QKSRSLGASAVEMIETKSSKPVPKPRVGTRKSAVPLTPDSRCCHCHSCTTHRPSYLPLPSVSPG VKLEPPDTDQEAQSHASVSWIVDPKPDSKRSLSTKYETTIF hide sequence

RefSeq Acc Id:	XP_040138436 ⟸ XM_040282502
- Peptide Label:	isoform X1
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138437 ⟸ XM_040282503
- Peptide Label:	isoform X2
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138439 ⟸ XM_040282505
- Peptide Label:	isoform X4
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138438 ⟸ XM_040282504
- Peptide Label:	isoform X3
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138445 ⟸ XM_040282511
- Peptide Label:	isoform X14
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138440 ⟸ XM_040282506
- Peptide Label:	isoform X5
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138442 ⟸ XM_040282508
- Peptide Label:	isoform X9
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138446 ⟸ XM_040282512
- Peptide Label:	isoform X15
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138441 ⟸ XM_040282507
- Peptide Label:	isoform X7
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138443 ⟸ XM_040282509
- Peptide Label:	isoform X11
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138447 ⟸ XM_040282513
- Peptide Label:	isoform X16
- UniProtKB:	I3MSW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040138444 ⟸ XM_040282510
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_040138448 ⟸ XM_040282514
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_040138449 ⟸ XM_040282515
- Peptide Label:	isoform X18

RefSeq Acc Id:	XP_040138451 ⟸ XM_040282517
- Peptide Label:	isoform X19

RefSeq Acc Id:	XP_040138450 ⟸ XM_040282516
- Peptide Label:	isoform X19

Ensembl Acc Id:

ENSSTOP00000031957 ⟸ ENSSTOT00000039197

Ensembl Acc Id:

ENSSTOP00000000215 ⟸ ENSSTOT00000000243

Ensembl Acc Id:

ENSSTOP00000015211 ⟸ ENSSTOT00000025839

Protein Domains

PID SAM

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000000241	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000000243.3	UniProtKB/TrEMBL
	ENSSTOT00000025839.2	UniProtKB/TrEMBL
	ENSSTOT00000039197.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.50	UniProtKB/TrEMBL
	1.25.40.20	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	ANKS1/Caskin	UniProtKB/TrEMBL
	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PTB/PI_dom	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
	SAM/pointed_sf	UniProtKB/TrEMBL
	SAM_ANKS1_repeat1	UniProtKB/TrEMBL
	SAM_ANKS1_repeat2	UniProtKB/TrEMBL
NCBI Gene	Anks1a	ENTREZGENE
PANTHER	ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	PTHR24174:SF4	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	PID	UniProtKB/TrEMBL
	SAM_1	UniProtKB/TrEMBL
PRINTS	ANKYRIN	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
	PID	UniProtKB/TrEMBL
	SAM_DOMAIN	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
	PTB	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
Superfamily-SCOP	PH domain-like	UniProtKB/TrEMBL
	SSF47769	UniProtKB/TrEMBL
	SSF48403	UniProtKB/TrEMBL
UniProt	A0A287DEI2	ENTREZGENE, UniProtKB/TrEMBL
	I3LW81	ENTREZGENE, UniProtKB/TrEMBL
	I3MSW6	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD