Wdr91 (WD repeat domain 91) - Rat Genome Database

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Gene: Wdr91 (WD repeat domain 91) Ictidomys tridecemlineatus
Analyze
Symbol: Wdr91
Name: WD repeat domain 91
RGD ID: 12703322
Description: ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (inferred); phosphatidylinositol 3-kinase regulator activity (inferred); INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH pleomorphic xanthoastrocytoma (ortholog); FOUND IN cytosol (inferred); early endosome membrane (inferred); endosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: WD repeat-containing protein 91
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511820,601,556 - 20,631,139 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936579734,109 - 766,748 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936579734,151 - 763,672 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr91Squirrelpleomorphic xanthoastrocytoma  ISOWDR91 (Homo sapiens)8554872ClinVar Annotator: match by term: Pleomorphic xanthoastrocytomaClinVarPMID:28299358


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr91Squirrelearly endosome to late endosome transport involved_inIEAPANTHER:PTN000317701150520179 TreeGrafterGO_REF:0000118
Wdr91Squirrelearly endosome to late endosome transport involved_inIEAInterPro:IPR039724150520179 InterProGO_REF:0000002
Wdr91Squirrelearly endosome to late endosome transport involved_inIEAUniProtKB:A4D1P6 and ensembl:ENSP00000346466150520179 EnsemblGO_REF:0000107
Wdr91Squirrelnegative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inIEAInterPro:IPR039724150520179 InterProGO_REF:0000002
Wdr91Squirrelregulation of protein catabolic process involved_inIEAUniProtKB:A4D1P6 and ensembl:ENSP00000346466150520179 EnsemblGO_REF:0000107
Wdr91Squirrelubiquitin-dependent protein catabolic process NOT|involved_inISOWDR91 (Homo sapiens)9068941 PMID:28404643UniProtPMID:28404643

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Wdr91Squirrelcytosol located_inIEAUniProtKB:A4D1P6 and ensembl:ENSP00000346466150520179 EnsemblGO_REF:0000107
Wdr91Squirrelearly endosome membrane located_inIEAPANTHER:PTN000317701150520179 TreeGrafterGO_REF:0000118
Wdr91Squirrelearly endosome membrane located_inIEAUniProtKB:A4D1P6 and ensembl:ENSP00000346466150520179 EnsemblGO_REF:0000107
Wdr91Squirrelearly endosome membrane located_inIEAUniProtKB-SubCell:SL-0093150520179 UniProtGO_REF:0000044
Wdr91Squirrelendosome located_inIEAUniProtKB-KW:KW-0967150520179 UniProtGO_REF:0000043
Wdr91Squirrelendosome membrane located_inIEAUniProtKB:A4D1P6 and ensembl:ENSP00000346466150520179 EnsemblGO_REF:0000107
Wdr91Squirrellate endosome membrane located_inIEAPANTHER:PTN000317701150520179 TreeGrafterGO_REF:0000118
Wdr91Squirrellate endosome membrane located_inIEAUniProtKB-SubCell:SL-0151150520179 UniProtGO_REF:0000044
Wdr91Squirrellate endosome membrane located_inIEAUniProtKB:A4D1P6 and ensembl:ENSP00000346466150520179 EnsemblGO_REF:0000107
1 to 9 of 9 rows

Molecular Function

  

PMID:22301074   PMID:30032202  



Wdr91
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511820,601,556 - 20,631,139 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936579734,109 - 766,748 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936579734,151 - 763,672 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WDR91
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387135,183,839 - 135,211,526 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7135,183,839 - 135,211,555 (-)EnsemblGRCh38hg38GRCh38
GRCh377134,868,591 - 134,896,278 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367134,520,525 - 134,546,811 (-)NCBINCBI36Build 36hg18NCBI36
Celera7129,606,070 - 129,633,795 (-)NCBICelera
Cytogenetic Map7q33NCBI
HuRef7129,171,252 - 129,198,944 (-)NCBIHuRef
CHM1_17134,802,527 - 134,830,249 (-)NCBICHM1_1
T2T-CHM13v2.07136,491,701 - 136,519,383 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27134,212,952 - 134,240,677 (-)NCBI
Wdr91
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39634,857,361 - 34,887,766 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl634,857,361 - 34,887,811 (-)EnsemblGRCm39 Ensembl
GRCm38634,880,426 - 34,910,831 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl634,880,426 - 34,910,876 (-)EnsemblGRCm38mm10GRCm38
MGSCv37634,830,426 - 34,860,831 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36634,810,578 - 34,840,983 (-)NCBIMGSCv36mm8
Celera634,880,559 - 34,910,996 (-)NCBICelera
Cytogenetic Map6B1NCBI
cM Map615.19NCBI
Wdr91
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8464,521,504 - 64,558,873 (-)NCBIGRCr8
mRatBN7.2463,554,364 - 63,591,733 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl463,554,364 - 63,591,733 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx468,512,415 - 68,549,772 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0464,428,148 - 64,465,504 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0462,830,541 - 62,867,899 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0462,398,073 - 62,438,958 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl462,398,797 - 62,438,958 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0462,130,769 - 62,166,447 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4462,266,685 - 62,304,007 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1462,543,137 - 62,580,127 (-)NCBI
Celera458,605,800 - 58,642,741 (-)NCBICelera
Cytogenetic Map4q22NCBI
Wdr91
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554947,441,918 - 7,468,615 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554947,441,880 - 7,470,174 (+)NCBIChiLan1.0ChiLan1.0
WDR91
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26171,986,626 - 172,032,427 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1724,016,868 - 24,042,680 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07127,150,041 - 127,176,376 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17139,652,473 - 139,680,199 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7139,653,864 - 139,680,199 (-)Ensemblpanpan1.1panPan2
WDR91
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11612,964,967 - 12,991,851 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1612,965,140 - 12,995,345 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1613,976,583 - 14,004,081 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01612,945,013 - 12,972,530 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1612,945,045 - 12,974,027 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11613,387,029 - 13,414,532 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01612,486,349 - 12,513,824 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01612,625,387 - 12,652,919 (+)NCBIUU_Cfam_GSD_1.0
WDR91
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1814,092,322 - 14,126,475 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11814,092,265 - 14,124,127 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21814,899,268 - 14,931,415 (+)NCBISscrofa10.2Sscrofa10.2susScr3
WDR91
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121103,854,521 - 103,885,041 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl21103,853,944 - 103,884,999 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666072770,009 - 800,067 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wdr91
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476515,499,106 - 15,526,756 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476515,497,271 - 15,526,885 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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RefSeq Transcripts XM_005331075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000003887   ⟹   ENSSTOP00000003485
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_004936579734,109 - 766,748 (+)Ensembl
RefSeq Acc Id: XM_005331075   ⟹   XP_005331132
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440511820,601,556 - 20,631,139 (+)NCBI
SpeTri2.0NW_004936579734,151 - 763,672 (+)NCBI
Sequence:
Protein RefSeqs XP_005331132 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000003485.3
GenBank Protein KAG3277427 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005331132   ⟸   XM_005331075
- UniProtKB: I3M374 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSTOP00000003485   ⟸   ENSSTOT00000003887


1 to 17 of 17 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSTOG00000003883 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000003887.3 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
InterPro Apc4-like_WD40_dom UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
  WDR91 UniProtKB/TrEMBL
NCBI Gene Wdr91 ENTREZGENE
PANTHER PTHR13083 UniProtKB/TrEMBL
  WD REPEAT-CONTAINING PROTEIN 91 UniProtKB/TrEMBL
Pfam ANAPC4_WD40 UniProtKB/TrEMBL
  WD40 UniProtKB/TrEMBL
PROSITE WD_REPEATS_2 UniProtKB/TrEMBL
SMART WD40 UniProtKB/TrEMBL
Superfamily-SCOP SSF50978 UniProtKB/TrEMBL
UniProt I3M374 ENTREZGENE, UniProtKB/TrEMBL
1 to 17 of 17 rows