Abhd17b (abhydrolase domain containing 17B, depalmitoylase)

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Gene: Abhd17b (abhydrolase domain containing 17B, depalmitoylase) Ictidomys tridecemlineatus

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Symbol:

Abhd17b

Name:

abhydrolase domain containing 17B, depalmitoylase

RGD ID:

12702091

Description:

ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (inferred); INVOLVED IN protein depalmitoylation (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog); postsynaptic recycling endosome membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

abhydrolase domain containing 17B; abhydrolase domain containing 17B, transcript variant X1; abhydrolase domain containing 17B, transcript variant X2; alpha/beta hydrolase domain-containing protein 17B

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	133,229,709 - 133,270,888 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936503	7,901,522 - 7,943,300 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936503	7,902,116 - 7,943,300 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

macromolecule depalmitoylation (IEA)

negative regulation of protein localization to microtubule (IEA)

positive regulation of protein localization to endosome (IEA)

protein depalmitoylation (ISO)

regulation of dendritic spine maintenance (IEA)

regulation of postsynapse organization (IEA)

regulation of protein localization to synapse (IEA)

Cellular Component

cell projection (IEA)

dendritic spine (IEA)

endosome (IEA)

endosome membrane (IEA)

glutamatergic synapse (ISO)

plasma membrane (IEA)

postsynaptic density (IEA)

postsynaptic density membrane (IEA,ISO)

postsynaptic membrane (IEA)

postsynaptic recycling endosome membrane (ISO)

recycling endosome membrane (IEA)

synapse (IEA)

Molecular Function

palmitoyl-(protein) hydrolase activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Abhd17b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	133,229,709 - 133,270,888 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936503	7,901,522 - 7,943,300 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936503	7,902,116 - 7,943,300 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ABHD17B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	71,862,452 - 71,911,193 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	71,862,452 - 71,911,193 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	74,477,368 - 74,526,109 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	73,667,188 - 73,715,968 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	71,706,921 - 71,755,401	NCBI
Celera	9	45,050,096 - 45,098,877 (-)	NCBI		Celera
Cytogenetic Map	9	q21.13	NCBI
HuRef	9	44,300,326 - 44,349,103 (-)	NCBI		HuRef
CHM1_1	9	74,623,937 - 74,672,713 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	84,012,803 - 84,061,543 (-)	NCBI		T2T-CHM13v2.0

Abhd17b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	21,630,483 - 21,663,002 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	21,630,549 - 21,663,001 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	21,653,267 - 21,685,638 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	21,653,185 - 21,685,637 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	21,727,799 - 21,760,127 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	21,720,406 - 21,752,734 (+)	NCBI		MGSCv36	mm8
Celera	19	22,389,536 - 22,422,132 (+)	NCBI		Celera
Cytogenetic Map	19	B	NCBI
cM Map	19	15.54	NCBI

Abhd17b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	228,624,821 - 228,659,254 (+)	NCBI		GRCr8
mRatBN7.2	1	219,198,294 - 219,232,733 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	219,198,471 - 219,231,933 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	227,652,892 - 227,686,312 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	234,583,011 - 234,616,431 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	227,401,034 - 227,434,458 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	239,266,140 - 239,301,133 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	239,266,921 - 239,301,176 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	246,553,836 - 246,588,442 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	224,888,152 - 224,921,533 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	225,052,174 - 225,085,544 (+)	NCBI
Celera	1	216,435,970 - 216,469,337 (+)	NCBI		Celera
Cytogenetic Map	1	q51	NCBI

Abhd17b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955434	1,262,264 - 1,302,496 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955434	1,262,956 - 1,302,877 (+)	NCBI	ChiLan1.0	ChiLan1.0

ABHD17B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	71,055,414 - 71,101,024 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	71,061,353 - 71,107,512 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	52,900,834 - 52,946,917 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	70,609,077 - 70,654,637 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	70,606,487 - 70,654,637 (-)	Ensembl	panpan1.1		panPan2

ABHD17B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	85,806,873 - 85,861,051 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	85,807,511 - 85,863,551 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	86,271,917 - 86,326,062 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	86,257,345 - 86,311,553 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	86,302,240 - 86,343,493 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	86,018,650 - 86,073,041 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	85,723,163 - 85,777,345 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	86,482,389 - 86,536,573 (+)	NCBI		UU_Cfam_GSD_1.0

ABHD17B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	225,150,682 - 225,193,287 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	225,149,922 - 225,193,329 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	251,717,264 - 251,759,183 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ABHD17B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	82,937,311 - 82,985,263 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	82,937,238 - 82,985,283 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	71,357,454 - 71,405,343 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Abhd17b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	1,201,988 - 1,214,971 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624736	1,175,103 - 1,218,251 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005324102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021725626	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000004662 ⟹ ENSSTOP00000004184

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936503	7,901,522 - 7,933,649 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000032963 ⟹ ENSSTOP00000026476

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936503	7,901,522 - 7,943,300 (-)	Ensembl

RefSeq Acc Id:

XM_005324102 ⟹ XP_005324159

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	133,229,709 - 133,270,888 (+)	NCBI
SpeTri2.0	NW_004936503	7,902,116 - 7,943,300 (-)	NCBI

Sequence:

show sequence

CCCCACACCCGATCGCAGCCTGGAGCCCGGGTCAGCTTGGCACCTTCCTCCAGTCAGTGACCAA
CTCTTGGTGTGGAAAGGGCTCGGCTACCCCCCTCCGTTCCTATCCAGTGTCTTTCCCGCTACTA
GAGCAAGCCCAGCGCCTGGCGGGCTGAGTAGGAGAAAGAAAGGAGAATTGAAGAGAAGAAAGAC
CTGGCTGGGACTGGGTGTTGTCTACAGTGCCAGAAAAGGAGGCGGTGGCAGCGTTTGCGACCAC
GGCCGCTCGGGACGTGAGGCCCGAGAGCAGCCGGCGCCGGCGGCCGCCGCTCCAGCTCTTCGAG
CCGGGGCCGTTAGTCAGCAGAACGCGAGCTTGTGTGGAGAAGAGCCGGCGCGAGGAGAGACTCG
GGGCTCCCTCAGACCCCGCGGTCCTTCGTCCCGGCTCCGGGGACTGCAGCCCTCGTGCCCCCTC
CTCGCCTGGGCCCGTCCGCGGACTGGGAGAGTCCGGTGGCCGGAGCGCGGGTCGCGCCTCGTGG
AGGACAACGCGTCGCAGACGTTCTCTCCCGACCCCCTCTGCTCGGCATCTCGGCCGTGGCCGCC
TCTGTGCAGAAGATGAATAATCTTTCGTTTAGTGAGCTGTGTTGCCTCTTCTGCTGTCCTCCTT
GCCCAGGGAAAATTGCTTCTAAACTAGCATTTTTGCCACCTGATCCAACTTACACACTGATGTG
TGATGAAAGTGGAAGCCGCTGGACTTTACACCTCTCAGAACGAGCAGACTGGCAGTATTCTTCT
AGAGAAAAAGATGCTATCGAATGTTTCATGACTGGAACCAGTAAAGGCAACCGAATTGCCTGTA
TGTTTGTGCGTTGCTCACCCAATGCCAAATATACTTTACTCTTTTCACATGGAAATGCTGTTGA
TCTTGGTCAGATGAGCAGCTTTTACATAGGACTGGGATCACGGATTAATTGTAATATATTCTCA
TATGATTATTCTGGATATGGTGCAAGTTCTGGGAAGCCAACAGAGAAGAACCTCTATGCAGATA
TTGAAGCTGCCTGGCTTAGTCTTAGGACAAGATATGGCATTCGTCCTGAAAATGTGATCATATA
TGGCCAAAGTATAGGTACAGTACCATCTGTGGATCTTGCTGCTCGGTATGAGAGTGCTGCTGTT
ATTCTTCATTCTCCTTTGACCTCCGGAATGAGAGTTGCTTTTCCTGATACAAAGAAGACCTACT
GTTTTGATGCATTCCCAAACATTGACAAAATCTCTAAGATAACCTCTCCAGTATTAATAATTCA
TGGGACTGAAGATGAAGTTATTGACTTTTCACATGGCCTCGCATTATTTGAGCGTTGCCAAAGA
CCTGTGGAGCCTCTGTGGGTTGAAGGAGCAGGACATAATGATGTGGAACTTTATGGACAGTACC
TTGAAAGGTTGAAACAGTTTGTGTCACAGGAACTGGTAAATTTGTAAAATATTCTGTAAATTTG
CATACTGGGTTTTCTTTTCTTGCTGAACTGCACTCTTTGGTAAATAATATAAAACCTGAAGGTT
TTGTTTACAAATCATGTCAGTTGCCTTCAAAAATGTACAGGTAATGATTTGTTAACAGACTTAA
TGAAGGTTTTAATTACCAGAAATAGAAACTGGAAATAACAGTATCATGCAGTCAGGCTGTGTAA
TTTATATTTTTTCTGTGAATTTTTTTTAAACATCAAGATGAGTACTGTATGAAATTTTAATTAG
TTCTGTAAAATCAAATGCTGTAAAAGTATTGCCAGATGCTTTTGCATATCAGAAACAAATTTAT
AAATATTTTTAAAACATCTCAATGTACTAAATCTTATCCTGATATACAAATGATGTAATATTCT
TTAAAAAAGCTGTATATCTAAAGCAATTCAAGTACTCATAATAGAATAAACTGTAAAAATAAAA
TTTTAAAACATCAAGTTAAATAGGGTTCATCTAACCCTGTTGTACAGGGATAGGAGCTTAAATG
GCTATTTTATTGTAAAATACATTGAATTTTCTGTATTCTCGTTATAATACATTTATCCTAAAAA
ATGAAGTAAGTCTTAATTTTTATGCCATCTGTTAATTTACCAATTAGTTACCTTGTAAATGCAG
TCATAGTGGCACTGAATTTTAACTAGTTTGGATTTATAAGTTTGATACTGTGAGGCAACTACTT
AAAATTTTATTTAGTTACCTAAAAGGCATTTAGGGTTTCAAGACTGATTTGTAATGCAACGTTG
TTTTCAAATTTTGACTAATCTTGTAGAATTGTATGAAAACCTGAAAGTCCATTAGTTGTTCTTC
AATACCACAAACAGACTGGCTATTTGGACTTTTTTCACTTTGGCTATTTTTAAGAATAGGACCC
ACTCATTTGGGTTACTATCTAAGAATTTCATGGATTTACTCCTGTATGCAGGAGGTAATAAAAC
ATTTAATTCATAAGTTTTATATTAACCAGTATAGTAAAAAATAAAGCTCACACACAAAAACTAA
GTTGCCTTTCCTTGAATGAATCCTGCCTGAATAAAACAATGAAAGAAAAATAAAAATAAAATTA
ACGGTATGTAGTCTAATTTGTAAATGAATGAATATTGAAATAATACACACTGTGGATATCTTTT
AAGGCCTTATGTAGTTTTAATGTTCTGCTTGTTCTGTGGTTATGTCTAAGACTATAGTATATGA
TTCTCTACAACGTATATCAAGTATTGTGAATGCTTTGGTTCAGATGTGTCAAATTAACAGTAAA
ACAACAAATATACCAGTCA

hide sequence

RefSeq Acc Id:

XM_021725626 ⟹ XP_021581301

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	133,230,197 - 133,270,888 (+)	NCBI
SpeTri2.0	NW_004936503	7,902,116 - 7,933,636 (-)	NCBI

Sequence:

show sequence

GATTCTACTCATTGCCAAACTGAAGATGAATAATCTTTCGTTTAGTGAGCTGTGTTGCCTCTTC
TGCTGTCCTCCTTGCCCAGGGAAAATTGCTTCTAAACTAGCATTTTTGCCACCTGATCCAACTT
ACACACTGATGTGTGATGAAAGTGGAAGCCGCTGGACTTTACACCTCTCAGAACGAGCAGACTG
GCAGTATTCTTCTAGAGAAAAAGATGCTATCGAATGTTTCATGACTGGAACCAGTAAAGGCAAC
CGAATTGCCTGTATGTTTGTGCGTTGCTCACCCAATGCCAAATATACTTTACTCTTTTCACATG
GAAATGCTGTTGATCTTGGTCAGATGAGCAGCTTTTACATAGGACTGGGATCACGGATTAATTG
TAATATATTCTCATATGATTATTCTGGATATGGTGCAAGTTCTGGGAAGCCAACAGAGAAGAAC
CTCTATGCAGATATTGAAGCTGCCTGGCTTAGTCTTAGGACAAGATATGGCATTCGTCCTGAAA
ATGTGATCATATATGGCCAAAGTATAGGTACAGTACCATCTGTGGATCTTGCTGCTCGGTATGA
GAGTGCTGCTGTTATTCTTCATTCTCCTTTGACCTCCGGAATGAGAGTTGCTTTTCCTGATACA
AAGAAGACCTACTGTTTTGATGCATTCCCAAACATTGACAAAATCTCTAAGATAACCTCTCCAG
TATTAATAATTCATGGGACTGAAGATGAAGTTATTGACTTTTCACATGGCCTCGCATTATTTGA
GCGTTGCCAAAGACCTGTGGAGCCTCTGTGGGTTGAAGGAGCAGGACATAATGATGTGGAACTT
TATGGACAGTACCTTGAAAGGTTGAAACAGTTTGTGTCACAGGAACTGGTAAATTTGTAAAATA
TTCTGTAAATTTGCATACTGGGTTTTCTTTTCTTGCTGAACTGCACTCTTTGGTAAATAATATA
AAACCTGAAGGTTTTGTTTACAAATCATGTCAGTTGCCTTCAAAAATGTACAGGTAATGATTTG
TTAACAGACTTAATGAAGGTTTTAATTACCAGAAATAGAAACTGGAAATAACAGTATCATGCAG
TCAGGCTGTGTAATTTATATTTTTTCTGTGAATTTTTTTTAAACATCAAGATGAGTACTGTATG
AAATTTTAATTAGTTCTGTAAAATCAAATGCTGTAAAAGTATTGCCAGATGCTTTTGCATATCA
GAAACAAATTTATAAATATTTTTAAAACATCTCAATGTACTAAATCTTATCCTGATATACAAAT
GATGTAATATTCTTTAAAAAAGCTGTATATCTAAAGCAATTCAAGTACTCATAATAGAATAAAC
TGTAAAAATAAAATTTTAAAACATCAAGTTAAATAGGGTTCATCTAACCCTGTTGTACAGGGAT
AGGAGCTTAAATGGCTATTTTATTGTAAAATACATTGAATTTTCTGTATTCTCGTTATAATACA
TTTATCCTAAAAAATGAAGTAAGTCTTAATTTTTATGCCATCTGTTAATTTACCAATTAGTTAC
CTTGTAAATGCAGTCATAGTGGCACTGAATTTTAACTAGTTTGGATTTATAAGTTTGATACTGT
GAGGCAACTACTTAAAATTTTATTTAGTTACCTAAAAGGCATTTAGGGTTTCAAGACTGATTTG
TAATGCAACGTTGTTTTCAAATTTTGACTAATCTTGTAGAATTGTATGAAAACCTGAAAGTCCA
TTAGTTGTTCTTCAATACCACAAACAGACTGGCTATTTGGACTTTTTTCACTTTGGCTATTTTT
AAGAATAGGACCCACTCATTTGGGTTACTATCTAAGAATTTCATGGATTTACTCCTGTATGCAG
GAGGTAATAAAACATTTAATTCATAAGTTTTATATTAACCAGTATAGTAAAAAATAAAGCTCAC
ACACAAAAACTAAGTTGCCTTTCCTTGAATGAATCCTGCCTGAATAAAACAATGAAAGAAAAAT
AAAAATAAAATTAACGGTATGTAGTCTAATTTGTAAATGAATGAATATTGAAATAATACACACT
GTGGATATCTTTTAAGGCCTTATGTAGTTTTAATGTTCTGCTTGTTCTGTGGTTATGTCTAAGA
CTATAGTATATGATTCTCTACAACGTATATCAAGTATTGTGAATGCTTTGGTTCAGATGTGTCA
AATTAACAGTAAAACAACAAATATACCAGTCA

hide sequence

RefSeq Acc Id:

XM_040285671 ⟹ XP_040141605

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	133,230,425 - 133,270,888 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005324159	(Get FASTA)	NCBI Sequence Viewer
	XP_021581301	(Get FASTA)	NCBI Sequence Viewer
	XP_040141605	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000004184.3
	ENSSTOP00000026476.1
GenBank Protein	KAG3287111	(Get FASTA)	NCBI Sequence Viewer
	KAG3287112	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005324159 ⟸ XM_005324102

- UniProtKB:

I3M4N2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNNLSFSELCCLFCCPPCPGKIASKLAFLPPDPTYTLMCDESGSRWTLHLSERADWQYSSREKD
AIECFMTGTSKGNRIACMFVRCSPNAKYTLLFSHGNAVDLGQMSSFYIGLGSRINCNIFSYDYS
GYGASSGKPTEKNLYADIEAAWLSLRTRYGIRPENVIIYGQSIGTVPSVDLAARYESAAVILHS
PLTSGMRVAFPDTKKTYCFDAFPNIDKISKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEP
LWVEGAGHNDVELYGQYLERLKQFVSQELVNL

hide sequence

RefSeq Acc Id:

XP_021581301 ⟸ XM_021725626

- UniProtKB:

I3M4N2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNNLSFSELCCLFCCPPCPGKIASKLAFLPPDPTYTLMCDESGSRWTLHLSERADWQYSSREKD
AIECFMTGTSKGNRIACMFVRCSPNAKYTLLFSHGNAVDLGQMSSFYIGLGSRINCNIFSYDYS
GYGASSGKPTEKNLYADIEAAWLSLRTRYGIRPENVIIYGQSIGTVPSVDLAARYESAAVILHS
PLTSGMRVAFPDTKKTYCFDAFPNIDKISKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEP
LWVEGAGHNDVELYGQYLERLKQFVSQELVNL

hide sequence

RefSeq Acc Id:	XP_040141605 ⟸ XM_040285671
- UniProtKB:	I3M4N2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000026476 ⟸ ENSSTOT00000032963

Ensembl Acc Id:

ENSSTOP00000004184 ⟸ ENSSTOT00000004662

Protein Domains

Serine aminopeptidase S33

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000004677	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000004662.3	UniProtKB/TrEMBL
	ENSSTOT00000032963.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1820	UniProtKB/TrEMBL
InterPro	AB_hydrolase	UniProtKB/TrEMBL
	Hydrolase_4	UniProtKB/TrEMBL
NCBI Gene	Abhd17b	ENTREZGENE
PANTHER	ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 17B	UniProtKB/TrEMBL
Pfam	Hydrolase_4	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53474	UniProtKB/TrEMBL
UniProt	I3M4N2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-01-28	Abhd17b	abhydrolase domain containing 17B, depalmitoylase	Abhd17b	abhydrolase domain containing 17B	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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