Symbol:
Ptgr2
Name:
prostaglandin reductase 2
RGD ID:
12685037
Description:
ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN lipid metabolic process (inferred); prostaglandin metabolic process (inferred); ASSOCIATED WITH intellectual disability (ortholog); primary ciliary dyskinesia 16 (ortholog); FOUND IN cytoplasm (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024408640 28,903,412 - 28,945,624 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936488 3,123,304 - 3,166,863 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936488 3,123,405 - 3,165,556 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Ptgr2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024408640 28,903,412 - 28,945,624 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936488 3,123,304 - 3,166,863 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936488 3,123,405 - 3,165,556 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
PTGR2 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 14 73,851,831 - 73,885,726 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 14 73,851,831 - 73,885,726 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 14 74,318,534 - 74,352,429 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 14 73,388,424 - 73,421,915 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 14 73,388,426 - 73,421,915 NCBI Celera 14 54,355,472 - 54,389,115 (+) NCBI Celera Cytogenetic Map 14 q24.3 NCBI HuRef 14 54,485,578 - 54,519,224 (+) NCBI HuRef CHM1_1 14 74,258,185 - 74,291,756 (+) NCBI CHM1_1 T2T-CHM13v2.0 14 68,059,477 - 68,093,373 (+) NCBI T2T-CHM13v2.0
Ptgr2 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 12 84,332,011 - 84,362,606 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 12 84,332,006 - 84,362,606 (+) Ensembl GRCm39 Ensembl GRCm38 12 84,285,237 - 84,315,832 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 12 84,285,232 - 84,315,832 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 12 85,626,264 - 85,656,782 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 12 85,175,062 - 85,205,580 (+) NCBI MGSCv36 mm8 Celera 12 85,740,324 - 85,770,857 (+) NCBI Celera Cytogenetic Map 12 D1 NCBI cM Map 12 39.14 NCBI
Ptgr2 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 6 109,662,469 - 109,694,232 (+) NCBI GRCr8 mRatBN7.2 6 103,931,367 - 103,963,113 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 6 103,931,409 - 103,963,111 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 6 104,093,166 - 104,124,901 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 6 104,392,251 - 104,423,987 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 6 103,761,828 - 103,793,565 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 6 107,999,832 - 108,031,645 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 6 107,999,846 - 108,031,643 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 6 117,514,752 - 117,546,565 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 108,349,172 - 108,380,867 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 6 108,352,627 - 108,384,321 (+) NCBI Celera 6 101,759,837 - 101,791,510 (+) NCBI Celera Cytogenetic Map 6 q31 NCBI
Ptgr2 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955523 1,515,017 - 1,549,998 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955523 1,519,767 - 1,549,998 (-) NCBI ChiLan1.0 ChiLan1.0
PTGR2 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 15 74,941,609 - 74,981,970 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 14 74,158,124 - 74,191,783 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 14 54,410,939 - 54,444,595 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 14 73,266,484 - 73,299,378 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 14 73,266,502 - 73,299,378 (+) Ensembl panpan1.1 panPan2
PTGR2 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 8 47,095,405 - 47,120,371 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 8 46,768,242 - 46,805,297 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 8 47,313,084 - 47,350,058 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 8 47,312,781 - 47,350,047 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 8 46,980,670 - 47,017,709 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 8 46,998,391 - 47,035,732 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 8 47,389,163 - 47,426,127 (+) NCBI UU_Cfam_GSD_1.0
PTGR2 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 7 97,174,219 - 97,195,595 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 7 97,174,143 - 97,195,601 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 7 102,928,733 - 102,950,202 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
PTGR2 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 24 51,060,503 - 51,095,762 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 24 51,060,608 - 51,095,303 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666053 39,274,452 - 39,312,455 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Ptgr2 (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSSTOT00000008582 ⟹ ENSSTOP00000007692
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source SpeTri2.0 Ensembl NW_004936488 3,123,304 - 3,166,863 (+) Ensembl
RefSeq Acc Id:
XM_005321216 ⟹ XP_005321273
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024408640 28,903,412 - 28,945,615 (-) NCBI SpeTri2.0 NW_004936488 3,123,405 - 3,165,556 (+) NCBI
Sequence:
ATCTCGCGAGATCGCCCCCCCCCCCCCCGGAGCTCCGCGACGGAATTATACAGAAATCTTGTGAGACGACTGCACAAACAGAGTGATGATTGTACAGCAAGTGGTATTAAATTCCCGACCTGGAAAAA ATGGTAATCCAGTGGCAGAGAATTTCCGATTGGAAGAAGTCAGTATACCAGATACTATTAATGAAGGACAAGTACAAGTTAGAACTCTTTATCTTTCTGTGGATCCTTACATGCGTTGTAGGATGAAT GAAGACACTGGTACTGATTATATAGCACCTTGGCAGCTGTCTCAGGTGGTGGATGGTGGAGGTGTTGGAATTATAGAATTAAGCAAGCACGCAAATTTGACTAAAGGTGACTTTGTGACTTCTTTCTA TTGGCCCTGGCAAACCAAGGCTATTCTGGATGGAAATAGCCTTGAAAAGGTAGACCCACAGCTTGTAGATGGACACCTTTCATATTTTCTTGGAGCTATAGGTATGCCTGGCTTGACTTCCTTAATTG GAGTACAGGAAAAAGGTCATGTAACTGCTGGATCTAATCAGACAATGGTTGTCAGTGGAGCAGCAGGTGCCTGTGGATCCTTGGCTGGGCAGATTGGCCATTTGCTGGGCTGTTCCAGAGTGGTGGGA ATTTGTGGAACACAAGAGAAATGCCTCATTTTGACCTCAGAACTGGGCTTTGATGCTGCAATTAATTATAAAAAAGGGAATGTGGCAGAACAACTCCGAGAATCATGCCCAGCTGGAGTGGACGTTTA CTTTGATAATGTTGGTGGTGACATCAGCGATACAGTGATAAGTCAGATGAATCAGAACAGCCACATCATCCTGTGCGGTCAAATTTCTCAGTACAATAAAGATGTGCCATATCCTCCTCCACTGCCCC CTGCGATAGAGGCAATCCAGAAGGAAAGAAACATCACAAGGGAAAGATTTATGGTGTTAAATTATAAGGATAAATTTGAGCCTGGCATTCTACAACTGAGTCAGTGGTTTAAAGAAGGAAAGCTAAAG ATCAAGGAGACTATGATAAATGGATTGGAAAACATGGGAGCTGCATTCCAGTCCATGATGACAGGGGGTAATATCGGAAAACAGATAGTTTGTATTTCAAAAGATATTTCTCTATAATTGTCATCTTC AAGAAAAATCACACATATTTCTTTCCACCTTACACAAAGATTTTTAAGATAAATTTTTTTAAAAAAAAAGTACAGGGGGCTGGGGTTGTAGTTCTGTGGTGGAGCACTTGCCTCACATGTGTGAAGCA CTGGGTTCAATCCTGATCACCACATAAAAATAAAATAAAGGTATTGTAAAAAAAAAAGTACAGATAGCTCTTGATTTGAATGTGATCAGAAGAATATTTTCTTATGTAACTTAACTCTTTTCTATATC TTAATATCATGTGTGCACTCTACATCTAACATTACCTAAAACAATACTGAAATTAAAATGATCCATTTTTCTTTTGTTAAAACATGTATGACATGATTGTATCAGACATTCTGAAGCTACTGGAGATT TGATGCAACTGATAATGCATCAAATTTATAAATTTTTAAAAATTAATAATGTCTATTAATTTAAAATAGAATAAATATTCTATTTGATATGAGAGGCATGTAGTAAACATTTGTTGGACTGGAAAAAA AAAAAAAAACTTCACGTGATTCTTAAACTGAAACTTGGAATAAGAACAGAATTGGAATGGCCTTTCCATATGATAGGTGGAAACAGGACTTAATGGTATGATATGTATGTAAGGACTGCAGGGTAGGG TTGGTTGGGTGTGATTCAGAGCTTGTGGAACAGTTTTTGCAAAAGGAAAACAGAGGTTTGGGGTTGGGAGTGATATGAGAAAATAAATGACTGAAGTCAGTCGGTTTGAGAGACCCACAAGATTTAAT CCAAAGGATTATCTATTAATGTTTTGCCAAATAATTGACTAGACTTCCTAAAAACCCAATTTATTTTATTTTTTTTTTTAGAGAGAGAATTTTAAAGTTTATTATTATTATTATTATTTTCAGCGAAC ACAACATCTTTGTTTGTATGTGGTGCTGAGGATCGAACCCGGGCCGCACGCATGCCAAGGCAGTGCGCTACCACTTGAGCCACATCCCCAGCCCTAAAAACTCAATTTATATATTGATAAAAGCATAT GTTAATCTTAGTTTAGTGTGCACATATTGTCAAATAGTTGTCAAGATTAGAGAGCAAGTAGATATAAACTTACTGGGAATTTCAGATAACTAAACAAGGAGGTTTGGGGGTGTAACTGGGTAGCACAA CTCTGCTTGACCTTGAGGTCAGTTCCCACCACAAGAACACCTAAAAAACCCAAAATCAAAACAAAGATGGCTTCAGAAAACAACAGGACTGACTGGGAAAATTAACCAATGGTTGTAATCATGAATGT TCAAAACCTACTGATGTACCTCTAAGTAAGTTTGATTTATTAATTGTATCCAACGCTTTGAAACAATAAAATTGAAGATGTT
hide sequence
RefSeq Acc Id:
XM_040275839 ⟹ XP_040131773
Type:
CODING
Position:
Squirrel Assembly Chr Position (strand) Source HiC_Itri_2 NW_024408640 28,903,412 - 28,945,624 (-) NCBI
RefSeq Acc Id:
XP_005321273 ⟸ XM_005321216
- Peptide Label:
isoform X1
- UniProtKB:
I3MBW5 (UniProtKB/TrEMBL)
- Sequence:
MIVQQVVLNSRPGKNGNPVAENFRLEEVSIPDTINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYIAPWQLSQVVDGGGVGIIELSKHANLTKGDFVTSFYWPWQTKAILDGNSLEKVDPQLVDGHLSY FLGAIGMPGLTSLIGVQEKGHVTAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLILTSELGFDAAINYKKGNVAEQLRESCPAGVDVYFDNVGGDISDTVISQMNQNSHIILCGQI SQYNKDVPYPPPLPPAIEAIQKERNITRERFMVLNYKDKFEPGILQLSQWFKEGKLKIKETMINGLENMGAAFQSMMTGGNIGKQIVCISKDISL
hide sequence
RefSeq Acc Id:
XP_040131773 ⟸ XM_040275839
- Peptide Label:
isoform X2
Ensembl Acc Id:
ENSSTOP00000007692 ⟸ ENSSTOT00000008582