Symbol: |
Tmem218 |
Name: |
transmembrane protein 218 |
RGD ID: |
12670682 |
Description: |
ASSOCIATED WITH chromosome 11 partial duplication syndrome (ortholog); Dwarfism (ortholog); holoprosencephaly 11 (ortholog); FOUND IN cell projection (inferred); cilium (inferred); membrane (inferred) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
RGD Orthologs |
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Alliance Orthologs |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
SpeTri2.0 - Squirrel SpeTri2.0 Assembly |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 107,270,364 - 107,287,819 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936743 | 1,517,113 - 1,535,329 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936743 | 1,519,531 - 1,535,302 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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Tmem218 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 107,270,364 - 107,287,819 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936743 | 1,517,113 - 1,535,329 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936743 | 1,519,531 - 1,535,302 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TMEM218 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 125,094,389 - 125,111,626 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 125,094,389 - 125,111,763 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 124,964,285 - 124,981,522 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 124,471,608 - 124,478,415 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 122,126,435 - 122,133,242 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q24.2 | NCBI | | | | | HuRef | 11 | 120,906,345 - 120,923,734 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 124,850,310 - 124,867,709 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 125,123,053 - 125,140,287 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tmem218 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 37,119,519 - 37,134,524 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 37,119,519 - 37,135,996 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 37,208,223 - 37,223,228 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 37,208,223 - 37,224,700 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 37,015,918 - 37,030,796 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 36,958,004 - 36,972,882 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 34,421,339 - 34,437,444 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | A4 | NCBI | | | | | cM Map | 9 | 20.74 | NCBI | | | | |
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Tmem218 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 45,113,368 - 45,128,739 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 36,924,553 - 36,940,564 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 36,924,585 - 36,939,927 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 40,934,537 - 40,949,885 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 39,217,611 - 39,232,959 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 37,080,514 - 37,095,863 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 39,687,280 - 39,702,722 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 39,687,269 - 39,702,902 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 39,687,841 - 39,704,008 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 38,459,286 - 38,474,642 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 38,468,051 - 38,483,407 (+) | NCBI | | | | | Celera | 8 | 37,505,411 - 37,520,737 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q22 | NCBI | | | | |
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Tmem218 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955412 | 26,151,452 - 26,166,470 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955412 | 26,149,816 - 26,166,470 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TMEM218 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 125,791,275 - 125,807,480 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 126,897,561 - 126,912,333 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 119,924,220 - 119,938,931 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 123,838,459 - 123,853,190 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 123,839,054 - 123,843,682 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TMEM218 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 9,363,910 - 9,377,471 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 9,371,556 - 9,377,112 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 9,408,241 - 9,422,323 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 9,302,550 - 9,316,639 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 9,310,764 - 9,318,422 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 9,375,367 - 9,389,428 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 9,345,896 - 9,359,966 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 9,382,459 - 9,396,547 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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TMEM218 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 9 | 52,260,508 - 52,302,638 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 52,270,691 - 52,302,766 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 57,773,829 - 57,818,268 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TMEM218 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 116,257,539 - 116,272,815 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 116,257,158 - 116,272,859 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666043 | 9,849,776 - 9,864,598 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tmem218 (Heterocephalus glaber - naked mole-rat) |
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Ensembl Acc Id: |
ENSSTOT00000016312 ⟹ ENSSTOP00000014604 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
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SpeTri2.0 Ensembl | NW_004936743 | 1,517,113 - 1,535,329 (-) | Ensembl |
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RefSeq Acc Id: |
XM_005339533 ⟹ XP_005339590 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
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HiC_Itri_2 | NW_024404947 | 107,270,364 - 107,287,819 (-) | NCBI | SpeTri2.0 | NW_004936743 | 1,519,531 - 1,535,301 (-) | NCBI |
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Sequence: |
CCTGAATGAAAGCCCACTTGTGATTCGTTCTAAGTAGATCAAAGCCTCGGCGGACTGGAACCAGCGGGACTTTGAGGGCTTGAGTCCACGTGAAAATCGGGCAATGGGTGAGGTATCACCCATCACCA GCAGCTATTAAGCTTTATTACTCTCTACGGAGTCCATATTTGTCCTGGACAGATGGCTGGCACAGTGCTAGGAGTGGGTGCTGGCGTGTTCATCTTAGCCCTGCTCTGGGTGTTGGTGCTGCTGCTGT GTGTGCTGTTATCCAGAGCCTCCGGGATAGCTAGGTTCTCTGTCATTTTTGTATTCCTTGGTGCTGTGATCATCACGTCTGTTCTATTACTTTTTCCCCGAGCCAGTGAATTTCCAGCCCCAGAGGTC GAAACGAAGATTGTGGATGCCTTTTTCATTGGGCGCTATGTCCTGCTGGCTTTCCTCAGCGCTGTCTTCCTTGGAGGTCTCTTCTTGGTTCTAACTCATCATATCCTGGAACCAATCTATGCCAAACC ACTGCGGTCCTATTGAGCATTGTTGAGGAAAACCAAGACCTTGTTCTCCTCTGCTCCATTTTTATGTCATTGATGAGCAACAAGGGACTTCAGAGCCTTATTTTGACAGTCTTCCTATCTGAAGGCAG AGGAATTACATTCATCACTAAGACAAATCTCTTGAGCTCTGGCTTCCAGAAACAGGGTTGCAAAATTGTCCCCATGGGCATCAATTCTCACCGTTTTAGGAGGGTTGCTACTGTCTTCTTAGTACCTG CACTTAGGAATTTCATCTGTTTTGAAAGGGAAATAATAATAATAATCTTAGAGTAGATTTTCAGTCATGCTATTTATAAGTGGACTTGGCGGGAAGGATGAGCCCTTTTTGATAATATGTGAAATTCT TAGTTATAAATTATTATCATAGCTGGGTGTGGTGACACATGTAATCCCAGCTACTCAAGATGCTGAAGCAGAAGAATTGCAAGTTTGAGGCCAACCTGAGCAACTTAGTGAGACCCTGTCTCAAAAAT TTTCAAGAAAGGCTGGGAGTATAACTCGGTGATAGAGTGCTCCTGGGTTCAGTTCCCAATACCAAAAAAGAAAAAAAAGTTGTAGTTATTTGCAAAGTAAAAGCACTTAAACACAGAGGTTACTTTAA TGTGATAATTTGGAAGACTAATTTAGATGTCGGTTATTGACCACCCTATGCATATAATTTCACAGAAGCCTATAAAAGCAATGGGTATTACTTTCCTCTGCTCTAATAAAGCAATAAACAACCACCAA
hide sequence
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RefSeq Acc Id: |
XM_021719579 ⟹ XP_021575254 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
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HiC_Itri_2 | NW_024404947 | 107,270,364 - 107,287,819 (-) | NCBI | SpeTri2.0 | NW_004936743 | 1,519,531 - 1,535,302 (-) | NCBI |
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Sequence: |
GCCTGAATGAAAGCCCACTTGTGATTCGTTCTAAGTAGATCAAAGCCTCGGCGGACTGGAACCAGCGGGACTTTGAGGGCTTGAGTCCACGTGAAAATCGGGCAATGGGTGAGGTATCACCCATCACC AGCAGCTATTAAGCTTTATTACTCTCTACGGAGTCCATATTTGTCCTGGACACCATTCTTGCAGGATGGCTGGCACAGTGCTAGGAGTGGGTGCTGGCGTGTTCATCTTAGCCCTGCTCTGGGTGTTG GTGCTGCTGCTGTGTGTGCTGTTATCCAGAGCCTCCGGGATAGCTAGGTTCTCTGTCATTTTTGTATTCCTTGGTGCTGTGATCATCACGTCTGTTCTATTACTTTTTCCCCGAGCCAGTGAATTTCC AGCCCCAGAGGTCGAAACGAAGATTGTGGATGCCTTTTTCATTGGGCGCTATGTCCTGCTGGCTTTCCTCAGCGCTGTCTTCCTTGGAGGTCTCTTCTTGGTTCTAACTCATCATATCCTGGAACCAA TCTATGCCAAACCACTGCGGTCCTATTGAGCATTGTTGAGGAAAACCAAGACCTTGTTCTCCTCTGCTCCATTTTTATGTCATTGATGAGCAACAAGGGACTTCAGAGCCTTATTTTGACAGTCTTCC TATCTGAAGGCAGAGGAATTACATTCATCACTAAGACAAATCTCTTGAGCTCTGGCTTCCAGAAACAGGGTTGCAAAATTGTCCCCATGGGCATCAATTCTCACCGTTTTAGGAGGGTTGCTACTGTC TTCTTAGTACCTGCACTTAGGAATTTCATCTGTTTTGAAAGGGAAATAATAATAATAATCTTAGAGTAGATTTTCAGTCATGCTATTTATAAGTGGACTTGGCGGGAAGGATGAGCCCTTTTTGATAA TATGTGAAATTCTTAGTTATAAATTATTATCATAGCTGGGTGTGGTGACACATGTAATCCCAGCTACTCAAGATGCTGAAGCAGAAGAATTGCAAGTTTGAGGCCAACCTGAGCAACTTAGTGAGACC CTGTCTCAAAAATTTTCAAGAAAGGCTGGGAGTATAACTCGGTGATAGAGTGCTCCTGGGTTCAGTTCCCAATACCAAAAAAGAAAAAAAAGTTGTAGTTATTTGCAAAGTAAAAGCACTTAAACACA GAGGTTACTTTAATGTGATAATTTGGAAGACTAATTTAGATGTCGGTTATTGACCACCCTATGCATATAATTTCACAGAAGCCTATAAAAGCAATGGGTATTACTTTCCTCTGCTCTAATAAAGCAAT AAACAACCACCAA
hide sequence
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RefSeq Acc Id: |
XM_021719580 ⟹ XP_021575255 |
Type: |
CODING |
Position: |
Squirrel Assembly | Chr | Position (strand) | Source |
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HiC_Itri_2 | NW_024404947 | 107,270,364 - 107,287,656 (-) | NCBI | SpeTri2.0 | NW_004936743 | 1,519,531 - 1,535,213 (-) | NCBI |
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Sequence: |
TCCGGGGAAGTGGGGGTAACCCAGGAACCCAATGAGGAGAGCGGCGGTGAGGAAAGCCGGACAG ATGCGGAGTAGCGAGAAGGATGGAGACTCCGGCTGCAGAGTCTGGAAAACAGTGTGGGCAGGCGGTGCGCGGACATCACAGACTACCCTTACCGCGGGTCTGGGCCCAAGACCCGGCGGCTAATAAAT TCTTAATAGAATGCCGAGAAGGAGGGGCTGTTTTCTGTATCATGCACTTAAGAAAGTAAAATGTCAGTGCCTTCGTTTTCCTTTTGTCTGAAACCGTAATCCCTCTCCAACTGCTAGGAGGTAGTCAG GGCTTGAGTCCACGTGAAAATCGGGCAATGGGTGAGGTATCACCCATCACCAGCAGCTATTAAGCTTTATTACTCTCTACGGAGTCCATATTTGTCCTGGACAGATGGCTGGCACAGTGCTAGGAGTG GGTGCTGGCGTGTTCATCTTAGCCCTGCTCTGGGTGTTGGTGCTGCTGCTGTGTGTGCTGTTATCCAGAGCCTCCGGGATAGCTAGGTTCTCTGTCATTTTTGTATTCCTTGGTGCTGTGATCATCAC GTCTGTTCTATTACTTTTTCCCCGAGCCAGTGAATTTCCAGCCCCAGAGGTCGAAACGAAGATTGTGGATGCCTTTTTCATTGGGCGCTATGTCCTGCTGGCTTTCCTCAGCGCTGTCTTCCTTGGAG GTCTCTTCTTGGTTCTAACTCATCATATCCTGGAACCAATCTATGCCAAACCACTGCGGTCCTATTGAGCATTGTTGAGGAAAACCAAGACCTTGTTCTCCTCTGCTCCATTTTTATGTCATTGATGA GCAACAAGGGACTTCAGAGCCTTATTTTGACAGTCTTCCTATCTGAAGGCAGAGGAATTACATTCATCACTAAGACAAATCTCTTGAGCTCTGGCTTCCAGAAACAGGGTTGCAAAATTGTCCCCATG GGCATCAATTCTCACCGTTTTAGGAGGGTTGCTACTGTCTTCTTAGTACCTGCACTTAGGAATTTCATCTGTTTTGAAAGGGAAATAATAATAATAATCTTAGAGTAGATTTTCAGTCATGCTATTTA TAAGTGGACTTGGCGGGAAGGATGAGCCCTTTTTGATAATATGTGAAATTCTTAGTTATAAATTATTATCATAGCTGGGTGTGGTGACACATGTAATCCCAGCTACTCAAGATGCTGAAGCAGAAGAA TTGCAAGTTTGAGGCCAACCTGAGCAACTTAGTGAGACCCTGTCTCAAAAATTTTCAAGAAAGGCTGGGAGTATAACTCGGTGATAGAGTGCTCCTGGGTTCAGTTCCCAATACCAAAAAAGAAAAAA AAGTTGTAGTTATTTGCAAAGTAAAAGCACTTAAACACAGAGGTTACTTTAATGTGATAATTTGGAAGACTAATTTAGATGTCGGTTATTGACCACCCTATGCATATAATTTCACAGAAGCCTATAAA AGCAATGGGTATTACTTTCCTCTGCTCTAATAAAGCAATAAACAACCACCAA
hide sequence
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RefSeq Acc Id: |
XP_005339590 ⟸ XM_005339533 |
- UniProtKB: |
I3MRB3 (UniProtKB/TrEMBL) |
- Sequence: |
MAGTVLGVGAGVFILALLWVLVLLLCVLLSRASGIARFSVIFVFLGAVIITSVLLLFPRASEFPAPEVETKIVDAFFIGRYVLLAFLSAVFLGGLFLVLTHHILEPIYAKPLRSY
hide sequence
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RefSeq Acc Id: |
XP_021575254 ⟸ XM_021719579 |
- UniProtKB: |
I3MRB3 (UniProtKB/TrEMBL) |
- Sequence: |
MAGTVLGVGAGVFILALLWVLVLLLCVLLSRASGIARFSVIFVFLGAVIITSVLLLFPRASEFPAPEVETKIVDAFFIGRYVLLAFLSAVFLGGLFLVLTHHILEPIYAKPLRSY
hide sequence
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RefSeq Acc Id: |
XP_021575255 ⟸ XM_021719580 |
- UniProtKB: |
I3MRB3 (UniProtKB/TrEMBL) |
- Sequence: |
MAGTVLGVGAGVFILALLWVLVLLLCVLLSRASGIARFSVIFVFLGAVIITSVLLLFPRASEFPAPEVETKIVDAFFIGRYVLLAFLSAVFLGGLFLVLTHHILEPIYAKPLRSY
hide sequence
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Ensembl Acc Id: |
ENSSTOP00000014604 ⟸ ENSSTOT00000016312 |
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