Mgam2 (maltase-glucoamylase 2 (putative)) - Rat Genome Database

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Gene: Mgam2 (maltase-glucoamylase 2 (putative)) Ictidomys tridecemlineatus
Analyze
Symbol: Mgam2
Name: maltase-glucoamylase 2 (putative)
RGD ID: 12665412
Description: ENCODES a protein that exhibits alpha-1,4-glucosidase activity (inferred); alpha-glucosidase activity (inferred); carbohydrate binding (inferred); INVOLVED IN carbohydrate metabolic process (inferred); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: putative maltase-glucoamylase 2 (putative); putative maltase-glucoamylase-like protein FLJ16351
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511813,203,525 - 13,285,059 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493697178,610 - 149,508 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493697178,610 - 167,061 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mgam2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511813,203,525 - 13,285,059 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493697178,610 - 149,508 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493697178,610 - 167,061 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MGAM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387142,111,718 - 142,222,324 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7142,111,718 - 142,222,324 (+)EnsemblGRCh38hg38GRCh38
GRCh377141,811,518 - 141,922,124 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367141,458,018 - 141,490,252 (+)NCBINCBI36Build 36hg18NCBI36
Celera7136,589,043 - 136,621,282 (+)NCBICelera
Cytogenetic Map7q34NCBI
HuRef7136,106,676 - 136,138,931 (+)NCBIHuRef
CHM1_17141,745,780 - 141,778,014 (+)NCBICHM1_1
T2T-CHM13v2.07143,426,769 - 143,537,371 (+)NCBIT2T-CHM13v2.0
Mgam2-ps
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39640,774,758 - 40,832,524 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl640,755,645 - 40,845,098 (+)EnsemblGRCm39 Ensembl
GRCm38640,797,824 - 40,855,590 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl640,778,711 - 40,868,164 (+)EnsemblGRCm38mm10GRCm38
MGSCv37640,736,940 - 40,818,163 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36640,716,548 - 40,797,771 (+)NCBIMGSCv36mm8
Celera640,773,037 - 40,854,305 (+)NCBICelera
Cytogenetic Map6B1NCBI
cM Map618.82NCBI
Mgam2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554941,308,054 - 1,391,538 (-)NCBIChiLan1.0ChiLan1.0
MGAM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26178,891,070 - 179,004,778 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1730,901,325 - 31,015,033 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07134,033,704 - 134,146,212 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17146,504,572 - 146,616,397 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7146,509,175 - 146,616,397 (+)Ensemblpanpan1.1panPan2
MGAM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1167,053,433 - 7,119,396 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl167,034,970 - 7,114,587 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha167,892,122 - 7,978,446 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0166,954,369 - 7,040,704 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl166,956,012 - 7,036,119 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1166,907,862 - 6,994,262 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0166,749,205 - 6,836,473 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0166,817,874 - 6,904,208 (-)NCBIUU_Cfam_GSD_1.0
MGAM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl187,767,698 - 7,858,337 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1187,767,831 - 7,863,717 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2188,041,532 - 8,134,301 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MGAM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121110,843,718 - 110,951,341 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660727,544,863 - 7,654,404 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mgam2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476522,160,073 - 22,269,158 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476522,143,948 - 22,250,206 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000020515   ⟹   ENSSTOP00000015340
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493697178,610 - 149,508 (+)Ensembl
RefSeq Acc Id: XM_040289587   ⟹   XP_040145521
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440511813,203,525 - 13,285,059 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040145521 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000015340.2
GenBank Protein KAG3277339 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_040145521   ⟸   XM_040289587
RefSeq Acc Id: ENSSTOP00000015340   ⟸   ENSSTOT00000020515
Protein Domains
P-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000028880 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000020515.2 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.1180 UniProtKB/TrEMBL
  4.10.110.10 UniProtKB/TrEMBL
  Glycosidases UniProtKB/TrEMBL
  glycosyl hydrolase (family 31) UniProtKB/TrEMBL
InterPro Gal_mutarotase_sf_dom UniProtKB/TrEMBL
  Glyco_hydro_31 UniProtKB/TrEMBL
  Glyco_hydro_31_C UniProtKB/TrEMBL
  Glyco_hydro_31_N_dom UniProtKB/TrEMBL
  Glyco_hydro_b UniProtKB/TrEMBL
  Glycoside_hydrolase_SF UniProtKB/TrEMBL
  P_trefoil_dom UniProtKB/TrEMBL
  P_trefoil_dom_sf UniProtKB/TrEMBL
NCBI Gene Mgam2 ENTREZGENE
PANTHER ALPHA-GLUCOSIDASE UniProtKB/TrEMBL
  P-TYPE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam Gal_mutarotas_2 UniProtKB/TrEMBL
  Glyco_hydro_31 UniProtKB/TrEMBL
  Glyco_hydro_31_3rd UniProtKB/TrEMBL
  Trefoil UniProtKB/TrEMBL
PROSITE P_TREFOIL_2 UniProtKB/TrEMBL
SMART SM00018 UniProtKB/TrEMBL
Superfamily-SCOP Glycosyl hydrolase domain UniProtKB/TrEMBL
  SSF51445 UniProtKB/TrEMBL
  SSF57492 UniProtKB/TrEMBL
  SSF74650 UniProtKB/TrEMBL
UniProt I3MT95_ICTTR UniProtKB/TrEMBL