Mgam2 (maltase-glucoamylase 2 (putative)) - Rat Genome Database

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Gene: Mgam2 (maltase-glucoamylase 2 (putative)) Heterocephalus glaber
Analyze
Symbol: Mgam2
Name: maltase-glucoamylase 2 (putative)
RGD ID: 18917104
Description: ASSOCIATED WITH Hirschsprung's disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: putative maltase-glucoamylase-like protein FLJ16351
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476522,160,073 - 22,269,158 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476522,143,948 - 22,250,206 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mgam2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476522,160,073 - 22,269,158 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476522,143,948 - 22,250,206 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
MGAM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387142,111,718 - 142,222,324 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7142,111,718 - 142,222,324 (+)EnsemblGRCh38hg38GRCh38
GRCh377141,811,518 - 141,922,124 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367141,458,018 - 141,490,252 (+)NCBINCBI36Build 36hg18NCBI36
Celera7136,589,043 - 136,621,282 (+)NCBICelera
Cytogenetic Map7q34NCBI
HuRef7136,106,676 - 136,138,931 (+)NCBIHuRef
CHM1_17141,745,780 - 141,778,014 (+)NCBICHM1_1
T2T-CHM13v2.07143,426,769 - 143,537,371 (+)NCBIT2T-CHM13v2.0
Mgam2-ps
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39640,774,758 - 40,832,524 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl640,755,645 - 40,845,098 (+)EnsemblGRCm39 Ensembl
GRCm38640,797,824 - 40,855,590 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl640,778,711 - 40,868,164 (+)EnsemblGRCm38mm10GRCm38
MGSCv37640,736,940 - 40,818,163 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36640,716,548 - 40,797,771 (+)NCBIMGSCv36mm8
Celera640,773,037 - 40,854,305 (+)NCBICelera
Cytogenetic Map6B1NCBI
cM Map618.82NCBI
Mgam2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554941,308,054 - 1,391,538 (-)NCBIChiLan1.0ChiLan1.0
MGAM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26178,891,070 - 179,004,778 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1730,901,325 - 31,015,033 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07134,033,704 - 134,146,212 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17146,504,572 - 146,616,397 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7146,509,175 - 146,616,397 (+)Ensemblpanpan1.1panPan2
MGAM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1167,053,433 - 7,119,396 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl167,034,970 - 7,114,587 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha167,892,122 - 7,978,446 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0166,954,369 - 7,040,704 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl166,956,012 - 7,036,119 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1166,907,862 - 6,994,262 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0166,749,205 - 6,836,473 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0166,817,874 - 6,904,208 (-)NCBIUU_Cfam_GSD_1.0
Mgam2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511813,203,525 - 13,285,059 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493697178,610 - 149,508 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493697178,610 - 167,061 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MGAM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl187,767,698 - 7,858,337 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1187,767,831 - 7,863,717 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2188,041,532 - 8,134,301 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MGAM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121110,843,718 - 110,951,341 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660727,544,863 - 7,654,404 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSHGLT00000016981   ⟹   ENSHGLP00000016810
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462476522,160,073 - 22,269,158 (+)Ensembl
RefSeq Acc Id: XM_021263451   ⟹   XP_021119110
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462476522,143,948 - 22,250,206 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021119110 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021119110   ⟸   XM_021263451
RefSeq Acc Id: ENSHGLP00000016810   ⟸   ENSHGLT00000016981


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012020 Ensembl
NCBI Gene Mgam2 ENTREZGENE