Stk3 (serine/threonine kinase 3) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Stk3 (serine/threonine kinase 3) Ictidomys tridecemlineatus
Analyze
Symbol: Stk3
Name: serine/threonine kinase 3
RGD ID: 12663636
Description: ENCODES a protein that exhibits ATP binding (inferred); identical protein binding (inferred); kinase activity (inferred); INVOLVED IN apoptotic process (ortholog); canonical Wnt signaling pathway (ortholog); cell differentiation involved in embryonic placenta development (ortholog); ASSOCIATED WITH Cohen syndrome (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine kinase 3, transcript variant X1; serine/threonine kinase 3, transcript variant X2; serine/threonine kinase 3, transcript variant X3; serine/threonine-protein kinase 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530336,733,336 - 37,010,196 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647044,159,419 - 44,436,330 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647044,159,449 - 44,436,295 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic process  (IEA,ISO)
canonical Wnt signaling pathway  (IEA,ISO)
cell differentiation involved in embryonic placenta development  (IEA,ISO)
cell population proliferation  (IEA,ISO)
central nervous system development  (IEA,ISO)
endocardium development  (IEA,ISO)
epithelial cell proliferation  (IEA,ISO)
extrinsic apoptotic signaling pathway via death domain receptors  (IEA,ISO)
hepatocyte apoptotic process  (IEA,ISO)
hippo signaling  (IEA)
intracellular signal transduction  (IEA)
JNK cascade  (IEA,ISO)
negative regulation of canonical Wnt signaling pathway  (IEA,ISO)
negative regulation of cell population proliferation  (IEA,ISO)
negative regulation of epithelial cell proliferation  (IEA,ISO)
negative regulation of organ growth  (IEA,ISO)
neural tube formation  (IEA,ISO)
organ growth  (IEA,ISO)
phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IEA,ISO)
positive regulation of apoptotic process  (IEA,ISO)
positive regulation of extrinsic apoptotic signaling pathway via death domain receptors  (IEA,ISO)
positive regulation of fat cell differentiation  (IEA,ISO)
positive regulation of JNK cascade  (IEA,ISO)
positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IEA,ISO)
primitive hemopoiesis  (IEA,ISO)
protein import into nucleus  (IEA)
protein localization to centrosome  (IEA)
protein stabilization  (IEA,ISO)
protein tetramerization  (IEA)
regulation of cell differentiation involved in embryonic placenta development  (IEA,ISO)
regulation of MAPK cascade  (IEA)
signal transduction  (IEA)

Cellular Component
centrosome  (IEA,ISO)
cytoplasm  (IEA,ISO)
nucleus  (IEA)
protein-containing complex  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Stk3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530336,733,336 - 37,010,196 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647044,159,419 - 44,436,330 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647044,159,449 - 44,436,295 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38898,343,975 - 98,942,610 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl898,371,228 - 98,942,827 (-)EnsemblGRCh38hg38GRCh38
GRCh37899,466,861 - 99,954,838 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36899,536,037 - 99,907,085 (-)NCBINCBI36Build 36hg18NCBI36
Build 34899,536,042 - 99,907,085NCBI
Celera895,652,680 - 96,023,711 (-)NCBICelera
Cytogenetic Map8q22.2NCBI
HuRef894,670,086 - 95,157,575 (-)NCBIHuRef
CHM1_1899,507,181 - 99,995,466 (-)NCBICHM1_1
T2T-CHM13v2.0899,469,462 - 100,069,002 (-)NCBIT2T-CHM13v2.0
Stk3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391534,875,645 - 35,155,990 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1534,875,642 - 35,179,067 (-)EnsemblGRCm39 Ensembl
GRCm381534,875,499 - 35,155,882 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1534,875,496 - 35,178,921 (-)EnsemblGRCm38mm10GRCm38
MGSCv371534,805,254 - 35,085,561 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361534,821,196 - 35,100,274 (-)NCBIMGSCv36mm8
Celera1535,503,253 - 35,772,245 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1514.34NCBI
Stk3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8767,938,341 - 68,208,472 (-)NCBIGRCr8
mRatBN7.2766,053,209 - 66,323,292 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl766,052,345 - 66,323,233 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx767,942,463 - 68,211,608 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0770,144,143 - 70,414,225 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0770,017,776 - 70,274,776 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0773,617,926 - 73,883,896 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl773,618,644 - 73,883,812 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0773,793,705 - 74,055,204 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4770,308,195 - 70,597,445 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1770,447,334 - 70,618,175 (-)NCBI
Celera763,152,608 - 63,416,831 (-)NCBICelera
Cytogenetic Map7q22NCBI
Stk3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541714,095,694 - 14,381,607 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541714,098,851 - 14,381,553 (-)NCBIChiLan1.0ChiLan1.0
STK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27115,664,689 - 116,170,207 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1891,344,435 - 91,711,597 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0895,098,185 - 95,465,324 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1897,278,139 - 97,592,727 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl897,355,173 - 97,708,437 (-)Ensemblpanpan1.1panPan2
STK3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.113647,363 - 920,887 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl13648,216 - 920,847 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha13640,435 - 1,015,875 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.013796,957 - 1,172,656 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl13796,966 - 1,070,759 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.113639,257 - 1,015,142 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.013747,613 - 1,123,107 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.013753,947 - 1,129,925 (-)NCBIUU_Cfam_GSD_1.0
STK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl438,011,814 - 38,306,773 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1438,011,802 - 38,306,777 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2441,016,047 - 41,330,062 (+)NCBISscrofa10.2Sscrofa10.2susScr3
STK3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1893,374,528 - 93,698,143 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl893,374,517 - 93,697,758 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603947,027,424 - 47,360,853 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Stk3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247635,564,835 - 5,886,769 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247635,568,079 - 5,886,722 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSSTOT00000000651   ⟹   ENSSTOP00000000587
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647044,159,621 - 44,435,082 (+)Ensembl
RefSeq Acc Id: ENSSTOT00000041409   ⟹   ENSSTOP00000027455
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_00493647044,159,419 - 44,436,330 (+)Ensembl
RefSeq Acc Id: XM_005316308   ⟹   XP_005316365
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530336,733,336 - 37,010,196 (+)NCBI
SpeTri2.0NW_00493647044,159,449 - 44,436,295 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040293823   ⟹   XP_040149757
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530336,733,336 - 37,009,054 (+)NCBI
RefSeq Acc Id: XM_040293824   ⟹   XP_040149758
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530336,733,336 - 36,947,275 (+)NCBI
RefSeq Acc Id: XM_040293825   ⟹   XP_040149759
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530336,800,559 - 37,009,054 (+)NCBI
RefSeq Acc Id: XM_040293826   ⟹   XP_040149760
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530336,792,579 - 37,009,054 (+)NCBI
RefSeq Acc Id: XM_040293827   ⟹   XP_040149761
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440530336,792,544 - 37,009,054 (+)NCBI
RefSeq Acc Id: XP_005316365   ⟸   XM_005316308
- Peptide Label: isoform X2
- UniProtKB: A0A287D1S6 (UniProtKB/TrEMBL),   I3LX35 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040149757   ⟸   XM_040293823
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040149758   ⟸   XM_040293824
- Peptide Label: isoform X3
- UniProtKB: I3LX35 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_040149761   ⟸   XM_040293827
- Peptide Label: isoform X5
RefSeq Acc Id: XP_040149760   ⟸   XM_040293826
- Peptide Label: isoform X5
RefSeq Acc Id: XP_040149759   ⟸   XM_040293825
- Peptide Label: isoform X4
RefSeq Acc Id: ENSSTOP00000000587   ⟸   ENSSTOT00000000651
RefSeq Acc Id: ENSSTOP00000027455   ⟸   ENSSTOT00000041409
Protein Domains
Protein kinase   SARAH


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000000651 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000000651.3 UniProtKB/TrEMBL
  ENSSTOT00000041409.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.4270 UniProtKB/TrEMBL
  4.10.170.10 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Kinase-like_dom_sf UniProtKB/TrEMBL
  Mst1_SARAH_domain UniProtKB/TrEMBL
  Mst2_SARAH UniProtKB/TrEMBL
  p53_tetramer_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  SARAH_dom UniProtKB/TrEMBL
NCBI Gene Stk3 ENTREZGENE
PANTHER SERINE/THREONINE-PROTEIN KINASE 3 UniProtKB/TrEMBL
  SERINE/THREONINE-PROTEIN KINASE TAO UniProtKB/TrEMBL
Pfam Mst1_SARAH UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  SARAH UniProtKB/TrEMBL
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A287D1S6 ENTREZGENE, UniProtKB/TrEMBL
  I3LX35 ENTREZGENE, UniProtKB/TrEMBL