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Gene: Hacd2 (3-hydroxyacyl-CoA dehydratase 2) Ictidomys tridecemlineatus

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Symbol:

Hacd2

Name:

3-hydroxyacyl-CoA dehydratase 2

RGD ID:

12659987

Description:

ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (inferred); fatty acid elongation (inferred); fatty acid metabolic process (inferred); ASSOCIATED WITH alkaptonuria (ortholog); familial hypocalciuric hypercalcemia (ortholog); Familial Thoracic Aortic Aneurysm 7 (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b; Ptplb; very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	127,706,184 - 127,796,663 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936725	1,614,622 - 1,705,132 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936725	1,614,637 - 1,705,111 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Hacd2	Squirrel	alkaptonuria		ISO	HACD2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Alkaptonuria	ClinVar	PMID:12501223 more ...
Hacd2	Squirrel	familial hypocalciuric hypercalcemia		ISO	HACD2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Familial hypocalciuric hypercalcemia	ClinVar	PMID:28492532
Hacd2	Squirrel	Familial Thoracic Aortic Aneurysm 7		ISO	HACD2 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Aortic aneurysm and familial thoracic 7	ClinVar	PMID:21055718 more ...
Hacd2	Squirrel	Primary Lymphedema with Myelodysplasia		ISO	HACD2 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:19449416 more ...

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Hacd2	Squirrel	fatty acid biosynthetic process	involved_in	IEA	UniPathway:UPA00094	150520179		UniProt	GO_REF:0000041
Hacd2	Squirrel	fatty acid biosynthetic process	involved_in	IEA	UniProtKB-KW:KW-0275	150520179		UniProt	GO_REF:0000043
Hacd2	Squirrel	fatty acid elongation	involved_in	IEA	UniProtKB:Q6Y1H2 and ensembl:ENSP00000373153	150520179		Ensembl	GO_REF:0000107
Hacd2	Squirrel	fatty acid elongation	involved_in	IEA	PANTHER:PTN000112316	150520179		TreeGrafter	GO_REF:0000118
Hacd2	Squirrel	fatty acid metabolic process	involved_in	IEA	UniProtKB-KW:KW-0276	150520179		UniProt	GO_REF:0000043
Hacd2	Squirrel	lipid metabolic process	involved_in	IEA	UniProtKB-KW:KW-0443	150520179		UniProt	GO_REF:0000043
Hacd2	Squirrel	sphingolipid biosynthetic process	involved_in	IEA	UniProtKB:Q6Y1H2 and ensembl:ENSP00000373153	150520179		Ensembl	GO_REF:0000107
Hacd2	Squirrel	sphingolipid biosynthetic process	involved_in	IEA	PANTHER:PTN000112316	150520179		TreeGrafter	GO_REF:0000118
Hacd2	Squirrel	very long-chain fatty acid biosynthetic process	involved_in	IEA	UniProtKB:Q6Y1H2 and ensembl:ENSP00000373153	150520179		Ensembl	GO_REF:0000107
Hacd2	Squirrel	very long-chain fatty acid biosynthetic process	involved_in	IEA	PANTHER:PTN000112316	150520179		TreeGrafter	GO_REF:0000118

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Hacd2	Squirrel	endoplasmic reticulum	located_in	IEA	UniProtKB:Q6Y1H2 and ensembl:ENSP00000373153	150520179		Ensembl	GO_REF:0000107
Hacd2	Squirrel	endoplasmic reticulum	located_in	IEA	UniProtKB-KW:KW-0256	150520179		UniProt	GO_REF:0000043
Hacd2	Squirrel	endoplasmic reticulum membrane	located_in	IEA	UniProtKB-SubCell:SL-0097	150520179		UniProt	GO_REF:0000044
Hacd2	Squirrel	endoplasmic reticulum membrane	located_in	IEA	PANTHER:PTN000112316	150520179		TreeGrafter	GO_REF:0000118
Hacd2	Squirrel	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
Hacd2	Squirrel	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Hacd2	Squirrel	3-hydroxyacyl-CoA dehydratase activity	enables	IEA	PANTHER:PTN000112316	150520179		TreeGrafter	GO_REF:0000118
Hacd2	Squirrel	enzyme binding	enables	IEA	UniProtKB:Q6Y1H2 and ensembl:ENSP00000373153	150520179		Ensembl	GO_REF:0000107
Hacd2	Squirrel	lyase activity	enables	IEA	UniProtKB-KW:KW-0456	150520179		UniProt	GO_REF:0000043
Hacd2	Squirrel	protein binding	enables	ISO	UniProtKB:P51572	9068941	PMID:15024066	IntAct	PMID:15024066
Hacd2	Squirrel	protein binding	enables	ISO	UniProtKB:Q9NZ01	9068941	PMID:25416956 more ...	UniProt	PMID:25416956 more ...
Hacd2	Squirrel	protein binding	enables	ISO	UniProtKB:B2RUZ4 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Hacd2	Squirrel	protein tyrosine phosphatase activity	NOT\|enables	ISO	HACD2 (Homo sapiens)	9068941	PMID:15024066	UniProt	PMID:15024066
Hacd2	Squirrel	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity	enables	IEA	RHEA:45812	150520179		RHEA	GO_REF:0000116
Hacd2	Squirrel	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity	enables	IEA	EC:4.2.1.134	150520179		UniProt	GO_REF:0000003
Hacd2	Squirrel	very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity	enables	IEA	UniProtKB:Q6Y1H2 and ensembl:ENSP00000373153	150520179		Ensembl	GO_REF:0000107

PMID:30032202

Hacd2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	127,706,184 - 127,796,663 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936725	1,614,622 - 1,705,132 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936725	1,614,637 - 1,705,111 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HACD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	123,491,554 - 123,585,053 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	123,490,820 - 123,585,053 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	123,210,401 - 123,303,900 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	124,693,091 - 124,786,726 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	121,620,589 - 121,710,855 (-)	NCBI		Celera
Cytogenetic Map	3	q21.1	NCBI
HuRef	3	120,585,854 - 120,675,943 (-)	NCBI		HuRef
CHM1_1	3	123,176,722 - 123,266,949 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	126,211,843 - 126,305,184 (-)	NCBI		T2T-CHM13v2.0

Hacd2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	34,842,791 - 34,929,560 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	34,842,798 - 34,929,547 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	35,022,421 - 35,109,190 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	35,022,428 - 35,109,177 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	35,022,507 - 35,109,261 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	34,942,168 - 35,028,922 (+)	NCBI		MGSCv36	mm8
Celera	16	35,490,337 - 35,577,166 (+)	NCBI		Celera
Cytogenetic Map	16	B3	NCBI
cM Map	16	24.54	NCBI

Hacd2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	79,175,470 - 79,268,975 (-)	NCBI		GRCr8
mRatBN7.2	11	65,667,671 - 65,762,903 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	65,670,281 - 65,762,889 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	74,493,218 - 74,584,605 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	67,155,521 - 67,247,060 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	66,186,803 - 66,277,005 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	68,985,497 - 68,990,023 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	68,894,445 - 68,989,988 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	71,984,627 - 72,076,335 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	67,489,819 - 67,581,576 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	67,547,407 - 67,639,377 (-)	NCBI
Celera	11	65,126,730 - 65,218,607 (-)	NCBI		Celera
Cytogenetic Map	11	q22	NCBI

Hacd2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955427	22,642,478 - 22,734,271 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955427	22,642,509 - 22,733,170 (-)	NCBI	ChiLan1.0	ChiLan1.0

HACD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	121,444,788 - 121,541,033 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	121,449,561 - 121,545,414 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	120,588,195 - 120,684,177 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	127,489,213 - 127,584,408 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

HACD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	33	26,530,221 - 26,643,477 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	33	26,533,114 - 26,637,035 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	33	26,552,163 - 26,662,964 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	33	26,763,562 - 26,874,428 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	33	26,763,600 - 26,874,550 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	33	26,558,486 - 26,669,848 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	33	26,603,816 - 26,714,547 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	33	27,214,911 - 27,326,501 (-)	NCBI		UU_Cfam_GSD_1.0

HACD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	136,834,115 - 136,933,549 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	136,834,103 - 136,933,564 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	146,240,168 - 146,258,854 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HACD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	57,285,948 - 57,379,894 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	57,322,657 - 57,381,683 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	108,966,635 - 109,066,981 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hacd2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624912	1,814,906 - 1,917,009 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624912	1,814,906 - 1,916,584 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005338884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000024203 ⟹ ENSSTOP00000023574

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936725	1,614,622 - 1,705,132 (+)	Ensembl

RefSeq Acc Id:

XM_005338884 ⟹ XP_005338941

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	127,706,184 - 127,796,663 (+)	NCBI
SpeTri2.0	NW_004936725	1,614,637 - 1,705,111 (+)	NCBI

Sequence:

show sequence

CCTGTCGAGTCGGGTCCGAGGTGCTCGCGCAGAGAGAGCAGGCTGCGGGCACTTGACATGGCGGCAGCGGCGGCGACTGCAGCGACAAAAGGGAATGGAGCCGGCGGTGGCCGGGTCGGGGCGGGCGA
AGCCGCCGGCACGCGGAAGAAGAAGGGCCCGGGGCCTCTGGCCACGGCGTACCTGGTCATCTACAATGTGGTGATGACCGCGGGGTGGTTGGTTATAGCAGTTGGTTTGGTCAGAGCATACCTGGCTA
AGGGGAGCTACCATAGCCTTTATTATTCAATTGAAAAGCCTTTGAAATTCTTCCAAACTGGAGCCTTATTGGAGATTTTACATTGTGCTATAGGAATTGTTCCATCTTCCGTTGTCCTGACTTCTTTC
CAGGTGATGTCAAGAGTTTTTCTAATATGGGCAGTGACACATAGTGTCAAAGAGGTTCAGAGTGAAGACAGCGTCCTCCTGTTTGTTATTGCCTGGACAATCACGGAAATTATCCGTTACTCCTTTTA
TACATTCAGTCTATTAAACCATCTGCCTTACCTCATCAAATGGGCCAGGTACACACTTTTCATCGTGCTGTACCCCATGGGAGTGTCCGGAGAACTGCTCACCATCTATGCAGCTCTACCCTTTGTCA
GGCAGGCTGGCCTGTACTCCATCAGTTTACCCAACAAATACAACTTCTCCTTTGACTACCATGCCTTCCTGATTCTGGTCATGATCTCCTACATTCCAATTTTTCCCCAGTTATACTTCCACATGATA
CACCAGAGAAGAAAGATCCTTTCTCATACTGAAGAACACAAGAAATTTGAATAGATCCGGCTTTCTGCACCCCCTCAACCAAACTTTTCAATGATCAAAAAATGCTGCAGACTTTTTGAGTTCCCAGT
ACGTTTCATAGAATATAAGTAAGAACTATTTTTAAAATACTAAAACAAAACAAAAACCAAACTCCAGTGTCACATGGGCCTGGGATTTTATAAAAAGAAAAAGAAAAGAAAAAAAAAGGCTGTTACAT
ACAATGTCCTGGCTGGTCCATTTCCGCATGCTCTTCCAACCAGAAGATCCCAATATTCACGATGGCGCTAGAAAGGGATTTGGCATTTTATCTCCTATGTCCTTCCTGTATCTGGTAAATAAAGGTCT
GTAACACTAACTACTTGAGAGTTACAGTCTGAGCATTGAAGTTGCACCAGCTGGCAGCGGAGTTGAGCTGCAGCCTGCAGTGCGTTCGCATTCCCTTCTCAAAGTGCTTGACTGCATGCTGGAAAACT
ATTTGTATTTTTGAAGCGGCAAACTTTGTTCTCTGGAATGCTCTGAAGTTATGGCTGGGACCTAGCTCCTCATATCTAGTGAATGAATTCTAAAACGTATATGCCTGTGAAGCTTTGGGGTAGTGCCC
TTAAACAGAAAACCACTAGAGCCTTTCCGTTTGTTTTCAGTTGAGTCATTACTGCCTGCCACTAAGAAATGTGCTTGAATTTAATAAGTATGTGTATATTGTAAAGAACCTAACTTACCTGGAGCTCG
GCCTCAATCTTATTTTAATAAATGACAGTTCTCTGAGAGGTAAAACTCAATAGTTAGTAAGTGACAAGTACCTTGCCCAGTACTGTTTGCAGAGCACCTCTGAGTAATGTATCTGCCAATAGCTATTC
TCATTTATGGACTCGAAACCCATCTCGTCACATAGGAGCAGGGAGTCTATTATTAAAAGCATATAGAAGGTGTTGCTTTGGAAATGTAGTTTGGGAAAGCATTCAGGAATGGCTTTATATACTGTTAT
TTAATGTTTAATTCACTCTTCTGTCTAGATAATTTGCCTAACTATGGTCCTGTGTTAATTCCCACCAACTTGTCGATTCAGAGGCAGCTTATGTTCTGAATGGGCAGTCTTGAGCTAAAAGCAGATCA
TCTCTGCATGTTGGAGCAGCCACAGAATAGTTTGGTCCTGTGGACAGTGCTATGTCTTCATGCTATTTAATTGTTCAGTTGTGCATTAAAACCCAAGAAAGGGTTGGATGAAAATGTAAACCCAAGAT
GAGATTGATAACACAGCTTAGATTATAACATAGTATCTTTATGGAGTTTTTTTCCTTCTTCATTATTTTTTCTTCTTTTAGTTGTTGATCTTTAAAAGTCTAGCTTAGATGAGTAAATGTCACTTAAA
ATATAATTGATAATATCAGAAAAATGTTAATTTAAAACGAAATTTTTAAATCCTTTTTTTTTTTTTTTTTGGTCCATAAAAGCTTGAAGAGCTCATGCGGGCAGGTGTGTACTAAATTATTTTTTAAT
CAAACATTAAGATTCTACTTGGCCAAGTCAACACTTGAGTTAGATCTATTCTTTTACATGTGGGAAATTTGTTTTTATGCTTTTTTTCTCTTCATACTTTTCCAAAATATATTTCTACTGTAAAATAG
CGTCAGCTTGGGTATCATATCAGCCTCATAACTGGATTTGGTTAAGATTTTTTCCTTTGTTTTTGGGGTTGTTGCAGAAGGTGGGGTGGAAAGGGCAGGTTTTCCAGCATTGCAGGACGGGGAGTTTC
ATTCAAGTCTATTATCATTTGTCACATTTATGGAAAATATTGTACTGCCTACAGTGGGATTACATCAGATTGAACTTTGGCAATGAGGACATAGCAAACAACTCCCTTTTCCAAAAGGGTCTCAACCC
CCCACGTGCGTTTTGTACATCAGTGTTTCAAATACTTATGGCAGATAAGTAAGGCATGTCACTGTGTCCTTCCGTAACCTCTCTCAGTCACTTTCTTTTTCTCCCTAACACAAGTTAATTTCTCCTTT
GAAGTGGTGGTGTTCTTTTATAAATTTGAGCACATCCAACCCCACCAGATGTCACATCTTCTTATGAAGTGTGAACAAGGAAGGTGATGTTCAGTGGGTATTTTGTCAGACTTAGAAGTTTAATTTCA
GTGCATAGTCAAAGACAGATTGCTGTTGCAGACCCCCACTGGGGCCCCTTTGAGGTGTGCTTTGAGGTTTATGCAGCTTCACAGACACAAGCTGCTGATTTGCATCTTGCTGCATCCTGCTTGCTGGG
GTTGGGATCTCATCACACTGTCCTCCCACATGGGGAAGTGCCTCTAAAGCAGGCTTTGGGTGGGAAGGAAGGTGTGGAGCCCAGGAGGCATGTGGGGAATCAGGCCCTCCTGACCCTGTTGTATTGGT
TATGCGGTTCTAATAAAAGACTGGTGTCAATGTGGTCCAACCTGAGCATTGTTTTCAGTTCTGAGTTTCAGATCAACCATTCTAAAACATCAAATCCAATATACAGTGATCCTTTAAAATTTGGGTAA
AAAAAAAATTATACAACCAGATATATAATCATTTTTGTATTTTTTCTATGTTGTGAAAACCAAAATTGTAATTTTATAAGTCTTTGATTCACTAAAATTATATAATTTAAATGTATTTTTTGTATATT
TAGAAATAAGGAGTTCAAAGACTATGCTTAAACTTTCTATGCATGCATTTGAAAGCTGTTTTTACCTGAAAATGTTAATGTAGTAATAAGTTGTATTCATAAAATACTGATCTGTGTTGCATTTCAAA
ATAAATTGGTGTGTGCTCTGCCTGGA

hide sequence


Protein RefSeqs	XP_005338941	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000023574.1
GenBank Protein	KAG3271324	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005338941 ⟸ XM_005338884

- UniProtKB:

I3NGS7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAAAAATAATKGNGAGGGRVGAGEAAGTRKKKGPGPLATAYLVIYNVVMTAGWLVIAVGLVRAYLAKGSYHSLYYSIEKPLKFFQTGALLEILHCAIGIVPSSVVLTSFQVMSRVFLIWAVTHSVKEV
QSEDSVLLFVIAWTITEIIRYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVSGELLTIYAALPFVRQAGLYSISLPNKYNFSFDYHAFLILVMISYIPIFPQLYFHMIHQRRKILSHTEEHKKFE

hide sequence

Ensembl Acc Id:

ENSSTOP00000023574 ⟸ ENSSTOT00000024203

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000023651	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000024203.2	UniProtKB/TrEMBL
InterPro	Tyr_Pase-like_PTPLA	UniProtKB/TrEMBL
NCBI Gene	Hacd2	ENTREZGENE
PANTHER	PTHR11035	UniProtKB/TrEMBL
	VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 2	UniProtKB/TrEMBL
Pfam	PTPLA	UniProtKB/TrEMBL
UniProt	I3NGS7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar