Ttc1 (tetratricopeptide repeat domain 1)

Gene: Ttc1 (tetratricopeptide repeat domain 1) Ictidomys tridecemlineatus

Analyze

Symbol:

Ttc1

Name:

tetratricopeptide repeat domain 1

RGD ID:

12657882

Description:

ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tetratricopeptide repeat domain 1, transcript variant X1; tetratricopeptide repeat domain 1, transcript variant X2; tetratricopeptide repeat domain 1, transcript variant X3; tetratricopeptide repeat protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	104,993,600 - 105,042,248 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936515	3,442,950 - 3,491,596 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936515	3,442,946 - 3,491,566 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytosol (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

Ttc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	104,993,600 - 105,042,248 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936515	3,442,950 - 3,491,596 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936515	3,442,946 - 3,491,566 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TTC1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	160,009,139 - 160,065,543 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	160,009,113 - 160,065,543 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	159,436,146 - 159,492,550 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	159,368,758 - 159,425,128 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	159,368,757 - 159,425,128	NCBI
Celera	5	155,467,734 - 155,524,106 (+)	NCBI		Celera
Cytogenetic Map	5	q33.3	NCBI
HuRef	5	154,530,645 - 154,586,936 (+)	NCBI		HuRef
CHM1_1	5	158,869,248 - 158,925,563 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	160,537,708 - 160,594,091 (+)	NCBI		T2T-CHM13v2.0

Ttc1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	43,620,833 - 43,638,835 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	43,620,339 - 43,638,835 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	43,730,006 - 43,748,008 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	43,729,512 - 43,748,008 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	43,543,508 - 43,561,475 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	43,573,429 - 43,591,396 (-)	NCBI		MGSCv36	mm8
Celera	11	48,356,243 - 48,374,211 (-)	NCBI		Celera
Cytogenetic Map	11	B1.1	NCBI
cM Map	11	25.81	NCBI

Ttc1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	28,703,763 - 28,728,910 (-)	NCBI		GRCr8
mRatBN7.2	10	28,202,325 - 28,227,464 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	28,202,325 - 28,227,472 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	32,961,807 - 32,986,888 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	1,500,181 - 1,525,262 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	27,932,350 - 27,957,431 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	29,342,495 - 29,367,865 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	29,342,495 - 29,367,865 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	29,182,723 - 29,208,144 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	28,836,004 - 28,860,967 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	28,837,052 - 28,862,016 (-)	NCBI
Celera	10	27,691,761 - 27,716,918 (-)	NCBI		Celera
Cytogenetic Map	10	q21	NCBI

Ttc1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955408	13,966,821 - 14,007,238 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955408	13,966,957 - 14,007,238 (+)	NCBI	ChiLan1.0	ChiLan1.0

TTC1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	155,194,236 - 155,250,926 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	153,333,784 - 153,390,474 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	155,399,781 - 155,456,454 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	162,015,981 - 162,072,884 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	162,015,845 - 162,072,884 (+)	Ensembl	panpan1.1		panPan2

TTC1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	50,603,649 - 50,650,470 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	50,603,650 - 50,650,358 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	50,497,755 - 50,544,559 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	51,038,378 - 51,085,271 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	51,038,378 - 51,084,834 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	50,846,846 - 50,893,426 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	50,969,971 - 51,016,779 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	51,490,523 - 51,537,395 (-)	NCBI		UU_Cfam_GSD_1.0

TTC1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	63,455,734 - 63,523,354 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	63,458,350 - 63,515,517 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	16	68,949,772 - 69,028,497 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TTC1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	62,375,085 - 62,431,062 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	62,375,150 - 62,430,583 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	15,177,065 - 15,233,405 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ttc1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624733	29,452,765 - 29,502,588 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624733	29,443,789 - 29,502,702 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005325427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013358698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013358699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010002273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000020929 ⟹ ENSSTOP00000017713

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936515	3,442,950 - 3,491,596 (-)	Ensembl

RefSeq Acc Id:

XM_005325427 ⟹ XP_005325484

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	104,993,600 - 105,042,193 (-)	NCBI
SpeTri2.0	NW_004936515	3,442,946 - 3,491,566 (-)	NCBI

Sequence:

show sequence

TGCACCTGACTGAGCGGAAGTAGAAGGTCTGGGAGACTGGCTAGGTAGAGTGCGGAGGATCTGT
GAAGCTGTGAGTAGCCGGTGGGTCTGGCGGCGTGACGAGTTTCAGCCTCCCTCCCTTTCTGAAT
TCAGCATGGAGGAGAAGTCAGAGAACTGTAAGGTTCCAGAGGATCTATTCAATGGTTTGAAGGT
TACAGATCCCCAAGAAGCAGAGAGTGCAAGCCCTGCAGTTCCTGATCCCAAAGATGAGCATTCC
CAGAGCAAGCTGCCAAAGGATGACAAGGCCCATCCCCAGGATGACCAGGGAGAAGAGGAGTATT
TTCATGACTGCAGTGCCTCATTCGAGGAGGAGGAACCAGGAATGGATAAGGCTGAGAGCAAAGT
TGATGATGGTGTGAATTCCTCTGAACTAGATGAAGAATACCTAATAGAACTGGAAAAAAACATG
CCAGATGAAGAGAAACAGAAAAGGAGAGAGGAGAGCACTAGACTAAAGGAGGAGGGAAATGAGC
AGTTTAAGAAAGGAGATTATATAGAAGCCGAAAGTTCTTATAGTCGAGCCCTTCAGATGTGCCC
ATCCTGCTTCCAGAAAGACAGATCAATTCTATTTTCAAATAGAGCTGCTGCAAGGATGAAGCAG
GACAAGAAGGACATGGCCATCAATGACTGCAGCAAAGCAATTAAGCTGAACCCCAGCTACATCA
GGGCAATTTTGAGGAGAGCGGAGTTGTATGAGAAGACAGACAAGCTAGATGAAGCCCTGGAAGA
CTATAAATCTATATTGGAAAAAGATCCATCCATACATCAAGCAAGAGAAGCTTGTATGAGATTA
CCTAAGCAAATTGAAGAACGTAATGAAAGACTAAAAGAAGAGATGTTAGGTAAACTAAAAGATC
TTGGGAACTTGGTTCTCCGACCTTTTGGGCTCTCCACAGAAAATTTCCAGATCAAACAAGATTC
CTCTACTGGCTCCTACTCCATCAATTTTGTTCAGAATCCAAATAATAACAGATAACAAAGATAA
CAATAGCTTTAAAACCTGACTTGGAAATTGTGTGCTGCTTGCTGTTCGCAAGGGGCAAGGCCCT
GCCAATATTTAATTTTCAAAAGCATCTTAATCTAAGCTAGTCCAAAAGGCTACCAGTAGAGCCT
AGAGCCGCCTTTTCACTCTTGTTTCATGGTCAGAGTGGAAGGTACTTCTAATGCAATGAGCCTC
ATTTGATTTCATTTTAAGGTGGTGTCTGTGCAGCTGTTGTCCCTGGTTCTGACCGTCCTTTGTC
CGGGAGGAAGTCTGCTTGGCAAGGCTGACTTCCCTGAGCCACACAAACCCACTAGCCTAGCAGA
CCTGTTTCTGGGAGACTGCCTGGATGACAGCCTCCCTGGGGTCCCTGAAGTCTGCTGCCCCTCC
CTGATCACACAGCTCCTGGCTGCTGTGCAGGGTCTCCAGGATTCCCTGGTTTCCTCTGTAATAA
TAAAAGCTTTCTTTCGTGGTCTGGA

hide sequence

RefSeq Acc Id:

XM_013358698 ⟹ XP_013214152

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	104,993,864 - 105,042,248 (-)	NCBI
SpeTri2.0	NW_004936515	3,443,400 - 3,491,565 (-)	NCBI

Sequence:

show sequence

GCACCTGACTGAGCGGAAGTAGAAGGTCTGGGAGACTGGCTAGGTAGAGTGCGGAGGATCTGTG
AAGCTGTGAGTAGCCGAGTTTCAGCCTCCCTCCCTTTCTGAATTCAGCATGGAGGAGAAGTCAG
AGAACTGTAAGGTTCCAGAGGATCTATTCAATGGTTTGAAGGTTACAGATCCCCAAGAAGCAGA
GAGTGCAAGCCCTGCAGTTCCTGATCCCAAAGATGAGCATTCCCAGAGCAAGCTGCCAAAGGAT
GACAAGGCCCATCCCCAGGATGACCAGGGAGAAGAGGAGTATTTTCATGACTGCAGTGCCTCAT
TCGAGGAGGAGGAACCAGGAATGGATAAGGCTGAGAGCAAAGTTGATGATGGTGTGAATTCCTC
TGAACTAGATGAAGAATACCTAATAGAACTGGAAAAAAACATGCCAGATGAAGAGAAACAGAAA
AGGAGAGAGGAGAGCACTAGACTAAAGGAGGAGGGAAATGAGCAGTTTAAGAAAGGAGATTATA
TAGAAGCCGAAAGTTCTTATAGTCGAGCCCTTCAGATGTGCCCATCCTGCTTCCAGAAAGACAG
ATCAATTCTATTTTCAAATAGAGCTGCTGCAAGGATGAAGCAGGACAAGAAGGACATGGCCATC
AATGACTGCAGCAAAGCAATTAAGCTGAACCCCAGCTACATCAGGGCAATTTTGAGGAGAGCGG
AGTTGTATGAGAAGACAGACAAGCTAGATGAAGCCCTGGAAGACTATAAATCTATATTGGAAAA
AGATCCATCCATACATCAAGCAAGAGAAGCTTGTATGAGATTACCTAAGCAAATTGAAGAACGT
AATGAAAGACTAAAAGAAGAGATGTTAGGTAAACTAAAAGATCTTGGGAACTTGGTTCTCCGAC
CTTTTGGGCTCTCCACAGAAAATTTCCAGATCAAACAAGATTCCTCTACTGGCTCCTACTCCAT
CAATTTTGTTCAGAATCCAAATAATAACAGATAACAAAGATAACAATAGCTTTAAAACCTGA

hide sequence

RefSeq Acc Id:

XM_013358699 ⟹ XP_013214153

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	104,993,864 - 105,042,248 (-)	NCBI
SpeTri2.0	NW_004936515	3,443,400 - 3,491,565 (-)	NCBI

Sequence:

show sequence

GCACCTGACTGAGCGGAAGTAGAAGGTCTGGGAGACTGGCTAGGTAGAGTGCGGAGGATCTGTG
AAGCTAGTTTCAGCCTCCCTCCCTTTCTGAATTCAGCATGGAGGAGAAGTCAGAGAACTGTAAG
GTTCCAGAGGATCTATTCAATGGTTTGAAGGTTACAGATCCCCAAGAAGCAGAGAGTGCAAGCC
CTGCAGTTCCTGATCCCAAAGATGAGCATTCCCAGAGCAAGCTGCCAAAGGATGACAAGGCCCA
TCCCCAGGATGACCAGGGAGAAGAGGAGTATTTTCATGACTGCAGTGCCTCATTCGAGGAGGAG
GAACCAGGAATGGATAAGGCTGAGAGCAAAGTTGATGATGGTGTGAATTCCTCTGAACTAGATG
AAGAATACCTAATAGAACTGGAAAAAAACATGCCAGATGAAGAGAAACAGAAAAGGAGAGAGGA
GAGCACTAGACTAAAGGAGGAGGGAAATGAGCAGTTTAAGAAAGGAGATTATATAGAAGCCGAA
AGTTCTTATAGTCGAGCCCTTCAGATGTGCCCATCCTGCTTCCAGAAAGACAGATCAATTCTAT
TTTCAAATAGAGCTGCTGCAAGGATGAAGCAGGACAAGAAGGACATGGCCATCAATGACTGCAG
CAAAGCAATTAAGCTGAACCCCAGCTACATCAGGGCAATTTTGAGGAGAGCGGAGTTGTATGAG
AAGACAGACAAGCTAGATGAAGCCCTGGAAGACTATAAATCTATATTGGAAAAAGATCCATCCA
TACATCAAGCAAGAGAAGCTTGTATGAGATTACCTAAGCAAATTGAAGAACGTAATGAAAGACT
AAAAGAAGAGATGTTAGGTAAACTAAAAGATCTTGGGAACTTGGTTCTCCGACCTTTTGGGCTC
TCCACAGAAAATTTCCAGATCAAACAAGATTCCTCTACTGGCTCCTACTCCATCAATTTTGTTC
AGAATCCAAATAATAACAGATAACAAAGATAACAATAGCTTTAAAACCTGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005325484	(Get FASTA)	NCBI Sequence Viewer
	XP_013214152	(Get FASTA)	NCBI Sequence Viewer
	XP_013214153	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000017713.1
GenBank Protein	KAG3265363	(Get FASTA)	NCBI Sequence Viewer
	KAG3265364	(Get FASTA)	NCBI Sequence Viewer
	KAG3265365	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005325484 ⟸ XM_005325427

- UniProtKB:

I3N017 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEEKSENCKVPEDLFNGLKVTDPQEAESASPAVPDPKDEHSQSKLPKDDKAHPQDDQGEEEYFH
DCSASFEEEEPGMDKAESKVDDGVNSSELDEEYLIELEKNMPDEEKQKRREESTRLKEEGNEQF
KKGDYIEAESSYSRALQMCPSCFQKDRSILFSNRAAARMKQDKKDMAINDCSKAIKLNPSYIRA
ILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLG
NLVLRPFGLSTENFQIKQDSSTGSYSINFVQNPNNNR

hide sequence

RefSeq Acc Id:

XP_013214153 ⟸ XM_013358699

- UniProtKB:

I3N017 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEEKSENCKVPEDLFNGLKVTDPQEAESASPAVPDPKDEHSQSKLPKDDKAHPQDDQGEEEYFH
DCSASFEEEEPGMDKAESKVDDGVNSSELDEEYLIELEKNMPDEEKQKRREESTRLKEEGNEQF
KKGDYIEAESSYSRALQMCPSCFQKDRSILFSNRAAARMKQDKKDMAINDCSKAIKLNPSYIRA
ILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLG
NLVLRPFGLSTENFQIKQDSSTGSYSINFVQNPNNNR

hide sequence

RefSeq Acc Id:

XP_013214152 ⟸ XM_013358698

- UniProtKB:

I3N017 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEEKSENCKVPEDLFNGLKVTDPQEAESASPAVPDPKDEHSQSKLPKDDKAHPQDDQGEEEYFH
DCSASFEEEEPGMDKAESKVDDGVNSSELDEEYLIELEKNMPDEEKQKRREESTRLKEEGNEQF
KKGDYIEAESSYSRALQMCPSCFQKDRSILFSNRAAARMKQDKKDMAINDCSKAIKLNPSYIRA
ILRRAELYEKTDKLDEALEDYKSILEKDPSIHQAREACMRLPKQIEERNERLKEEMLGKLKDLG
NLVLRPFGLSTENFQIKQDSSTGSYSINFVQNPNNNR

hide sequence

RefSeq Acc Id:

ENSSTOP00000017713 ⟸ ENSSTOT00000020929

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000024913	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000020929.2	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
InterPro	TPR-like_helical_dom_sf	UniProtKB/TrEMBL
	TPR_1	UniProtKB/TrEMBL
	TPR_repeat	UniProtKB/TrEMBL
NCBI Gene	Ttc1	ENTREZGENE
PANTHER	TETRATRICOPEPTIDE REPEAT PROTEIN 1	UniProtKB/TrEMBL
	TETRATRICOPEPTIDE REPEAT PROTEIN 1	UniProtKB/TrEMBL
Pfam	TPR_1	UniProtKB/TrEMBL
	TPR_8	UniProtKB/TrEMBL
PROSITE	TPR	UniProtKB/TrEMBL
SMART	TPR	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48452	UniProtKB/TrEMBL
UniProt	I3N017	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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