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Gene: Gtf3c1 (general transcription factor IIIC subunit 1) Ictidomys tridecemlineatus

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Symbol:

Gtf3c1

Name:

general transcription factor IIIC subunit 1

RGD ID:

12629202

Description:

ENCODES a protein that exhibits DNA binding (inferred); RNA polymerase III general transcription initiation factor activity (inferred); INVOLVED IN 5S class rRNA transcription by RNA polymerase III (inferred); transcription initiation at RNA polymerase III promoter (inferred); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); Tracheoesophageal Fistula (ortholog); FOUND IN nucleolus (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

general transcription factor 3C polypeptide 1; general transcription factor IIIC subunit 1, transcript variant X1; general transcription factor IIIC subunit 1, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	123,027,266 - 123,091,372 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	11,124,243 - 11,189,562 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	11,125,126 - 11,189,400 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

neuronal ceroid lipofuscinosis (ISO)

Tracheoesophageal Fistula (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

5S class rRNA transcription by RNA polymerase III (IEA)

transcription initiation at RNA polymerase III promoter (IEA)

Cellular Component

nucleolus (IEA)

nucleoplasm (IEA)

nucleus (IEA)

ribonucleoprotein complex (IEA)

transcription factor TFIIIC complex (IEA)

Molecular Function

DNA binding (IEA)

protein binding (ISO)

RNA polymerase III general transcription initiation factor activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

RNA polymerase III transcription pathway (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Gtf3c1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	123,027,266 - 123,091,372 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	11,124,243 - 11,189,562 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	11,125,126 - 11,189,400 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GTF3C1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	27,460,613 - 27,549,913 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	27,459,555 - 27,549,913 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	27,471,934 - 27,561,234 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	27,379,436 - 27,468,752 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	27,379,569 - 27,468,775	NCBI
Celera	16	26,249,266 - 26,338,586 (-)	NCBI		Celera
Cytogenetic Map	16	p12.1	NCBI
HuRef	16	25,560,380 - 25,649,634 (-)	NCBI		HuRef
CHM1_1	16	28,483,652 - 28,572,971 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	27,739,371 - 27,828,673 (-)	NCBI		T2T-CHM13v2.0

Gtf3c1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	125,240,126 - 125,306,860 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	125,240,126 - 125,306,952 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	125,640,954 - 125,707,688 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	125,640,954 - 125,707,780 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	132,784,468 - 132,851,202 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	125,432,102 - 125,498,836 (-)	NCBI		MGSCv36	mm8
Celera	7	125,499,868 - 125,566,704 (-)	NCBI		Celera
Cytogenetic Map	7	F3	NCBI
cM Map	7	69.01	NCBI

Gtf3c1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	189,634,645 - 189,700,848 (-)	NCBI		GRCr8
mRatBN7.2	1	180,203,995 - 180,270,201 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	180,203,995 - 180,270,201 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	188,541,071 - 188,607,788 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	195,727,113 - 195,793,832 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	188,410,048 - 188,476,867 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	197,032,473 - 197,098,676 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	197,032,474 - 197,098,649 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	204,016,933 - 204,083,175 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	184,701,886 - 184,768,061 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	184,851,766 - 184,917,942 (-)	NCBI
Celera	1	177,873,349 - 177,939,574 (-)	NCBI		Celera
Cytogenetic Map	1	q36	NCBI

Gtf3c1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955493	5,651,841 - 5,724,426 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955493	5,651,841 - 5,724,426 (-)	NCBI	ChiLan1.0	ChiLan1.0

GTF3C1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	28,855,148 - 28,943,995 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	33,395,157 - 33,483,973 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	16	27,830,280 - 27,919,020 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	27,830,280 - 27,919,020 (-)	Ensembl	panpan1.1		panPan2

GTF3C1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	19,100,699 - 19,174,495 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	19,100,766 - 19,173,972 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	20,679,709 - 20,753,300 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	19,240,601 - 19,314,396 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	19,240,592 - 19,314,395 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	19,038,621 - 19,112,246 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	18,952,332 - 19,025,919 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	19,298,564 - 19,372,137 (+)	NCBI		UU_Cfam_GSD_1.0

GTF3C1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	19,368,394 - 19,439,630 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	19,368,359 - 19,439,642 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	19,601,820 - 19,672,866 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GTF3C1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	25,165,672 - 25,252,370 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	25,165,539 - 25,252,346 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	4,444,425 - 4,531,320 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gtf3c1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624782	12,074,781 - 12,141,315 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624782	12,073,895 - 12,141,397 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013357940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021725471	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010004404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000015020 ⟹ ENSSTOP00000013458

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936501	11,124,243 - 11,189,562 (-)	Ensembl

RefSeq Acc Id:

XM_013357940 ⟹ XP_013213394

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	123,027,266 - 123,091,371 (-)	NCBI
SpeTri2.0	NW_004936501	11,125,126 - 11,189,400 (-)	NCBI

Sequence:

show sequence

ACTGTTTGCAGTTCCCCTGGTTACTGCGGGGTTCCGGACCAATGGCGGCGGAGCTCCACTCACT
GAACCCGCCTCCGAGGGGGCGTGACGTCACGTCGGCGCGCTGGAACTCCTCCTCCAATCTCCCG
GTCCGACCCGCCTCCCGCGGATCGCTGTGCGCAGGCGCGCTGGACCAGGGGCCTCGGCGGCTGG
GTGCGCAGGCGCTCTGGGCGCCGCCGATTCAAGCAGCCATGGACGCGTTAGAGTCCTTGTTGGA
CGAAGTGGCCCTCGAGGGGCTGGATGGCTTGTGTCTGCCCGCGCTGTGGAGCCGTCTGGAATCC
CGAGTGCCTCCCTTCCCGCTGCCTTTGGAGCCCTACACGCAGGAGTTTCTGTGGCGGGCCCTGG
CCACGCACCCGGGCATCAGCTTCTACGAGGAGCCGCGGGAGCGACCCGACCTCCAGCTCCAGGA
CCGGTATGAAGAGATCGACCTGGAAACTGGGATTTTGGAGTCCAGGAGGGACCCAGTCCCCTTG
GAGGATGTCTACCCCATCCACATGATCTTGGAGAATAAAGATGGCATCCAGGGCTCATGCCGGT
ACTTTAAGGAAAGGAAAAACATCACCAACAGCATCAGGACTAAGTGTCTGCAGCCTCGGTGTAC
CATGGTGGAGGCCTTCGGCAGGTGGGGCAAGAAACTGATCATCGTCGCCTCCCAGGACATGCGC
TACAGGGCCCTGATCGGCGCAGAGGGGGACCCTGACCTGAAGCTCCCTGACTTCTCCTACTGCA
TTCTGGAGCGACTAGGCCGCTCCCGGTGGCAGGGGGAGCTGCAGCGAGACCTTCACAGCACCGC
TTTCAAGGTTGATGCTGGGAAGCTTCATTATCATAGGAAGATTCTGAATAAAAACGGGCTCATT
ACGATGCAGTCGCACGTGATCCGACTACCCACGGGAGCCCAGCAGCACTCGATCCTCCTCCTCC
TGAACCGGTTCCACGTGGACAGGAGGAGCAAGTACGACATCCTCATGGAGAAGCTCTCAATGAT
GCTGAGCACGCGGAGCAAGCAGATCGAGACGCTGGGCAAGCTGCGGGAGGAACTGGGGCTGTGC
GAGCGGACATTCAAGCGTCTCTACCAGTACATGCTGAACGCCGGGCTGGCCAAGGTGGTGTCCC
TTCCCCTACAGGACATTCACCCTGAGTGTGGCCCCTGTAAGACCAAGAAAGGGACCAACGTCAT
GGTTCGGTGCCTTAAACTGCTGAAGGAATTTAAGCGGAAGGTTGAAGATGACCATGATGACGAT
GACGACGAGGAGGCCATCTCCAAGGGGCTGCCCCCAGTGGACATCGTGTACGAGCGGGACATGC
TCACGCAGACCTACGAGCTCATTGAGCGCAGAGGCACCAAAGGCATTTCCCAGGCCGAGATCCG
AGTGGCCATGAACGTGGGAAAGCTGGAAGCCAGGATGCTCTGCCGCCTGCTCCAGAGGTTCAAG
GTCGTCAAGGGATTCATGGAAGACGAGGGCCGGCAGCGGACGACCAAGTACATCTCGTGCGTGT
TTGCGGAGGAGAGCGACCTGAGCCGGCAGTATGCCCGGGAGAAGGCCCGCAGCGAGCTGCTGAC
CACCGTGAGCCTGGCCTCGGTGCCCGAGGAGACACTCCTGCCCGAGGGCGAGGACGCCTTCCTC
TCCGAGTCGGACAGCGAGGAGGAGAGCAGCCGCAGCAGCAAGCGCAGGGGCAGGGCCTCCCAGG
GCCACCTGAGGTCCTCTGTGGACCTGGGACCAGGCACCCAGCCTCATCACTCCACGCCAACCAA
AGGTGGGTGGAAAGTCCTAAACCTACACCCGTTGAAGAAGCAGCCGTCTTCCTCCGCAGGAGCT
GCCGAGGACAGGGCCTGCAGGGGCCCCGCGGGCAGGGACAGCCTGCTGGACTCCAGCAGCAACT
CAGACCTCAACGTGTCCTTCGGCTCCCACTGCGTGGAGAGCAACAGCGGCGACATCGCCGTGAT
CGAGGAGGTCCGGCTGGACAACCCCAAGGAGGGCGGCGGTTCCCAGAGGGCCGGCAAGCACGGC
ACAGGCCAGGACAAGCCGCACAAGACGTACCGGCTCCTGAAGCGCAGGAACCTGATCATAGAGG
CCGTCACCAACCTCCGCCTCATCGAGAGCCTGTTCACGATACAGAAGATGATCATGGACCAGGA
GAAGCAGGAGGGCGTGGCCACCAAGTGCTGCAAGAAGTCCATCGTGCGCTTGGTGCGGAACCTG
TCGGAGGAGGGCCTCCTGAGGCTGTACCGCACCACGGTCATCCAGGACGGCATCAAGAAGAAGG
TGGACCTGGTGGTGCACCCGTCCATGGACCAGAACGACCCCCTCGTGAGGAGTGCCATCGAGCA
GGTGCGCTTCCGGATCTCCAACTCCAGCACCGCCAACAGGGTTAGAGTCCCCCAGCCTCCAGCC
CCTCCAGAGGAGGCCGAGGAAGAGAGCCCAGGAAAGGAGGGCCCACGCACATCCGGAGAGTCCG
ACCTGCCCACGGCCGCGAAGCCAGAGAGCACGCGGGTGAAGAAGACCGAGGAGAAGATGGGCAT
AACCCCGCTTAAAAACTACCACCCCGTCGTAGTTCCGGGCCTTGGGCGTTCCCTGGGGTTCCTG
CCCAAAATGCCCCGCCTGCGGATGGTCCACATGTTCCTGTGGTACCTGATCTACGGCCACCCTG
CCAGCCAAGCGGCCGAGCAGCCCGGCGTCGGCGGTGAGAGGAGAAAGCAGGAGCCAGGCAGGGC
AGGCCCGCGGCCCTCCTCTGGAAGCGACCTGGAGGCCTCTGAAGGCCCAGCCAAGGACAGCAAC
GAGAGCGCCCCCTGGGAGGCCGAAATGGAGCTTCCCACACAGACAGTGTACGTGGACGAGTGCT
CCTGGATGCGCCACATCCCTCCCATCCCAGTCCACAGGGACTTTGGCTTTGGCTGGGCGCTTGT
CAGTGACATCCTGCTCTGCCTGCCCCTGTCCATCTTCGTCCAGATCGTGCAAGTCAGCTACAAG
GTGGACAACCTTGAGGACTTCCTCAACGACCCTCTGAAGAAGCACACGCTGATCCGCTTCCTCC
CCAGGCCCATCCGGCAGCAGCTCCTGTACAAGAGGCGCTACATCTTCTCCGTGATCGAGAACCT
GCAGCGGCTGTGCTACATGGGGCTGCTGCAGTTCGGTCCCACGGAGAAGTTTCAGGACAAAGAC
CAGGTCTTCGTGTTCCTGAAGAAGAACGCGGTCATCATCGACACCACCATCTGCGACCCCCATT
ACAACCTGGCCCACAGCACCCGGCCCTTCGAGAGGCGGCTCTACGTCCTGAACTCCATGCAGGA
CGTGGAGAACTACTGGTTCGACCTGCAGTGCGTCTGCCTCAACACCCCGCTAGGTGTGGTGCGC
TGCCCGTGCGTCCAAAAGAACAGCCCAGACGCGGGCGGCGACAAGGAGGGCAGCCTACAGAAGG
AGCAGGAGAATGCCATCGACAGGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGTACACCAC
GGGCAGCCGGGAGGTGGTGGACGAGGGCCTGATCCCCGGAGACGGGCTGGGGGCCGCGGGGCTC
GACTCCAGCTTCTATGCCCACCTGAAGCGCAACTGGATCTGGACCAGCTACATCATCAACAAGG
CCAGAAAGGAGAACATCAACGCAGAGAACGGGCTCACCGTGAGGCTGCAGACCTTCCTGTCCAA
GCGCCCGCTGCCCCTCGGTGCCACAGGTGGTGGCCGGTTGGCTCTCTGGGGAGAAGCGCGGACA
GGCACCGAGCTGTGTGCCGACCGGGAGGAGCAGTTTGAGGTGGACCGTGAGCCCACGCTGGGCA
GAAGCCGCAGGGTCAGGGGCGGCCGAAGCCAGAAGCGGAAACGGCTGAAGAAGGAGCCTGGGAA
GAGAACCAAGAGGAGGAGGAAAGGAGAGGCCCCAGCAGAGAAAAGCAAGCGGCTGCGCTACCAC
GACGAGGCCGACCAGAGCGCCCTGCGCAGGATGACCCGGCTGCGCGTGTCCTGGTCCATGCAGG
AGGACGGGCTGCTCATGCTCTGCCGCATCGCCAGCAACGTGCTCAACGCCAAGGTGAAGGGCCC
GTTTGTCCCCTGGCAGGTCGTGCGGGACATCTTACACTCAACCTTTGAAGAGTCTTTGGACAAG
ACGTCGCACTCTGTCGGCCGCCGAGCTCGCTACATCGTCAGGAACCCCCAGGCCTACCTCAACT
ACAAGGTCTGCCTGGCCGAGGTGTACCAGGATAAAGCGCTCGTCGGGGACTTCATGAGTCGGAA
ATGTGACTATGAGGACCCTAAGGTTTGTGCCAAGGAGTTCAGGGAGTTTGTGGAGAAGCTCCAG
GAGAAGTTCAGCTCGGCCCTCAGGAACCCCGGCCTGGAGATCCCGGACACGCTGCGGGAGCTGT
TCGCCAGGTACCGAGTCTTGGCCATCGGCGATGAGAAGGACCAGATCAGGAAGGAAGACGAGCT
TAACAGCGTGGACGACATCCACTTCCTGGTGCTGCAGAACCTGATCCAGAGCACGCTGTCCCTC
TCCAACAGCCAGATGAAGTCCTGCCAGTCCTTCCAGACCTTCCGCCTGTACCGCGAGTACAAGG
AGCAGGTGCTGGTGCGGGCCTTCATGGAGTGCCAGAAGCGGAGCCTGGTCAACCGGCGGCGCGT
CAACCACACGCTCGGCCCCAAGAAGAACCGGGCGCTGCCCTTCGTGCCCATGTCCTACCAGCTG
TCCCAGTCCTACTACAGGCTCTTCACCTGGCGCTTCCCCAGCACCGTCTGCTCCGAGTCCTTCC
AGTTCTATGAGAGGTTGCGGGCGGCCGGCAAGCGGGACCAGCCCGACCACTTCTCCTTCAAAGA
CCAGGACAGCAGCGACCCCCCGAGTGACATGGTGGCATTTTCTTTGGACGGCCCTGGGGGACAC
TGTGTGACCGCCCTGATCCTCTTTTCCCTGGGCCTGGTGTCCGTGGACGTCAGGATCCCAGAGC
AGATCGTGGTGGTGGACAGCTCCGTGGTGGAGAGCGAGGTCATGAAGAGCCTGGGGAAGGATGG
GGGCTTGGATGACGACGAGGACGAGGAGGAAGACTTGGACGAGGGCTCGGGGGCCAAGCGCCAG
GGCGTGGAGGTGAAGGCCCACCAGGCCTCCCACACCAAGTACCTGCTCATGCGGGGCTACTGCG
CGCCCGGCCTCATCAGCACCCGCAACCTCAACCCCAACGACAGCGTCGTGGTCAACTCCTGCCA
GGTCAGGTTCCGGCTCCGCTGCACCCCTGCGGGCACCCGGCTGGCGCCCAGCGGCTTCACAGCG
GCTTCCCTGGAGGAGCTGACGGTGGGGACCTCCTGCCTCCCCGACACCTTCACCAGGCTCATCG
AGCCCCTGGGGCGCGCCGGCGGCTGGGAGGCCTTCGCCCACCAGGCGCAGCTGTCGGGGTACAG
CCCTGAAGACCTGGCCGCCGCCCTGGAGCTCCAGCAGGCTGTGGCCGCCACCGGCTGCTTTGGG
GTGGACAAGGAGAGGCTGAGCAGACAGTACTCGGCCCTGGAGAGGACGACAGGGCTGCGCACCA
GGACCTTGGCGGACTACATCCAGGACCTCCTGGAGCAGCGCCAGGTGCTGGAGGTGGGCGGCAA
CACCGTCCGCCTGGTGGCCAGGGCCTTGGCCGGGCCCTGGCTTCTGCACTCCGTGCGGCTGAGA
CACTCAGAGGAGGAGGCCCAGGCCCACGAGGACCATCAGGCCCGAGCCCCAGAGGGACCCGCCA
GCGAGGACAGTGCCCAGGAGGAGCTGGCCGCGCCCTCTTGCAGCCCCCAGGGCACCAAGAGGCG
AGCCCGCTGGGCCAGTCAGGGCAGCGACACAGACACCGAGGGTCCCCTGAAGTCTCCTGCAAAG
AGGCCCAGGCTCCAGGACGTGCGCCTGGCCGCCAGCCCCAGGCCCGGGGCAGAGGAGGGGGCAG
AAGGCCAGGCCCTGGCTTTGCCCCCAGCTCCTGAAGACACGGCTGCCGGGGGCCCTGGGCAGGA
GGACCAGGAAAGTGTCGGTGGCCCCAGCGTTCCAGGCCAAGAGCAGCCAAGCTGTCAGGCCCAG
CTCCCGGGGGGCTCTGAAGACCCCAGAGGGCTCTCGGAGACCTCCACGGCCAGCAGCCTCTCCC
AGGCGCCTCGGGAAAGGAACTGCGAGAACATCTGCTTCGTGGGCCGCCCGTGGCGCGGCGTGGA
CGGCCGCCTGAACACCGCCGTGTGCAAGGGCATGATGGAGGCCGTGCTGTACCACGTCATGAGC
CGCCCGGGCGCGCCCGAGAGCTGCCTGCTGCAGCACTACCAGGGCGTGCTGCAGCCCGTGGCCG
TGCTCGAGCTGCTGCAGGGCCTGGAGTCCCTTGGCTGCATCCGCAAGCGCCTGCTGAGGAAGCC
CAGGGCCGCCGCGCTCTTCTCCAGGCCCGTGGTGGAGGAGGTGGAGGCGCCCGACGAGCACACC
ACGGCCTTCTACGAGCCCACGCTGGACTGCACCATCCGCCTGGGCCGCGTGTTCCCCCGGGAGG
CCAACTGGAACCGCTGGGCCTCCCTCTAGGGCGCCGCCGCCGCCCACCACCGCCCTCGCCGCCT
CGGCCGCAGACCTCGCAGTCCTCGCGGCTCCAGCCAGGCCGGGTCCCCTCCCCAGGACTGGACT
TACCAGCTTGGGCCTGGAGTGGACCCCGCAGGCTCGGCGGGCACCTTGCCCCCAGCCCCCAGCC
TGCCATGGCCGGTGACTGCAGGATAGAGAGGAGGCCCCCGTAGGATTTGGCTTTGAATTTTTTC
TTTCAACCTCTTTTCTCATTTAGAAACAAGTCCCCCGGCATGAATTTATTTATTTTTTAATTAA
AGTGAAGTCAAATGTG

hide sequence

RefSeq Acc Id:

XM_021725471 ⟹ XP_021581146

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409344	123,027,573 - 123,091,372 (-)	NCBI
SpeTri2.0	NW_004936501	11,125,126 - 11,189,400 (-)	NCBI

Sequence:

show sequence

ACTGTTTGCAGTTCCCCTGGTTACTGCGGGGTTCCGGACCAATGGCGGCGGAGCTCCACTCACT
GAACCCGCCTCCGAGGGGGCGTGACGTCACGTCGGCGCGCTGGAACTCCTCCTCCAATCTCCCG
GTCCGACCCGCCTCCCGCGGATCGCTGTGCGCAGGCGCGCTGGACCAGGGGCCTCGGCGGCTGG
GTGCGCAGGCGCTCTGGGCGCCGCCGATTCAAGCAGCCATGGACGCGTTAGAGTCCTTGTTGGA
CGAAGTGGCCCTCGAGGGGCTGGATGGCTTGTGTCTGCCCGCGCTGTGGAGCCGTCTGGAATCC
CGAGTGCCTCCCTTCCCGCTGCCTTTGGAGCCCTACACGCAGGAGTTTCTGTGGCGGGCCCTGG
CCACGCACCCGGGCATCAGCTTCTACGAGGAGCCGCGGGAGCGACCCGACCTCCAGCTCCAGGA
CCGGTATGAAGAGATCGACCTGGAAACTGGGATTTTGGAGTCCAGGAGGGACCCAGTCCCCTTG
GAGGATGTCTACCCCATCCACATGATCTTGGAGAATAAAGATGGCATCCAGGGCTCATGCCGGT
ACTTTAAGGAAAGGAAAAACATCACCAACAGCATCAGGACTAAGTGTCTGCAGCCTCGGTGTAC
CATGGTGGAGGCCTTCGGCAGGTGGGGCAAGAAACTGATCATCGTCGCCTCCCAGGACATGCGC
TACAGGGCCCTGATCGGCGCAGAGGGGGACCCTGACCTGAAGCTCCCTGACTTCTCCTACTGCA
TTCTGGAGCGACTAGGCCGCTCCCGGTGGCAGGGGGAGCTGCAGCGAGACCTTCACAGCACCGC
TTTCAAGGTTGATGCTGGGAAGCTTCATTATCATAGGAAGATTCTGAATAAAAACGGGCTCATT
ACGATGCAGTCGCACGTGATCCGACTACCCACGGGAGCCCAGCAGCACTCGATCCTCCTCCTCC
TGAACCGGTTCCACGTGGACAGGAGGAGCAAGTACGACATCCTCATGGAGAAGCTCTCAATGAT
GCTGAGCACGCGGAGCAAGCAGATCGAGACGCTGGGCAAGCTGCGGGAGGAACTGGGGCTGTGC
GAGCGGACATTCAAGCGTCTCTACCAGTACATGCTGAACGCCGGGCTGGCCAAGGTGGTGTCCC
TTCCCCTACAGGACATTCACCCTGAGTGTGGCCCCTGTAAGACCAAGAAAGGGACCAACGTCAT
GGTTCGGTGCCTTAAACTGCTGAAGGAATTTAAGCGGAAGGTTGAAGATGACCATGATGACGAT
GACGACGAGGAGGCCATCTCCAAGGGGCTGCCCCCAGTGGACATCGTGTACGAGCGGGACATGC
TCACGCAGACCTACGAGCTCATTGAGCGCAGAGGCACCAAAGGCATTTCCCAGGCCGAGATCCG
AGTGGCCATGAACGTGGGAAAGCTGGAAGCCAGGATGCTCTGCCGCCTGCTCCAGAGGTTCAAG
GTCGTCAAGGGATTCATGGAAGACGAGGGCCGGCAGCGGACGACCAAGTACATCTCGTGCGTGT
TTGCGGAGGAGAGCGACCTGAGCCGGCAGTATGCCCGGGAGAAGGCCCGCAGCGAGCTGCTGAC
CACCGTGAGCCTGGCCTCGGTGCCCGAGGAGACACTCCTGCCCGAGGGCGAGGACGCCTTCCTC
TCCGAGTCGGACAGCGAGGAGGAGAGCAGCCGCAGCAGCAAGCGCAGGGGCAGGGCCTCCCAGG
GCCACCTGAGGTCCTCTGTGGACCTGGGACCAGGCACCCAGCCTCATCACTCCACGCCAACCAA
AGGAGCTGCCGAGGACAGGGCCTGCAGGGGCCCCGCGGGCAGGGACAGCCTGCTGGACTCCAGC
AGCAACTCAGACCTCAACGTGTCCTTCGGCTCCCACTGCGTGGAGAGCAACAGCGGCGACATCG
CCGTGATCGAGGAGGTCCGGCTGGACAACCCCAAGGAGGGCGGCGGTTCCCAGAGGGCCGGCAA
GCACGGCACAGGCCAGGACAAGCCGCACAAGACGTACCGGCTCCTGAAGCGCAGGAACCTGATC
ATAGAGGCCGTCACCAACCTCCGCCTCATCGAGAGCCTGTTCACGATACAGAAGATGATCATGG
ACCAGGAGAAGCAGGAGGGCGTGGCCACCAAGTGCTGCAAGAAGTCCATCGTGCGCTTGGTGCG
GAACCTGTCGGAGGAGGGCCTCCTGAGGCTGTACCGCACCACGGTCATCCAGGACGGCATCAAG
AAGAAGGTGGACCTGGTGGTGCACCCGTCCATGGACCAGAACGACCCCCTCGTGAGGAGTGCCA
TCGAGCAGGTGCGCTTCCGGATCTCCAACTCCAGCACCGCCAACAGGGTTAGAGTCCCCCAGCC
TCCAGCCCCTCCAGAGGAGGCCGAGGAAGAGAGCCCAGGAAAGGAGGGCCCACGCACATCCGGA
GAGTCCGACCTGCCCACGGCCGCGAAGCCAGAGAGCACGCGGGTGAAGAAGACCGAGGAGAAGA
TGGGCATAACCCCGCTTAAAAACTACCACCCCGTCGTAGTTCCGGGCCTTGGGCGTTCCCTGGG
GTTCCTGCCCAAAATGCCCCGCCTGCGGATGGTCCACATGTTCCTGTGGTACCTGATCTACGGC
CACCCTGCCAGCCAAGCGGCCGAGCAGCCCGGCGTCGGCGGTGAGAGGAGAAAGCAGGAGCCAG
GCAGGGCAGGCCCGCGGCCCTCCTCTGGAAGCGACCTGGAGGCCTCTGAAGGCCCAGCCAAGGA
CAGCAACGAGAGCGCCCCCTGGGAGGCCGAAATGGAGCTTCCCACACAGACAGTGTACGTGGAC
GAGTGCTCCTGGATGCGCCACATCCCTCCCATCCCAGTCCACAGGGACTTTGGCTTTGGCTGGG
CGCTTGTCAGTGACATCCTGCTCTGCCTGCCCCTGTCCATCTTCGTCCAGATCGTGCAAGTCAG
CTACAAGGTGGACAACCTTGAGGACTTCCTCAACGACCCTCTGAAGAAGCACACGCTGATCCGC
TTCCTCCCCAGGCCCATCCGGCAGCAGCTCCTGTACAAGAGGCGCTACATCTTCTCCGTGATCG
AGAACCTGCAGCGGCTGTGCTACATGGGGCTGCTGCAGTTCGGTCCCACGGAGAAGTTTCAGGA
CAAAGACCAGGTCTTCGTGTTCCTGAAGAAGAACGCGGTCATCATCGACACCACCATCTGCGAC
CCCCATTACAACCTGGCCCACAGCACCCGGCCCTTCGAGAGGCGGCTCTACGTCCTGAACTCCA
TGCAGGACGTGGAGAACTACTGGTTCGACCTGCAGTGCGTCTGCCTCAACACCCCGCTAGGTGT
GGTGCGCTGCCCGTGCGTCCAAAAGAACAGCCCAGACGCGGGCGGCGACAAGGAGGGCAGCCTA
CAGAAGGAGCAGGAGAATGCCATCGACAGGCACAACCTGGAGCGCAAGTGCGCCATGCTGGAGT
ACACCACGGGCAGCCGGGAGGTGGTGGACGAGGGCCTGATCCCCGGAGACGGGCTGGGGGCCGC
GGGGCTCGACTCCAGCTTCTATGCCCACCTGAAGCGCAACTGGATCTGGACCAGCTACATCATC
AACAAGGCCAGAAAGGAGAACATCAACGCAGAGAACGGGCTCACCGTGAGGCTGCAGACCTTCC
TGTCCAAGCGCCCGCTGCCCCTCGGTGCCACAGGTGGTGGCCGGTTGGCTCTCTGGGGAGAAGC
GCGGACAGGCACCGAGCTGTGTGCCGACCGGGAGGAGCAGTTTGAGGTGGACCGTGAGCCCACG
CTGGGCAGAAGCCGCAGGGTCAGGGGCGGCCGAAGCCAGAAGCGGAAACGGCTGAAGAAGGAGC
CTGGGAAGAGAACCAAGAGGAGGAGGAAAGGAGAGGCCCCAGCAGAGAAAAGCAAGCGGCTGCG
CTACCACGACGAGGCCGACCAGAGCGCCCTGCGCAGGATGACCCGGCTGCGCGTGTCCTGGTCC
ATGCAGGAGGACGGGCTGCTCATGCTCTGCCGCATCGCCAGCAACGTGCTCAACGCCAAGGTGA
AGGGCCCGTTTGTCCCCTGGCAGGTCGTGCGGGACATCTTACACTCAACCTTTGAAGAGTCTTT
GGACAAGACGTCGCACTCTGTCGGCCGCCGAGCTCGCTACATCGTCAGGAACCCCCAGGCCTAC
CTCAACTACAAGGTCTGCCTGGCCGAGGTGTACCAGGATAAAGCGCTCGTCGGGGACTTCATGA
GTCGGAAATGTGACTATGAGGACCCTAAGGTTTGTGCCAAGGAGTTCAGGGAGTTTGTGGAGAA
GCTCCAGGAGAAGTTCAGCTCGGCCCTCAGGAACCCCGGCCTGGAGATCCCGGACACGCTGCGG
GAGCTGTTCGCCAGGTACCGAGTCTTGGCCATCGGCGATGAGAAGGACCAGATCAGGAAGGAAG
ACGAGCTTAACAGCGTGGACGACATCCACTTCCTGGTGCTGCAGAACCTGATCCAGAGCACGCT
GTCCCTCTCCAACAGCCAGATGAAGTCCTGCCAGTCCTTCCAGACCTTCCGCCTGTACCGCGAG
TACAAGGAGCAGGTGCTGGTGCGGGCCTTCATGGAGTGCCAGAAGCGGAGCCTGGTCAACCGGC
GGCGCGTCAACCACACGCTCGGCCCCAAGAAGAACCGGGCGCTGCCCTTCGTGCCCATGTCCTA
CCAGCTGTCCCAGTCCTACTACAGGCTCTTCACCTGGCGCTTCCCCAGCACCGTCTGCTCCGAG
TCCTTCCAGTTCTATGAGAGGTTGCGGGCGGCCGGCAAGCGGGACCAGCCCGACCACTTCTCCT
TCAAAGACCAGGACAGCAGCGACCCCCCGAGTGACATGGTGGCATTTTCTTTGGACGGCCCTGG
GGGACACTGTGTGACCGCCCTGATCCTCTTTTCCCTGGGCCTGGTGTCCGTGGACGTCAGGATC
CCAGAGCAGATCGTGGTGGTGGACAGCTCCGTGGTGGAGAGCGAGGTCATGAAGAGCCTGGGGA
AGGATGGGGGCTTGGATGACGACGAGGACGAGGAGGAAGACTTGGACGAGGGCTCGGGGGCCAA
GCGCCAGGGCGTGGAGGTGAAGGCCCACCAGGCCTCCCACACCAAGTACCTGCTCATGCGGGGC
TACTGCGCGCCCGGCCTCATCAGCACCCGCAACCTCAACCCCAACGACAGCGTCGTGGTCAACT
CCTGCCAGGTCAGGTTCCGGCTCCGCTGCACCCCTGCGGGCACCCGGCTGGCGCCCAGCGGCTT
CACAGCGGCTTCCCTGGAGGAGCTGACGGTGGGGACCTCCTGCCTCCCCGACACCTTCACCAGG
CTCATCGAGCCCCTGGGGCGCGCCGGCGGCTGGGAGGCCTTCGCCCACCAGGCGCAGCTGTCGG
GGTACAGCCCTGAAGACCTGGCCGCCGCCCTGGAGCTCCAGCAGGCTGTGGCCGCCACCGGCTG
CTTTGGGGTGGACAAGGAGAGGCTGAGCAGACAGTACTCGGCCCTGGAGAGGACGACAGGGCTG
CGCACCAGGACCTTGGCGGACTACATCCAGGACCTCCTGGAGCAGCGCCAGGTGCTGGAGGTGG
GCGGCAACACCGTCCGCCTGGTGGCCAGGGCCTTGGCCGGGCCCTGGCTTCTGCACTCCGTGCG
GCTGAGACACTCAGAGGAGGAGGCCCAGGCCCACGAGGACCATCAGGCCCGAGCCCCAGAGGGA
CCCGCCAGCGAGGACAGTGCCCAGGAGGAGCTGGCCGCGCCCTCTTGCAGCCCCCAGGGCACCA
AGAGGCGAGCCCGCTGGGCCAGTCAGGGCAGCGACACAGACACCGAGGGTCCCCTGAAGTCTCC
TGCAAAGAGGCCCAGGCTCCAGGACGTGCGCCTGGCCGCCAGCCCCAGGCCCGGGGCAGAGGAG
GGGGCAGAAGGCCAGGCCCTGGCTTTGCCCCCAGCTCCTGAAGACACGGCTGCCGGGGGCCCTG
GGCAGGAGGACCAGGAAAGTGTCGGTGGCCCCAGCGTTCCAGGCCAAGAGCAGCCAAGCTGTCA
GGCCCAGCTCCCGGGGGGCTCTGAAGACCCCAGAGGGCTCTCGGAGACCTCCACGGCCAGCAGC
CTCTCCCAGGCGCCTCGGGAAAGGAACTGCGAGAACATCTGCTTCGTGGGCCGCCCGTGGCGCG
GCGTGGACGGCCGCCTGAACACCGCCGTGTGCAAGGGCATGATGGAGGCCGTGCTGTACCACGT
CATGAGCCGCCCGGGCGCGCCCGAGAGCTGCCTGCTGCAGCACTACCAGGGCGTGCTGCAGCCC
GTGGCCGTGCTCGAGCTGCTGCAGGGCCTGGAGTCCCTTGGCTGCATCCGCAAGCGCCTGCTGA
GGAAGCCCAGGGCCGCCGCGCTCTTCTCCAGGCCCGTGGTGGAGGAGGTGGAGGCGCCCGACGA
GCACACCACGGCCTTCTACGAGCCCACGCTGGACTGCACCATCCGCCTGGGCCGCGTGTTCCCC
CGGGAGGCCAACTGGAACCGCTGGGCCTCCCTCTAGGGCGCCGCCGCCGCCCACCACCGCCCTC
GCCGCCTCGGCCGCAGACCTCGCAGTCCTCGCGGCTCCAGCCAGGCCGGGTCCCCTCCCCAGGA
CTGGACTTACCAGCTTGGGCCTGGAGTGGACCCCGCAGGCTCGGCGGGCACCTTGCCCCCAGCC
CCCAGCCTGCCATGGCCGGTGACTGCAGGATAGAGAGGAGGCCCCCGTAGGATTTGGCTTTGAA
TTTTTTCTTTCAACCTCTTTTCTCATTTAGAAACAAGTCCCCCGGCATGAATTTATTTATTTTT
TAATTAAAGTGAAGTCAAATGTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_013213394	(Get FASTA)	NCBI Sequence Viewer
	XP_021581146	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000013458.3
GenBank Protein	KAG3259541	(Get FASTA)	NCBI Sequence Viewer
	KAG3259542	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_013213394 ⟸ XM_013357940
- Peptide Label:	isoform X1
- UniProtKB:	I3MP05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAELHSLNPPPRGRDVTSARWNSSSNLPVRPASRGSLCAGALDQGPRRLGAQALWAPPIQAAM DALESLLDEVALEGLDGLCLPALWSRLESRVPPFPLPLEPYTQEFLWRALATHPGISFYEEPRE RPDLQLQDRYEEIDLETGILESRRDPVPLEDVYPIHMILENKDGIQGSCRYFKERKNITNSIRT KCLQPRCTMVEAFGRWGKKLIIVASQDMRYRALIGAEGDPDLKLPDFSYCILERLGRSRWQGEL QRDLHSTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSILLLLNRFHVDRRSKYDI LMEKLSMMLSTRSKQIETLGKLREELGLCERTFKRLYQYMLNAGLAKVVSLPLQDIHPECGPCK TKKGTNVMVRCLKLLKEFKRKVEDDHDDDDDEEAISKGLPPVDIVYERDMLTQTYELIERRGTK GISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDEGRQRTTKYISCVFAEESDLSRQYARE KARSELLTTVSLASVPEETLLPEGEDAFLSESDSEEESSRSSKRRGRASQGHLRSSVDLGPGTQ PHHSTPTKGGWKVLNLHPLKKQPSSSAGAAEDRACRGPAGRDSLLDSSSNSDLNVSFGSHCVES NSGDIAVIEEVRLDNPKEGGGSQRAGKHGTGQDKPHKTYRLLKRRNLIIEAVTNLRLIESLFTI QKMIMDQEKQEGVATKCCKKSIVRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQNDP LVRSAIEQVRFRISNSSTANRVRVPQPPAPPEEAEEESPGKEGPRTSGESDLPTAAKPESTRVK KTEEKMGITPLKNYHPVVVPGLGRSLGFLPKMPRLRMVHMFLWYLIYGHPASQAAEQPGVGGER RKQEPGRAGPRPSSGSDLEASEGPAKDSNESAPWEAEMELPTQTVYVDECSWMRHIPPIPVHRD FGFGWALVSDILLCLPLSIFVQIVQVSYKVDNLEDFLNDPLKKHTLIRFLPRPIRQQLLYKRRY IFSVIENLQRLCYMGLLQFGPTEKFQDKDQVFVFLKKNAVIIDTTICDPHYNLAHSTRPFERRL YVLNSMQDVENYWFDLQCVCLNTPLGVVRCPCVQKNSPDAGGDKEGSLQKEQENAIDRHNLERK CAMLEYTTGSREVVDEGLIPGDGLGAAGLDSSFYAHLKRNWIWTSYIINKARKENINAENGLTV RLQTFLSKRPLPLGATGGGRLALWGEARTGTELCADREEQFEVDREPTLGRSRRVRGGRSQKRK RLKKEPGKRTKRRRKGEAPAEKSKRLRYHDEADQSALRRMTRLRVSWSMQEDGLLMLCRIASNV LNAKVKGPFVPWQVVRDILHSTFEESLDKTSHSVGRRARYIVRNPQAYLNYKVCLAEVYQDKAL VGDFMSRKCDYEDPKVCAKEFREFVEKLQEKFSSALRNPGLEIPDTLRELFARYRVLAIGDEKD QIRKEDELNSVDDIHFLVLQNLIQSTLSLSNSQMKSCQSFQTFRLYREYKEQVLVRAFMECQKR SLVNRRRVNHTLGPKKNRALPFVPMSYQLSQSYYRLFTWRFPSTVCSESFQFYERLRAAGKRDQ PDHFSFKDQDSSDPPSDMVAFSLDGPGGHCVTALILFSLGLVSVDVRIPEQIVVVDSSVVESEV MKSLGKDGGLDDDEDEEEDLDEGSGAKRQGVEVKAHQASHTKYLLMRGYCAPGLISTRNLNPND SVVVNSCQVRFRLRCTPAGTRLAPSGFTAASLEELTVGTSCLPDTFTRLIEPLGRAGGWEAFAH QAQLSGYSPEDLAAALELQQAVAATGCFGVDKERLSRQYSALERTTGLRTRTLADYIQDLLEQR QVLEVGGNTVRLVARALAGPWLLHSVRLRHSEEEAQAHEDHQARAPEGPASEDSAQEELAAPSC SPQGTKRRARWASQGSDTDTEGPLKSPAKRPRLQDVRLAASPRPGAEEGAEGQALALPPAPEDT AAGGPGQEDQESVGGPSVPGQEQPSCQAQLPGGSEDPRGLSETSTASSLSQAPRERNCENICFV GRPWRGVDGRLNTAVCKGMMEAVLYHVMSRPGAPESCLLQHYQGVLQPVAVLELLQGLESLGCI RKRLLRKPRAAALFSRPVVEEVEAPDEHTTAFYEPTLDCTIRLGRVFPREANWNRWASL hide sequence

RefSeq Acc Id:	XP_021581146 ⟸ XM_021725471
- Peptide Label:	isoform X2
- UniProtKB:	I3MP05 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAELHSLNPPPRGRDVTSARWNSSSNLPVRPASRGSLCAGALDQGPRRLGAQALWAPPIQAAM DALESLLDEVALEGLDGLCLPALWSRLESRVPPFPLPLEPYTQEFLWRALATHPGISFYEEPRE RPDLQLQDRYEEIDLETGILESRRDPVPLEDVYPIHMILENKDGIQGSCRYFKERKNITNSIRT KCLQPRCTMVEAFGRWGKKLIIVASQDMRYRALIGAEGDPDLKLPDFSYCILERLGRSRWQGEL QRDLHSTAFKVDAGKLHYHRKILNKNGLITMQSHVIRLPTGAQQHSILLLLNRFHVDRRSKYDI LMEKLSMMLSTRSKQIETLGKLREELGLCERTFKRLYQYMLNAGLAKVVSLPLQDIHPECGPCK TKKGTNVMVRCLKLLKEFKRKVEDDHDDDDDEEAISKGLPPVDIVYERDMLTQTYELIERRGTK GISQAEIRVAMNVGKLEARMLCRLLQRFKVVKGFMEDEGRQRTTKYISCVFAEESDLSRQYARE KARSELLTTVSLASVPEETLLPEGEDAFLSESDSEEESSRSSKRRGRASQGHLRSSVDLGPGTQ PHHSTPTKGAAEDRACRGPAGRDSLLDSSSNSDLNVSFGSHCVESNSGDIAVIEEVRLDNPKEG GGSQRAGKHGTGQDKPHKTYRLLKRRNLIIEAVTNLRLIESLFTIQKMIMDQEKQEGVATKCCK KSIVRLVRNLSEEGLLRLYRTTVIQDGIKKKVDLVVHPSMDQNDPLVRSAIEQVRFRISNSSTA NRVRVPQPPAPPEEAEEESPGKEGPRTSGESDLPTAAKPESTRVKKTEEKMGITPLKNYHPVVV PGLGRSLGFLPKMPRLRMVHMFLWYLIYGHPASQAAEQPGVGGERRKQEPGRAGPRPSSGSDLE ASEGPAKDSNESAPWEAEMELPTQTVYVDECSWMRHIPPIPVHRDFGFGWALVSDILLCLPLSI FVQIVQVSYKVDNLEDFLNDPLKKHTLIRFLPRPIRQQLLYKRRYIFSVIENLQRLCYMGLLQF GPTEKFQDKDQVFVFLKKNAVIIDTTICDPHYNLAHSTRPFERRLYVLNSMQDVENYWFDLQCV CLNTPLGVVRCPCVQKNSPDAGGDKEGSLQKEQENAIDRHNLERKCAMLEYTTGSREVVDEGLI PGDGLGAAGLDSSFYAHLKRNWIWTSYIINKARKENINAENGLTVRLQTFLSKRPLPLGATGGG RLALWGEARTGTELCADREEQFEVDREPTLGRSRRVRGGRSQKRKRLKKEPGKRTKRRRKGEAP AEKSKRLRYHDEADQSALRRMTRLRVSWSMQEDGLLMLCRIASNVLNAKVKGPFVPWQVVRDIL HSTFEESLDKTSHSVGRRARYIVRNPQAYLNYKVCLAEVYQDKALVGDFMSRKCDYEDPKVCAK EFREFVEKLQEKFSSALRNPGLEIPDTLRELFARYRVLAIGDEKDQIRKEDELNSVDDIHFLVL QNLIQSTLSLSNSQMKSCQSFQTFRLYREYKEQVLVRAFMECQKRSLVNRRRVNHTLGPKKNRA LPFVPMSYQLSQSYYRLFTWRFPSTVCSESFQFYERLRAAGKRDQPDHFSFKDQDSSDPPSDMV AFSLDGPGGHCVTALILFSLGLVSVDVRIPEQIVVVDSSVVESEVMKSLGKDGGLDDDEDEEED LDEGSGAKRQGVEVKAHQASHTKYLLMRGYCAPGLISTRNLNPNDSVVVNSCQVRFRLRCTPAG TRLAPSGFTAASLEELTVGTSCLPDTFTRLIEPLGRAGGWEAFAHQAQLSGYSPEDLAAALELQ QAVAATGCFGVDKERLSRQYSALERTTGLRTRTLADYIQDLLEQRQVLEVGGNTVRLVARALAG PWLLHSVRLRHSEEEAQAHEDHQARAPEGPASEDSAQEELAAPSCSPQGTKRRARWASQGSDTD TEGPLKSPAKRPRLQDVRLAASPRPGAEEGAEGQALALPPAPEDTAAGGPGQEDQESVGGPSVP GQEQPSCQAQLPGGSEDPRGLSETSTASSLSQAPRERNCENICFVGRPWRGVDGRLNTAVCKGM MEAVLYHVMSRPGAPESCLLQHYQGVLQPVAVLELLQGLESLGCIRKRLLRKPRAAALFSRPVV EEVEAPDEHTTAFYEPTLDCTIRLGRVFPREANWNRWASL hide sequence

Ensembl Acc Id:

ENSSTOP00000013458 ⟸ ENSSTOT00000015020

Protein Domains

B-block binding subunit of TFIIIC

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000014996	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000015020.3	UniProtKB/TrEMBL
InterPro	Tfc3-like	UniProtKB/TrEMBL
	Tfc3_eWH	UniProtKB/TrEMBL
	TFIIIC_Bblock-bd	UniProtKB/TrEMBL
NCBI Gene	Gtf3c1	ENTREZGENE
PANTHER	GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1	UniProtKB/TrEMBL
	PTHR15180	UniProtKB/TrEMBL
Pfam	B-block_TFIIIC	UniProtKB/TrEMBL
UniProt	I3MP05	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

RGD Manual Annotations