Bbox1 (gamma-butyrobetaine hydroxylase 1)

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Gene: Bbox1 (gamma-butyrobetaine hydroxylase 1) Ictidomys tridecemlineatus

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Symbol:

Bbox1

Name:

gamma-butyrobetaine hydroxylase 1

RGD ID:

12627844

Description:

ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (inferred); dioxygenase activity (inferred); gamma-butyrobetaine dioxygenase activity (inferred); INVOLVED IN carnitine biosynthetic process (inferred); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase 1, transcript variant X1; gamma-butyrobetaine hydroxylase 1, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	36,893,678 - 36,958,956 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936540	6,048,472 - 6,153,731 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936540	6,048,481 - 6,113,627 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carnitine biosynthetic process (IEA)

Cellular Component

cytosol (IEA,ISO)

mitochondrion (IEA)

Molecular Function

2-oxoglutarate-dependent dioxygenase activity (IEA)

dioxygenase activity (IEA)

gamma-butyrobetaine dioxygenase activity (IEA)

identical protein binding (IEA)

iron ion binding (IEA)

metal ion binding (IEA)

oxidoreductase activity (IEA)

protein binding (ISO)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

carnitine biosynthetic pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Bbox1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	36,893,678 - 36,958,956 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936540	6,048,472 - 6,153,731 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936540	6,048,481 - 6,113,627 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

BBOX1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	27,040,815 - 27,127,809 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	27,040,725 - 27,127,809 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	27,062,362 - 27,149,356 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	27,019,085 - 27,105,930 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	27,019,573 - 27,105,930	NCBI
Celera	11	27,207,166 - 27,294,016 (+)	NCBI		Celera
Cytogenetic Map	11	p14.2	NCBI
HuRef	11	26,759,908 - 26,847,062 (+)	NCBI		HuRef
CHM1_1	11	27,061,931 - 27,148,767 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	27,181,297 - 27,268,300 (+)	NCBI		T2T-CHM13v2.0

Bbox1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	110,094,401 - 110,145,158 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	110,093,042 - 110,144,905 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	110,264,056 - 110,314,813 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	110,262,697 - 110,314,560 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	110,105,240 - 110,145,882 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	110,065,922 - 110,106,564 (-)	NCBI		MGSCv36	mm8
Celera	2	111,425,130 - 111,465,702 (-)	NCBI		Celera
Cytogenetic Map	2	E3	NCBI
cM Map	2	56.7	NCBI

Bbox1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	117,277,226 - 117,326,383 (-)	NCBI		GRCr8
mRatBN7.2	3	96,822,654 - 96,871,786 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	96,822,655 - 96,871,458 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	100,395,476 - 100,434,388 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	108,994,430 - 109,033,342 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	106,746,656 - 106,785,585 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	101,425,684 - 101,474,848 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	101,427,055 - 101,474,890 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	108,023,621 - 108,070,883 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	95,747,735 - 95,786,852 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	95,644,162 - 95,683,280 (-)	NCBI
Celera	3	95,835,564 - 95,874,303 (-)	NCBI		Celera
Cytogenetic Map	3	q34	NCBI

Bbox1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955476	6,368,842 - 6,433,797 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955476	6,368,842 - 6,433,797 (+)	NCBI	ChiLan1.0	ChiLan1.0

BBOX1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	29,241,406 - 29,330,010 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	29,241,841 - 29,330,440 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	26,995,120 - 27,083,832 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	26,898,529 - 26,986,705 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	26,898,529 - 26,986,705 (+)	Ensembl	panpan1.1		panPan2

BBOX1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	47,707,648 - 47,766,732 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	47,706,717 - 47,766,503 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	47,198,477 - 47,257,514 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	48,848,545 - 48,906,661 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	48,847,346 - 48,906,642 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	47,834,272 - 47,892,256 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	48,002,172 - 48,061,307 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	48,588,367 - 48,647,500 (+)	NCBI		UU_Cfam_GSD_1.0

BBOX1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	33,227,974 - 33,296,559 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	33,227,965 - 33,296,013 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	35,864,213 - 35,883,328 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

BBOX1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	37,970,238 - 38,063,854 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	37,967,283 - 38,062,244 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	135,283,933 - 135,376,803 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Bbox1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	16,903,323 - 16,957,584 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	16,903,327 - 16,962,176 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013359859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040284586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040284587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040284588	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000015032 ⟹ ENSSTOP00000013469

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936540	6,048,472 - 6,113,627 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000032873 ⟹ ENSSTOP00000032466

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936540	6,048,472 - 6,153,731 (-)	Ensembl

RefSeq Acc Id:

XM_013359859 ⟹ XP_013215313

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	36,893,678 - 36,958,956 (-)	NCBI
SpeTri2.0	NW_004936540	6,048,481 - 6,113,627 (-)	NCBI

Sequence:

show sequence

GAATAGTCCATGAGCAAGTAGATGCCACCTCATTCTACTCAGGTTCCCTTCAGGAGTTGCTACA
CCTTCAGATTGAGACATCCTTCCTCATTTGCAAATCTCAGCTGTGTCTGGGGGCAGGGCTGCTG
AAGAGCTAGCTGCCAAGAGCAGACAGGCTTCCAAGGACAAGTCCCACATCAGACTGGAAACTGG
GGGTAGTCCGTCCTGGTGTGAAGGGCACTGGAAGGCTCCCTCTCCAAAGGACACCTAGGAGCAA
AGCTGACATTTTCTTTACTTGGGTTTACCCTCAAACACCAGAAACATGCATTGTGCCATCCAAA
AGGCAGAAGCACTGGATGGGAATCACTTGATGCAAATCCTCTGGAATGATGGGACAGAGTCTCT
CTACCCAGCTGTATGGCTGCGAGACAACTGCCAGTGCTCCGATTGCTACCTGGATTCTGCAAAA
GCACGGAAACTTCTCCTGGAAACCCTTGATGTGAACATTGGTATTAAAGACCTGGAGTTTGACA
AAAAGAAGGTGAATATCACATGGCCGAATGAGCATTGCAGTGAATTTGAAGCTGATTGGCTGAA
GAAAAGATGTTTTTCCCGGAAGGCCAGAGCAAAACTTCAGGAAGAATTGTTTTTGCCAGAACGT
CAATACTGGGGTTCAGAGCTCCAGCTACCTACTCTAAGTTTTGAAGATGTTTTAAAAAATGATG
AACATGCATACAAGTGGCTCTCCAGCCTCAAGAAAGTAGGCATTGTGCGACTCACCGGAGCATC
TAACAAGCGAGGAGAAGTAACAAAACTTGGGAAAAGGATTGGTTTCCTCTATCTCACATTTTAT
GGACATACTTGGCAAGTGCAAGACAAAATTGATGCAAACAATGTGGCTTACACAACTGGGAAGC
TAAGCTTTCACACGGATTATCCAGCCCTCCACCATCCACCTGGGGTTCAGCTTCTGCACTGCAT
AAAACAAACAGTCACAGGGGGTGATTCAGAAATTGTAGATGGGTTTAATGTGTGCCAAAAGCTT
AAGGAAAAAAATCCTCGAGCATTCCAGATTTTGTCTTCCACCTTTGTGGACTTTACAGACATTG
GAGTGGATTACTGTGATTTCTCTGTACAATCTAAACACAAAATTATAGAGTTAGATGACAAAGG
CCAAGTGGTTCGCATCAACTTCAACAATGCAACTAGAGACACGATATTTGATGTACCTGTTGAG
AGAGTTCAACCTTTTTATGCTGCTCTAAAAGAGTTTGTTGATCTCATGAACAGCAAAGAAAACA
AGTTCATCTTCAAGATGAATCCAGGTGATGTGATTACTTTTGATAATTGGCGCTTACTTCACGG
CCGACGAGGCTATGAAGCAGGAACTGAGATAACCCGCCATCTGGAGGGAGCCTATGCTGATTGG
GATGTGGTGATGTCAAGGCTTCGCATCTTAAGGCAGGGCGTTGCTAATGGGAACTGAATCTTGT
GTCTCTAATTTTAATAAGATTTCAGTGACTGCATTTATAAGATATGTCACGGTTATTCAAAAGA
TCACAATCTGTATGGTTCACATATCAATTTAGCACTGAACATGTAACTCCCTCACAACAATACA
CTGTTGCTTGTAATTCTACTCAATGTCAGCCTTTTCAATGGTGTAGCAATATAACCTCTTCTCC
AAATAAATCAT

hide sequence

RefSeq Acc Id:

XM_013359860 ⟹ XP_013215314

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	36,893,678 - 36,958,956 (-)	NCBI
SpeTri2.0	NW_004936540	6,048,481 - 6,113,627 (-)	NCBI

Sequence:

show sequence

GAATAGTCCATGAGCAAGTAGATGCCACCTCATTCTACTCAGGTTCCCTTCAGGAGTTGCTACA
CCTTCAGATTGAGACATCCTTCCTCATTTGCAAATCTCAGCTGTGTCTGGGGGCAGGGCTGCTG
AAGAGCTAGCTGCCAAGAGCAGACAGGCTTCCAAGGACAAGTCCCACATCAGACTGGAAACTGG
GGGTAGTCCGTCCTGGTGTGAAGGGCACTGGAAGGCTCCCTCTCCAAAGGACACCTAGGAGCAA
AGCTGACATTTTCTTTACTTGAAACATGCATTGTGCCATCCAAAAGGCAGAAGCACTGGATGGG
AATCACTTGATGCAAATCCTCTGGAATGATGGGACAGAGTCTCTCTACCCAGCTGTATGGCTGC
GAGACAACTGCCAGTGCTCCGATTGCTACCTGGATTCTGCAAAAGCACGGAAACTTCTCCTGGA
AACCCTTGATGTGAACATTGGTATTAAAGACCTGGAGTTTGACAAAAAGAAGGTGAATATCACA
TGGCCGAATGAGCATTGCAGTGAATTTGAAGCTGATTGGCTGAAGAAAAGATGTTTTTCCCGGA
AGGCCAGAGCAAAACTTCAGGAAGAATTGTTTTTGCCAGAACGTCAATACTGGGGTTCAGAGCT
CCAGCTACCTACTCTAAGTTTTGAAGATGTTTTAAAAAATGATGAACATGCATACAAGTGGCTC
TCCAGCCTCAAGAAAGTAGGCATTGTGCGACTCACCGGAGCATCTAACAAGCGAGGAGAAGTAA
CAAAACTTGGGAAAAGGATTGGTTTCCTCTATCTCACATTTTATGGACATACTTGGCAAGTGCA
AGACAAAATTGATGCAAACAATGTGGCTTACACAACTGGGAAGCTAAGCTTTCACACGGATTAT
CCAGCCCTCCACCATCCACCTGGGGTTCAGCTTCTGCACTGCATAAAACAAACAGTCACAGGGG
GTGATTCAGAAATTGTAGATGGGTTTAATGTGTGCCAAAAGCTTAAGGAAAAAAATCCTCGAGC
ATTCCAGATTTTGTCTTCCACCTTTGTGGACTTTACAGACATTGGAGTGGATTACTGTGATTTC
TCTGTACAATCTAAACACAAAATTATAGAGTTAGATGACAAAGGCCAAGTGGTTCGCATCAACT
TCAACAATGCAACTAGAGACACGATATTTGATGTACCTGTTGAGAGAGTTCAACCTTTTTATGC
TGCTCTAAAAGAGTTTGTTGATCTCATGAACAGCAAAGAAAACAAGTTCATCTTCAAGATGAAT
CCAGGTGATGTGATTACTTTTGATAATTGGCGCTTACTTCACGGCCGACGAGGCTATGAAGCAG
GAACTGAGATAACCCGCCATCTGGAGGGAGCCTATGCTGATTGGGATGTGGTGATGTCAAGGCT
TCGCATCTTAAGGCAGGGCGTTGCTAATGGGAACTGAATCTTGTGTCTCTAATTTTAATAAGAT
TTCAGTGACTGCATTTATAAGATATGTCACGGTTATTCAAAAGATCACAATCTGTATGGTTCAC
ATATCAATTTAGCACTGAACATGTAACTCCCTCACAACAATACACTGTTGCTTGTAATTCTACT
CAATGTCAGCCTTTTCAATGGTGTAGCAATATAACCTCTTCTCCAAATAAATCAT

hide sequence

RefSeq Acc Id:

XM_040284586 ⟹ XP_040140520

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	36,893,678 - 36,958,956 (-)	NCBI

RefSeq Acc Id:

XM_040284587 ⟹ XP_040140521

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	36,893,678 - 36,958,956 (-)	NCBI

RefSeq Acc Id:

XM_040284588 ⟹ XP_040140522

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	36,893,678 - 36,958,956 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013215313	(Get FASTA)	NCBI Sequence Viewer
	XP_013215314	(Get FASTA)	NCBI Sequence Viewer
	XP_040140520	(Get FASTA)	NCBI Sequence Viewer
	XP_040140521	(Get FASTA)	NCBI Sequence Viewer
	XP_040140522	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000013469.3
	ENSSTOP00000032466.1
GenBank Protein	KAG3285566	(Get FASTA)	NCBI Sequence Viewer
	KAG3285567	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013215314 ⟸ XM_013359860

- UniProtKB:

I3MP16 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MHCAIQKAEALDGNHLMQILWNDGTESLYPAVWLRDNCQCSDCYLDSAKARKLLLETLDVNIGI
KDLEFDKKKVNITWPNEHCSEFEADWLKKRCFSRKARAKLQEELFLPERQYWGSELQLPTLSFE
DVLKNDEHAYKWLSSLKKVGIVRLTGASNKRGEVTKLGKRIGFLYLTFYGHTWQVQDKIDANNV
AYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQKLKEKNPRAFQILSSTF
VDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIFDVPVERVQPFYAALKEFVDL
MNSKENKFIFKMNPGDVITFDNWRLLHGRRGYEAGTEITRHLEGAYADWDVVMSRLRILRQGVA
NGN

hide sequence

RefSeq Acc Id:

XP_013215313 ⟸ XM_013359859

- UniProtKB:

I3MP16 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MHCAIQKAEALDGNHLMQILWNDGTESLYPAVWLRDNCQCSDCYLDSAKARKLLLETLDVNIGI
KDLEFDKKKVNITWPNEHCSEFEADWLKKRCFSRKARAKLQEELFLPERQYWGSELQLPTLSFE
DVLKNDEHAYKWLSSLKKVGIVRLTGASNKRGEVTKLGKRIGFLYLTFYGHTWQVQDKIDANNV
AYTTGKLSFHTDYPALHHPPGVQLLHCIKQTVTGGDSEIVDGFNVCQKLKEKNPRAFQILSSTF
VDFTDIGVDYCDFSVQSKHKIIELDDKGQVVRINFNNATRDTIFDVPVERVQPFYAALKEFVDL
MNSKENKFIFKMNPGDVITFDNWRLLHGRRGYEAGTEITRHLEGAYADWDVVMSRLRILRQGVA
NGN

hide sequence

RefSeq Acc Id:	XP_040140520 ⟸ XM_040284586
- UniProtKB:	I3MP16 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040140522 ⟸ XM_040284588
- UniProtKB:	I3MP16 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040140521 ⟸ XM_040284587
- UniProtKB:	I3MP16 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000032466 ⟸ ENSSTOT00000032873

Ensembl Acc Id:

ENSSTOP00000013469 ⟸ ENSSTOT00000015032

Protein Domains

Gamma-butyrobetaine hydroxylase-like N-terminal TauD/TfdA-like

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000015028	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000015032.3	UniProtKB/TrEMBL
	ENSSTOT00000032873.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.2020.30	UniProtKB/TrEMBL
	3.60.130.10	UniProtKB/TrEMBL
InterPro	AlphaKG_dependent_hydroxylases	UniProtKB/TrEMBL
	GBBH	UniProtKB/TrEMBL
	GBBH-like_N	UniProtKB/TrEMBL
	GBBH-like_N_sf	UniProtKB/TrEMBL
	TauD-like_sf	UniProtKB/TrEMBL
	TauD/TfdA-like	UniProtKB/TrEMBL
NCBI Gene	Bbox1	ENTREZGENE
PANTHER	GAMMA-BUTYROBETAINE DIOXYGENASE	UniProtKB/TrEMBL
	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	UniProtKB/TrEMBL
Pfam	GBBH-like_N	UniProtKB/TrEMBL
	TauD	UniProtKB/TrEMBL
Superfamily-SCOP	Clavaminate synthase-like	UniProtKB/TrEMBL
UniProt	I3MP16	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - SMPDB