Advanced Search (OLGA)

Gene: Syt12 (synaptotagmin 12) Ictidomys tridecemlineatus

Analyze

Symbol:

Syt12

Name:

synaptotagmin 12

RGD ID:

12609399

Description:

ENCODES a protein that exhibits calcium ion binding (inferred); calcium-dependent phospholipid binding (inferred); clathrin binding (inferred); INVOLVED IN spontaneous exocytosis of neurotransmitter (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); intellectual disability (ortholog); Recurrent Infections, with Encephalopathy, Hepatic Dysfunction, and Cardiovascular Malformations (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); presynapse (ortholog); synaptic vesicle membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

synaptotagmin 12, transcript variant X1; synaptotagmin 12, transcript variant X2; synaptotagmin-12

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SYT12 (synaptotagmin 12)	NCBI	Ortholog
Mus musculus (house mouse):	Syt12 (synaptotagmin XII)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Syt12 (synaptotagmin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Syt12 (synaptotagmin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SYT12 (synaptotagmin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SYT12 (synaptotagmin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SYT12 (synaptotagmin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SYT12 (synaptotagmin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Syt12 (synaptotagmin 12)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	6,176,026 - 6,195,017 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936599	2,615,075 - 2,637,422 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936599	2,617,083 - 2,637,355 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aicardi-Goutieres Syndrome 3 (ISO)

intellectual disability (ISO)

Recurrent Infections, with Encephalopathy, Hepatic Dysfunction, and Cardiovascular Malformations (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcium ion-regulated exocytosis of neurotransmitter (IEA)

long-term synaptic potentiation (IEA)

presynaptic modulation of chemical synaptic transmission (IEA)

spontaneous exocytosis of neurotransmitter (ISO)

synaptic vesicle endocytosis (IEA)

Cellular Component

exocytic vesicle (IEA)

hippocampal mossy fiber to CA3 synapse (IEA,ISO)

membrane (IEA)

plasma membrane (IEA)

presynapse (ISO)

synaptic vesicle (IEA)

synaptic vesicle membrane (IEA,ISO)

Molecular Function

calcium ion binding (IEA)

calcium-dependent phospholipid binding (IEA)

clathrin binding (IEA)

phosphatidylserine binding (IEA)

protein binding (ISO)

SNARE binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Syt12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	6,176,026 - 6,195,017 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936599	2,615,075 - 2,637,422 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936599	2,617,083 - 2,637,355 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SYT12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	67,006,771 - 67,050,863 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	67,006,778 - 67,050,863 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	66,790,264 - 66,818,334 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	66,547,467 - 66,574,906 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	66,547,466 - 66,574,905	NCBI
Celera	11	64,118,713 - 64,146,930 (+)	NCBI		Celera
Cytogenetic Map	11	q13.2	NCBI
HuRef	11	63,117,876 - 63,146,182 (+)	NCBI		HuRef
CHM1_1	11	66,673,196 - 66,701,341 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	67,001,256 - 67,045,338 (+)	NCBI		T2T-CHM13v2.0

Syt12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	4,495,936 - 4,527,171 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	4,495,936 - 4,527,475 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	4,445,908 - 4,477,143 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	4,445,908 - 4,477,447 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	4,445,908 - 4,477,143 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	4,445,908 - 4,477,143 (-)	NCBI		MGSCv36	mm8
Celera	19	4,316,249 - 4,347,461 (-)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	4.07	NCBI

Syt12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	211,158,745 - 211,189,780 (-)	NCBI		GRCr8
mRatBN7.2	1	201,729,307 - 201,760,192 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	201,730,371 - 201,759,609 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	210,082,766 - 210,112,208 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	217,175,770 - 217,205,036 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	209,866,790 - 209,896,058 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	219,690,013 - 219,719,359 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	219,688,451 - 219,719,272 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	226,557,944 - 226,587,017 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	207,021,672 - 207,073,026 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	207,175,131 - 207,226,479 (-)	NCBI
Celera	1	199,274,610 - 199,303,297 (-)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

Syt12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	18,357,025 - 18,374,621 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	18,359,105 - 18,381,312 (-)	NCBI	ChiLan1.0	ChiLan1.0

SYT12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	68,251,939 - 68,280,888 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	69,294,590 - 69,323,603 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	62,383,485 - 62,412,451 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	65,686,485 - 65,733,010 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	65,709,808 - 65,733,010 (+)	Ensembl	panpan1.1		panPan2

SYT12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	50,334,779 - 50,358,113 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	50,336,042 - 50,351,333 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	48,945,117 - 48,967,963 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	51,285,508 - 51,308,358 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	51,283,724 - 51,301,790 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	50,469,616 - 50,492,451 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	50,044,340 - 50,067,184 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	50,839,332 - 50,862,180 (-)	NCBI		UU_Cfam_GSD_1.0

SYT12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	5,410,627 - 5,433,926 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	5,410,605 - 5,434,492 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	4,385,504 - 4,409,321 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SYT12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	7,222,090 - 7,248,406 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	7,221,220 - 7,248,489 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	104,512,047 - 104,540,131 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Syt12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	19,412,359 - 19,436,931 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	19,412,314 - 19,436,939 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005333360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013361961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040284038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000011499 ⟹ ENSSTOP00000010320

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936599	2,615,075 - 2,637,422 (-)	Ensembl

RefSeq Acc Id:

XM_005333360 ⟹ XP_005333417

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	6,176,026 - 6,195,017 (-)	NCBI
SpeTri2.0	NW_004936599	2,617,083 - 2,637,355 (-)	NCBI

Sequence:

show sequence

GCCCGGACTGCGGCGCAGCTCCCGTCCGTCCGCTGCCCCGGCCCGGCAGAGCCCCCGACCCGCA
CCGCGCTGCTCTGAGGCGGGCGCCAGGAGACACTGCAGGGGTGGCGTTGCCGCGGGCTGCCGGG
CTTGGCGCCGGTGCGTGCGCTGCTGCAGGAAGCCGGCCGGGACCGGGAGCCAGAGTCAGCCCCA
GGCAGAGCGGCGGCCCCTCGGTTCCAGCCACTGCAGGGGCATCATGGCCGTGGATGTGGCCGAC
GTGGCAGAATACCACCTGAGCGTCATCAAGAGCCCCCCTGGCTGGGAGGTGGGAGTCTACGCTG
CAGGGGCCCTGGCCCTGCTGGGAATCGCAGCTGTGAGCCTGTGGAAGCTCTGGACATCGGGCAG
CTTCCCCAGCCCCTCCCCATTCCCAAATTATGACTACAGGTACCTTCAGCAGAAGTATGGCGAG
ACCTCCGCGGAGGCCAGGCCAAAGACAATGCCTGCCTGGAACACCCAGCGGGCCAGGACTCGGG
GACCACCCAGTCGCAAGGGCAGCCTCAGCATCGAGGACAACTTTGAGGCCATCAGTGAGCTGGG
GCCGTTGGAGCTGATGGGCCGCGAGCTGGACCTGGCCCCCTATGGGACCCTCCGGAAATCCCAG
TCGGCCGACTCCCTGAACTCCATCTCCTCCGTGAGCAACACCTTCGGGCAGGACTTCACGCTGG
GCCAGGTGGAGGTGAGCATGGACTACGACCCAGCCTCCCACACCCTCCACGTGGCCGTGCTGCA
GGGCAAGGACCTCCTGGAGCGCGAGGAAGCCAGCTTCGAGTCCTGCTTCATGCGCGTGAGCCTG
CTGCCCGACGAGCAGATCGTGGGCATTTCCAGGATCCAGAGGAATGCCTACTCCATCTTCTTCG
ATGAGAAGTTCTCCATTCCGCTGGATCCCACGGCCCTGGAGGAGAAGAGCCTGCGGTTTTCCGT
GTTTGGCATTGACGAGGACGAGAGGAACGTCAGCACCGGGGTGGTAGAGCTGAAGCTCTCGGTA
CTGGACCTGCCCCTGCAGCCCTTCAGCGGCTGGCTCTACTTACAGGACCAGAACAAGGCTGCTG
ACGCAGTGGGAGAGATCCTGCTATCCCTCAGCTACCTGCCCACAGCTGAGCGCCTCACCGTGGT
GGTGGTAAAGGCCAAGAATCTTATCTGGACCAACGACAAGACCACAGCAGACCCCTTTGTGAAG
GTGTACCTGCTACAGGATGGGAGGAAGATGAGCAAGAAGAAGACAGCCGTGAAGAGAGATGACC
CCAACCCAGTGTTCAATGAAGCCATGATCTTCTCGGTGCCAGCCATTGTGCTCCAGGACCTATC
TCTCCGTGTGACGGTGGCTGAGAGCAGCAGTGACGGCCGTGGGGACAACGTGGGCCACGTTATC
ATCGGGCCATCAGCCAGTGGCATGGGCACCACACACTGGAACCAGATGCTGGCCACACTGCGCA
GGCCTGTGTCCATGTGGCACCCTGTCCGGCGAAACTAGCAGCCAGGGCAGGCCAGGCGGACGGC
GGAGCCTCTAGAGCCTGGTGCCCACTCGCTCTATCCAATGCCCTCTCCATTGACCAACTGGAGC
TGCGGACACTGGGGTACCCCGGGGGAGTCCCCATCAGCCAACTTGGACCCTCTGTCTGGGAACC
CAGGTTCTTCTGCTGCAGACCAGCTATGGCTGGGCCGGGTCCCAGAGGGGGCAGCTGACACTGG
CCAATTGTGCACCACCTCCAGATCCTCATGAGGCCTGTCCTTGGTGTGCAGGGACTTGGCCTCT
CAGAGCTGGCAAGCCCCACCCCCACCTCCTGGGAGGCCAGTGACAAGCAGTGACAAGCAGTGCA
GTGGGGGCCAGACACTGTGCTAGGAACTGGCAGGGGAAACACGAACAAGACACAGGTCCCTGGG
CCGTCAGGAAGTCAAAATCCCCCTGCCCCAGGTAATCTGCCCAGTGCCAAATAACAGCAGGCTC
TTGGGAAGAGGCTCCTGGGGCTGGGGAACTTGGAGGGCCTCTTAGACAAGGAAGGAGCTGCACT
TAGGGGTAGGAGCAGCCTGAGTGTCTCAGGCAGGGGGCACTGCAAGGCACTGCAAGGACAGGAA
CTTCCCATCACAAACTTGGTTCTCAGCCCCCTGCTGGGCAACAGGGGCCTCTCTGGGGACTGTA
GAAGAGACCCAGAGACCAGGTCCAAACCGAAGTCTATGGGCCAAATGGAGGCTCCAGGATTATT
CTCTGTGAAATCTCCTTCCCTTTATCCTCATCCACTGCAGGAGCCAGAGGTCCACAGACACCCA
GACCCAGGTCCTTGGGCTGCTCCCATGCAAATCAGCCATTGGATCCAGATGTTTGCTGGTGTCC
TTCAGCGTGGGCCCTGTGGGGAAGAGAGATGCTTTAGGTAGCCTGGTTCCCACGCCCAGACTAC
TGGGCATCCCGGCTCAAGCTCCCCAACACTGTGGCTTCAGGAATCATCCAGTCGCAGCCTGTTG
GCTGGGGAAGCTCTGGAGGGAGGAGTGGCACCCCCAACCCGGGGTCCTGTCCAGAAGCAAAGGG
ACTGGGCTGCTACATCCCCAGGTGCAGTGAGGGTGTCCTGCCCCTCCCAGTGTCACAGGATGAG
GAGGCAGCTCTGCAGCTTTAAAGGGATGACTGGGGGCAGAGTGGTCAGGGTACAGAGCTGCAGT
GCCATCTCTGAAGCCACCCTCAGATGACAGGGGCACTGCCTCTTCCTTAGCCCTGGTGAGCTGT
GGAGACCCAGGTCCAACCAGCTACTGCTGATGACATGGAGGTAGGAGTGGCTAGAACAGTGCCC
AGAAGGGTCATGGGCTGGAGGCAGGACCCACTTAACACAACCAGGACCCAGCCTGAGGCCAGGC
TGTCCACCCTTGGCCAGCACCACAGGGCCAGGGGACACACCCCCTGGCGTTGCAGTGCAGGCTA
TGTATTCCCACCTGCTCCTTCCCCCTCTATCCTCCTTCTAACTGCATGACATGTGGACTGTGTA
CCCAGGTGGCCATGGTGGCAATGGAGAATGCTGACTGGAATGATTCTAGAACCAAAATAAAGCT
GGGGCAGGAAGCAGGGCATCCAGGGAGCCCTGCCTGGCCCCAAATCACCTTCGTCTCTTCTGCA
GGAA

hide sequence

RefSeq Acc Id:

XM_040284038 ⟹ XP_040139972

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	6,176,026 - 6,195,007 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005333417	(Get FASTA)	NCBI Sequence Viewer
	XP_040139972	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000010320.3
GenBank Protein	KAG3284588	(Get FASTA)	NCBI Sequence Viewer
	KAG3284589	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005333417 ⟸ XM_005333360
- Peptide Label:	isoform X1
- UniProtKB:	I3MHG1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAVDVADVAEYHLSVIKSPPGWEVGVYAAGALALLGIAAVSLWKLWTSGSFPSPSPFPNYDYRY LQQKYGETSAEARPKTMPAWNTQRARTRGPPSRKGSLSIEDNFEAISELGPLELMGRELDLAPY GTLRKSQSADSLNSISSVSNTFGQDFTLGQVEVSMDYDPASHTLHVAVLQGKDLLEREEASFES CFMRVSLLPDEQIVGISRIQRNAYSIFFDEKFSIPLDPTALEEKSLRFSVFGIDEDERNVSTGV VELKLSVLDLPLQPFSGWLYLQDQNKAADAVGEILLSLSYLPTAERLTVVVVKAKNLIWTNDKT TADPFVKVYLLQDGRKMSKKKTAVKRDDPNPVFNEAMIFSVPAIVLQDLSLRVTVAESSSDGRG DNVGHVIIGPSASGMGTTHWNQMLATLRRPVSMWHPVRRN hide sequence

RefSeq Acc Id:	XP_040139972 ⟸ XM_040284038
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSSTOP00000010320 ⟸ ENSSTOT00000011499

Protein Domains

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000011498	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000011499.3	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.150	UniProtKB/TrEMBL
InterPro	C2_dom	UniProtKB/TrEMBL
	C2_domain_sf	UniProtKB/TrEMBL
	SYT12	UniProtKB/TrEMBL
NCBI Gene	Syt12	ENTREZGENE
PANTHER	PTHR10024:SF252	UniProtKB/TrEMBL
	SYNAPTOTAGMIN	UniProtKB/TrEMBL
Pfam	PF00168	UniProtKB/TrEMBL
PROSITE	PS50004	UniProtKB/TrEMBL
SMART	SM00239	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49562	UniProtKB/TrEMBL
UniProt	I3MHG1	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar