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Gene: Rab9a (RAB9A, member RAS oncogene family) Ictidomys tridecemlineatus

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Symbol:

Rab9a

Name:

RAB9A, member RAS oncogene family

RGD ID:

12594944

Description:

ENCODES a protein that exhibits G protein activity (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN positive regulation of exocytosis (inferred); protein transport (inferred); Rab protein signal transduction (inferred); ASSOCIATED WITH autistic disorder (ortholog); Joubert syndrome 1 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasmic vesicle (inferred); cytoplasmic vesicle membrane (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ras-related protein Rab-9A

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	3,253,617 - 3,275,081 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	3,253,652 - 3,275,075 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	3,253,631 - 3,275,078 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab9a	Squirrel	autistic disorder		ISO	RGD:1350613	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106\|PMID:30208311
Rab9a	Squirrel	Joubert syndrome 1		ISO	RGD:1350613	8554872	ClinVar Annotator: match by term: Familial aplasia of the vermis	ClinVar	PMID:11349230\|PMID:16783569\|PMID:18546297\|PMID:23033313\|PMID:27081566\|PMID:28492532
Rab9a	Squirrel	Neurodevelopmental Disorders		ISO	RGD:1350613	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab9a	Squirrel	positive regulation of exocytosis	involved_in	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	protein transport	involved_in	IEA	UniProtKB-KW:KW-0653	150520179		UniProt	GO_REF:0000043
Rab9a	Squirrel	Rab protein signal transduction	involved_in	IEA	InterPro:IPR041824	150520179		InterPro	GO_REF:0000002
Rab9a	Squirrel	receptor-mediated endocytosis	involved_in	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	regulation of protein localization	involved_in	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	retrograde transport, endosome to Golgi	involved_in	IEA	PANTHER:PTN000635737	150520179		TreeGrafter	GO_REF:0000118

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab9a	Squirrel	cytoplasmic vesicle	located_in	IEA	UniProtKB-KW:KW-0968	150520179		UniProt	GO_REF:0000043
Rab9a	Squirrel	cytoplasmic vesicle membrane	located_in	IEA	UniProtKB:Q9R0M6\|ensembl:ENSMUSP00000123325	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	cytosol	located_in	IEA	GO:0042147	150520179		GOC	GO_REF:0000108
Rab9a	Squirrel	late endosome	located_in	IEA	PANTHER:PTN000635737	150520179		TreeGrafter	GO_REF:0000118
Rab9a	Squirrel	late endosome	located_in	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	lysosome	located_in	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	lysosome	located_in	IEA	PANTHER:PTN000635737	150520179		TreeGrafter	GO_REF:0000118
Rab9a	Squirrel	melanosome	located_in	IEA	UniProtKB:Q9R0M6\|ensembl:ENSMUSP00000123325	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	phagocytic vesicle	located_in	IEA	PANTHER:PTN000635737	150520179		TreeGrafter	GO_REF:0000118
Rab9a	Squirrel	phagocytic vesicle	located_in	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	phagocytic vesicle membrane	located_in	IEA	UniProtKB-SubCell:SL-0205	150520179		UniProt	GO_REF:0000044
Rab9a	Squirrel	plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0039	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Rab9a	Squirrel	G protein activity	enables	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	GDP binding	enables	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	GTP binding	enables	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	GTP binding	enables	IEA	UniProtKB-KW:KW-0342	150520179		UniProt	GO_REF:0000043
Rab9a	Squirrel	GTP binding	enables	IEA	InterPro:IPR001806\|InterPro:IPR005225	150520179		InterPro	GO_REF:0000002
Rab9a	Squirrel	GTPase activity	enables	IEA	InterPro:IPR001806\|InterPro:IPR041824	150520179		InterPro	GO_REF:0000002
Rab9a	Squirrel	GTPase activity	enables	IEA	UniProtKB:P51151\|ensembl:ENSP00000420127	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	identical protein binding	enables	IEA	UniProtKB:Q9R0M6\|ensembl:ENSMUSP00000123325	150520179		Ensembl	GO_REF:0000107
Rab9a	Squirrel	nucleotide binding	enables	IEA	UniProtKB-KW:KW-0547	150520179		UniProt	GO_REF:0000043
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q9NQG7	9068941	PMID:20048159	UniProt	PMID:20048159
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q99KG7	9068941	PMID:20048159	UniProt	PMID:20048159
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:O43147\|UniProtKB:Q99KG7	9068941	PMID:26620560	UniProt	PMID:26620560
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q8BPQ7	9068941	PMID:25220469	UniProt	PMID:25220469
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q8IWJ2	9068941	PMID:16885419	UniProt	PMID:16885419
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q9Y2I1	9068941	PMID:23386062, PMID:29568061	IntAct	PMID:23386062\|PMID:29568061
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q9UJC3	9068941	PMID:15471887	UniProt	PMID:15471887
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q8IWJ2	9068941	PMID:18243103	UniProt	PMID:18243103
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q2NKQ1	9068941	PMID:22637480	UniProt	PMID:22637480
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:O43147	9068941	PMID:21808068	UniProt	PMID:21808068
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q8IWE5	9068941	PMID:18787122	AgBase	PMID:18787122
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:Q8BPQ7-1	9068941	PMID:25220469	IntAct	PMID:25220469
Rab9a	Squirrel	protein binding	enables	ISO	UniProtKB:O94955	9068941	PMID:19490898	IntAct	PMID:19490898

PMID:22301074	PMID:30032202

Rab9a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	3,253,617 - 3,275,081 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	3,253,652 - 3,275,075 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	3,253,631 - 3,275,078 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAB9A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	13,689,128 - 13,710,504 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	13,689,128 - 13,710,504 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	13,707,247 - 13,728,623 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	13,617,262 - 13,637,685 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	13,466,997 - 13,487,419	NCBI
Celera	X	17,824,420 - 17,844,845 (+)	NCBI		Celera
Cytogenetic Map	X	p22.2	NCBI
HuRef	X	11,465,760 - 11,486,461 (+)	NCBI		HuRef
CHM1_1	X	13,738,054 - 13,758,769 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	13,270,511 - 13,291,900 (+)	NCBI		T2T-CHM13v2.0

Rab9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	165,240,247 - 165,262,863 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	165,240,249 - 165,262,863 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	166,457,251 - 166,479,867 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	166,457,253 - 166,479,867 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	162,895,191 - 162,917,626 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	161,801,364 - 161,823,801 (-)	NCBI		MGSCv36	mm8
Celera	X	149,637,081 - 149,659,269 (-)	NCBI		Celera
Cytogenetic Map	X	F5	NCBI
cM Map	X	77.47	NCBI

Rab9a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	31,610,089 - 31,632,128 (+)	NCBI		GRCr8
mRatBN7.2	X	27,955,552 - 28,009,870 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	27,952,204 - 28,001,622 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	29,012,705 - 29,035,018 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	32,448,112 - 32,470,155 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	28,627,346 - 28,649,660 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	29,525,256 - 29,547,295 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	29,525,256 - 29,547,294 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	29,918,170 - 29,940,588 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	48,663,349 - 48,686,805 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	X	48,716,817 - 48,740,273 (+)	NCBI
Celera	X	28,350,514 - 28,373,237 (+)	NCBI		Celera
Cytogenetic Map	X	q13	NCBI

Rab9a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955519	4,489,159 - 4,496,089 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955519	4,489,159 - 4,496,089 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAB9A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	15,468,636 - 15,489,406 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	15,472,402 - 15,493,711 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	6,296,483 - 6,317,826 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	13,564,061 - 13,605,532 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	13,604,454 - 13,605,059 (+)	Ensembl	panpan1.1		panPan2

RAB9A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	10,072,764 - 10,124,620 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	10,102,387 - 10,124,620 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	10,076,908 - 10,099,141 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	10,030,636 - 10,082,741 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	10,060,425 - 10,082,739 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	10,129,115 - 10,151,347 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	10,120,485 - 10,142,705 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	10,146,433 - 10,169,013 (+)	NCBI		UU_Cfam_GSD_1.0

RAB9A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	10,293,757 - 10,349,387 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	10,328,085 - 10,349,399 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	11,281,830 - 11,303,135 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAB9A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	12,181,447 - 12,202,778 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	12,201,049 - 12,201,651 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666056	13,995,783 - 14,017,753 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rab9a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624882	435,879 - 463,069 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624882	435,877 - 489,691 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005315973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013356221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040288483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040288520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040288570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040288611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000021118 ⟹ ENSSTOP00000016920

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936470	3,253,652 - 3,275,075 (+)	Ensembl

RefSeq Acc Id:

XM_005315973 ⟹ XP_005316030

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	3,253,620 - 3,275,081 (+)	NCBI
SpeTri2.0	NW_004936470	3,253,631 - 3,275,078 (+)	NCBI

Sequence:

show sequence

TCGCCATGTTTTTCCCTCCGCCCTGGACCGAGCCTCTGGAGCTGGAGTCGGGTAGCACTGCTGCTGCTGCCGCCTCTTGCCCGCTTAGACCTCGACCCTCTTTCTGCCTTCCTTGCATCCAGGCGAGC
CGGCTTTGAGCTCCCAGGGTGTTCTCCGTGTGGTCGCAAGGTAATGATGCTTGAATTGAACTTCTACTAAGGGTTCTGAAGTCAAAACTTGTAAGATTAACAATGGCAGGAAAATCATCGCTTTTTAA
AGTAATTCTCCTGGGAGATGGTGGAGTTGGGAAGAGTTCCCTTATGAACAGATATGTAACTAATAAGTTTGATGCCCAGCTCTTCCATACAATAGGTGTGGAATTTTTAAACAAAGAGTTGGAGGTGG
ATGGACATTTTGTTACCATGCAGATTTGGGACACAGCTGGCCAAGAGCGATTCCGAAGCCTGAGGACACCATTTTACAGAGGTTCTGACTGTTGCCTGCTCACTTTTAGTGTTGATGATTCACAGAGC
TTCCAGAACTTGGGTAACTGGAAGAAAGAATTCATATATTATGCAGAGGTAAAAGAGCCCGAAAGTTTTCCTTTTGTGATTTTAGGCAACAAGATCGACATAAATGAGCGGCAGGTGTCCACTGAAGA
AGCCCAAGCCTGGTGCAGAGAGAACGGCGACTATCCTTACTTTGAAACAAGTGCAAAAGATGCCACCAATGTTGCAGCAGCCTTTGAGGAAGCGGTTCGAAGAGTTCTTGCTAACGAGGATAGGTCAG
ATCATTTGATTCAGACAGACACGGTCCATCTCCACCGAAAGCCCAAGACAAGCTCATCTTGCTGTTGATTGTTAGATTATCAGTGCGTTCTAACCAATTCATACATGCACTTAAGAGTGGATAAGAGA
ATTAGTGTTTGCAGCAGTGTATCATCTACTAATAAATTTCAACTAATGTTTATTGCTGCTTCATTAGTTGGTGGGAGAAGGGACACATCCATTCTGGAGGAAATCTATTTACTCAATAATGGCACCTT
ACATTTATAAATTGTAATGGTTGCCTAATAATGTTTCTTTAATTTAAATATGTAAGTTAGAGCTAATAAATAAGATGACCACAATTGTAACTAATTAAAACAAAAAACTTGACTATTCTAGAAGTTAT
ACTTGGATTGTTCTGTGCCTGTCCCCTGCCCCCCCCCCCCGGGAAAATGGAGAACTACTTTTTATACCTGTATATTTTTATGTAATTAGCATTGTATTCTTGGTTCAGGGAAATGACTTCCTAAAGCA
ATAATGTTAAATATTAAAGATTAAAATCTAATGCATTTACA

hide sequence

RefSeq Acc Id:

XM_013356221 ⟹ XP_013211675

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	3,253,619 - 3,275,081 (+)	NCBI
SpeTri2.0	NW_004936470	3,253,631 - 3,275,075 (+)	NCBI

Sequence:

show sequence

TCGCCATGTTTTTCCCTCCGCCCTGGACCGAGCCTCTGGAGCTGGAGTCGGGTAGCACTGCTGC
TGCTGCCGCCTCTTGCCCGCTTAGACCTCGACCCTCTTTCTGCCTTCCTTGCATCCAGGCGAGCCGGCTTTGAGCTCCCAGGGTGTTCTCCGTGTGGTCGCAAGGTAATGATGCTTGAATTGAACTTC
TACTAAGGTTGCTTGGGGCCTTGCTTGAGGCTGGCTTTGAACTCGCAAACCTCCTGCCTCAGCCTCCTGAATCGCTGGGATTACAGGGTTCTGAAGTCAAAACTTGTAAGATTAACAATGGCAGGAAA
ATCATCGCTTTTTAAAGTAATTCTCCTGGGAGATGGTGGAGTTGGGAAGAGTTCCCTTATGAACAGATATGTAACTAATAAGTTTGATGCCCAGCTCTTCCATACAATAGGTGTGGAATTTTTAAACA
AAGAGTTGGAGGTGGATGGACATTTTGTTACCATGCAGATTTGGGACACAGCTGGCCAAGAGCGATTCCGAAGCCTGAGGACACCATTTTACAGAGGTTCTGACTGTTGCCTGCTCACTTTTAGTGTT
GATGATTCACAGAGCTTCCAGAACTTGGGTAACTGGAAGAAAGAATTCATATATTATGCAGAGGTAAAAGAGCCCGAAAGTTTTCCTTTTGTGATTTTAGGCAACAAGATCGACATAAATGAGCGGCA
GGTGTCCACTGAAGAAGCCCAAGCCTGGTGCAGAGAGAACGGCGACTATCCTTACTTTGAAACAAGTGCAAAAGATGCCACCAATGTTGCAGCAGCCTTTGAGGAAGCGGTTCGAAGAGTTCTTGCTA
ACGAGGATAGGTCAGATCATTTGATTCAGACAGACACGGTCCATCTCCACCGAAAGCCCAAGACAAGCTCATCTTGCTGTTGATTGTTAGATTATCAGTGCGTTCTAACCAATTCATACATGCACTTA
AGAGTGGATAAGAGAATTAGTGTTTGCAGCAGTGTATCATCTACTAATAAATTTCAACTAATGTTTATTGCTGCTTCATTAGTTGGTGGGAGAAGGGACACATCCATTCTGGAGGAAATCTATTTACT
CAATAATGGCACCTTACATTTATAAATTGTAATGGTTGCCTAATAATGTTTCTTTAATTTAAATATGTAAGTTAGAGCTAATAAATAAGATGACCACAATTGTAACTAATTAAAACAAAAAACTTGAC
TATTCTAGAAGTTATACTTGGATTGTTCTGTGCCTGTCCCCTGCCCCCCCCCCCCGGGAAAATGGAGAACTACTTTTTATACCTGTATATTTTTATGTAATTAGCATTGTATTCTTGGTTCAGGGAAA
TGACTTCCTAAAGCAATAATGTTAAATATTAAAGATTAAAATCTAATGCATTT

hide sequence

RefSeq Acc Id:

XM_040288483 ⟹ XP_040144417

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	3,255,266 - 3,275,081 (+)	NCBI

RefSeq Acc Id:

XM_040288520 ⟹ XP_040144454

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	3,253,619 - 3,275,081 (+)	NCBI

RefSeq Acc Id:

XM_040288570 ⟹ XP_040144504

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	3,269,439 - 3,275,081 (+)	NCBI

RefSeq Acc Id:

XM_040288611 ⟹ XP_040144545

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	X	3,253,617 - 3,275,076 (+)	NCBI


Protein RefSeqs	XP_005316030	(Get FASTA)	NCBI Sequence Viewer
	XP_013211675	(Get FASTA)	NCBI Sequence Viewer
	XP_040144417	(Get FASTA)	NCBI Sequence Viewer
	XP_040144454	(Get FASTA)	NCBI Sequence Viewer
	XP_040144504	(Get FASTA)	NCBI Sequence Viewer
	XP_040144545	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000016920.2

RefSeq Acc Id:	XP_005316030 ⟸ XM_005315973
- Peptide Label:	isoform X1
- UniProtKB:	I3MXS5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYAEVKEPESFPFVILGNKIDI NERQVSTEEAQAWCRENGDYPYFETSAKDATNVAAAFEEAVRRVLANEDRSDHLIQTDTVHLHRKPKTSSSCC hide sequence

RefSeq Acc Id:	XP_013211675 ⟸ XM_013356221
- Peptide Label:	isoform X1
- UniProtKB:	I3MXS5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYAEVKEPESFPFVILGNKIDI NERQVSTEEAQAWCRENGDYPYFETSAKDATNVAAAFEEAVRRVLANEDRSDHLIQTDTVHLHRKPKTSSSCC hide sequence

RefSeq Acc Id:	XP_040144545 ⟸ XM_040288611
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_040144454 ⟸ XM_040288520
- Peptide Label:	isoform X1
- UniProtKB:	I3MXS5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040144417 ⟸ XM_040288483
- Peptide Label:	isoform X1
- UniProtKB:	I3MXS5 (UniProtKB/TrEMBL)

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000024550	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000021118.2	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/TrEMBL
	Rab9	UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/TrEMBL
NCBI Gene	Rab9a	ENTREZGENE
PANTHER	RAB FAMILY	UniProtKB/TrEMBL
	RAS-RELATED PROTEIN RAB-9A	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
SMART	RAB	UniProtKB/TrEMBL
	RAN	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	I3MXS5	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar